Pregenerated sensors for OAZ1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035242Ensembl transcript IDs: ENSMUST00000060987.15, ENSMUST00000177850.8, ENSMUST00000179172.8, ENSMUST00000179341.2, ENSMUST00000179620.8, ENSMUST00000180036.8
Found 47 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACAATCACGACATGTGGACTAACCCAGGAGAGGGCACAGGGACACTaGGCAGGGCTGGCACCTAGTCCTCCTCACCCGGGTCCTCTCTCT | + |
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Preference number: 1 (lower is better) Translates to: TITTCGLTQERAQGH*AGLAPSPPHPGPLS Trigger: AGAGAGAGGACCCGGGTGAGGAGGACTAGGTGCCAGCCCTGCCCAGTGTCCCTGTGCCCTCTCCTGGGTTAGTCCACATGTCGTGATTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179341.2 |
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| 3UTR CCA 72 bp | ACATGTGGACTAACCCAGGAGAGGGCACAGGGACACTaGGCAGGGCTGGCACCTAGTCCTCCTCACCCGGGT | + |
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Preference number: 3 (lower is better) Translates to: TCGLTQERAQGH*AGLAPSPPHPG Trigger: ACCCGGGTGAGGAGGACTAGGTGCCAGCCCTGCCCAGTGTCCCTGTGCCCTCTCCTGGGTTAGTCCACATGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179341.2 |
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| 3UTR GCA 72 bp | GGAGGTGACACTATTTTTCCAGACTTCAAAGGAGACTaGTATAGCATAGGTCACCTGACCATCTTAAACAGC | + |
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Preference number: 3 (lower is better) Translates to: GGDTIFPDFKGD*YSIGHLTILNS Trigger: GCTGTTTAAGATGGTCAGGTGACCTATGCTATAGCAGTCTCCTTTGAAGTCTGGAAAAATAGTGTCACCTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000060987.15 ENSMUST00000179341.2 ENSMUST00000180036.8 |
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| 3UTR TCA 72 bp | AACGAGATCACTTTATTGGATTTGAGCCAGGGGAGGTaGCACTATTTTTCCAGACTTCAAAGGAGACTGCTA | + |
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Preference number: 3 (lower is better) Translates to: NEITLLDLSQGR*HYFSRLQRRLL Trigger: TAGCAGTCTCCTTTGAAGTCTGGAAAAATAGTGTCACCTCCCCTGGCTCAAATCCAATAAAGTGATCTCGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000060987.15 ENSMUST00000179341.2 ENSMUST00000180036.8 |
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| CDS-3UTR CCA 90 bp | ATCACGACATGTGGACTAACCCAGGAGAGGGCACAGGGACACTGGGCAGGGCTGGCGGCATGGTGCGGCTaGCGTGAAGCGTGGCGCTGC | + |
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Preference number: 4 (lower is better) Translates to: ITTCGLTQERAQGHWAGLAAWCG*REAWRC Trigger: GCAGCGCCACGCTTCACGCCAGCCGCACCATGCCGC...CAGCCCTGCCCAGTGTCCCTGTGCCCTCTCCTGGGTTAGTCCACATGTCGTGAT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060987.15 ENSMUST00000180036.8 |
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| CDS-3UTR TCA 90 bp | CACAATCACGACATGTGGACTAACCCAGGAGAGGGCACAGGGACACTGGGCAGGCCGCCGCGGCTGTGCTaGCTAAGAAGCGGCATGGTG | + |
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Preference number: 4 (lower is better) Translates to: HNHDMWTNPGEGTGTLGRPPRLC*LRSGMV Trigger: CACCATGCCGCTTCTTAGTCAGCACAGCCGCGGCGG...CCTGCCCAGTGTCCCTGTGCCCTCTCCTGGGTTAGTCCACATGTCGTGATTGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060987.15 ENSMUST00000180036.8 |
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| CDS-3UTR CCA 90 bp | GCGTTTATTCTGCACAATCACGACATGTGGACTAACCCAGGAGAGGGCACAGGGGCGGCATGGTGCGGCTaGCGTGAAGCGTGGCGCTGC | + |
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Preference number: 4 (lower is better) Translates to: AFILHNHDMWTNPGEGTGAAWCG*REAWRC Trigger: GCAGCGCCACGCTTCACGCCAGCCGCACCATGCCGC...CCCTGTGCCCTCTCCTGGGTTAGTCCACATGTCGTGATTGTGCAGAATAAACGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060987.15 ENSMUST00000180036.8 |
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| CDS-3UTR TCA 90 bp | ACTGGGCAGGGCTGGCACCTAGTCCTCCTCACCCGGGTCCTCTCTCTCCAGAGTTCTTGGGGAAGCAGATaGAAACGTGGTCAGCCTGGA | + |
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Preference number: 4 (lower is better) Translates to: TGQGWHLVLLTRVLSLQSSWGSR*KRGQPG Trigger: TCCAGGCTGACCACGTTTTCATCTGCTTCCCCAAGA...ACTCTGGAGAGAGAGGACCCGGGTGAGGAGGACTAGGTGCCAGCCCTGCCCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179341.2 |
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| CDS-3UTR GCA 90 bp | ATCACGACATGTGGACTAACCCAGGAGAGGGCACAGGGACACTGGGCAGGGCTGCGTGAAGCGTGGCGCTaGGTTTGTCCCCTTCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: ITTCGLTQERAQGHWAGLREAWR*VCPLPS Trigger: AGAAGGAAGGGGACAAACGCAGCGCCACGCTTCACG...CAGCCCTGCCCAGTGTCCCTGTGCCCTCTCCTGGGTTAGTCCACATGTCGTGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060987.15 ENSMUST00000180036.8 |
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| CDS-3UTR CCA 90 bp | CACAATCACGACATGTGGACTAACCCAGGAGAGGGCACAGGGACACTGGGCAGGAGGCAGAGGTCCAGCTaGGAGCTCGATGTAGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: HNHDMWTNPGEGTGTLGRRQRSS*ELDVEA Trigger: GGCCTCTACATCGAGCTCCCAGCTGGACCTCTGCCT...CCTGCCCAGTGTCCCTGTGCCCTCTCCTGGGTTAGTCCACATGTCGTGATTGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060987.15 ENSMUST00000180036.8 |
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| CDS-3UTR TCA 90 bp | TGCACAATCACGACATGTGGACTAACCCAGGAGAGGGCACAGGGACACTGGGCAATCTTCAGGGGTGGGTaGGGGACATCGGAGCACCAC | + |
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Preference number: 4 (lower is better) Translates to: CTITTCGLTQERAQGHWAIFRGG*GTSEHH Trigger: GTGGTGCTCCGATGTCCCTCACCCACCCCTGAAGAT...TGCCCAGTGTCCCTGTGCCCTCTCCTGGGTTAGTCCACATGTCGTGATTGTGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000180036.8 |
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| CDS-3UTR GCA 90 bp | AAGCCAACACTTGAGTGTGACAAACACAGCATTCAGCTCGAAGAAGCACCCCGCGCCCTCCAGGTGACCTaGTTGGCCTCCGTGAGCGTG | + |
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Preference number: 4 (lower is better) Translates to: KPTLECDKHSIQLEEAPRALQVT*LASVSV Trigger: CACGCTCACGGAGGCCAAGCAGGTCACCTGGAGGGC...GCGGGGTGCTTCTTCGAGCTGAATGCTGTGTTTGTCACACTCAAGTGTTGGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060987.15 ENSMUST00000180036.8 |
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| CDS-3UTR TCA 90 bp | ACAGCATTCAGCTCGAAGAAGCACCCCGCTAATGGAGTGAGCGTTTATTCTGCACCGCCGCGGCTGTGCTaGCTAAGAAGCGGCATGGTG | + |
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Preference number: 4 (lower is better) Translates to: TAFSSKKHPANGVSVYSAPPRLC*LRSGMV Trigger: CACCATGCCGCTTCTTAGTCAGCACAGCCGCGGCGG...TGCAGAATAAACGCTCACTCCATTAGCGGGGTGCTTCTTCGAGCTGAATGCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060987.15 ENSMUST00000180036.8 |
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| CDS-3UTR TCA 90 bp | TGCACAATCACGACATGTGGACTAACCCAGGAGAGGGCACAGGGACACTGGGCATCTTGGGGAAGCAGATaGAAACGTGGTCAGCCTGGA | + |
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Preference number: 4 (lower is better) Translates to: CTITTCGLTQERAQGHWASWGSR*KRGQPG Trigger: TCCAGGCTGACCACGTTTTCATCTGCTTCCCCAAGA...TGCCCAGTGTCCCTGTGCCCTCTCCTGGGTTAGTCCACATGTCGTGATTGTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060987.15 ENSMUST00000179341.2 ENSMUST00000180036.8 |
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| CDS-3UTR TCA 90 bp | TTCTGCACAATCACGACATGTGGACTAACCCAGGAGAGGGCACAGGGACACTGGCAAAGCCAAGAAAGCTaGAGGTTCGGAGTAGGGCGG | + |
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Preference number: 4 (lower is better) Translates to: FCTITTCGLTQERAQGHWQSQES*RFGVGR Trigger: CCGCCCTACTCCGAACCTTCAGCTTTCTTGGCTTTG...CCAGTGTCCCTGTGCCCTCTCCTGGGTTAGTCCACATGTCGTGATTGTGCAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060987.15 ENSMUST00000180036.8 |
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| CDS-3UTR CCA 90 bp | ATTCTGCACAATCACGACATGTGGACTAACCCAGGAGAGGGCACAGGGACACTGTGGGATCTTCAGGGGTaGGTGAGGGACATCGCACCA | + |
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Preference number: 4 (lower is better) Translates to: ILHNHDMWTNPGEGTGTLWDLQG*VRDIAP Trigger: TGGTGCGATGTCCCTCACCCACCCCTGAAGATCCCA...CAGTGTCCCTGTGCCCTCTCCTGGGTTAGTCCACATGTCGTGATTGTGCAGAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060987.15 |
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| CDS-3UTR TCA 90 bp | GCGTTTATTCTGCACAATCACGACATGTGGACTAACCCAGGAGAGGGCACAGGGCAAAGCCAAGAAAGCTaGAGGTTCGGAGTAGGGCGG | + |
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Preference number: 4 (lower is better) Translates to: AFILHNHDMWTNPGEGTGQSQES*RFGVGR Trigger: CCGCCCTACTCCGAACCTTCAGCTTTCTTGGCTTTG...CCCTGTGCCCTCTCCTGGGTTAGTCCACATGTCGTGATTGTGCAGAATAAACGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060987.15 ENSMUST00000180036.8 |
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| CDS-3UTR GCA 90 bp | GCGTTTATTCTGCACAATCACGACATGTGGACTAACCCAGGAGAGGGCACAGGGTTGGGGACAAGGGGATaGCCGGGTCTCACAATCTCA | + |
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Preference number: 4 (lower is better) Translates to: AFILHNHDMWTNPGEGTGLGTRG*PGLTIS Trigger: TGAGATTGTGAGACCCGGGCATCCCCTTGTCCCCAA...CCCTGTGCCCTCTCCTGGGTTAGTCCACATGTCGTGATTGTGCAGAATAAACGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060987.15 ENSMUST00000180036.8 |
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| CDS-3UTR TCA 90 bp | ATTCTGCACAATCACGACATGTGGACTAACCCAGGAGAGGGCACAGGGACACTGGTACAGGATGCTAGCTaGAAGACTGTGATCCCGCTG | + |
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Preference number: 4 (lower is better) Translates to: ILHNHDMWTNPGEGTGTLVQDAS*KTVIPL Trigger: CAGCGGGATCACAGTCTTTCAGCTAGCATCCTGTAC...CAGTGTCCCTGTGCCCTCTCCTGGGTTAGTCCACATGTCGTGATTGTGCAGAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060987.15 ENSMUST00000180036.8 |
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| CDS-3UTR TCA 90 bp | AAGCCAACACTTGAGTGTGACAAACACAGCATTCAGCTCGAAGAAGCACCCCGCGTACAGGATGCTAGCTaGAAGACTGTGATCCCGCTG | + |
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Preference number: 4 (lower is better) Translates to: KPTLECDKHSIQLEEAPRVQDAS*KTVIPL Trigger: CAGCGGGATCACAGTCTTTCAGCTAGCATCCTGTAC...GCGGGGTGCTTCTTCGAGCTGAATGCTGTGTTTGTCACACTCAAGTGTTGGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060987.15 ENSMUST00000180036.8 |
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| CDS-3UTR GCA 90 bp | TTTATTGGATTTGAGCCAGGGGAGGTGACACTATTTTTCCAGACTTCAAAGGAGGCCCTCCAGGTGACCTaGTTGGCCTCCGTGAGCGTG | + |
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Preference number: 4 (lower is better) Translates to: FIGFEPGEVTLFFQTSKEALQVT*LASVSV Trigger: CACGCTCACGGAGGCCAAGCAGGTCACCTGGAGGGC...CTCCTTTGAAGTCTGGAAAAATAGTGTCACCTCCCCTGGCTCAAATCCAATAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060987.15 ENSMUST00000180036.8 |
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| CDS-3UTR TCA 90 bp | TTTGAGCCAGGGGAGGTGACACTATTTTTCCAGACTTCAAAGGAGACTGCTATAATCTTCAGGGGTGGGTaGGGGACATCGCACCACCGA | + |
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Preference number: 4 (lower is better) Translates to: FEPGEVTLFFQTSKETAIIFRGG*GTSHHR Trigger: TCGGTGGTGCGATGTCCCTCACCCACCCCTGAAGAT...TATAGCAGTCTCCTTTGAAGTCTGGAAAAATAGTGTCACCTCCCCTGGCTCAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000060987.15 |
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| CDS-3UTR CCA 90 bp | TTAAAGCCAACACTTGAGTGTGACAAACACAGCATTCAGCTCGAAGAAGCACCCTCTCTGGCGAAGCAGTaGCTGTTGAGGATCCGCTGC | + |
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Preference number: 4 (lower is better) Translates to: LKPTLECDKHSIQLEEAPSLAKQ*LLRIRC Trigger: GCAGCGGATCCTCAACAGCCACTGCTTCGCCAGAGA...GGGTGCTTCTTCGAGCTGAATGCTGTGTTTGTCACACTCAAGTGTTGGCTTTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060987.15 ENSMUST00000180036.8 |
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| CDS-3UTR CCA 90 bp | TTTGAGCCAGGGGAGGTGACACTATTTTTCCAGACTTCAAAGGAGACTGCTATATCCGTGAGCGTGGACTaGATGCTCAGGACCCTGGTC | + |
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Preference number: 4 (lower is better) Translates to: FEPGEVTLFFQTSKETAISVSVD*MLRTLV Trigger: GACCAGGGTCCTGAGCATCCAGTCCACGCTCACGGA...TATAGCAGTCTCCTTTGAAGTCTGGAAAAATAGTGTCACCTCCCCTGGCTCAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060987.15 ENSMUST00000180036.8 |
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| CDS-3UTR CCA 90 bp | TTTGAGCCAGGGGAGGTGACACTATTTTTCCAGACTTCAAAGGAGACTGCTATAAGGCAGAGGTCCAGCTaGGAGCTCGATGTAGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: FEPGEVTLFFQTSKETAIRQRSS*ELDVEA Trigger: GGCCTCTACATCGAGCTCCCAGCTGGACCTCTGCCT...TATAGCAGTCTCCTTTGAAGTCTGGAAAAATAGTGTCACCTCCCCTGGCTCAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060987.15 ENSMUST00000180036.8 |
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| CDS-3UTR TCA 90 bp | TTCAGCTCGAAGAAGCACCCCGCTAATGGAGTGAGCGTTTATTCTGCACAATCATCTTGGGGAAGCAGATaGAAACGTGGTCAGCCTGGA | + |
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Preference number: 4 (lower is better) Translates to: FSSKKHPANGVSVYSAQSSWGSR*KRGQPG Trigger: TCCAGGCTGACCACGTTTTCATCTGCTTCCCCAAGA...TGATTGTGCAGAATAAACGCTCACTCCATTAGCGGGGTGCTTCTTCGAGCTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060987.15 ENSMUST00000179341.2 ENSMUST00000180036.8 |
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| CDS-3UTR CCA 90 bp | ATTGGATTTGAGCCAGGGGAGGTGACACTATTTTTCCAGACTTCAAAGGAGACTTCTCTGGCGAAGCAGTaGCTGTTGAGGATCCGCTGC | + |
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Preference number: 4 (lower is better) Translates to: IGFEPGEVTLFFQTSKETSLAKQ*LLRIRC Trigger: GCAGCGGATCCTCAACAGCCACTGCTTCGCCAGAGA...AGTCTCCTTTGAAGTCTGGAAAAATAGTGTCACCTCCCCTGGCTCAAATCCAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060987.15 ENSMUST00000180036.8 |
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| CDS-3UTR CCA 90 bp | CACTTTATTGGATTTGAGCCAGGGGAGGTGACACTATTTTTCCAGACTTCAAAGTCCGTGAGCGTGGACTaGATGCTCAGGACCCTGGTC | + |
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Preference number: 4 (lower is better) Translates to: HFIGFEPGEVTLFFQTSKSVSVD*MLRTLV Trigger: GACCAGGGTCCTGAGCATCCAGTCCACGCTCACGGA...CTTTGAAGTCTGGAAAAATAGTGTCACCTCCCCTGGCTCAAATCCAATAAAGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060987.15 ENSMUST00000180036.8 |
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| CDS-3UTR GCA 90 bp | GAATTAAAGCCAACACTTGAGTGTGACAAACACAGCATTCAGCTCGAAGAAGCACGTGAAGCGTGGCGCTaGGTTTGTCCCCTTCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: ELKPTLECDKHSIQLEEAREAWR*VCPLPS Trigger: AGAAGGAAGGGGACAAACGCAGCGCCACGCTTCACG...TGCTTCTTCGAGCTGAATGCTGTGTTTGTCACACTCAAGTGTTGGCTTTAATTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060987.15 ENSMUST00000180036.8 |
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| CDS-3UTR GCA 90 bp | TTTGAGCCAGGGGAGGTGACACTATTTTTCCAGACTTCAAAGGAGACTGCTATATTGGGGACAAGGGGATaGCCGGGTCTCACAATCTCA | + |
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Preference number: 4 (lower is better) Translates to: FEPGEVTLFFQTSKETAILGTRG*PGLTIS Trigger: TGAGATTGTGAGACCCGGGCATCCCCTTGTCCCCAA...TATAGCAGTCTCCTTTGAAGTCTGGAAAAATAGTGTCACCTCCCCTGGCTCAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000060987.15 ENSMUST00000180036.8 |
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| CDS-3UTR CCA 90 bp | TTTATTGGATTTGAGCCAGGGGAGGTGACACTATTTTTCCAGACTTCAAAGGAGTGGGATCTTCAGGGGTaGGTGAGGGACATCGGAGCA | + |
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Preference number: 4 (lower is better) Translates to: FIGFEPGEVTLFFQTSKEWDLQG*VRDIGA Trigger: TGCTCCGATGTCCCTCACCCACCCCTGAAGATCCCA...CTCCTTTGAAGTCTGGAAAAATAGTGTCACCTCCCCTGGCTCAAATCCAATAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000180036.8 |
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| CDS-3UTR GCA 90 bp | CACTTTATTGGATTTGAGCCAGGGGAGGTGACACTATTTTTCCAGACTTCAAAGCAAAACTGTCCTTACTaGCCTCAGGCAGAGGTCCAG | + |
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Preference number: 4 (lower is better) Translates to: HFIGFEPGEVTLFFQTSKQNCPY*PQAEVQ Trigger: CTGGACCTCTGCCTGAGGGCAGTAAGGACAGTTTTG...CTTTGAAGTCTGGAAAAATAGTGTCACCTCCCCTGGCTCAAATCCAATAAAGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000060987.15 ENSMUST00000179341.2 ENSMUST00000180036.8 |
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| CDS CCA 90 bp | CACACCGCCCTCCAGGTGACCTGCTTGGCCTCCGTGAGCGTGGACTaGATGCTCAGGACCCTGGTCTTGTCGTTAGACGTCGGCTCCTCT | + |
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Preference number: 5 (lower is better) Translates to: HTALQVTCLASVSVD*MLRTLVLSLDVGSS Trigger: AGAGGAGCCGACGTCTAACGACAAGACCAGGGTCCTGAGCATCCAGTCCACGCTCACGGAGGCCAAGCAGGTCACCTGGAGGGCGGTGTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000060987.15 ENSMUST00000177850.8 ENSMUST00000179172.8 ENSMUST00000179620.8 ENSMUST00000180036.8 |
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| CDS CCA 90 bp | AACTCTAGGAGAGCTGTCCTTACTGCCCTCAGGCAGAGGTCCAGCTaGGAGCTCGATGTAGAGGCCACCACCACTCCACACCGCCCTCCA | + |
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Preference number: 5 (lower is better) Translates to: NSRRAVLTALRQRSS*ELDVEATTTPHRPP Trigger: TGGAGGGCGGTGTGGAGTGGTGGTGGCCTCTACATCGAGCTCCCAGCTGGACCTCTGCCTGAGGGCAGTAAGGACAGCTCTCCTAGAGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179172.8 |
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| CDS GCA 90 bp | GTTGCTCCTCTGCGAACTCTAGGAGAGCTGCAAAACTGTCCTTACTaGCCTCAGGCAGAGGTCCAGCTGGGAGCTCGATGTAGAGGCCAC | + |
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Preference number: 5 (lower is better) Translates to: VAPLRTLGELQNCPY*PQAEVQLGARCRGH Trigger: GTGGCCTCTACATCGAGCTCCCAGCTGGACCTCTGCCTGAGGGCAGTAAGGACAGTTTTGCAGCTCTCCTAGAGTTCGCAGAGGAGCAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060987.15 ENSMUST00000177850.8 ENSMUST00000179620.8 ENSMUST00000180036.8 |
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| CDS TCA 90 bp | TTCGGAGTAGGGCGGCTCTGTCCTCACGGTTCTTGGGGAAGCAGATaGAAACGTGGTCAGCCTGGAGTTGCTCCTCTGCGAACTCTAGGA | + |
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Preference number: 5 (lower is better) Translates to: FGVGRLCPHGSWGSR*KRGQPGVAPLRTLG Trigger: TCCTAGAGTTCGCAGAGGAGCAACTCCAGGCTGACCACGTTTTCATCTGCTTCCCCAAGAACCGTGAGGACAGAGCCGCCCTACTCCGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060987.15 ENSMUST00000177850.8 ENSMUST00000179620.8 ENSMUST00000180036.8 |
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| CDS-3UTR CAA 90 bp | GCGTTTATTCTGCACAATCACGACATGTGGACTAACCCAGGAGAGGGCACAGGGAGCGTGGCGCTGCGTTaGTCCCCTTCCTTCTCTCTG | + |
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Preference number: 5 (lower is better) Translates to: AFILHNHDMWTNPGEGTGSVALR*SPSFSL Trigger: CAGAGAGAAGGAAGGGGACAAACGCAGCGCCACGCT...CCCTGTGCCCTCTCCTGGGTTAGTCCACATGTCGTGATTGTGCAGAATAAACGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060987.15 ENSMUST00000180036.8 |
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| CDS-3UTR CAA 90 bp | TTTATTCTGCACAATCACGACATGTGGACTAACCCAGGAGAGGGCACAGGGACAAGCGTGGCGCTGCGTTaGTCCCCTTCCTTCTCTCTG | + |
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Preference number: 5 (lower is better) Translates to: FILHNHDMWTNPGEGTGTSVALR*SPSFSL Trigger: CAGAGAGAAGGAAGGGGACAAACGCAGCGCCACGCT...TGTCCCTGTGCCCTCTCCTGGGTTAGTCCACATGTCGTGATTGTGCAGAATAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060987.15 ENSMUST00000180036.8 |
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| CDS TCA 90 bp | TCAAAGCCAAGAAAGCTCTGTCCTCACGGTTCTTGGGGAAGCAGATaGAAACGTGGTCAGCCTGGAGTTGCTCCTCTGCGAACTCTAGGA | + |
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Preference number: 5 (lower is better) Translates to: SKPRKLCPHGSWGSR*KRGQPGVAPLRTLG Trigger: TCCTAGAGTTCGCAGAGGAGCAACTCCAGGCTGACCACGTTTTCATCTGCTTCCCCAAGAACCGTGAGGACAGAGCTTTCTTGGCTTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179341.2 |
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| CDS GCA 72 bp | AGGCCACCACCACTCCACACCGCCCTCCAGGTGACCTaGTTGGCCTCCGTGAGCGTGGACTGGATGCTCAGG | + |
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Preference number: 6 (lower is better) Translates to: RPPPLHTALQVT*LASVSVDWMLR Trigger: CCTGAGCATCCAGTCCACGCTCACGGAGGCCAAGCAGGTCACCTGGAGGGCGGTGTGGAGTGGTGGTGGCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000060987.15 ENSMUST00000177850.8 ENSMUST00000179172.8 ENSMUST00000179620.8 ENSMUST00000180036.8 |
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| CDS CAA 72 bp | CCACCACCACTCCACACCGCCCTCCAGGTGACCTGCTaGGCCTCCGTGAGCGTGGACTGGATGCTCAGGACC | + |
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Preference number: 6 (lower is better) Translates to: PPPLHTALQVTC*ASVSVDWMLRT Trigger: GGTCCTGAGCATCCAGTCCACGCTCACGGAGGCCAAGCAGGTCACCTGGAGGGCGGTGTGGAGTGGTGGTGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000060987.15 ENSMUST00000177850.8 ENSMUST00000179172.8 ENSMUST00000179620.8 ENSMUST00000180036.8 |
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| CDS CAA 90 bp | TGCTTGGCCTCCGTGAGCGTGGACTGGATGCTCAGGACCCTGGTCTaGTCGTTAGACGTCGGCTCCTCTGTCACATTCAGCCGCTCGTCG | + |
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Preference number: 6 (lower is better) Translates to: CLASVSVDWMLRTLV*SLDVGSSVTFSRSS Trigger: CGACGAGCGGCTGAATGTGACAGAGGAGCCGACGTCTAACGACAAGACCAGGGTCCTGAGCATCCAGTCCACGCTCACGGAGGCCAAGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000060987.15 ENSMUST00000177850.8 ENSMUST00000179172.8 ENSMUST00000179620.8 ENSMUST00000180036.8 |
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| CDS CCA 72 bp | CTCCAGGTGACCTGCTTGGCCTCCGTGAGCGTGGACTaGATGCTCAGGACCCTGGTCTTGTCGTTAGACGTC | + |
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Preference number: 6 (lower is better) Translates to: LQVTCLASVSVD*MLRTLVLSLDV Trigger: GACGTCTAACGACAAGACCAGGGTCCTGAGCATCCAGTCCACGCTCACGGAGGCCAAGCAGGTCACCTGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000060987.15 ENSMUST00000177850.8 ENSMUST00000179172.8 ENSMUST00000179620.8 ENSMUST00000180036.8 |
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| CDS GCA 72 bp | CTGCGAACTCTAGGAGAGCTGCAAAACTGTCCTTACTaGCCTCAGGCAGAGGTCCAGCTGGGAGCTCGATGT | + |
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Preference number: 6 (lower is better) Translates to: LRTLGELQNCPY*PQAEVQLGARC Trigger: ACATCGAGCTCCCAGCTGGACCTCTGCCTGAGGGCAGTAAGGACAGTTTTGCAGCTCTCCTAGAGTTCGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060987.15 ENSMUST00000177850.8 ENSMUST00000179620.8 ENSMUST00000180036.8 |
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| CDS CAA 72 bp | AAGGTTCGGAGTAGGGCGGCTCTGTCCTCACGGTTCTaGGGGAAGCAGATGAAAACGTGGTCAGCCTGGAGT | + |
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Preference number: 6 (lower is better) Translates to: KVRSRAALSSRF*GKQMKTWSAWS Trigger: ACTCCAGGCTGACCACGTTTTCATCTGCTTCCCCAAGAACCGTGAGGACAGAGCCGCCCTACTCCGAACCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000060987.15 ENSMUST00000177850.8 ENSMUST00000179620.8 ENSMUST00000180036.8 |
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| CDS CCA 72 bp | CTGTCCTCACGGTTCTTGGGGAAGCAGATGAAAACGTaGTCAGCCTGGAGTTGCTCCTCTGCGAACTCTAGG | + |
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Preference number: 6 (lower is better) Translates to: LSSRFLGKQMKT*SAWSCSSANSR Trigger: CCTAGAGTTCGCAGAGGAGCAACTCCAGGCTGACCACGTTTTCATCTGCTTCCCCAAGAACCGTGAGGACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000060987.15 ENSMUST00000177850.8 ENSMUST00000179341.2 ENSMUST00000179620.8 ENSMUST00000180036.8 |
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| CDS CAA 72 bp | AATCTCAAAGCCAAGAAAGCTCTGTCCTCACGGTTCTaGGGGAAGCAGATGAAAACGTGGTCAGCCTGGAGT | + |
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Preference number: 6 (lower is better) Translates to: NLKAKKALSSRF*GKQMKTWSAWS Trigger: ACTCCAGGCTGACCACGTTTTCATCTGCTTCCCCAAGAACCGTGAGGACAGAGCTTTCTTGGCTTTGAGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179341.2 |
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