Pregenerated sensors for OAZ2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040652Ensembl transcript IDs: ENSMUST00000046490.14, ENSMUST00000128664.2, ENSMUST00000136166.3, ENSMUST00000153700.9
Found 110 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGCGCAGGCACTGTTCTGAACCTGTTAAGGAGGCAGGCAGTACTGTaGTTGGCCAGCCAGAGGCATCCAGGCGCTAAGAACAGGCTCCCC | + |
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Preference number: 1 (lower is better) Translates to: SAGTVLNLLRRQAVL*LASQRHPGAKNRLP Trigger: GGGGAGCCTGTTCTTAGCGCCTGGATGCCTCTGGCTGGCCAAGCACAGTACTGCCTGCCTCCTTAACAGGTTCAGAACAGTGCCTGCGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046490.14 ENSMUST00000153700.9 |
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| 3UTR TCA 90 bp | GGCATCCAGGCGCTAAGAACAGGCTCCCCCACAAACCCCAGGCCCTaGGTTTGGTATTCTTCCTCTCTGCTCTTGCAAGGAAAGAGATCC | + |
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Preference number: 1 (lower is better) Translates to: GIQALRTGSPTNPRP*VWYSSSLLLQGKRS Trigger: GGATCTCTTTCCTTGCAAGAGCAGAGAGGAAGAATACCAAACTCAGGGCCTGGGGTTTGTGGGGGAGCCTGTTCTTAGCGCCTGGATGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046490.14 ENSMUST00000153700.9 |
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| 3UTR GCA 90 bp | GTAAAAGGCAGGCCATTTCTGCAGTCCAGCCCTACCTCTCAGCTCTaGAGCGCAGGCACTGTTCTGAACCTGTTAAGGAGGCAGGCAGTA | + |
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Preference number: 1 (lower is better) Translates to: VKGRPFLQSSPTSQL*SAGTVLNLLRRQAV Trigger: TACTGCCTGCCTCCTTAACAGGTTCAGAACAGTGCCTGCGCTGCAGAGCTGAGAGGTAGGGCTGGACTGCAGAAATGGCCTGCCTTTTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046490.14 ENSMUST00000153700.9 |
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| 3UTR TCA 90 bp | ATTTCAACGAGTCAACTCCGAGAACACAATGGGCAACCCTCAACCTaGGCCCCTCAATGTCCTTCCCTAGACAGCCAGAGACCCTCTCCT | + |
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Preference number: 1 (lower is better) Translates to: ISTSQLREHNGQPST*APQCPSLDSQRPSP Trigger: AGGAGAGGGTCTCTGGCTGTCTAGGGAAGGACATTGAGGGGCTCAGGTTGAGGGTTGCCCATTGTGTTCTCGGAGTTGACTCGTTGAAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046490.14 ENSMUST00000128664.2 ENSMUST00000153700.9 |
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| 3UTR GCA 90 bp | ATGCCAGAAGCTCAAGGTGGAGTGTTGAAGACAACCCAAGGACACTaGCCAGGAGCTAAAGCCTATACTCAGGAGCCCCTAGATGACAAG | + |
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Preference number: 1 (lower is better) Translates to: MPEAQGGVLKTTQGH*PGAKAYTQEPLDDK Trigger: CTTGTCATCTAGGGGCTCCTGAGTATAGGCTTTAGCTCCTGGGCAGTGTCCTTGGGTTGTCTTCAACACTCCACCTTGAGCTTCTGGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046490.14 ENSMUST00000153700.9 |
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| 3UTR TCA 90 bp | TACACCAGGCCAGACACAAAATGCCAGAAGCTCAAGGTGGAGTGTTaGAGACAACCCAAGGACACTGCCCAGGAGCTAAAGCCTATACTC | + |
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Preference number: 1 (lower is better) Translates to: YTRPDTKCQKLKVEC*RQPKDTAQELKPIL Trigger: GAGTATAGGCTTTAGCTCCTGGGCAGTGTCCTTGGGTTGTCTTCAACACTCCACCTTGAGCTTCTGGCATTTTGTGTCTGGCCTGGTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046490.14 ENSMUST00000153700.9 |
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| 3UTR CCA 90 bp | TTCTTTATGGAAAACAATTTCAACGAGTCAACTCCGAGAACACAATaGGCAACCCTCAACCTGAGCCCCTCAATGTCCTTCCCTAGACAG | + |
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Preference number: 1 (lower is better) Translates to: FFMENNFNESTPRTQ*ATLNLSPSMSFPRQ Trigger: CTGTCTAGGGAAGGACATTGAGGGGCTCAGGTTGAGGGTTGCCCATTGTGTTCTCGGAGTTGACTCGTTGAAATTGTTTTCCATAAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046490.14 ENSMUST00000128664.2 ENSMUST00000153700.9 |
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| 3UTR-3UTR GCA 90 bp | TGGCCAGCCAGAGGCATCCAGGCGCTAAGAACAGGCTCCCCCACAAACCCCAGGCCTCTGTCCCAAGGCTaGCTAACTTCCCCTCTTCCC | + |
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Preference number: 2 (lower is better) Translates to: WPARGIQALRTGSPTNPRPLSQG*LTSPLP Trigger: GGGAAGAGGGGAAGTTAGGCAGCCTTGGGACAGAGG...CCTGGGGTTTGTGGGGGAGCCTGTTCTTAGCGCCTGGATGCCTCTGGCTGGCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000046490.14 ENSMUST00000153700.9 |
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| 3UTR CAA 90 bp | GCAGGCACTGTTCTGAACCTGTTAAGGAGGCAGGCAGTACTGTGCTaGGCCAGCCAGAGGCATCCAGGCGCTAAGAACAGGCTCCCCCAC | + |
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Preference number: 2 (lower is better) Translates to: AGTVLNLLRRQAVLC*ASQRHPGAKNRLPH Trigger: GTGGGGGAGCCTGTTCTTAGCGCCTGGATGCCTCTGGCTGGCCAAGCACAGTACTGCCTGCCTCCTTAACAGGTTCAGAACAGTGCCTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046490.14 ENSMUST00000153700.9 |
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| 3UTR-3UTR CCA 90 bp | CTCTGCAGCGCAGGCACTGTTCTGAACCTGTTAAGGAGGCAGGCAGTACTGTGCCAAGGAAAGAGATCCTaGGGCCTAGGCCACAGAGGC | + |
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Preference number: 2 (lower is better) Translates to: LCSAGTVLNLLRRQAVLCQGKRS*GLGHRG Trigger: GCCTCTGTGGCCTAGGCCCCAGGATCTCTTTCCTTG...GCACAGTACTGCCTGCCTCCTTAACAGGTTCAGAACAGTGCCTGCGCTGCAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046490.14 ENSMUST00000153700.9 |
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| 3UTR-3UTR TCA 90 bp | CGAGTCAACTCCGAGAACACAATGGGCAACCCTCAACCTGAGCCCCTCAATGTCGAGGGGACACAGGGATaGCCTGGACGCACAATCTCA | + |
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Preference number: 2 (lower is better) Translates to: RVNSENTMGNPQPEPLNVEGTQG*PGRTIS Trigger: TGAGATTGTGCGTCCAGGTCATCCCTGTGTCCCCTC...GACATTGAGGGGCTCAGGTTGAGGGTTGCCCATTGTGTTCTCGGAGTTGACTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128664.2 |
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| 3UTR-3UTR GCA 90 bp | CGAGTCAACTCCGAGAACACAATGGGCAACCCTCAACCTGAGCCCCTCAATGTCCCTCTGTCCCAAGGCTaGCTAACTTCCCCTCTTCCC | + |
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Preference number: 2 (lower is better) Translates to: RVNSENTMGNPQPEPLNVPLSQG*LTSPLP Trigger: GGGAAGAGGGGAAGTTAGGCAGCCTTGGGACAGAGG...GACATTGAGGGGCTCAGGTTGAGGGTTGCCCATTGTGTTCTCGGAGTTGACTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046490.14 ENSMUST00000128664.2 ENSMUST00000153700.9 |
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| 3UTR-3UTR TCA 90 bp | TCCAGCCCTACCTCTCAGCTCTGCAGCGCAGGCACTGTTCTGAACCTGTTAAGGCCTGGTGTGGGGGAGTaGGTTTCAATGCCCCTATTT | + |
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Preference number: 2 (lower is better) Translates to: SSPTSQLCSAGTVLNLLRPGVGE*VSMPLF Trigger: AAATAGGGGCATTGAAACTCACTCCCCCACACCAGG...CCTTAACAGGTTCAGAACAGTGCCTGCGCTGCAGAGCTGAGAGGTAGGGCTGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046490.14 ENSMUST00000153700.9 |
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| 3UTR-3UTR GCA 90 bp | AACAATTTCAACGAGTCAACTCCGAGAACACAATGGGCAACCCTCAACCTGAGCCGGCAGTCCCGCCCCTaGAGGCAATGTCCTCCCCTA | + |
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Preference number: 2 (lower is better) Translates to: NNFNESTPRTQWATLNLSRQSRP*RQCPPL Trigger: TAGGGGAGGACATTGCCTGCAGGGGCGGGACTGCCG...GCTCAGGTTGAGGGTTGCCCATTGTGTTCTCGGAGTTGACTCGTTGAAATTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046490.14 ENSMUST00000153700.9 |
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| 3UTR-3UTR GCA 90 bp | CTCTGCAGCGCAGGCACTGTTCTGAACCTGTTAAGGAGGCAGGCAGTACTGTGCAAGCAAGGTCAGACCTaGTTACACCAGGCCAGACAC | + |
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Preference number: 2 (lower is better) Translates to: LCSAGTVLNLLRRQAVLCKQGQT*LHQARH Trigger: GTGTCTGGCCTGGTGTAAGCAGGTCTGACCTTGCTT...GCACAGTACTGCCTGCCTCCTTAACAGGTTCAGAACAGTGCCTGCGCTGCAGAG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046490.14 ENSMUST00000153700.9 |
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| 3UTR-3UTR CCA 90 bp | GCTCTTGCAAGGAAAGAGATCCTGGGGCCTAGGCCACAGAGGCAAGAGCTCTGGGCCAGAAGCTCAAGGTaGAGTGTTGAAGACAACCCA | + |
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Preference number: 2 (lower is better) Translates to: ALARKEILGPRPQRQELWARSSR*SVEDNP Trigger: TGGGTTGTCTTCAACACTCCACCTTGAGCTTCTGGC...CCAGAGCTCTTGCCTCTGTGGCCTAGGCCCCAGGATCTCTTTCCTTGCAAGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046490.14 ENSMUST00000153700.9 |
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| 3UTR-3UTR TCA 90 bp | TCCAGCCCTACCTCTCAGCTCTGCAGCGCAGGCACTGTTCTGAACCTGTTAAGGCTCAAGGTGGAGTGTTaGAGACAACCCAAGGACACT | + |
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Preference number: 2 (lower is better) Translates to: SSPTSQLCSAGTVLNLLRLKVEC*RQPKDT Trigger: AGTGTCCTTGGGTTGTCTTCAACACTCCACCTTGAG...CCTTAACAGGTTCAGAACAGTGCCTGCGCTGCAGAGCTGAGAGGTAGGGCTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046490.14 ENSMUST00000153700.9 |
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| 3UTR-3UTR TCA 90 bp | CTCTGCAGCGCAGGCACTGTTCTGAACCTGTTAAGGAGGCAGGCAGTACTGTGCCTCAAGGTGGAGTGTTaGAGACAACCCAAGGACACT | + |
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Preference number: 2 (lower is better) Translates to: LCSAGTVLNLLRRQAVLCLKVEC*RQPKDT Trigger: AGTGTCCTTGGGTTGTCTTCAACACTCCACCTTGAG...GCACAGTACTGCCTGCCTCCTTAACAGGTTCAGAACAGTGCCTGCGCTGCAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046490.14 ENSMUST00000153700.9 |
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| 3UTR-3UTR CCA 90 bp | TTCAACGAGTCAACTCCGAGAACACAATGGGCAACCCTCAACCTGAGCCCCTCAACTCCGAGAACACAATaGGCAACCCTCAACCTGAGC | + |
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Preference number: 2 (lower is better) Translates to: FNESTPRTQWATLNLSPSTPRTQ*ATLNLS Trigger: GCTCAGGTTGAGGGTTGCCCATTGTGTTCTCGGAGT...TGAGGGGCTCAGGTTGAGGGTTGCCCATTGTGTTCTCGGAGTTGACTCGTTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046490.14 ENSMUST00000128664.2 ENSMUST00000153700.9 |
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| 3UTR-3UTR GCA 90 bp | CTGTGGCTCTTAGGCAAAGCATCCTCTGTGACCATTAGTCCTCATCAGACAAGTCCTCTGTCCCAAGGCTaGCTAACTTCCCCTCTTCCC | + |
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Preference number: 2 (lower is better) Translates to: LWLLGKASSVTISPHQTSPLSQG*LTSPLP Trigger: GGGAAGAGGGGAAGTTAGGCAGCCTTGGGACAGAGG...ACTTGTCTGATGAGGACTAATGGTCACAGAGGATGCTTTGCCTAAGAGCCACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128664.2 |
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| 3UTR-3UTR GCA 90 bp | CTCTGCAGCGCAGGCACTGTTCTGAACCTGTTAAGGAGGCAGGCAGTACTGTGCGCCAGCTTAACCAAATaGCAGAATAACACTAAGCTG | + |
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Preference number: 2 (lower is better) Translates to: LCSAGTVLNLLRRQAVLCASLTK*QNNTKL Trigger: CAGCTTAGTGTTATTCTGGCATTTGGTTAAGCTGGC...GCACAGTACTGCCTGCCTCCTTAACAGGTTCAGAACAGTGCCTGCGCTGCAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046490.14 ENSMUST00000153700.9 |
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| 3UTR CAA 90 bp | TTACACCAGGCCAGACACAAAATGCCAGAAGCTCAAGGTGGAGTGTaGAAGACAACCCAAGGACACTGCCCAGGAGCTAAAGCCTATACT | + |
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Preference number: 2 (lower is better) Translates to: LHQARHKMPEAQGGV*KTTQGHCPGAKAYT Trigger: AGTATAGGCTTTAGCTCCTGGGCAGTGTCCTTGGGTTGTCTTCAACACTCCACCTTGAGCTTCTGGCATTTTGTGTCTGGCCTGGTGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046490.14 ENSMUST00000153700.9 |
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| 3UTR-3UTR CCA 90 bp | CTGTGGCTCTTAGGCAAAGCATCCTCTGTGACCATTAGTCCTCATCAGACAAGTACTCCGAGAACACAATaGGCAACCCTCAACCTGAGC | + |
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Preference number: 2 (lower is better) Translates to: LWLLGKASSVTISPHQTSTPRTQ*ATLNLS Trigger: GCTCAGGTTGAGGGTTGCCCATTGTGTTCTCGGAGT...ACTTGTCTGATGAGGACTAATGGTCACAGAGGATGCTTTGCCTAAGAGCCACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128664.2 |
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| 3UTR-3UTR CCA 90 bp | TTTAGAACAAGCTGTTTGGTGAAAGCAGTAAAAGGCAGGCCATTTCTGCAGTCCACTCCGAGAACACAATaGGCAACCCTCAACCTGAGC | + |
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Preference number: 2 (lower is better) Translates to: FRTSCLVKAVKGRPFLQSTPRTQ*ATLNLS Trigger: GCTCAGGTTGAGGGTTGCCCATTGTGTTCTCGGAGT...GGACTGCAGAAATGGCCTGCCTTTTACTGCTTTCACCAAACAGCTTGTTCTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046490.14 ENSMUST00000153700.9 |
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| 3UTR-3UTR TCA 90 bp | TCTTTATGGAAAACAATTTCAACGAGTCAACTCCGAGAACACAATGGGCAACCCCAAAGCCCAAGAAGCTaGACGTCTTCAGGAGTGGAG | + |
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Preference number: 2 (lower is better) Translates to: SLWKTISTSQLREHNGQPQSPRS*TSSGVE Trigger: CTCCACTCCTGAAGACGTTCAGCTTCTTGGGCTTTG...GGGTTGCCCATTGTGTTCTCGGAGTTGACTCGTTGAAATTGTTTTCCATAAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128664.2 |
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| 3UTR-3UTR GCA 90 bp | TTTAGAACAAGCTGTTTGGTGAAAGCAGTAAAAGGCAGGCCATTTCTGCAGTCCACAACCCAAGGACACTaGCCAGGAGCTAAAGCCTAT | + |
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Preference number: 2 (lower is better) Translates to: FRTSCLVKAVKGRPFLQSTTQGH*PGAKAY Trigger: ATAGGCTTTAGCTCCTGGGCAGTGTCCTTGGGTTGT...GGACTGCAGAAATGGCCTGCCTTTTACTGCTTTCACCAAACAGCTTGTTCTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046490.14 ENSMUST00000153700.9 |
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| 3UTR-3UTR CCA 90 bp | TTTATGGAAAACAATTTCAACGAGTCAACTCCGAGAACACAATGGGCAACCCTCCATAAACATCACATCTaGCCGAGAGGGGACACAGGG | + |
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Preference number: 2 (lower is better) Translates to: FMENNFNESTPRTQWATLHKHHI*PRGDTG Trigger: CCCTGTGTCCCCTCTCGGCCAGATGTGATGTTTATG...GAGGGTTGCCCATTGTGTTCTCGGAGTTGACTCGTTGAAATTGTTTTCCATAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128664.2 |
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| 3UTR-3UTR CCA 90 bp | GTTTATTGTGGTCACACTGACAGGAATACTCTGAGCCCAGTTTCCTCAATAAACTGGAGACAGAGGCAGTaGATCTCTGAGTTCAAGGCT | + |
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Preference number: 2 (lower is better) Translates to: VYCGHTDRNTLSPVSSINWRQRQ*ISEFKA Trigger: AGCCTTGAACTCAGAGATCCACTGCCTCTGTCTCCA...GTTTATTGAGGAAACTGGGCTCAGAGTATTCCTGTCAGTGTGACCACAATAAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136166.3 |
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| 3UTR-3UTR TCA 90 bp | TTTATGGAAAACAATTTCAACGAGTCAACTCCGAGAACACAATGGGCAACCCTCGCAAAGCATCCTCTGTaGCCATTAGTCCTCATCAGA | + |
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Preference number: 2 (lower is better) Translates to: FMENNFNESTPRTQWATLAKHPL*PLVLIR Trigger: TCTGATGAGGACTAATGGTCACAGAGGATGCTTTGC...GAGGGTTGCCCATTGTGTTCTCGGAGTTGACTCGTTGAAATTGTTTTCCATAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128664.2 |
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| 3UTR-3UTR GCA 90 bp | TTTAGAACAAGCTGTTTGGTGAAAGCAGTAAAAGGCAGGCCATTTCTGCAGTCCGGTATTCTTCCTCTCTaGTCTTGCAAGGAAAGAGAT | + |
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Preference number: 2 (lower is better) Translates to: FRTSCLVKAVKGRPFLQSGILPL*SCKERD Trigger: ATCTCTTTCCTTGCAAGAGCAGAGAGGAAGAATACC...GGACTGCAGAAATGGCCTGCCTTTTACTGCTTTCACCAAACAGCTTGTTCTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046490.14 ENSMUST00000153700.9 |
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| 3UTR-3UTR CAA 90 bp | GTACTGTGCTTGGCCAGCCAGAGGCATCCAGGCGCTAAGAACAGGCTCCCCCACTCTTCCTCTCTGCTCTaGCAAGGAAAGAGATCCTGG | + |
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Preference number: 3 (lower is better) Translates to: VLCLASQRHPGAKNRLPHSSSLL*QGKRSW Trigger: CCAGGATCTCTTTCCTTGCAAGAGCAGAGAGGAAGA...GTGGGGGAGCCTGTTCTTAGCGCCTGGATGCCTCTGGCTGGCCAAGCACAGTAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046490.14 ENSMUST00000153700.9 |
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| 3UTR GCA 72 bp | AGGCCATTTCTGCAGTCCAGCCCTACCTCTCAGCTCTaGAGCGCAGGCACTGTTCTGAACCTGTTAAGGAGG | + |
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Preference number: 3 (lower is better) Translates to: RPFLQSSPTSQL*SAGTVLNLLRR Trigger: CCTCCTTAACAGGTTCAGAACAGTGCCTGCGCTGCAGAGCTGAGAGGTAGGGCTGGACTGCAGAAATGGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046490.14 ENSMUST00000153700.9 |
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| 3UTR CCA 72 bp | GTTCTGGTCCAGGGGGTAAACCATAAACATCACATCTaGCCGAGAGGGGACACAGGGATGACCTGGACGCAC | + |
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Preference number: 3 (lower is better) Translates to: VLVQGVNHKHHI*PRGDTGMTWTH Trigger: GTGCGTCCAGGTCATCCCTGTGTCCCCTCTCGGCCAGATGTGATGTTTATGGTTTACCCCCTGGACCAGAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000128664.2 |
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| 3UTR-3UTR CAA 90 bp | GTACTGTGCTTGGCCAGCCAGAGGCATCCAGGCGCTAAGAACAGGCTCCCCCACAGCTCTGGTGGTAACTaGAGATGTAGTTTGGCTAGT | + |
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Preference number: 3 (lower is better) Translates to: VLCLASQRHPGAKNRLPHSSGGN*RCSLAS Trigger: ACTAGCCAAACTACATCTCAAGTTACCACCAGAGCT...GTGGGGGAGCCTGTTCTTAGCGCCTGGATGCCTCTGGCTGGCCAAGCACAGTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046490.14 ENSMUST00000153700.9 |
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| 3UTR GCA 72 bp | ACTGTTCTGAACCTGTTAAGGAGGCAGGCAGTACTGTaGTTGGCCAGCCAGAGGCATCCAGGCGCTAAGAAC | + |
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Preference number: 3 (lower is better) Translates to: TVLNLLRRQAVL*LASQRHPGAKN Trigger: GTTCTTAGCGCCTGGATGCCTCTGGCTGGCCAAGCACAGTACTGCCTGCCTCCTTAACAGGTTCAGAACAGT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046490.14 ENSMUST00000153700.9 |
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| 3UTR TCA 72 bp | AGTCAACTCCGAGAACACAATGGGCAACCCTCAACCTaGGCCCCTCAATGTCCTTCCCTAGACAGCCAGAGA | + |
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Preference number: 3 (lower is better) Translates to: SQLREHNGQPST*APQCPSLDSQR Trigger: TCTCTGGCTGTCTAGGGAAGGACATTGAGGGGCTCAGGTTGAGGGTTGCCCATTGTGTTCTCGGAGTTGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046490.14 ENSMUST00000128664.2 ENSMUST00000153700.9 |
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| 3UTR GCA 72 bp | GCTCAAGGTGGAGTGTTGAAGACAACCCAAGGACACTaGCCAGGAGCTAAAGCCTATACTCAGGAGCCCCTA | + |
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Preference number: 3 (lower is better) Translates to: AQGGVLKTTQGH*PGAKAYTQEPL Trigger: TAGGGGCTCCTGAGTATAGGCTTTAGCTCCTGGGCAGTGTCCTTGGGTTGTCTTCAACACTCCACCTTGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046490.14 ENSMUST00000153700.9 |
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| 3UTR CCA 72 bp | ACACCAGGCCAGACACAAAATGCCAGAAGCTCAAGGTaGAGTGTTGAAGACAACCCAAGGACACTGCCCAGG | + |
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Preference number: 3 (lower is better) Translates to: TPGQTQNARSSR*SVEDNPRTLPR Trigger: CCTGGGCAGTGTCCTTGGGTTGTCTTCAACACTCCACCTTGAGCTTCTGGCATTTTGTGTCTGGCCTGGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046490.14 ENSMUST00000153700.9 |
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| 3UTR TCA 72 bp | CCAGACACAAAATGCCAGAAGCTCAAGGTGGAGTGTTaGAGACAACCCAAGGACACTGCCCAGGAGCTAAAG | + |
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Preference number: 3 (lower is better) Translates to: PDTKCQKLKVEC*RQPKDTAQELK Trigger: CTTTAGCTCCTGGGCAGTGTCCTTGGGTTGTCTTCAACACTCCACCTTGAGCTTCTGGCATTTTGTGTCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046490.14 ENSMUST00000153700.9 |
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| 3UTR CCA 72 bp | GAAAACAATTTCAACGAGTCAACTCCGAGAACACAATaGGCAACCCTCAACCTGAGCCCCTCAATGTCCTTC | + |
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Preference number: 3 (lower is better) Translates to: ENNFNESTPRTQ*ATLNLSPSMSF Trigger: GAAGGACATTGAGGGGCTCAGGTTGAGGGTTGCCCATTGTGTTCTCGGAGTTGACTCGTTGAAATTGTTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046490.14 ENSMUST00000128664.2 ENSMUST00000153700.9 |
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| CDS-3UTR TCA 90 bp | TGGCCAGCCAGAGGCATCCAGGCGCTAAGAACAGGCTCCCCCACAAACCCCAGGATCTTCGACAGTGGGTaGGGGGCATCGCACCACAGA | + |
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Preference number: 4 (lower is better) Translates to: WPARGIQALRTGSPTNPRIFDSG*GASHHR Trigger: TCTGTGGTGCGATGCCCCTCACCCACTGTCGAAGAT...CCTGGGGTTTGTGGGGGAGCCTGTTCTTAGCGCCTGGATGCCTCTGGCTGGCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000046490.14 |
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| CDS-3UTR GCA 90 bp | TCCAGCCCTACCTCTCAGCTCTGCAGCGCAGGCACTGTTCTGAACCTGTTAAGGAGAGAGAAGGATCCCTaGCGCCCCCTCGCCCACCGG | + |
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Preference number: 4 (lower is better) Translates to: SSPTSQLCSAGTVLNLLRREKDP*RPLAHR Trigger: CCGGTGGGCGAGGGGGCGGCAGGGATCCTTCTCTCT...CCTTAACAGGTTCAGAACAGTGCCTGCGCTGCAGAGCTGAGAGGTAGGGCTGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046490.14 ENSMUST00000153700.9 |
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| CDS-3UTR CCA 90 bp | TGGCCAGCCAGAGGCATCCAGGCGCTAAGAACAGGCTCCCCCACAAACCCCAGGCAAACAGGCTCTGGCTaGACAGGACTGCATCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: WPARGIQALRTGSPTNPRQTGSG*TGLHPR Trigger: CCTGGGATGCAGTCCTGTCCAGCCAGAGCCTGTTTG...CCTGGGGTTTGTGGGGGAGCCTGTTCTTAGCGCCTGGATGCCTCTGGCTGGCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046490.14 ENSMUST00000153700.9 |
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| CDS-3UTR TCA 90 bp | GCCCAACTCCAAGGAGACCTGAGCCTGACAGTCCTGCCCACCAGCCCTCCAGGCCAAAGCCCAAGAAGCTaGACGTCTTCAGGAGTGGAG | + |
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Preference number: 4 (lower is better) Translates to: AQLQGDLSLTVLPTSPPGQSPRS*TSSGVE Trigger: CTCCACTCCTGAAGACGTTCAGCTTCTTGGGCTTTG...GCCTGGAGGGCTGGTGGGCAGGACTGTCAGGCTCAGGTCTCCTTGGAGTTGGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046490.14 ENSMUST00000153700.9 |
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| CDS-3UTR GCA 90 bp | CGAGTCAACTCCGAGAACACAATGGGCAACCCTCAACCTGAGCCCCTCAATGTCAGAGAGAAGGATCCCTaGCGCCCCCTCGCCCACCGG | + |
|
Preference number: 4 (lower is better) Translates to: RVNSENTMGNPQPEPLNVREKDP*RPLAHR Trigger: CCGGTGGGCGAGGGGGCGGCAGGGATCCTTCTCTCT...GACATTGAGGGGCTCAGGTTGAGGGTTGCCCATTGTGTTCTCGGAGTTGACTCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046490.14 ENSMUST00000153700.9 |
||
| CDS-3UTR CCA 90 bp | TGGCCAGCCAGAGGCATCCAGGCGCTAAGAACAGGCTCCCCCACAAACCCCAGGATGTGCCTGCAGCACTaGAGCTGGGGACACTTACTC | + |
|
Preference number: 4 (lower is better) Translates to: WPARGIQALRTGSPTNPRMCLQH*SWGHLL Trigger: GAGTAAGTGTCCCCAGCTCCAGTGCTGCAGGCACAT...CCTGGGGTTTGTGGGGGAGCCTGTTCTTAGCGCCTGGATGCCTCTGGCTGGCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000046490.14 ENSMUST00000153700.9 |
||
| CDS-3UTR CCA 90 bp | GTACTGTGCTTGGCCAGCCAGAGGCATCCAGGCGCTAAGAACAGGCTCCCCCACGCACCACAGAGGCCCTaGAACAATGTGCCTGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VLCLASQRHPGAKNRLPHAPQRP*NNVPAA Trigger: TGCTGCAGGCACATTGTTCCAGGGCCTCTGTGGTGC...GTGGGGGAGCCTGTTCTTAGCGCCTGGATGCCTCTGGCTGGCCAAGCACAGTAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046490.14 ENSMUST00000153700.9 |
||
| CDS-3UTR CCA 90 bp | GCCCAACTCCAAGGAGACCTGAGCCTGACAGTCCTGCCCACCAGCCCTCCAGGCCATAAACATCACATCTaGCCGAGAGGGGACACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: AQLQGDLSLTVLPTSPPGHKHHI*PRGDTG Trigger: CCCTGTGTCCCCTCTCGGCCAGATGTGATGTTTATG...GCCTGGAGGGCTGGTGGGCAGGACTGTCAGGCTCAGGTCTCCTTGGAGTTGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046490.14 ENSMUST00000153700.9 |
||
| CDS-3UTR TCA 90 bp | GAAGAAAGCCCAACTCCAAGGAGACCTGAGCCTGACAGTCCTGCCCACCAGCCCGAGGGGACACAGGGATaGCCTGGACGCACAATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: EESPTPRRPEPDSPAHQPEGTQG*PGRTIS Trigger: TGAGATTGTGCGTCCAGGTCATCCCTGTGTCCCCTC...GGGCTGGTGGGCAGGACTGTCAGGCTCAGGTCTCCTTGGAGTTGGGCTTTCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046490.14 ENSMUST00000153700.9 |
||
| CDS-3UTR CCA 90 bp | TGGCCAGCCAGAGGCATCCAGGCGCTAAGAACAGGCTCCCCCACAAACCCCAGGTCTACAAACAGGCTCTaGCTGGACAGGACTGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: WPARGIQALRTGSPTNPRSTNRL*LDRTAS Trigger: GGATGCAGTCCTGTCCAGCCAGAGCCTGTTTGTAGA...CCTGGGGTTTGTGGGGGAGCCTGTTCTTAGCGCCTGGATGCCTCTGGCTGGCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046490.14 ENSMUST00000153700.9 |
||
| CDS-3UTR TCA 90 bp | GTACTGTGCTTGGCCAGCCAGAGGCATCCAGGCGCTAAGAACAGGCTCCCCCACAGACCTTCACCTCGGTaGCCTCATACTGGAAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VLCLASQRHPGAKNRLPHRPSPR*PHTGSG Trigger: TCCACTTCCAGTATGAGGTCACCGAGGTGAAGGTCT...GTGGGGGAGCCTGTTCTTAGCGCCTGGATGCCTCTGGCTGGCCAAGCACAGTAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046490.14 ENSMUST00000153700.9 |
||
| CDS-3UTR GCA 90 bp | TCCAGCCCTACCTCTCAGCTCTGCAGCGCAGGCACTGTTCTGAACCTGTTAAGGGGCCCTGGAACAATGTaGCTGCAGCACTGGAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SSPTSQLCSAGTVLNLLRGPGTM*LQHWSW Trigger: CCAGCTCCAGTGCTGCAGGCACATTGTTCCAGGGCC...CCTTAACAGGTTCAGAACAGTGCCTGCGCTGCAGAGCTGAGAGGTAGGGCTGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046490.14 ENSMUST00000153700.9 |
||
| CDS-3UTR CCA 90 bp | GCTCTTGCAAGGAAAGAGATCCTGGGGCCTAGGCCACAGAGGCAAGAGCTCTGGCTGCAGCACTGGAGCTaGGGACACTTACTCAACGGC | + |
|
Preference number: 4 (lower is better) Translates to: ALARKEILGPRPQRQELWLQHWS*GHLLNG Trigger: GCCGTTGAGTAAGTGTCCCCAGCTCCAGTGCTGCAG...CCAGAGCTCTTGCCTCTGTGGCCTAGGCCCCAGGATCTCTTTCCTTGCAAGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046490.14 ENSMUST00000153700.9 |
||
| CDS-3UTR CCA 90 bp | GTACTGTGCTTGGCCAGCCAGAGGCATCCAGGCGCTAAGAACAGGCTCCCCCACCATAAACATCACATCTaGCCGAGAGGGGACACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: VLCLASQRHPGAKNRLPHHKHHI*PRGDTG Trigger: CCCTGTGTCCCCTCTCGGCCAGATGTGATGTTTATG...GTGGGGGAGCCTGTTCTTAGCGCCTGGATGCCTCTGGCTGGCCAAGCACAGTAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046490.14 ENSMUST00000153700.9 |
||
| CDS-3UTR TCA 90 bp | GAAGAAAGCCCAACTCCAAGGAGACCTGAGCCTGACAGTCCTGCCCACCAGCCCAGACCTTCACCTCGGTaGCCTCATACTGGAAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: EESPTPRRPEPDSPAHQPRPSPR*PHTGSG Trigger: TCCACTTCCAGTATGAGGTCACCGAGGTGAAGGTCT...GGGCTGGTGGGCAGGACTGTCAGGCTCAGGTCTCCTTGGAGTTGGGCTTTCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046490.14 ENSMUST00000153700.9 |
||
| CDS-3UTR TCA 90 bp | TCCAGCCCTACCTCTCAGCTCTGCAGCGCAGGCACTGTTCTGAACCTGTTAAGGGAGGGGACACAGGGATaGCCTGGACGCACAATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SSPTSQLCSAGTVLNLLREGTQG*PGRTIS Trigger: TGAGATTGTGCGTCCAGGTCATCCCTGTGTCCCCTC...CCTTAACAGGTTCAGAACAGTGCCTGCGCTGCAGAGCTGAGAGGTAGGGCTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046490.14 ENSMUST00000153700.9 |
||
| CDS-3UTR TCA 90 bp | GAGTCAACTCCGAGAACACAATGGGCAACCCTCAACCTGAGCCCCTCAATGTCCATCTTCGACAGTGGGTaGGGGGCATCGGAGCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: ESTPRTQWATLNLSPSMSIFDSG*GASEHH Trigger: GTGGTGCTCCGATGCCCCTCACCCACTGTCGAAGAT...GGACATTGAGGGGCTCAGGTTGAGGGTTGCCCATTGTGTTCTCGGAGTTGACTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000153700.9 |
||
| CDS-3UTR GCA 90 bp | CTCACACCTTTAATCTCAGCACTCTGGAGACAGAGGCAGTGGATCTCTGAGTTCAGAGAGAAGGATCCCTaGCGCCCCCTCGCCCACCGG | + |
|
Preference number: 4 (lower is better) Translates to: LTPLISALWRQRQWISEFREKDP*RPLAHR Trigger: CCGGTGGGCGAGGGGGCGGCAGGGATCCTTCTCTCT...GAACTCAGAGATCCACTGCCTCTGTCTCCAGAGTGCTGAGATTAAAGGTGTGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000136166.3 |
||
| CDS-3UTR CCA 90 bp | CGAGTCAACTCCGAGAACACAATGGGCAACCCTCAACCTGAGCCCCTCAATGTCGGGGATCTTCGACAGTaGGTGAGGGGCATCGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: RVNSENTMGNPQPEPLNVGDLRQ*VRGIAP Trigger: TGGTGCGATGCCCCTCACCCACTGTCGAAGATCCCC...GACATTGAGGGGCTCAGGTTGAGGGTTGCCCATTGTGTTCTCGGAGTTGACTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000046490.14 |
||
| CDS-3UTR GCA 90 bp | ATGCCAGAAGCTCAAGGTGGAGTGTTGAAGACAACCCAAGGACACTGCCCAGGAGGCCCTGGAACAATGTaGCTGCAGCACTGGAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: MPEAQGGVLKTTQGHCPGGPGTM*LQHWSW Trigger: CCAGCTCCAGTGCTGCAGGCACATTGTTCCAGGGCC...TCCTGGGCAGTGTCCTTGGGTTGTCTTCAACACTCCACCTTGAGCTTCTGGCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046490.14 ENSMUST00000153700.9 |
||
| CDS-3UTR CCA 90 bp | CGAGTCAACTCCGAGAACACAATGGGCAACCCTCAACCTGAGCCCCTCAATGTCGCACCACAGAGGCCCTaGAACAATGTGCCTGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RVNSENTMGNPQPEPLNVAPQRP*NNVPAA Trigger: TGCTGCAGGCACATTGTTCCAGGGCCTCTGTGGTGC...GACATTGAGGGGCTCAGGTTGAGGGTTGCCCATTGTGTTCTCGGAGTTGACTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046490.14 ENSMUST00000153700.9 |
||
| 3UTR CAA 72 bp | GTTCTGAACCTGTTAAGGAGGCAGGCAGTACTGTGCTaGGCCAGCCAGAGGCATCCAGGCGCTAAGAACAGG | + |
|
Preference number: 4 (lower is better) Translates to: VLNLLRRQAVLC*ASQRHPGAKNR Trigger: CCTGTTCTTAGCGCCTGGATGCCTCTGGCTGGCCAAGCACAGTACTGCCTGCCTCCTTAACAGGTTCAGAAC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046490.14 ENSMUST00000153700.9 |
||
| CDS-3UTR GCA 90 bp | ATGCCAGAAGCTCAAGGTGGAGTGTTGAAGACAACCCAAGGACACTGCCCAGGACTGGAACAATGTGCCTaGAGCACTGGAGCTGGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: MPEAQGGVLKTTQGHCPGLEQCA*STGAGD Trigger: GTCCCCAGCTCCAGTGCTGCAGGCACATTGTTCCAG...TCCTGGGCAGTGTCCTTGGGTTGTCTTCAACACTCCACCTTGAGCTTCTGGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046490.14 ENSMUST00000153700.9 |
||
| CDS-3UTR TCA 90 bp | GCTCTTGCAAGGAAAGAGATCCTGGGGCCTAGGCCACAGAGGCAAGAGCTCTGGGGTCCTGGGTTACAGTaGGCTTCTCGTCCTTATATA | + |
|
Preference number: 4 (lower is better) Translates to: ALARKEILGPRPQRQELWGPGLQ*ASRPYI Trigger: TATATAAGGACGAGAAGCTCACTGTAACCCAGGACC...CCAGAGCTCTTGCCTCTGTGGCCTAGGCCCCAGGATCTCTTTCCTTGCAAGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046490.14 ENSMUST00000153700.9 |
||
| CDS-3UTR CCA 90 bp | TCTCAGCACTCTGGAGACAGAGGCAGTGGATCTCTGAGTTCAAGGCTAGTCTGGATGTGCCTGCAGCACTaGAGCTGGGGACACTTACTC | + |
|
Preference number: 4 (lower is better) Translates to: SQHSGDRGSGSLSSRLVWMCLQH*SWGHLL Trigger: GAGTAAGTGTCCCCAGCTCCAGTGCTGCAGGCACAT...CCAGACTAGCCTTGAACTCAGAGATCCACTGCCTCTGTCTCCAGAGTGCTGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136166.3 |
||
| CDS-3UTR CCA 90 bp | GAGTCAACTCCGAGAACACAATGGGCAACCCTCAACCTGAGCCCCTCAATGTCCGACACAGGGATGACCTaGACGCACAATCTCAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: ESTPRTQWATLNLSPSMSDTGMT*THNLKA Trigger: GGCTTTGAGATTGTGCGTCCAGGTCATCCCTGTGTC...GGACATTGAGGGGCTCAGGTTGAGGGTTGCCCATTGTGTTCTCGGAGTTGACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046490.14 ENSMUST00000153700.9 |
||
| CDS-3UTR TCA 90 bp | GAATACTCTGAGCCCAGTTTCCTCAATAAACTTGAGGCCAGGTTTGGTGGCTCAATCTTCGACAGTGGGTaGGGGGCATCGGAGCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: EYSEPSFLNKLEARFGGSIFDSG*GASEHH Trigger: GTGGTGCTCCGATGCCCCTCACCCACTGTCGAAGAT...TGAGCCACCAAACCTGGCCTCAAGTTTATTGAGGAAACTGGGCTCAGAGTATTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000136166.3 |
||
| CDS-3UTR GCA 90 bp | ACACCTTTAATCTCAGCACTCTGGAGACAGAGGCAGTGGATCTCTGAGTTCAAGGGCCCTGGAACAATGTaGCTGCAGCACTGGAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TPLISALWRQRQWISEFKGPGTM*LQHWSW Trigger: CCAGCTCCAGTGCTGCAGGCACATTGTTCCAGGGCC...CTTGAACTCAGAGATCCACTGCCTCTGTCTCCAGAGTGCTGAGATTAAAGGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136166.3 |
||
| CDS-3UTR CCA 90 bp | CTCACACCTTTAATCTCAGCACTCTGGAGACAGAGGCAGTGGATCTCTGAGTTCCTGCAGCACTGGAGCTaGGGACACTTACTCAACGGC | + |
|
Preference number: 4 (lower is better) Translates to: LTPLISALWRQRQWISEFLQHWS*GHLLNG Trigger: GCCGTTGAGTAAGTGTCCCCAGCTCCAGTGCTGCAG...GAACTCAGAGATCCACTGCCTCTGTCTCCAGAGTGCTGAGATTAAAGGTGTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136166.3 |
||
| CDS-3UTR CCA 90 bp | CCTTTAATCTCAGCACTCTGGAGACAGAGGCAGTGGATCTCTGAGTTCAAGGCTGCACCACAGAGGCCCTaGAACAATGTGCCTGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PLISALWRQRQWISEFKAAPQRP*NNVPAA Trigger: TGCTGCAGGCACATTGTTCCAGGGCCTCTGTGGTGC...AGCCTTGAACTCAGAGATCCACTGCCTCTGTCTCCAGAGTGCTGAGATTAAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136166.3 |
||
| CDS-3UTR CCA 90 bp | CTCACACCTTTAATCTCAGCACTCTGGAGACAGAGGCAGTGGATCTCTGAGTTCCAAACAGGCTCTGGCTaGACAGGACTGCATCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LTPLISALWRQRQWISEFQTGSG*TGLHPR Trigger: CCTGGGATGCAGTCCTGTCCAGCCAGAGCCTGTTTG...GAACTCAGAGATCCACTGCCTCTGTCTCCAGAGTGCTGAGATTAAAGGTGTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136166.3 |
||
| CDS-3UTR CCA 90 bp | ATGCCAGAAGCTCAAGGTGGAGTGTTGAAGACAACCCAAGGACACTGCCCAGGATCTACAAACAGGCTCTaGCTGGACAGGACTGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: MPEAQGGVLKTTQGHCPGSTNRL*LDRTAS Trigger: GGATGCAGTCCTGTCCAGCCAGAGCCTGTTTGTAGA...TCCTGGGCAGTGTCCTTGGGTTGTCTTCAACACTCCACCTTGAGCTTCTGGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046490.14 ENSMUST00000153700.9 |
||
| 3UTR CAA 72 bp | GGCCTAGGCCACAGAGGCAAGAGCTCTGGTGGTAACTaGAGATGTAGTTTGGCTAGTTTCTTAAGGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GLGHRGKSSGGN*RCSLASFLRPR Trigger: CCTGGGCCTTAAGAAACTAGCCAAACTACATCTCAAGTTACCACCAGAGCTCTTGCCTCTGTGGCCTAGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046490.14 ENSMUST00000153700.9 |
||
| CDS-3UTR TCA 90 bp | GAGTCAACTCCGAGAACACAATGGGCAACCCTCAACCTGAGCCCCTCAATGTCCTGGAAGTGGACGATGTaGGGTTTTCCATCGTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: ESTPRTQWATLNLSPSMSWKWTM*GFPSFT Trigger: TGTGAACGATGGAAAACCTCACATCGTCCACTTCCA...GGACATTGAGGGGCTCAGGTTGAGGGTTGCCCATTGTGTTCTCGGAGTTGACTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046490.14 ENSMUST00000128664.2 ENSMUST00000153700.9 |
||
| CDS-3UTR CCA 90 bp | AACAATTTCAACGAGTCAACTCCGAGAACACAATGGGCAACCCTCAACCTGAGCCAAACAGGCTCTGGCTaGACAGGACTGCATCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: NNFNESTPRTQWATLNLSQTGSG*TGLHPR Trigger: CCTGGGATGCAGTCCTGTCCAGCCAGAGCCTGTTTG...GCTCAGGTTGAGGGTTGCCCATTGTGTTCTCGGAGTTGACTCGTTGAAATTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046490.14 ENSMUST00000128664.2 ENSMUST00000153700.9 |
||
| CDS-3UTR CCA 90 bp | AACAATTTCAACGAGTCAACTCCGAGAACACAATGGGCAACCCTCAACCTGAGCGAACGTCTTCAGGAGTaGAGCTCTGTCTTCCCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: NNFNESTPRTQWATLNLSERLQE*SSVFPA Trigger: GGCCGGGAAGACAGAGCTCCACTCCTGAAGACGTTC...GCTCAGGTTGAGGGTTGCCCATTGTGTTCTCGGAGTTGACTCGTTGAAATTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046490.14 ENSMUST00000153700.9 |
||
| CDS-3UTR TCA 90 bp | GAATACTCTGAGCCCAGTTTCCTCAATAAACTTGAGGCCAGGTTTGGTGGCTCAAGACCTTCACCTCGGTaGCCTCATACTGGAAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: EYSEPSFLNKLEARFGGSRPSPR*PHTGSG Trigger: TCCACTTCCAGTATGAGGTCACCGAGGTGAAGGTCT...TGAGCCACCAAACCTGGCCTCAAGTTTATTGAGGAAACTGGGCTCAGAGTATTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136166.3 |
||
| CDS-3UTR GCA 90 bp | CTGTGGCTCTTAGGCAAAGCATCCTCTGTGACCATTAGTCCTCATCAGACAAGTTCAGACTGTTGTGACTaGTCACCTCTGTCTTCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: LWLLGKASSVTISPHQTSSDCCD*SPLSSR Trigger: CCGGGAAGACAGAGGTGAGCAGTCACAACAGTCTGA...ACTTGTCTGATGAGGACTAATGGTCACAGAGGATGCTTTGCCTAAGAGCCACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128664.2 |
||
| CDS-3UTR CCA 90 bp | AACAATTTCAACGAGTCAACTCCGAGAACACAATGGGCAACCCTCAACCTGAGCTCTACAAACAGGCTCTaGCTGGACAGGACTGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: NNFNESTPRTQWATLNLSSTNRL*LDRTAS Trigger: GGATGCAGTCCTGTCCAGCCAGAGCCTGTTTGTAGA...GCTCAGGTTGAGGGTTGCCCATTGTGTTCTCGGAGTTGACTCGTTGAAATTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046490.14 ENSMUST00000128664.2 ENSMUST00000153700.9 |
||
| CDS-3UTR CCA 90 bp | GAATACTCTGAGCCCAGTTTCCTCAATAAACTTGAGGCCAGGTTTGGTGGCTCATCTACAAACAGGCTCTaGCTGGACAGGACTGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: EYSEPSFLNKLEARFGGSSTNRL*LDRTAS Trigger: GGATGCAGTCCTGTCCAGCCAGAGCCTGTTTGTAGA...TGAGCCACCAAACCTGGCCTCAAGTTTATTGAGGAAACTGGGCTCAGAGTATTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136166.3 |
||
| CDS-3UTR GCA 90 bp | GTTTATTGTGGTCACACTGACAGGAATACTCTGAGCCCAGTTTCCTCAATAAACCTGGAACAATGTGCCTaGAGCACTGGAGCTGGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: VYCGHTDRNTLSPVSSINLEQCA*STGAGD Trigger: GTCCCCAGCTCCAGTGCTGCAGGCACATTGTTCCAG...GTTTATTGAGGAAACTGGGCTCAGAGTATTCCTGTCAGTGTGACCACAATAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136166.3 |
||
| CDS-3UTR CCA 90 bp | TTTATGGAAAACAATTTCAACGAGTCAACTCCGAGAACACAATGGGCAACCCTCCTGCAGCACTGGAGCTaGGGACACTTACTCAACGGC | + |
|
Preference number: 4 (lower is better) Translates to: FMENNFNESTPRTQWATLLQHWS*GHLLNG Trigger: GCCGTTGAGTAAGTGTCCCCAGCTCCAGTGCTGCAG...GAGGGTTGCCCATTGTGTTCTCGGAGTTGACTCGTTGAAATTGTTTTCCATAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046490.14 ENSMUST00000153700.9 |
||
| CDS-3UTR CCA 90 bp | TCTTTATGGAAAACAATTTCAACGAGTCAACTCCGAGAACACAATGGGCAACCCGAACGTCTTCAGGAGTaGAGCTCTGTCTTCCCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SLWKTISTSQLREHNGQPERLQE*SSVFPA Trigger: GGCCGGGAAGACAGAGCTCCACTCCTGAAGACGTTC...GGGTTGCCCATTGTGTTCTCGGAGTTGACTCGTTGAAATTGTTTTCCATAAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046490.14 ENSMUST00000153700.9 |
||
| CDS-3UTR TCA 90 bp | TTTAGAACAAGCTGTTTGGTGAAAGCAGTAAAAGGCAGGCCATTTCTGCAGTCCCAAAGCCCAAGAAGCTaGACGTCTTCAGGAGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: FRTSCLVKAVKGRPFLQSQSPRS*TSSGVE Trigger: CTCCACTCCTGAAGACGTTCAGCTTCTTGGGCTTTG...GGACTGCAGAAATGGCCTGCCTTTTACTGCTTTCACCAAACAGCTTGTTCTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046490.14 ENSMUST00000153700.9 |
||
| CDS-3UTR GCA 90 bp | TCTCAGCACTCTGGAGACAGAGGCAGTGGATCTCTGAGTTCAAGGCTAGTCTGGGTAAAAGCCCTTCTTTaGTCCCATCAGCTAATAATC | + |
|
Preference number: 4 (lower is better) Translates to: SQHSGDRGSGSLSSRLVWVKALL*SHQLII Trigger: GATTATTAGCTGATGGGAGCAAAGAAGGGCTTTTAC...CCAGACTAGCCTTGAACTCAGAGATCCACTGCCTCTGTCTCCAGAGTGCTGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136166.3 |
||
| CDS-3UTR CCA 90 bp | TTTAGAACAAGCTGTTTGGTGAAAGCAGTAAAAGGCAGGCCATTTCTGCAGTCCGACACAGGGATGACCTaGACGCACAATCTCAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: FRTSCLVKAVKGRPFLQSDTGMT*THNLKA Trigger: GGCTTTGAGATTGTGCGTCCAGGTCATCCCTGTGTC...GGACTGCAGAAATGGCCTGCCTTTTACTGCTTTCACCAAACAGCTTGTTCTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046490.14 ENSMUST00000153700.9 |
||
| CDS-3UTR TCA 90 bp | TTTATGGAAAACAATTTCAACGAGTCAACTCCGAGAACACAATGGGCAACCCTCAGACCTTCACCTCGGTaGCCTCATACTGGAAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: FMENNFNESTPRTQWATLRPSPR*PHTGSG Trigger: TCCACTTCCAGTATGAGGTCACCGAGGTGAAGGTCT...GAGGGTTGCCCATTGTGTTCTCGGAGTTGACTCGTTGAAATTGTTTTCCATAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046490.14 ENSMUST00000128664.2 ENSMUST00000153700.9 |
||
| CDS-3UTR GCA 90 bp | GAGTCAACTCCGAGAACACAATGGGCAACCCTCAACCTGAGCCCCTCAATGTCCCTAATAATCCTTCTTTaGTCCCATCAGCTAATAATC | + |
|
Preference number: 4 (lower is better) Translates to: ESTPRTQWATLNLSPSMSLIILL*SHQLII Trigger: GATTATTAGCTGATGGGAGCAAAGAAGGATTATTAG...GGACATTGAGGGGCTCAGGTTGAGGGTTGCCCATTGTGTTCTCGGAGTTGACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046490.14 ENSMUST00000128664.2 ENSMUST00000153700.9 |
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| CDS-3UTR TCA 90 bp | TTTAGAACAAGCTGTTTGGTGAAAGCAGTAAAAGGCAGGCCATTTCTGCAGTCCGGTCCTGGGTTACAGTaGGCTTCTCGTCCTTATATA | + |
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Preference number: 4 (lower is better) Translates to: FRTSCLVKAVKGRPFLQSGPGLQ*ASRPYI Trigger: TATATAAGGACGAGAAGCTCACTGTAACCCAGGACC...GGACTGCAGAAATGGCCTGCCTTTTACTGCTTTCACCAAACAGCTTGTTCTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046490.14 ENSMUST00000153700.9 |
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| CDS-3UTR GCA 90 bp | TTCAACGAGTCAACTCCGAGAACACAATGGGCAACCCTCAACCTGAGCCCCTCACTAATAATCCTTCTTTaGTCCCATCAGCTAATAATC | + |
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Preference number: 4 (lower is better) Translates to: FNESTPRTQWATLNLSPSLIILL*SHQLII Trigger: GATTATTAGCTGATGGGAGCAAAGAAGGATTATTAG...TGAGGGGCTCAGGTTGAGGGTTGCCCATTGTGTTCTCGGAGTTGACTCGTTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046490.14 ENSMUST00000128664.2 ENSMUST00000153700.9 |
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| CDS-3UTR TCA 90 bp | GTTTATTGTGGTCACACTGACAGGAATACTCTGAGCCCAGTTTCCTCAATAAACGGTCCTGGGTTACAGTaGGCTTCTCGTCCTTATATA | + |
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Preference number: 4 (lower is better) Translates to: VYCGHTDRNTLSPVSSINGPGLQ*ASRPYI Trigger: TATATAAGGACGAGAAGCTCACTGTAACCCAGGACC...GTTTATTGAGGAAACTGGGCTCAGAGTATTCCTGTCAGTGTGACCACAATAAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136166.3 |
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| CDS-3UTR GCA 90 bp | TCTTTATGGAAAACAATTTCAACGAGTCAACTCCGAGAACACAATGGGCAACCCCTAATAATCCTTCTTTaGTCCCATCAGCTAATAATC | + |
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Preference number: 4 (lower is better) Translates to: SLWKTISTSQLREHNGQPLIILL*SHQLII Trigger: GATTATTAGCTGATGGGAGCAAAGAAGGATTATTAG...GGGTTGCCCATTGTGTTCTCGGAGTTGACTCGTTGAAATTGTTTTCCATAAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046490.14 ENSMUST00000128664.2 ENSMUST00000153700.9 |
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| CDS CCA 90 bp | GCATCGGAGCACCACAGAGGCCCTGGAACAATGTGCCTGCAGCACTaGAGCTGGGGACACTTACTCAACGGCAAAATACTACTGTCCTGG | + |
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Preference number: 5 (lower is better) Translates to: ASEHHRGPGTMCLQH*SWGHLLNGKILLSW Trigger: CCAGGACAGTAGTATTTTGCCGTTGAGTAAGTGTCCCCAGCTCCAGTGCTGCAGGCACATTGTTCCAGGGCCTCTGTGGTGCTCCGATGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000136166.3 ENSMUST00000153700.9 |
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| CDS CCA 90 bp | TCGCACCACAGAGGCCCTGGAACAATGTGCCTGCAGCACTGGAGCTaGGGACACTTACTCAACGGCAAAATACTACTGTCCTGGGTGTTT | + |
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Preference number: 5 (lower is better) Translates to: SHHRGPGTMCLQHWS*GHLLNGKILLSWVF Trigger: AAACACCCAGGACAGTAGTATTTTGCCGTTGAGTAAGTGTCCCCAGCTCCAGTGCTGCAGGCACATTGTTCCAGGGCCTCTGTGGTGCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046490.14 |
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| CDS CCA 90 bp | GAGCACCACAGAGGCCCTGGAACAATGTGCCTGCAGCACTGGAGCTaGGGACACTTACTCAACGGCAAAATACTACTGTCCTGGGTGTTT | + |
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Preference number: 5 (lower is better) Translates to: EHHRGPGTMCLQHWS*GHLLNGKILLSWVF Trigger: AAACACCCAGGACAGTAGTATTTTGCCGTTGAGTAAGTGTCCCCAGCTCCAGTGCTGCAGGCACATTGTTCCAGGGCCTCTGTGGTGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000136166.3 ENSMUST00000153700.9 |
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| CDS TCA 90 bp | GAAGAGACCTTCACCTCGGTGACCTCATACTGGAAGTGGACGATGTaGGGTTTTCCATCGTTCACAGGGAGGTCCTGGGTTACAGTGAGC | + |
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Preference number: 5 (lower is better) Translates to: EETFTSVTSYWKWTM*GFPSFTGRSWVTVS Trigger: GCTCACTGTAACCCAGGACCTCCCTGTGAACGATGGAAAACCTCACATCGTCCACTTCCAGTATGAGGTCACCGAGGTGAAGGTCTCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000046490.14 ENSMUST00000128664.2 ENSMUST00000136166.3 ENSMUST00000153700.9 |
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| CDS-3UTR CAA 90 bp | ATGCCAGAAGCTCAAGGTGGAGTGTTGAAGACAACCCAAGGACACTGCCCAGGAGCTAATAATCCTTCTTaGCTCCCATCAGCTAATAAT | + |
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Preference number: 5 (lower is better) Translates to: MPEAQGGVLKTTQGHCPGANNPS*LPSANN Trigger: ATTATTAGCTGATGGGAGCAAAGAAGGATTATTAGC...TCCTGGGCAGTGTCCTTGGGTTGTCTTCAACACTCCACCTTGAGCTTCTGGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046490.14 ENSMUST00000153700.9 |
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| CDS-3UTR CAA 90 bp | TTCAACGAGTCAACTCCGAGAACACAATGGGCAACCCTCAACCTGAGCCCCTCAGCTAATAATCCTTCTTaGCTCCCATCAGCTAATAAT | + |
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Preference number: 5 (lower is better) Translates to: FNESTPRTQWATLNLSPSANNPS*LPSANN Trigger: ATTATTAGCTGATGGGAGCAAAGAAGGATTATTAGC...TGAGGGGCTCAGGTTGAGGGTTGCCCATTGTGTTCTCGGAGTTGACTCGTTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046490.14 ENSMUST00000128664.2 ENSMUST00000153700.9 |
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| CDS-3UTR CAA 90 bp | TTTATGGAAAACAATTTCAACGAGTCAACTCCGAGAACACAATGGGCAACCCTCCCACAACTCTCCAGCTaGGTAAGGCAAATGTACAAC | + |
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Preference number: 5 (lower is better) Translates to: FMENNFNESTPRTQWATLPQLSS*VRQMYN Trigger: GTTGTACATTTGCCTTACCAAGCTGGAGAGTTGTGG...GAGGGTTGCCCATTGTGTTCTCGGAGTTGACTCGTTGAAATTGTTTTCCATAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128664.2 |
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| CDS-3UTR CAA 90 bp | AACAATTTCAACGAGTCAACTCCGAGAACACAATGGGCAACCCTCAACCTGAGCGCTAATAATCCTTCTTaGCTCCCATCAGCTAATAAT | + |
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Preference number: 5 (lower is better) Translates to: NNFNESTPRTQWATLNLSANNPS*LPSANN Trigger: ATTATTAGCTGATGGGAGCAAAGAAGGATTATTAGC...GCTCAGGTTGAGGGTTGCCCATTGTGTTCTCGGAGTTGACTCGTTGAAATTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046490.14 ENSMUST00000128664.2 ENSMUST00000153700.9 |
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| CDS GCA 90 bp | ACACAGTTCCAAGACAATCAGGATGATAAAGTAAAAGCCCTTCTTTaGTCCCATCAGCTAATAATCCATCTGGGATTTCTACAAACAGGC | + |
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Preference number: 5 (lower is better) Translates to: TQFQDNQDDKVKALL*SHQLIIHLGFLQTG Trigger: GCCTGTTTGTAGAAATCCCAGATGGATTATTAGCTGATGGGAGCAAAGAAGGGCTTTTACTTTATCATCCTGATTGTCTTGGAACTGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136166.3 |
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| CDS-3UTR CAA 90 bp | GTTTATTGTGGTCACACTGACAGGAATACTCTGAGCCCAGTTTCCTCAATAAACAGTAAAAGCCCTTCTTaGCTCCCATCAGCTAATAAT | + |
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Preference number: 5 (lower is better) Translates to: VYCGHTDRNTLSPVSSINSKSPS*LPSANN Trigger: ATTATTAGCTGATGGGAGCAAAGAAGGGCTTTTACT...GTTTATTGAGGAAACTGGGCTCAGAGTATTCCTGTCAGTGTGACCACAATAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136166.3 |
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| CDS GCA 72 bp | GGGCATCGCACCACAGAGGCCCTGGAACAATGTGCCTaGAGCACTGGAGCTGGGGACACTTACTCAACGGCA | + |
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Preference number: 6 (lower is better) Translates to: GHRTTEALEQCA*STGAGDTYSTA Trigger: TGCCGTTGAGTAAGTGTCCCCAGCTCCAGTGCTGCAGGCACATTGTTCCAGGGCCTCTGTGGTGCGATGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046490.14 |
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| CDS GCA 72 bp | GGGGCATCGGAGCACCACAGAGGCCCTGGAACAATGTaGCTGCAGCACTGGAGCTGGGGACACTTACTCAAC | + |
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Preference number: 6 (lower is better) Translates to: GASEHHRGPGTM*LQHWSWGHLLN Trigger: GTTGAGTAAGTGTCCCCAGCTCCAGTGCTGCAGGCACATTGTTCCAGGGCCTCTGTGGTGCTCCGATGCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000136166.3 ENSMUST00000153700.9 |
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| CDS GCA 72 bp | CATCGGAGCACCACAGAGGCCCTGGAACAATGTGCCTaGAGCACTGGAGCTGGGGACACTTACTCAACGGCA | + |
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Preference number: 6 (lower is better) Translates to: HRSTTEALEQCA*STGAGDTYSTA Trigger: TGCCGTTGAGTAAGTGTCCCCAGCTCCAGTGCTGCAGGCACATTGTTCCAGGGCCTCTGTGGTGCTCCGATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000136166.3 ENSMUST00000153700.9 |
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| CDS CCA 72 bp | AGAGGCCCTGGAACAATGTGCCTGCAGCACTGGAGCTaGGGACACTTACTCAACGGCAAAATACTACTGTCC | + |
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Preference number: 6 (lower is better) Translates to: RGPGTMCLQHWS*GHLLNGKILLS Trigger: GGACAGTAGTATTTTGCCGTTGAGTAAGTGTCCCCAGCTCCAGTGCTGCAGGCACATTGTTCCAGGGCCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046490.14 ENSMUST00000136166.3 ENSMUST00000153700.9 |
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| CDS CCA 72 bp | CACCACAGAGGCCCTGGAACAATGTGCCTGCAGCACTaGAGCTGGGGACACTTACTCAACGGCAAAATACTA | + |
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Preference number: 6 (lower is better) Translates to: HHRGPGTMCLQH*SWGHLLNGKIL Trigger: TAGTATTTTGCCGTTGAGTAAGTGTCCCCAGCTCCAGTGCTGCAGGCACATTGTTCCAGGGCCTCTGTGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046490.14 ENSMUST00000136166.3 ENSMUST00000153700.9 |
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| CDS TCA 72 bp | TTCACCTCGGTGACCTCATACTGGAAGTGGACGATGTaGGGTTTTCCATCGTTCACAGGGAGGTCCTGGGTT | + |
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Preference number: 6 (lower is better) Translates to: FTSVTSYWKWTM*GFPSFTGRSWV Trigger: AACCCAGGACCTCCCTGTGAACGATGGAAAACCTCACATCGTCCACTTCCAGTATGAGGTCACCGAGGTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000046490.14 ENSMUST00000128664.2 ENSMUST00000136166.3 ENSMUST00000153700.9 |
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| CDS CCA 72 bp | ATAATCCATCTGGGATTTCTACAAACAGGCTCTGGCTaGACAGGACTGCATCCCAGGAAGAGACCTTCACCT | + |
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Preference number: 6 (lower is better) Translates to: IIHLGFLQTGSG*TGLHPRKRPSP Trigger: AGGTGAAGGTCTCTTCCTGGGATGCAGTCCTGTCCAGCCAGAGCCTGTTTGTAGAAATCCCAGATGGATTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000046490.14 ENSMUST00000128664.2 ENSMUST00000136166.3 ENSMUST00000153700.9 |
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| CDS TCA 72 bp | GTTTTCCATCGTTCACAGGGAGGTCCTGGGTTACAGTaGGCTTCTCGTCCTTATATATTAGAGCTGAGAGAG | + |
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Preference number: 6 (lower is better) Translates to: VFHRSQGGPGLQ*ASRPYILELRE Trigger: CTCTCTCAGCTCTAATATATAAGGACGAGAAGCTCACTGTAACCCAGGACCTCCCTGTGAACGATGGAAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046490.14 ENSMUST00000136166.3 ENSMUST00000153700.9 |
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