RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OAT (Mus musculus)

Ensembl gene IDs: ENSMUSG00000030934

Ensembl transcript IDs: ENSMUST00000084500.8

Found 38 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCATCAACTGAAATATATGCCTTTCAGGAGACAGGCTCTGGCCACTaGAAGCAGAGTTTCACAAGAGCCCTGTCTGAAGATGGCTCCCCA +
Preference number: 1 (lower is better)
Translates to: ASTEIYAFQETGSGH*KQSFTRALSEDGSP
Trigger: TGGGGAGCCATCTTCAGACAGGGCTCTTGTGAAACTCTGCTTGCAGTGGCCAGAGCCTGTCTCCTGAAAGGCATATATTTCAGTTGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084500.8
3UTR TCA 90 bp ACAAACCATTCACATCAGCAAGGAAACTGTAAAGACGCACGTAAATaGCTGCAGGCCTCCATCTGCAGGCTGTACGCAGATGGGTCCGTT +
Preference number: 1 (lower is better)
Translates to: TNHSHQQGNCKDARK*LQASICRLYADGSV
Trigger: AACGGACCCATCTGCGTACAGCCTGCAGATGGAGGCCTGCAGTCATTTACGTGCGTCTTTACAGTTTCCTTGCTGATGTGAATGGTTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084500.8
3UTR-3UTR TCA 90 bp CATCTGCAGGCTGTACGCAGATGGGTCCGTTTCTCCTTAGAAAGTTCCCACACACACAAGAGCCCTGTCTaGAGATGGCTCCCCAGAGTT +
Preference number: 2 (lower is better)
Translates to: HLQAVRRWVRFSLESSHTHKSPV*RWLPRV
Trigger: AACTCTGGGGAGCCATCTTCAGACAGGGCTCTTGTG...TGTGTGGGAACTTTCTAAGGAGAAACGGACCCATCTGCGTACAGCCTGCAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084500.8
3UTR-3UTR GCA 90 bp CTTAGAAAGTTCCCACACAGTCAAACCTCAACAAAGAGACGCCTCGCCTCTCGCACAGGCTCTGGCCACTaGAAGCAGAGTTTCACAAGA +
Preference number: 2 (lower is better)
Translates to: LRKFPHSQTSTKRRLASRTGSGH*KQSFTR
Trigger: TCTTGTGAAACTCTGCTTGCAGTGGCCAGAGCCTGT...GCGAGAGGCGAGGCGTCTCTTTGTTGAGGTTTGACTGTGTGGGAACTTTCTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084500.8
3UTR-3UTR GCA 90 bp TTCTCCTTAGAAAGTTCCCACACAGTCAAACCTCAACAAAGAGACGCCTCGCCTTGTCACGCAGCCACCTaGAGGTTCCTAGGTGTCACT +
Preference number: 2 (lower is better)
Translates to: FSLESSHTVKPQQRDASPCHAAT*RFLGVT
Trigger: AGTGACACCTAGGAACCTGCAGGTGGCTGCGTGACA...AGGCGAGGCGTCTCTTTGTTGAGGTTTGACTGTGTGGGAACTTTCTAAGGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084500.8
3UTR CCA 72 bp ATGACTGCAGGCCTCCATCTGCAGGCTGTACGCAGATaGGTCCGTTTCTCCTTAGAAAGTTCCCACACAGTC +
Preference number: 3 (lower is better)
Translates to: MTAGLHLQAVRR*VRFSLESSHTV
Trigger: GACTGTGTGGGAACTTTCTAAGGAGAAACGGACCCATCTGCGTACAGCCTGCAGATGGAGGCCTGCAGTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084500.8
3UTR TCA 72 bp TCACATCAGCAAGGAAACTGTAAAGACGCACGTAAATaGCTGCAGGCCTCCATCTGCAGGCTGTACGCAGAT +
Preference number: 3 (lower is better)
Translates to: SHQQGNCKDARK*LQASICRLYAD
Trigger: ATCTGCGTACAGCCTGCAGATGGAGGCCTGCAGTCATTTACGTGCGTCTTTACAGTTTCCTTGCTGATGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084500.8
3UTR GCA 72 bp GAAATATATGCCTTTCAGGAGACAGGCTCTGGCCACTaGAAGCAGAGTTTCACAAGAGCCCTGTCTGAAGAT +
Preference number: 3 (lower is better)
Translates to: EIYAFQETGSGH*KQSFTRALSED
Trigger: ATCTTCAGACAGGGCTCTTGTGAAACTCTGCTTGCAGTGGCCAGAGCCTGTCTCCTGAAAGGCATATATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084500.8
CDS-3UTR GCA 90 bp TCTGCAGGCTGTACGCAGATGGGTCCGTTTCTCCTTAGAAAGTTCCCACACAGTGGACCTGGTGCCTGGTaGAGAGTTCCCGAACTCCTG +
Preference number: 4 (lower is better)
Translates to: SAGCTQMGPFLLRKFPHSGPGAW*RVPELL
Trigger: CAGGAGTTCGGGAACTCTGCACCAGGCACCAGGTCC...ACTGTGTGGGAACTTTCTAAGGAGAAACGGACCCATCTGCGTACAGCCTGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084500.8
CDS-3UTR CCA 90 bp CTTAGAAAGTTCCCACACAGTCAAACCTCAACAAAGAGACGCCTCGCCTCTCGCGGTTTCCGCCGTATGTaGAGCCGTGCTCGCCTGGTT +
Preference number: 4 (lower is better)
Translates to: LRKFPHSQTSTKRRLASRGFRRM*SRARLV
Trigger: AACCAGGCGAGCACGGCTCCACATACGGCGGAAACC...GCGAGAGGCGAGGCGTCTCTTTGTTGAGGTTTGACTGTGTGGGAACTTTCTAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084500.8
CDS-3UTR GCA 90 bp TCTGCAGGCTGTACGCAGATGGGTCCGTTTCTCCTTAGAAAGTTCCCACACAGTCGGAACGATAACGCCTaGTTCACCCTGGATGGGCTC +
Preference number: 4 (lower is better)
Translates to: SAGCTQMGPFLLRKFPHSRNDNA*FTLDGL
Trigger: GAGCCCATCCAGGGTGAAGCAGGCGTTATCGTTCCG...ACTGTGTGGGAACTTTCTAAGGAGAAACGGACCCATCTGCGTACAGCCTGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084500.8
CDS-3UTR TCA 90 bp CTTAGAAAGTTCCCACACAGTCAAACCTCAACAAAGAGACGCCTCGCCTCTCGCGGCAGTGTCCTTGGCTaGCAGCACCATAAGCACTCA +
Preference number: 4 (lower is better)
Translates to: LRKFPHSQTSTKRRLASRGSVLG*QHHKHS
Trigger: TGAGTGCTTATGGTGCTGTCAGCCAAGGACACTGCC...GCGAGAGGCGAGGCGTCTCTTTGTTGAGGTTTGACTGTGTGGGAACTTTCTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084500.8
CDS-3UTR TCA 90 bp CATCTGCAGGCTGTACGCAGATGGGTCCGTTTCTCCTTAGAAAGTTCCCACACAGCAACATTTGGATCCTaGAGAGCACGCTCCAGTGCG +
Preference number: 4 (lower is better)
Translates to: HLQAVRRWVRFSLESSHTATFGS*RARSSA
Trigger: CGCACTGGAGCGTGCTCTTCAGGATCCAAATGTTGC...TGTGTGGGAACTTTCTAAGGAGAAACGGACCCATCTGCGTACAGCCTGCAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084500.8
CDS-3UTR GCA 90 bp CTTAGAAAGTTCCCACACAGTCAAACCTCAACAAAGAGACGCCTCGCCTCTCGCACGAGCGAGCTTACATaGAGTCTCTCCAGCCTCCAC +
Preference number: 4 (lower is better)
Translates to: LRKFPHSQTSTKRRLASRTSELT*SLSSLH
Trigger: GTGGAGGCTGGAGAGACTGCATGTAAGCTCGCTCGT...GCGAGAGGCGAGGCGTCTCTTTGTTGAGGTTTGACTGTGTGGGAACTTTCTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084500.8
CDS-3UTR GCA 90 bp CTTAGAAAGTTCCCACACAGTCAAACCTCAACAAAGAGACGCCTCGCCTCTCGCATAAACAGGACCTGGTaGCTGGTGCAGAGTTCCCGA +
Preference number: 4 (lower is better)
Translates to: LRKFPHSQTSTKRRLASRINRTW*LVQSSR
Trigger: TCGGGAACTCTGCACCAGGCACCAGGTCCTGTTTAT...GCGAGAGGCGAGGCGTCTCTTTGTTGAGGTTTGACTGTGTGGGAACTTTCTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084500.8
CDS-3UTR CCA 90 bp CTTAGAAAGTTCCCACACAGTCAAACCTCAACAAAGAGACGCCTCGCCTCTCGCGTACTCGGAGGATGGTaGGCCTTGCTCTGTCTTCTT +
Preference number: 4 (lower is better)
Translates to: LRKFPHSQTSTKRRLASRVLGGW*ALLCLL
Trigger: AAGAAGACAGAGCAAGGCCCACCATCCTCCGAGTAC...GCGAGAGGCGAGGCGTCTCTTTGTTGAGGTTTGACTGTGTGGGAACTTTCTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084500.8
CDS-3UTR CCA 90 bp TTCTCCTTAGAAAGTTCCCACACAGTCAAACCTCAACAAAGAGACGCCTCGCCTACAGGACCTGGTGCCTaGTGCAGAGTTCCCGAACTC +
Preference number: 4 (lower is better)
Translates to: FSLESSHTVKPQQRDASPTGPGA*CRVPEL
Trigger: GAGTTCGGGAACTCTGCACCAGGCACCAGGTCCTGT...AGGCGAGGCGTCTCTTTGTTGAGGTTTGACTGTGTGGGAACTTTCTAAGGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084500.8
CDS-3UTR GCA 90 bp CTTAGAAAGTTCCCACACAGTCAAACCTCAACAAAGAGACGCCTCGCCTCTCGCAGGAAATCGAAGTACTaGCTGCCTTCCACATCCCAC +
Preference number: 4 (lower is better)
Translates to: LRKFPHSQTSTKRRLASRRKSKY*LPSTSH
Trigger: GTGGGATGTGGAAGGCAGGCAGTACTTCGATTTCCT...GCGAGAGGCGAGGCGTCTCTTTGTTGAGGTTTGACTGTGTGGGAACTTTCTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084500.8
CDS-3UTR GCA 90 bp TTCTCCTTAGAAAGTTCCCACACAGTCAAACCTCAACAAAGAGACGCCTCGCCTGAGGATGGTGGGCCTTaGTCTGTCTTCTTTGTGGCA +
Preference number: 4 (lower is better)
Translates to: FSLESSHTVKPQQRDASPEDGGP*SVFFVA
Trigger: TGCCACAAAGAAGACAGAGCAAGGCCCACCATCCTC...AGGCGAGGCGTCTCTTTGTTGAGGTTTGACTGTGTGGGAACTTTCTAAGGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084500.8
CDS-3UTR GCA 90 bp CTTAGAAAGTTCCCACACAGTCAAACCTCAACAAAGAGACGCCTCGCCTCTCGCAGCGCCCATCTTGTCTaGATTCTCAGCAAGATTCTC +
Preference number: 4 (lower is better)
Translates to: LRKFPHSQTSTKRRLASRSAHLV*ILSKIL
Trigger: GAGAATCTTGCTGAGAATGCAGACAAGATGGGCGCT...GCGAGAGGCGAGGCGTCTCTTTGTTGAGGTTTGACTGTGTGGGAACTTTCTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084500.8
CDS-3UTR CCA 90 bp CTTAGAAAGTTCCCACACAGTCAAACCTCAACAAAGAGACGCCTCGCCTCTCGCTCGGATCTGTGGAACTaGAGATTGCAGATAGTGTTC +
Preference number: 4 (lower is better)
Translates to: LRKFPHSQTSTKRRLASRSDLWN*RLQIVF
Trigger: GAACACTATCTGCAATCTCCAGTTCCACAGATCCGA...GCGAGAGGCGAGGCGTCTCTTTGTTGAGGTTTGACTGTGTGGGAACTTTCTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084500.8
CDS-3UTR CCA 90 bp TTCTCCTTAGAAAGTTCCCACACAGTCAAACCTCAACAAAGAGACGCCTCGCCTGATGGTTTCAAAGCCTaGCATGAAGGGTCCAAAGCC +
Preference number: 4 (lower is better)
Translates to: FSLESSHTVKPQQRDASPDGFKA*HEGSKA
Trigger: GGCTTTGGACCCTTCATGCCAGGCTTTGAAACCATC...AGGCGAGGCGTCTCTTTGTTGAGGTTTGACTGTGTGGGAACTTTCTAAGGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084500.8
CDS-3UTR TCA 90 bp TGTCACTCTATTATGCATCAACTGAAATATATGCCTTTCAGGAGACAGGCTCTGTTTCAAAGCCTGGCATaGAGGGTCCAAAGCCATCAT +
Preference number: 4 (lower is better)
Translates to: CHSIMHQLKYMPFRRQALFQSLA*RVQSHH
Trigger: ATGATGGCTTTGGACCCTTCATGCCAGGCTTTGAAA...CAGAGCCTGTCTCCTGAAAGGCATATATTTCAGTTGATGCATAATAGAGTGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084500.8
CDS-3UTR CCA 90 bp TGTCACTCTATTATGCATCAACTGAAATATATGCCTTTCAGGAGACAGGCTCTGGGGCAGATCGTTATATaGGATGGTTTCAAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: CHSIMHQLKYMPFRRQALGQIVI*DGFKAW
Trigger: CCAGGCTTTGAAACCATCCCATATAACGATCTGCCC...CAGAGCCTGTCTCCTGAAAGGCATATATTTCAGTTGATGCATAATAGAGTGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084500.8
CDS CCA 90 bp CAAAAATGTACTCGGAGGATGGTGGGCCTTGCTCTGTCTTCTTTGTaGCAACAGACGTGGCAGAGGCGACTGAGGTGTGGACTCCTCGGC +
Preference number: 5 (lower is better)
Translates to: QKCTRRMVGLALSSL*QQTWQRRLRCGLLG
Trigger: GCCGAGGAGTCCACACCTCAGTCGCCTCTGCCACGTCTGTTGCCACAAAGAAGACAGAGCAAGGCCCACCATCCTCCGAGTACATTTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084500.8
CDS GCA 90 bp TTCCCGAACTCCTGTCAGGTATCCTGGATCCGGAACGATAACGCCTaGTTCACCCTGGATGGGCTCCACCATGAAGGCAGCAACATTTGG +
Preference number: 5 (lower is better)
Translates to: FPNSCQVSWIRNDNA*FTLDGLHHEGSNIW
Trigger: CCAAATGTTGCTGCCTTCATGGTGGAGCCCATCCAGGGTGAAGCAGGCGTTATCGTTCCGGATCCAGGATACCTGACAGGAGTTCGGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084500.8
CDS-3UTR CAA 90 bp TTCTCCTTAGAAAGTTCCCACACAGTCAAACCTCAACAAAGAGACGCCTCGCCTTCACCGTGGGTTGGCTaGGCCAGAAGCCCGTTATCT +
Preference number: 5 (lower is better)
Translates to: FSLESSHTVKPQQRDASPSPWVG*ARSPLS
Trigger: AGATAACGGGCTTCTGGCCAAGCCAACCCACGGTGA...AGGCGAGGCGTCTCTTTGTTGAGGTTTGACTGTGTGGGAACTTTCTAAGGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084500.8
CDS-3UTR CAA 90 bp TCTGCAGGCTGTACGCAGATGGGTCCGTTTCTCCTTAGAAAGTTCCCACACAGTAGGATAGCGCCCATCTaGTCTGCATTCTCAGCAAGA +
Preference number: 5 (lower is better)
Translates to: SAGCTQMGPFLLRKFPHSRIAPI*SAFSAR
Trigger: TCTTGCTGAGAATGCAGACAAGATGGGCGCTATCCT...ACTGTGTGGGAACTTTCTAAGGAGAAACGGACCCATCTGCGTACAGCCTGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084500.8
CDS-3UTR CAA 90 bp TGTCACTCTATTATGCATCAACTGAAATATATGCCTTTCAGGAGACAGGCTCTGCTTGCTCTGTCTTCTTaGTGGCAACAGACGTGGCAG +
Preference number: 5 (lower is better)
Translates to: CHSIMHQLKYMPFRRQALLALSS*WQQTWQ
Trigger: CTGCCACGTCTGTTGCCACAAAGAAGACAGAGCAAG...CAGAGCCTGTCTCCTGAAAGGCATATATTTCAGTTGATGCATAATAGAGTGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084500.8
CDS GCA 72 bp TCCTGTCAGGTATCCTGGATCCGGAACGATAACGCCTaGTTCACCCTGGATGGGCTCCACCATGAAGGCAGC +
Preference number: 6 (lower is better)
Translates to: SCQVSWIRNDNA*FTLDGLHHEGS
Trigger: GCTGCCTTCATGGTGGAGCCCATCCAGGGTGAAGCAGGCGTTATCGTTCCGGATCCAGGATACCTGACAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084500.8
CDS CCA 72 bp ACTCGGAGGATGGTGGGCCTTGCTCTGTCTTCTTTGTaGCAACAGACGTGGCAGAGGCGACTGAGGTGTGGA +
Preference number: 6 (lower is better)
Translates to: TRRMVGLALSSL*QQTWQRRLRCG
Trigger: TCCACACCTCAGTCGCCTCTGCCACGTCTGTTGCCACAAAGAAGACAGAGCAAGGCCCACCATCCTCCGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084500.8
CDS TCA 72 bp ATGGGCTCCACCATGAAGGCAGCAACATTTGGATCCTaGAGAGCACGCTCCAGTGCGGGCAGATCGTTATAT +
Preference number: 6 (lower is better)
Translates to: MGSTMKAATFGS*RARSSAGRSLY
Trigger: ATATAACGATCTGCCCGCACTGGAGCGTGCTCTTCAGGATCCAAATGTTGCTGCCTTCATGGTGGAGCCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084500.8
CDS CCA 72 bp CTGAAGAGCACGCTCCAGTGCGGGCAGATCGTTATATaGGATGGTTTCAAAGCCTGGCATGAAGGGTCCAAA +
Preference number: 6 (lower is better)
Translates to: LKSTLQCGQIVI*DGFKAWHEGSK
Trigger: TTTGGACCCTTCATGCCAGGCTTTGAAACCATCCCATATAACGATCTGCCCGCACTGGAGCGTGCTCTTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084500.8
CDS CCA 72 bp CTTGTCCACCTGACTCTTCATGGCATCTATGATCTTTaGGTGGCAGTGTCCTTGGCTGACAGCACCATAAGC +
Preference number: 6 (lower is better)
Translates to: LVHLTLHGIYDL*VAVSLADSTIS
Trigger: GCTTATGGTGCTGTCAGCCAAGGACACTGCCACCCAAAGATCATAGATGCCATGAAGAGTCAGGTGGACAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084500.8
CDS CAA 90 bp CACCTGACTCTTCATGGCATCTATGATCTTTGGGTGGCAGTGTCCTaGGCTGACAGCACCATAAGCACTCAGGAAATCGAAGTACTGCCT +
Preference number: 6 (lower is better)
Translates to: HLTLHGIYDLWVAVS*ADSTISTQEIEVLP
Trigger: AGGCAGTACTTCGATTTCCTGAGTGCTTATGGTGCTGTCAGCCAAGGACACTGCCACCCAAAGATCATAGATGCCATGAAGAGTCAGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084500.8
CDS TCA 72 bp GCAGATCGTTATATGGGATGGTTTCAAAGCCTGGCATaGAGGGTCCAAAGCCATCATAACTGGTCGGATCTG +
Preference number: 6 (lower is better)
Translates to: ADRYMGWFQSLA*RVQSHHNWSDL
Trigger: CAGATCCGACCAGTTATGATGGCTTTGGACCCTTCATGCCAGGCTTTGAAACCATCCCATATAACGATCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084500.8
CDS CAA 72 bp CTTCATGGCATCTATGATCTTTGGGTGGCAGTGTCCTaGGCTGACAGCACCATAAGCACTCAGGAAATCGAA +
Preference number: 6 (lower is better)
Translates to: LHGIYDLWVAVS*ADSTISTQEIE
Trigger: TTCGATTTCCTGAGTGCTTATGGTGCTGTCAGCCAAGGACACTGCCACCCAAAGATCATAGATGCCATGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084500.8
CDS GCA 72 bp CAGCACCATAAGCACTCAGGAAATCGAAGTACTGCCTaGCTTCCACATCCCACATATAAATGCCTTTTCCTC +
Preference number: 6 (lower is better)
Translates to: QHHKHSGNRSTA*LPHPTYKCLFL
Trigger: GAGGAAAAGGCATTTATATGTGGGATGTGGAAGGCAGGCAGTACTTCGATTTCCTGAGTGCTTATGGTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084500.8