Pregenerated sensors for OAZ3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028141Ensembl transcript IDs: ENSMUST00000191506.8, ENSMUST00000199678.4, ENSMUST00000203883.3, ENSMUST00000204548.2, ENSMUST00000204913.3, ENSMUST00000204980.3
Found 79 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGCCTCAGAGTCCCGTGTGTTGAGGTTTCCAACCCCTCACAGAGATaGAACATGTTTAGGGAGGCTCACTGGCCAGGGTGGCCAAGGTCC | + |
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Preference number: 1 (lower is better) Translates to: GLRVPCVEVSNPSQR*NMFREAHWPGWPRS Trigger: GGACCTTGGCCACCCTGGCCAGTGAGCCTCCCTAAACATGTTCCATCTCTGTGAGGGGTTGGAAACCTCAACACACGGGACTCTGAGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000204548.2 ENSMUST00000204913.3 ENSMUST00000204980.3 |
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| 3UTR CCA 90 bp | GTTTCCAACCCCTCACAGAGATGGAACATGTTTAGGGAGGCTCACTaGCCAGGGTGGCCAAGGTCCCTTTCAAGGGGATACACCATGAAG | + |
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Preference number: 1 (lower is better) Translates to: VSNPSQRWNMFREAH*PGWPRSLSRGYTMK Trigger: CTTCATGGTGTATCCCCTTGAAAGGGACCTTGGCCACCCTGGCCAGTGAGCCTCCCTAAACATGTTCCATCTCTGTGAGGGGTTGGAAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000204548.2 ENSMUST00000204913.3 ENSMUST00000204980.3 |
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| 3UTR CCA 90 bp | CCCTCACAGAGATGGAACATGTTTAGGGAGGCTCACTGGCCAGGGTaGCCAAGGTCCCTTTCAAGGGGATACACCATGAAGATGACATTG | + |
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Preference number: 1 (lower is better) Translates to: PSQRWNMFREAHWPG*PRSLSRGYTMKMTL Trigger: CAATGTCATCTTCATGGTGTATCCCCTTGAAAGGGACCTTGGCCACCCTGGCCAGTGAGCCTCCCTAAACATGTTCCATCTCTGTGAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000204548.2 ENSMUST00000204913.3 ENSMUST00000204980.3 |
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| 3UTR GCA 90 bp | TTCCTCCAACAGTCCCTCCCACCAAGAAACAGCAAACGCTTTGATTaGACTACCCTTTATTTCCTAGGATGGAAGTATCTTAAATCACAT | + |
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Preference number: 1 (lower is better) Translates to: FLQQSLPPRNSKRFD*TTLYFLGWKYLKSH Trigger: ATGTGATTTAAGATACTTCCATCCTAGGAAATAAAGGGTAGTGCAATCAAAGCGTTTGCTGTTTCTTGGTGGGAGGGACTGTTGGAGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191506.8 |
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| 3UTR-3UTR TCA 90 bp | GCCAGGGTGGCCAAGGTCCCTTTCAAGGGGATACACCATGAAGATGACATTGTCGGAGGGAGGGCAGGATaGTCTGGTCTAACCACCTCG | + |
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Preference number: 2 (lower is better) Translates to: ARVAKVPFKGIHHEDDIVGGRAG*SGLTTS Trigger: CGAGGTGGTTAGACCAGATCATCCTGCCCTCCCTCC...GACAATGTCATCTTCATGGTGTATCCCCTTGAAAGGGACCTTGGCCACCCTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000204548.2 ENSMUST00000204913.3 ENSMUST00000204980.3 |
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| 3UTR CCA 72 bp | CCCTCACAGAGATGGAACATGTTTAGGGAGGCTCACTaGCCAGGGTGGCCAAGGTCCCTTTCAAGGGGATAC | + |
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Preference number: 3 (lower is better) Translates to: PSQRWNMFREAH*PGWPRSLSRGY Trigger: GTATCCCCTTGAAAGGGACCTTGGCCACCCTGGCCAGTGAGCCTCCCTAAACATGTTCCATCTCTGTGAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000204548.2 ENSMUST00000204913.3 ENSMUST00000204980.3 |
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| 3UTR CCA 72 bp | GTCCCGTGTGTTGAGGTTTCCAACCCCTCACAGAGATaGAACATGTTTAGGGAGGCTCACTGGCCAGGGTGG | + |
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Preference number: 3 (lower is better) Translates to: VPCVEVSNPSQR*NMFREAHWPGW Trigger: CCACCCTGGCCAGTGAGCCTCCCTAAACATGTTCCATCTCTGTGAGGGGTTGGAAACCTCAACACACGGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000204548.2 ENSMUST00000204913.3 ENSMUST00000204980.3 |
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| 3UTR CCA 72 bp | AGATGGAACATGTTTAGGGAGGCTCACTGGCCAGGGTaGCCAAGGTCCCTTTCAAGGGGATACACCATGAAG | + |
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Preference number: 3 (lower is better) Translates to: RWNMFREAHWPG*PRSLSRGYTMK Trigger: CTTCATGGTGTATCCCCTTGAAAGGGACCTTGGCCACCCTGGCCAGTGAGCCTCCCTAAACATGTTCCATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000204548.2 ENSMUST00000204913.3 ENSMUST00000204980.3 |
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| 3UTR-3UTR CAA 90 bp | GTGTTGAGGTTTCCAACCCCTCACAGAGATGGAACATGTTTAGGGAGGCTCACTACCATGAAGATGACATaGTCCCAGGGAGGGAGGGCA | + |
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Preference number: 3 (lower is better) Translates to: VLRFPTPHRDGTCLGRLTTMKMT*SQGGRA Trigger: TGCCCTCCCTCCCTGGGACAATGTCATCTTCATGGT...AGTGAGCCTCCCTAAACATGTTCCATCTCTGTGAGGGGTTGGAAACCTCAACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000204548.2 ENSMUST00000204913.3 ENSMUST00000204980.3 |
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| 3UTR TCA 72 bp | CCAACAGTCCCTCCCACCAAGAAACAGCAAACGCTTTaGTTGCACTACCCTTTATTTCCTAGGATGGAAGTA | + |
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Preference number: 3 (lower is better) Translates to: PTVPPTKKQQTL*LHYPLFPRMEV Trigger: TACTTCCATCCTAGGAAATAAAGGGTAGTGCAATCAAAGCGTTTGCTGTTTCTTGGTGGGAGGGACTGTTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191506.8 |
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| 3UTR GCA 72 bp | CAGTCCCTCCCACCAAGAAACAGCAAACGCTTTGATTaGACTACCCTTTATTTCCTAGGATGGAAGTATCTT | + |
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Preference number: 3 (lower is better) Translates to: QSLPPRNSKRFD*TTLYFLGWKYL Trigger: AAGATACTTCCATCCTAGGAAATAAAGGGTAGTGCAATCAAAGCGTTTGCTGTTTCTTGGTGGGAGGGACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191506.8 |
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| 3UTR TCA 72 bp | AGTAATTTATTATGGCAGATGCTCAGTAAATGGGAATaGAAAAATGGTTTAGGAATAAGGAGAAGGCCAAGG | + |
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Preference number: 3 (lower is better) Translates to: SNLLWQMLSKWE*KNGLGIRRRPR Trigger: CCTTGGCCTTCTCCTTATTCCTAAACCATTTTTTCATTCCCATTTACTGAGCATCTGCCATAATAAATTACT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000191506.8 |
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| CDS-3UTR TCA 90 bp | GAAGATGACATTGTCCCAGGGAGGGAGGGCAGGATGATCTGGTCTAACCACCTCGATGCCCAGCCTCCCTaGCCACCAGAGCACGGTCAT | + |
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Preference number: 4 (lower is better) Translates to: EDDIVPGREGRMIWSNHLDAQPP*PPEHGH Trigger: ATGACCGTGCTCTGGTGGTCAGGGAGGCTGGGCATC...GAGGTGGTTAGACCAGATCATCCTGCCCTCCCTCCCTGGGACAATGTCATCTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204548.2 |
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| CDS-3UTR TCA 90 bp | GGGTGGCCAAGGTCCCTTTCAAGGGGATACACCATGAAGATGACATTGTCCCAGTCCAGGAAGAGTCGGTaGTCACACAGAAGGCCGTGC | + |
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Preference number: 4 (lower is better) Translates to: GWPRSLSRGYTMKMTLSQSRKSR*SHRRPC Trigger: GCACGGCCTTCTGTGTGATCACCGACTCTTCCTGGA...CTGGGACAATGTCATCTTCATGGTGTATCCCCTTGAAAGGGACCTTGGCCACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204980.3 |
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| CDS-3UTR CCA 90 bp | ACCCCTCACAGAGATGGAACATGTTTAGGGAGGCTCACTGGCCAGGGTGGCCAAATCCAAGGCCTGATATaGGATATCCAGGAAGAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: TPHRDGTCLGRLTGQGGQIQGLI*DIQEES Trigger: CGACTCTTCCTGGATATCCCATATCAGGCCTTGGAT...TTGGCCACCCTGGCCAGTGAGCCTCCCTAAACATGTTCCATCTCTGTGAGGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204980.3 |
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| CDS-3UTR TCA 90 bp | CTTTATTTCCTAGGATGGAAGTATCTTAAATCACATCCTGGGCCTCAGAGTCCCGGAGGGAGGGCAGGATaGTCTGGTCTAACCACCTCG | + |
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Preference number: 4 (lower is better) Translates to: LYFLGWKYLKSHPGPQSPGGRAG*SGLTTS Trigger: CGAGGTGGTTAGACCAGATCATCCTGCCCTCCCTCC...GGGACTCTGAGGCCCAGGATGTGATTTAAGATACTTCCATCCTAGGAAATAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000191506.8 ENSMUST00000199678.4 ENSMUST00000203883.3 |
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| CDS-3UTR TCA 90 bp | TGCACTACCCTTTATTTCCTAGGATGGAAGTATCTTAAATCACATCCTGGGCCTGATGCCCAGCCTCCCTaGCCACCAGAGCACGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: CTTLYFLGWKYLKSHPGPDAQPP*PPEHGH Trigger: ATGACCGTGCTCTGGTGGTCAGGGAGGCTGGGCATC...AGGCCCAGGATGTGATTTAAGATACTTCCATCCTAGGAAATAAAGGGTAGTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000203883.3 ENSMUST00000204548.2 |
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| CDS-3UTR CCA 90 bp | CCTCACAGAGATGGAACATGTTTAGGGAGGCTCACTGGCCAGGGTGGCCAAGGTTCCTTCCGATCGATTTaGAAGTTCACAAACACAGAG | + |
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Preference number: 4 (lower is better) Translates to: PHRDGTCLGRLTGQGGQGSFRSI*KFTNTE Trigger: CTCTGTGTTTGTGAACTTCCAAATCGATCGGAAGGA...ACCTTGGCCACCCTGGCCAGTGAGCCTCCCTAAACATGTTCCATCTCTGTGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000204548.2 ENSMUST00000204913.3 |
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| CDS-3UTR TCA 90 bp | GAAGATGACATTGTCCCAGGGAGGGAGGGCAGGATGATCTGGTCTAACCACCTCGTAATAGGCGAATGGTaGCCAGAATGGATAGAGATA | + |
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Preference number: 4 (lower is better) Translates to: EDDIVPGREGRMIWSNHLVIGEW*PEWIEI Trigger: TATCTCTATCCATTCTGGTCACCATTCGCCTATTAC...GAGGTGGTTAGACCAGATCATCCTGCCCTCCCTCCCTGGGACAATGTCATCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204913.3 |
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| CDS-3UTR TCA 90 bp | CCACCAAGAAACAGCAAACGCTTTGATTGCACTACCCTTTATTTCCTAGGATGGTCCAGGAAGAGTCGGTaGTCACACAGAAGGCCGTGC | + |
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Preference number: 4 (lower is better) Translates to: PPRNSKRFDCTTLYFLGWSRKSR*SHRRPC Trigger: GCACGGCCTTCTGTGTGATCACCGACTCTTCCTGGA...CCATCCTAGGAAATAAAGGGTAGTGCAATCAAAGCGTTTGCTGTTTCTTGGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191506.8 |
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| CDS-3UTR TCA 90 bp | ACTACCCTTTATTTCCTAGGATGGAAGTATCTTAAATCACATCCTGGGCCTCAGGGAGGGAGGGCAGGATaGTCTGGTCTAACCACCTCG | + |
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Preference number: 4 (lower is better) Translates to: TTLYFLGWKYLKSHPGPQGGRAG*SGLTTS Trigger: CGAGGTGGTTAGACCAGATCATCCTGCCCTCCCTCC...CTGAGGCCCAGGATGTGATTTAAGATACTTCCATCCTAGGAAATAAAGGGTAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000191506.8 ENSMUST00000199678.4 ENSMUST00000203883.3 |
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| CDS-3UTR TCA 90 bp | GATTGCACTACCCTTTATTTCCTAGGATGGAAGTATCTTAAATCACATCCTGGGGGAGGGAGGGCAGGATaGTCTGGTCTAACCACCTCG | + |
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Preference number: 4 (lower is better) Translates to: DCTTLYFLGWKYLKSHPGGGRAG*SGLTTS Trigger: CGAGGTGGTTAGACCAGATCATCCTGCCCTCCCTCC...CCCAGGATGTGATTTAAGATACTTCCATCCTAGGAAATAAAGGGTAGTGCAATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000191506.8 ENSMUST00000199678.4 ENSMUST00000203883.3 |
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| CDS-3UTR TCA 90 bp | ACTACCCTTTATTTCCTAGGATGGAAGTATCTTAAATCACATCCTGGGCCTCAGCCTGTTCCTTGTAAGTaGTGCCCAGCCTCCCTGACC | + |
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Preference number: 4 (lower is better) Translates to: TTLYFLGWKYLKSHPGPQPVPCK*CPASLT Trigger: GGTCAGGGAGGCTGGGCATCACTTACAAGGAACAGG...CTGAGGCCCAGGATGTGATTTAAGATACTTCCATCCTAGGAAATAAAGGGTAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000203883.3 ENSMUST00000204548.2 |
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| CDS-3UTR TCA 90 bp | GATTGCACTACCCTTTATTTCCTAGGATGGAAGTATCTTAAATCACATCCTGGGTCCAGGAAGAGTCGGTaGTCACACAGAAGGCCGTGC | + |
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Preference number: 4 (lower is better) Translates to: DCTTLYFLGWKYLKSHPGSRKSR*SHRRPC Trigger: GCACGGCCTTCTGTGTGATCACCGACTCTTCCTGGA...CCCAGGATGTGATTTAAGATACTTCCATCCTAGGAAATAAAGGGTAGTGCAATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000191506.8 ENSMUST00000199678.4 ENSMUST00000203883.3 ENSMUST00000204980.3 |
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| CDS-3UTR TCA 90 bp | GATTGCACTACCCTTTATTTCCTAGGATGGAAGTATCTTAAATCACATCCTGGGCCTGTTCCTTGTAAGTaGTGCCCAGCCTCCCTGACC | + |
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Preference number: 4 (lower is better) Translates to: DCTTLYFLGWKYLKSHPGPVPCK*CPASLT Trigger: GGTCAGGGAGGCTGGGCATCACTTACAAGGAACAGG...CCCAGGATGTGATTTAAGATACTTCCATCCTAGGAAATAAAGGGTAGTGCAATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000203883.3 ENSMUST00000204548.2 |
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| CDS-3UTR CCA 90 bp | TTCCTAGGATGGAAGTATCTTAAATCACATCCTGGGCCTCAGAGTCCCGTGTGTTCTTTAAGCTGGCTGTaGTCTTTTTCCTGTGCAGTG | + |
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Preference number: 4 (lower is better) Translates to: FLGWKYLKSHPGPQSPVCSLSWL*SFSCAV Trigger: CACTGCACAGGAAAAAGACCACAGCCAGCTTAAAGA...ACACACGGGACTCTGAGGCCCAGGATGTGATTTAAGATACTTCCATCCTAGGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000191506.8 ENSMUST00000199678.4 ENSMUST00000203883.3 ENSMUST00000204548.2 ENSMUST00000204913.3 |
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| CDS-3UTR GCA 90 bp | CTTTATTTCCTAGGATGGAAGTATCTTAAATCACATCCTGGGCCTCAGAGTCCCTCAAGCTTTCTCGGTTaGCTTGATCCAAGGCCTGAT | + |
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Preference number: 4 (lower is better) Translates to: LYFLGWKYLKSHPGPQSPSSFLG*LDPRPD Trigger: ATCAGGCCTTGGATCAAGGCAACCGAGAAAGCTTGA...GGGACTCTGAGGCCCAGGATGTGATTTAAGATACTTCCATCCTAGGAAATAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000191506.8 ENSMUST00000199678.4 ENSMUST00000203883.3 |
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| CDS-3UTR GCA 90 bp | CTGTGTAAGAGTTATATTCCTCCAACAGTCCCTCCCACCAAGAAACAGCAAACGCACATACTCCAGTGTTaGTGTCAAGCTTTCTCGGTT | + |
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Preference number: 4 (lower is better) Translates to: LCKSYIPPTVPPTKKQQTHILQC*CQAFSV Trigger: AACCGAGAAAGCTTGACAGCAACACTGGAGTATGTG...CGTTTGCTGTTTCTTGGTGGGAGGGACTGTTGGAGGAATATAACTCTTACACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191506.8 |
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| CDS-3UTR TCA 90 bp | TACAGTGAATTTATCTGTGTAAGAGTTATATTCCTCCAACAGTCCCTCCCACCATCTTCTCCCGGAGGGTaGTCCGGTATTTGTAACAGT | + |
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Preference number: 4 (lower is better) Translates to: YSEFICVRVIFLQQSLPPSSPGG*SGICNS Trigger: ACTGTTACAAATACCGGATCACCCTCCGGGAGAAGA...TGGTGGGAGGGACTGTTGGAGGAATATAACTCTTACACAGATAAATTCACTGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191506.8 |
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| CDS-3UTR GCA 90 bp | TGCACTACCCTTTATTTCCTAGGATGGAAGTATCTTAAATCACATCCTGGGCCTTCAAGCTTTCTCGGTTaGCTTGATCCAAGGCCTGAT | + |
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Preference number: 4 (lower is better) Translates to: CTTLYFLGWKYLKSHPGPSSFLG*LDPRPD Trigger: ATCAGGCCTTGGATCAAGGCAACCGAGAAAGCTTGA...AGGCCCAGGATGTGATTTAAGATACTTCCATCCTAGGAAATAAAGGGTAGTGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000191506.8 ENSMUST00000199678.4 ENSMUST00000203883.3 |
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| CDS-3UTR CCA 90 bp | CTTTATTTCCTAGGATGGAAGTATCTTAAATCACATCCTGGGCCTCAGAGTCCCTCTTTAAGCTGGCTGTaGTCTTTTTCCTGTGCAGTG | + |
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Preference number: 4 (lower is better) Translates to: LYFLGWKYLKSHPGPQSPSLSWL*SFSCAV Trigger: CACTGCACAGGAAAAAGACCACAGCCAGCTTAAAGA...GGGACTCTGAGGCCCAGGATGTGATTTAAGATACTTCCATCCTAGGAAATAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000191506.8 ENSMUST00000199678.4 ENSMUST00000203883.3 ENSMUST00000204548.2 ENSMUST00000204913.3 |
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| CDS-3UTR CCA 90 bp | ACTACCCTTTATTTCCTAGGATGGAAGTATCTTAAATCACATCCTGGGCCTCAGATCCAAGGCCTGATATaGGATATCCAGGAAGAGTCG | + |
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Preference number: 4 (lower is better) Translates to: TTLYFLGWKYLKSHPGPQIQGLI*DIQEES Trigger: CGACTCTTCCTGGATATCCCATATCAGGCCTTGGAT...CTGAGGCCCAGGATGTGATTTAAGATACTTCCATCCTAGGAAATAAAGGGTAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000191506.8 ENSMUST00000199678.4 ENSMUST00000203883.3 ENSMUST00000204980.3 |
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| CDS-3UTR GCA 90 bp | ACCCTTTATTTCCTAGGATGGAAGTATCTTAAATCACATCCTGGGCCTCAGAGTCACATACTCCAGTGTTaGTGTCAAGCTTTCTCGGTT | + |
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Preference number: 4 (lower is better) Translates to: TLYFLGWKYLKSHPGPQSHILQC*CQAFSV Trigger: AACCGAGAAAGCTTGACAGCAACACTGGAGTATGTG...ACTCTGAGGCCCAGGATGTGATTTAAGATACTTCCATCCTAGGAAATAAAGGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000191506.8 ENSMUST00000199678.4 ENSMUST00000203883.3 |
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| CDS-3UTR CCA 90 bp | TGCACTACCCTTTATTTCCTAGGATGGAAGTATCTTAAATCACATCCTGGGCCTTCTTTAAGCTGGCTGTaGTCTTTTTCCTGTGCAGTG | + |
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Preference number: 4 (lower is better) Translates to: CTTLYFLGWKYLKSHPGPSLSWL*SFSCAV Trigger: CACTGCACAGGAAAAAGACCACAGCCAGCTTAAAGA...AGGCCCAGGATGTGATTTAAGATACTTCCATCCTAGGAAATAAAGGGTAGTGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000191506.8 ENSMUST00000199678.4 ENSMUST00000203883.3 ENSMUST00000204548.2 ENSMUST00000204913.3 |
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| CDS-3UTR CCA 90 bp | TACAGTGAATTTATCTGTGTAAGAGTTATATTCCTCCAACAGTCCCTCCCACCAATCCAAGGCCTGATATaGGATATCCAGGAAGAGTCG | + |
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Preference number: 4 (lower is better) Translates to: YSEFICVRVIFLQQSLPPIQGLI*DIQEES Trigger: CGACTCTTCCTGGATATCCCATATCAGGCCTTGGAT...TGGTGGGAGGGACTGTTGGAGGAATATAACTCTTACACAGATAAATTCACTGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191506.8 |
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| CDS-3UTR CCA 90 bp | GATTGCACTACCCTTTATTTCCTAGGATGGAAGTATCTTAAATCACATCCTGGGATCCAAGGCCTGATATaGGATATCCAGGAAGAGTCG | + |
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Preference number: 4 (lower is better) Translates to: DCTTLYFLGWKYLKSHPGIQGLI*DIQEES Trigger: CGACTCTTCCTGGATATCCCATATCAGGCCTTGGAT...CCCAGGATGTGATTTAAGATACTTCCATCCTAGGAAATAAAGGGTAGTGCAATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000191506.8 ENSMUST00000199678.4 ENSMUST00000203883.3 ENSMUST00000204980.3 |
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| CDS-3UTR CCA 90 bp | CTTTATTTCCTAGGATGGAAGTATCTTAAATCACATCCTGGGCCTCAGAGTCCCTCCTTCCGATCGATTTaGAAGTTCACAAACACAGAG | + |
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Preference number: 4 (lower is better) Translates to: LYFLGWKYLKSHPGPQSPSFRSI*KFTNTE Trigger: CTCTGTGTTTGTGAACTTCCAAATCGATCGGAAGGA...GGGACTCTGAGGCCCAGGATGTGATTTAAGATACTTCCATCCTAGGAAATAAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000191506.8 ENSMUST00000199678.4 ENSMUST00000203883.3 ENSMUST00000204548.2 ENSMUST00000204913.3 |
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| CDS-3UTR GCA 90 bp | TCATACAGTGAATTTATCTGTGTAAGAGTTATATTCCTCCAACAGTCCCTCCCATCAAGCTTTCTCGGTTaGCTTGATCCAAGGCCTGAT | + |
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Preference number: 4 (lower is better) Translates to: SYSEFICVRVIFLQQSLPSSFLG*LDPRPD Trigger: ATCAGGCCTTGGATCAAGGCAACCGAGAAAGCTTGA...TGGGAGGGACTGTTGGAGGAATATAACTCTTACACAGATAAATTCACTGTATGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191506.8 |
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| CDS-3UTR CCA 90 bp | TACAGTGAATTTATCTGTGTAAGAGTTATATTCCTCCAACAGTCCCTCCCACCATCTTTAAGCTGGCTGTaGTCTTTTTCCTGTGCAGTG | + |
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Preference number: 4 (lower is better) Translates to: YSEFICVRVIFLQQSLPPSLSWL*SFSCAV Trigger: CACTGCACAGGAAAAAGACCACAGCCAGCTTAAAGA...TGGTGGGAGGGACTGTTGGAGGAATATAACTCTTACACAGATAAATTCACTGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000191506.8 |
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| CDS-3UTR CCA 90 bp | GATTGCACTACCCTTTATTTCCTAGGATGGAAGTATCTTAAATCACATCCTGGGTCTTTAAGCTGGCTGTaGTCTTTTTCCTGTGCAGTG | + |
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Preference number: 4 (lower is better) Translates to: DCTTLYFLGWKYLKSHPGSLSWL*SFSCAV Trigger: CACTGCACAGGAAAAAGACCACAGCCAGCTTAAAGA...CCCAGGATGTGATTTAAGATACTTCCATCCTAGGAAATAAAGGGTAGTGCAATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000191506.8 ENSMUST00000199678.4 ENSMUST00000203883.3 ENSMUST00000204548.2 ENSMUST00000204913.3 |
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| CDS-3UTR CCA 90 bp | ACTACCCTTTATTTCCTAGGATGGAAGTATCTTAAATCACATCCTGGGCCTCAGTCCTTCCGATCGATTTaGAAGTTCACAAACACAGAG | + |
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Preference number: 4 (lower is better) Translates to: TTLYFLGWKYLKSHPGPQSFRSI*KFTNTE Trigger: CTCTGTGTTTGTGAACTTCCAAATCGATCGGAAGGA...CTGAGGCCCAGGATGTGATTTAAGATACTTCCATCCTAGGAAATAAAGGGTAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000191506.8 ENSMUST00000199678.4 ENSMUST00000203883.3 ENSMUST00000204548.2 ENSMUST00000204913.3 |
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| CDS-3UTR TCA 90 bp | GATTGCACTACCCTTTATTTCCTAGGATGGAAGTATCTTAAATCACATCCTGGGGTAATAGGCGAATGGTaGCCAGAATGGATAGAGATA | + |
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Preference number: 4 (lower is better) Translates to: DCTTLYFLGWKYLKSHPGVIGEW*PEWIEI Trigger: TATCTCTATCCATTCTGGTCACCATTCGCCTATTAC...CCCAGGATGTGATTTAAGATACTTCCATCCTAGGAAATAAAGGGTAGTGCAATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000191506.8 ENSMUST00000199678.4 ENSMUST00000204913.3 |
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| CDS-3UTR GCA 90 bp | TGCACTACCCTTTATTTCCTAGGATGGAAGTATCTTAAATCACATCCTGGGCCTCACATACTCCAGTGTTaGTGTCAAGTGAATAGAGTT | + |
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Preference number: 4 (lower is better) Translates to: CTTLYFLGWKYLKSHPGPHILQC*CQVNRV Trigger: AACTCTATTCACTTGACAGCAACACTGGAGTATGTG...AGGCCCAGGATGTGATTTAAGATACTTCCATCCTAGGAAATAAAGGGTAGTGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000204548.2 ENSMUST00000204913.3 |
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| CDS-3UTR CCA 90 bp | GATTGCACTACCCTTTATTTCCTAGGATGGAAGTATCTTAAATCACATCCTGGGTCCTTCCGATCGATTTaGAAGTTCACAAACACAGAG | + |
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Preference number: 4 (lower is better) Translates to: DCTTLYFLGWKYLKSHPGSFRSI*KFTNTE Trigger: CTCTGTGTTTGTGAACTTCCAAATCGATCGGAAGGA...CCCAGGATGTGATTTAAGATACTTCCATCCTAGGAAATAAAGGGTAGTGCAATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000191506.8 ENSMUST00000199678.4 ENSMUST00000203883.3 ENSMUST00000204548.2 ENSMUST00000204913.3 |
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| CDS-3UTR TCA 90 bp | GATTGCACTACCCTTTATTTCCTAGGATGGAAGTATCTTAAATCACATCCTGGGGTGTTTTTCCCCTCTTaGTATAAGAAAGGGAGTAGA | + |
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Preference number: 4 (lower is better) Translates to: DCTTLYFLGWKYLKSHPGVFFPS*YKKGSR Trigger: TCTACTCCCTTTCTTATATCAAGAGGGGAAAAACAC...CCCAGGATGTGATTTAAGATACTTCCATCCTAGGAAATAAAGGGTAGTGCAATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000191506.8 ENSMUST00000199678.4 ENSMUST00000204913.3 |
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| CDS-3UTR GCA 90 bp | GATTGCACTACCCTTTATTTCCTAGGATGGAAGTATCTTAAATCACATCCTGGGCACATACTCCAGTGTTaGTGTCAAGTGAATAGAGTT | + |
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Preference number: 4 (lower is better) Translates to: DCTTLYFLGWKYLKSHPGHILQC*CQVNRV Trigger: AACTCTATTCACTTGACAGCAACACTGGAGTATGTG...CCCAGGATGTGATTTAAGATACTTCCATCCTAGGAAATAAAGGGTAGTGCAATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000204548.2 ENSMUST00000204913.3 |
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| CDS-3UTR CCA 90 bp | TCATACAGTGAATTTATCTGTGTAAGAGTTATATTCCTCCAACAGTCCCTCCCATCCTTCCGATCGATTTaGAAGTTCACAAACACAGAG | + |
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Preference number: 4 (lower is better) Translates to: SYSEFICVRVIFLQQSLPSFRSI*KFTNTE Trigger: CTCTGTGTTTGTGAACTTCCAAATCGATCGGAAGGA...TGGGAGGGACTGTTGGAGGAATATAACTCTTACACAGATAAATTCACTGTATGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191506.8 |
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| CDS-3UTR TCA 90 bp | TCATACAGTGAATTTATCTGTGTAAGAGTTATATTCCTCCAACAGTCCCTCCCAGTGTTTTTCCCCTCTTaGTATAAGAAAGGGAGTAGA | + |
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Preference number: 4 (lower is better) Translates to: SYSEFICVRVIFLQQSLPVFFPS*YKKGSR Trigger: TCTACTCCCTTTCTTATATCAAGAGGGGAAAAACAC...TGGGAGGGACTGTTGGAGGAATATAACTCTTACACAGATAAATTCACTGTATGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000191506.8 |
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| CDS CCA 90 bp | TTAAGCTGGCTGTGGTCTTTTTCCTGTGCAGTGCTCCTACCCACCTaGAGGCCTCCTAGGGACTCGCACTGGAGGCAGGAGCACGGGAGG | + |
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Preference number: 5 (lower is better) Translates to: LSWLWSFSCAVLLPT*RPPRDSHWRQEHGR Trigger: CCTCCCGTGCTCCTGCCTCCAGTGCGAGTCCCTAGGAGGCCTCCAGGTGGGTAGGAGCACTGCACAGGAAAAAGACCACAGCCAGCTTAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000191506.8 |
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| CDS CCA 90 bp | TTAAGCTGGCTGTGGTCTTTTTCCTGTGCAGTGCTCCTACCCACCTaGAGGCCTCCTAGGGACTCGGAGCACTGGAGGCAGGAGCACGGG | + |
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Preference number: 5 (lower is better) Translates to: LSWLWSFSCAVLLPT*RPPRDSEHWRQEHG Trigger: CCCGTGCTCCTGCCTCCAGTGCTCCGAGTCCCTAGGAGGCCTCCAGGTGGGTAGGAGCACTGCACAGGAAAAAGACCACAGCCAGCTTAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000199678.4 ENSMUST00000203883.3 ENSMUST00000204548.2 ENSMUST00000204913.3 |
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| CDS CCA 90 bp | CGCAGCAGGGCACCTTTCTCGGTTGCCTTGATCCAAGGCCTGATATaGGATATCCAGGAAGAGTCGGTGATCACACAGAAGGCCGTGCCA | + |
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Preference number: 5 (lower is better) Translates to: RSRAPFSVALIQGLI*DIQEESVITQKAVP Trigger: TGGCACGGCCTTCTGTGTGATCACCGACTCTTCCTGGATATCCCATATCAGGCCTTGGATCAAGGCAACCGAGAAAGGTGCCCTGCTGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204980.3 |
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| CDS CCA 90 bp | CACCATGAAGATGACATTGTCCCAGGGAGGGAGGGCAGGATGATCTaGTCTAACCACCTCGAAGCCCATGTAGCTAAAGGCTCGCAGCAG | + |
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Preference number: 5 (lower is better) Translates to: HHEDDIVPGREGRMI*SNHLEAHVAKGSQQ Trigger: CTGCTGCGAGCCTTTAGCTACATGGGCTTCGAGGTGGTTAGACCAGATCATCCTGCCCTCCCTCCCTGGGACAATGTCATCTTCATGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000191506.8 ENSMUST00000199678.4 ENSMUST00000203883.3 |
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| CDS CCA 90 bp | TGTTGCTGTCAAGCTTTCTCGGTTGCCTTGATCCAAGGCCTGATATaGGATATCCAGGAAGAGTCGGTGATCACACAGAAGGCCGTGCCA | + |
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Preference number: 5 (lower is better) Translates to: CCCQAFSVALIQGLI*DIQEESVITQKAVP Trigger: TGGCACGGCCTTCTGTGTGATCACCGACTCTTCCTGGATATCCCATATCAGGCCTTGGATCAAGGCAACCGAGAAAGCTTGACAGCAACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000191506.8 ENSMUST00000199678.4 ENSMUST00000203883.3 |
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| CDS-3UTR CAA 90 bp | AATAAGGAGAAGGCCAAGGGAGCCCTCCCACATCTGACTCATGTTCCTCTGGTTGCTTTCTCGGTTGCCTaGATCCAAGGCCTGATATGG | + |
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Preference number: 5 (lower is better) Translates to: NKEKAKGALPHLTHVPLVAFSVA*IQGLIW Trigger: CCATATCAGGCCTTGGATCAAGGCAACCGAGAAAGC...AACCAGAGGAACATGAGTCAGATGTGGGAGGGCTCCCTTGGCCTTCTCCTTATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191506.8 |
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| CDS-3UTR CAA 90 bp | AGGGTGGCCAAGGTCCCTTTCAAGGGGATACACCATGAAGATGACATTGTCCCACCTTTCTCGGTTGCCTaGATCCAAGGCCTGATATGG | + |
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Preference number: 5 (lower is better) Translates to: RVAKVPFKGIHHEDDIVPPFSVA*IQGLIW Trigger: CCATATCAGGCCTTGGATCAAGGCAACCGAGAAAGG...TGGGACAATGTCATCTTCATGGTGTATCCCCTTGAAAGGGACCTTGGCCACCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204980.3 |
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| CDS-3UTR CAA 90 bp | TTCCTAGGATGGAAGTATCTTAAATCACATCCTGGGCCTCAGAGTCCCGTGTGTGAAGCAGGGGGTCAGTaGATAGCACTGTCAGGTTCC | + |
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Preference number: 5 (lower is better) Translates to: FLGWKYLKSHPGPQSPVCEAGGQ*IALSGS Trigger: GGAACCTGACAGTGCTATCAACTGACCCCCTGCTTC...ACACACGGGACTCTGAGGCCCAGGATGTGATTTAAGATACTTCCATCCTAGGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000191506.8 ENSMUST00000199678.4 ENSMUST00000203883.3 |
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| CDS-3UTR CAA 90 bp | TTCCTAGGATGGAAGTATCTTAAATCACATCCTGGGCCTCAGAGTCCCGTGTGTACCATGAAGATGACATaGTCCCAGGGAGGGAGGGCA | + |
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Preference number: 5 (lower is better) Translates to: FLGWKYLKSHPGPQSPVCTMKMT*SQGGRA Trigger: TGCCCTCCCTCCCTGGGACAATGTCATCTTCATGGT...ACACACGGGACTCTGAGGCCCAGGATGTGATTTAAGATACTTCCATCCTAGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000191506.8 ENSMUST00000199678.4 ENSMUST00000203883.3 |
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| CDS-3UTR CAA 90 bp | TTCCTAGGATGGAAGTATCTTAAATCACATCCTGGGCCTCAGAGTCCCGTGTGTGCTTTCTCGGTTGCCTaGATCCAAGGCCTGATATGG | + |
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Preference number: 5 (lower is better) Translates to: FLGWKYLKSHPGPQSPVCAFSVA*IQGLIW Trigger: CCATATCAGGCCTTGGATCAAGGCAACCGAGAAAGC...ACACACGGGACTCTGAGGCCCAGGATGTGATTTAAGATACTTCCATCCTAGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000191506.8 ENSMUST00000199678.4 ENSMUST00000203883.3 |
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| CDS-3UTR CAA 90 bp | GCCAGGGTGGCCAAGGTCCCTTTCAAGGGGATACACCATGAAGATGACATTGTCGTCCTTCCGATCGATTaGGAAGTTCACAAACACAGA | + |
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Preference number: 5 (lower is better) Translates to: ARVAKVPFKGIHHEDDIVVLPID*EVHKHR Trigger: TCTGTGTTTGTGAACTTCCAAATCGATCGGAAGGAC...GACAATGTCATCTTCATGGTGTATCCCCTTGAAAGGGACCTTGGCCACCCTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000204548.2 ENSMUST00000204913.3 |
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| CDS GCA 90 bp | TTTTCTCCTCCACATACTCCAGTGTTGCTGTCAAGCTTTCTCGGTTaGCTTGATCCAAGGCCTGATATGGGATATCCAGGAAGAGTCGGT | + |
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Preference number: 5 (lower is better) Translates to: FSPPHTPVLLSSFLG*LDPRPDMGYPGRVG Trigger: ACCGACTCTTCCTGGATATCCCATATCAGGCCTTGGATCAAGGCAACCGAGAAAGCTTGACAGCAACACTGGAGTATGTGGAGGAGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000191506.8 ENSMUST00000199678.4 ENSMUST00000203883.3 |
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| CDS-3UTR CAA 90 bp | CTTTATTTCCTAGGATGGAAGTATCTTAAATCACATCCTGGGCCTCAGAGTCCCGAAGCAGGGGGTCAGTaGATAGCACTGTCAGGTTCC | + |
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Preference number: 5 (lower is better) Translates to: LYFLGWKYLKSHPGPQSPEAGGQ*IALSGS Trigger: GGAACCTGACAGTGCTATCAACTGACCCCCTGCTTC...GGGACTCTGAGGCCCAGGATGTGATTTAAGATACTTCCATCCTAGGAAATAAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000191506.8 ENSMUST00000199678.4 ENSMUST00000203883.3 |
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| CDS-3UTR CAA 90 bp | ACTACCCTTTATTTCCTAGGATGGAAGTATCTTAAATCACATCCTGGGCCTCAGGAAGCAGGGGGTCAGTaGATAGCACTGTCAGGTTCC | + |
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Preference number: 5 (lower is better) Translates to: TTLYFLGWKYLKSHPGPQEAGGQ*IALSGS Trigger: GGAACCTGACAGTGCTATCAACTGACCCCCTGCTTC...CTGAGGCCCAGGATGTGATTTAAGATACTTCCATCCTAGGAAATAAAGGGTAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000191506.8 ENSMUST00000199678.4 ENSMUST00000203883.3 |
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| CDS-3UTR CAA 90 bp | ACCCTTTATTTCCTAGGATGGAAGTATCTTAAATCACATCCTGGGCCTCAGAGTACCATGAAGATGACATaGTCCCAGGGAGGGAGGGCA | + |
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Preference number: 5 (lower is better) Translates to: TLYFLGWKYLKSHPGPQSTMKMT*SQGGRA Trigger: TGCCCTCCCTCCCTGGGACAATGTCATCTTCATGGT...ACTCTGAGGCCCAGGATGTGATTTAAGATACTTCCATCCTAGGAAATAAAGGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000191506.8 ENSMUST00000199678.4 ENSMUST00000203883.3 |
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| CDS CCA 90 bp | TGTCCTTCCGATCGATTTGGAAGTTCACAAACACAGAGTCCACATTaGTTTTCTCCTCCACATACTCCAGTGTTGCTGTCAAGCTTTCTC | + |
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Preference number: 5 (lower is better) Translates to: CPSDRFGSSQTQSPH*FSPPHTPVLLSSFL Trigger: GAGAAAGCTTGACAGCAACACTGGAGTATGTGGAGGAGAAAACCAATGTGGACTCTGTGTTTGTGAACTTCCAAATCGATCGGAAGGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000191506.8 ENSMUST00000199678.4 ENSMUST00000203883.3 |
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| CDS-3UTR CAA 90 bp | ACTACCCTTTATTTCCTAGGATGGAAGTATCTTAAATCACATCCTGGGCCTCAGGTCCTTCCGATCGATTaGGAAGTTCACAAACACAGA | + |
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Preference number: 5 (lower is better) Translates to: TTLYFLGWKYLKSHPGPQVLPID*EVHKHR Trigger: TCTGTGTTTGTGAACTTCCAAATCGATCGGAAGGAC...CTGAGGCCCAGGATGTGATTTAAGATACTTCCATCCTAGGAAATAAAGGGTAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000191506.8 ENSMUST00000199678.4 ENSMUST00000203883.3 ENSMUST00000204548.2 ENSMUST00000204913.3 |
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| CDS-3UTR CAA 90 bp | TGCACTACCCTTTATTTCCTAGGATGGAAGTATCTTAAATCACATCCTGGGCCTGTCCTTCCGATCGATTaGGAAGTTCACAAACACAGA | + |
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Preference number: 5 (lower is better) Translates to: CTTLYFLGWKYLKSHPGPVLPID*EVHKHR Trigger: TCTGTGTTTGTGAACTTCCAAATCGATCGGAAGGAC...AGGCCCAGGATGTGATTTAAGATACTTCCATCCTAGGAAATAAAGGGTAGTGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000191506.8 ENSMUST00000199678.4 ENSMUST00000203883.3 ENSMUST00000204548.2 ENSMUST00000204913.3 |
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| CDS TCA 72 bp | GGGGCCGGAGAGTCAGGTCCTCCTGTTCCTTGTAAGTaGTGCCCAGCCTCCCTGACCACCAGAGCACGGTCA | + |
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Preference number: 6 (lower is better) Translates to: GAGESGPPVPCK*CPASLTTRARS Trigger: TGACCGTGCTCTGGTGGTCAGGGAGGCTGGGCATCACTTACAAGGAACAGGAGGACCTGACTCTCCGGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000203883.3 ENSMUST00000204548.2 |
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| CDS CCA 72 bp | CTGTGGTCTTTTTCCTGTGCAGTGCTCCTACCCACCTaGAGGCCTCCTAGGGACTCGCACTGGAGGCAGGAG | + |
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Preference number: 6 (lower is better) Translates to: LWSFSCAVLLPT*RPPRDSHWRQE Trigger: CTCCTGCCTCCAGTGCGAGTCCCTAGGAGGCCTCCAGGTGGGTAGGAGCACTGCACAGGAAAAAGACCACAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000191506.8 |
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| CDS CCA 72 bp | CTGTGGTCTTTTTCCTGTGCAGTGCTCCTACCCACCTaGAGGCCTCCTAGGGACTCGGAGCACTGGAGGCAG | + |
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Preference number: 6 (lower is better) Translates to: LWSFSCAVLLPT*RPPRDSEHWRQ Trigger: CTGCCTCCAGTGCTCCGAGTCCCTAGGAGGCCTCCAGGTGGGTAGGAGCACTGCACAGGAAAAAGACCACAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000199678.4 ENSMUST00000203883.3 ENSMUST00000204548.2 ENSMUST00000204913.3 |
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| CDS CCA 72 bp | GATGACATTGTCCCAGGGAGGGAGGGCAGGATGATCTaGTCTAACCACCTCGAAGCCCATGTAGCTAAAGGC | + |
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Preference number: 6 (lower is better) Translates to: DDIVPGREGRMI*SNHLEAHVAKG Trigger: GCCTTTAGCTACATGGGCTTCGAGGTGGTTAGACCAGATCATCCTGCCCTCCCTCCCTGGGACAATGTCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000191506.8 ENSMUST00000199678.4 ENSMUST00000203883.3 |
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| CDS CAA 72 bp | CTAAAGGCTCGCAGCAGGGCACCTTTCTCGGTTGCCTaGATCCAAGGCCTGATATGGGATATCCAGGAAGAG | + |
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Preference number: 6 (lower is better) Translates to: LKARSRAPFSVA*IQGLIWDIQEE Trigger: CTCTTCCTGGATATCCCATATCAGGCCTTGGATCAAGGCAACCGAGAAAGGTGCCCTGCTGCGAGCCTTTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204980.3 |
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| CDS TCA 72 bp | GGGGCCGGAGAGTCAGGTCCTCCTGTTCCTTGTAAGTaGTGCTTTTGTAACAACAAGGCAGCATCTTCTCCC | + |
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Preference number: 6 (lower is better) Translates to: GAGESGPPVPCK*CFCNNKAASSP Trigger: GGGAGAAGATGCTGCCTTGTTGTTACAAAAGCATCACTTACAAGGAACAGGAGGACCTGACTCTCCGGCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000191506.8 ENSMUST00000199678.4 ENSMUST00000204913.3 |
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| CDS CAA 90 bp | CTCCTCCACATACTCCAGTGTTGCTGTCAAGCTTTCTCGGTTGCCTaGATCCAAGGCCTGATATGGGATATCCAGGAAGAGTCGGTGATC | + |
|
Preference number: 6 (lower is better) Translates to: LLHILQCCCQAFSVA*IQGLIWDIQEESVI Trigger: GATCACCGACTCTTCCTGGATATCCCATATCAGGCCTTGGATCAAGGCAACCGAGAAAGCTTGACAGCAACACTGGAGTATGTGGAGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000191506.8 ENSMUST00000199678.4 ENSMUST00000203883.3 |
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| CDS GCA 72 bp | CCACATACTCCAGTGTTGCTGTCAAGCTTTCTCGGTTaGCTTGATCCAAGGCCTGATATGGGATATCCAGGA | + |
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Preference number: 6 (lower is better) Translates to: PHTPVLLSSFLG*LDPRPDMGYPG Trigger: TCCTGGATATCCCATATCAGGCCTTGGATCAAGGCAACCGAGAAAGCTTGACAGCAACACTGGAGTATGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000191506.8 ENSMUST00000199678.4 ENSMUST00000203883.3 |
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| CDS GCA 72 bp | GTCCACATTGGTTTTCTCCTCCACATACTCCAGTGTTaGTGTCAAGCTTTCTCGGTTGCCTTGATCCAAGGC | + |
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Preference number: 6 (lower is better) Translates to: VHIGFLLHILQC*CQAFSVALIQG Trigger: GCCTTGGATCAAGGCAACCGAGAAAGCTTGACAGCAACACTGGAGTATGTGGAGGAGAAAACCAATGTGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000191506.8 ENSMUST00000199678.4 ENSMUST00000203883.3 |
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| CDS CAA 72 bp | ATACTCCAGTGTTGCTGTCAAGCTTTCTCGGTTGCCTaGATCCAAGGCCTGATATGGGATATCCAGGAAGAG | + |
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Preference number: 6 (lower is better) Translates to: ILQCCCQAFSVA*IQGLIWDIQEE Trigger: CTCTTCCTGGATATCCCATATCAGGCCTTGGATCAAGGCAACCGAGAAAGCTTGACAGCAACACTGGAGTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000191506.8 ENSMUST00000199678.4 ENSMUST00000203883.3 |
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| CDS CAA 72 bp | AGTCCACATTGGTTTTCTCCTCCACATACTCCAGTGTaGCTGTCAAGCTTTCTCGGTTGCCTTGATCCAAGG | + |
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Preference number: 6 (lower is better) Translates to: SPHWFSPPHTPV*LSSFLGCLDPR Trigger: CCTTGGATCAAGGCAACCGAGAAAGCTTGACAGCAACACTGGAGTATGTGGAGGAGAAAACCAATGTGGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000191506.8 ENSMUST00000199678.4 ENSMUST00000203883.3 |
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| CDS CAA 90 bp | CTGTCCTTCCGATCGATTTGGAAGTTCACAAACACAGAGTCCACATaGGTTTTCTCCTCCACATACTCCAGTGTTGCTGTCAAGCTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: LSFRSIWKFTNTEST*VFSSTYSSVAVKLS Trigger: AGAAAGCTTGACAGCAACACTGGAGTATGTGGAGGAGAAAACCAATGTGGACTCTGTGTTTGTGAACTTCCAAATCGATCGGAAGGACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000191506.8 ENSMUST00000199678.4 ENSMUST00000203883.3 |
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| CDS TCA 72 bp | TTTTGTAACAACAAGGCAGCATCTTCTCCCGGAGGGTaGTCCGGTATTTGTAACAGTAGAGGTAATAGGCGA | + |
|
Preference number: 6 (lower is better) Translates to: FCNNKAASSPGG*SGICNSRGNRR Trigger: TCGCCTATTACCTCTACTGTTACAAATACCGGATCACCCTCCGGGAGAAGATGCTGCCTTGTTGTTACAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000191506.8 ENSMUST00000199678.4 ENSMUST00000204913.3 |
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