Pregenerated sensors for OASL2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029561Ensembl transcript IDs: ENSMUST00000031542.13, ENSMUST00000124716.3, ENSMUST00000144064.5, ENSMUST00000146072.8, ENSMUST00000150361.2
Found 101 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCCTCGCTCGCTGTACATTCCAGCGCTCGCTGGGGCCTACAGTCGTaGAACAGACCTGCAGCAGGCAGAAAGCAGCTTCTGCAGCCACCT | + |
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Preference number: 1 (lower is better) Translates to: PSLAVHSSARWGLQS*NRPAAGRKQLLQPP Trigger: AGGTGGCTGCAGAAGCTGCTTTCTGCCTGCTGCAGGTCTGTTGCACGACTGTAGGCCCCAGCGAGCGCTGGAATGTACAGCGAGCGAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144064.5 |
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| 3UTR GCA 90 bp | TGTACATTCCAGCGCTCGCTGGGGCCTACAGTCGTGCAACAGACCTaGAGCAGGCAGAAAGCAGCTTCTGCAGCCACCTGTTCCCATCCC | + |
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Preference number: 1 (lower is better) Translates to: CTFQRSLGPTVVQQT*SRQKAASAATCSHP Trigger: GGGATGGGAACAGGTGGCTGCAGAAGCTGCTTTCTGCCTGCTGCAGGTCTGTTGCACGACTGTAGGCCCCAGCGAGCGCTGGAATGTACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144064.5 |
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| 3UTR CCA 90 bp | CTCTCACCTGAACATCCCTCGCTCGCTGTACATTCCAGCGCTCGCTaGGGCCTACAGTCGTGCAACAGACCTGCAGCAGGCAGAAAGCAG | + |
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Preference number: 1 (lower is better) Translates to: LSPEHPSLAVHSSAR*GLQSCNRPAAGRKQ Trigger: CTGCTTTCTGCCTGCTGCAGGTCTGTTGCACGACTGTAGGCCCCAGCGAGCGCTGGAATGTACAGCGAGCGAGGGATGTTCAGGTGAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144064.5 |
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| 3UTR GCA 90 bp | GCCTACAGTCGTGCAACAGACCTGCAGCAGGCAGAAAGCAGCTTCTaGAGCCACCTGTTCCCATCCCTTTCTTCTTCCCAGGTTGTTGGT | + |
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Preference number: 1 (lower is better) Translates to: AYSRATDLQQAESSF*SHLFPSLSSSQVVG Trigger: ACCAACAACCTGGGAAGAAGAAAGGGATGGGAACAGGTGGCTGCAGAAGCTGCTTTCTGCCTGCTGCAGGTCTGTTGCACGACTGTAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144064.5 |
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| 3UTR TCA 90 bp | ACCCATCTCCCAGGCGTAGATGGTCAGCAGCTCCAGAGCATATTTTaGGGGCAACACTGCACCTCTTCCATATTTACGTCTCAGGCACTG | + |
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Preference number: 1 (lower is better) Translates to: THLPGVDGQQLQSIF*GQHCTSSIFTSQAL Trigger: CAGTGCCTGAGACGTAAATATGGAAGAGGTGCAGTGTTGCCCTCAAAATATGCTCTGGAGCTGCTGACCATCTACGCCTGGGAGATGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144064.5 |
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| 3UTR TCA 90 bp | AGGCTCTCATCATCTTCCAACTCCTCATCATCCAACAGTAGTACCTaGTCCTCCGCACAAGGGCCTCCAGCATCTTCTATCTTCTCTTTC | + |
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Preference number: 1 (lower is better) Translates to: RLSSSSNSSSSNSST*SSAQGPPASSIFSF Trigger: GAAAGAGAAGATAGAAGATGCTGGAGGCCCTTGTGCGGAGGATCAGGTACTACTGTTGGATGATGAGGAGTTGGAAGATGATGAGAGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144064.5 |
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| 3UTR TCA 90 bp | CTATCTTCTCTTTCAGATCTAAGATGGTATCATCAGGGTCGATGGTaGAAGGCTTGCTCTGGCCACCAGGATACTTCACAAAGACCAGGA | + |
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Preference number: 1 (lower is better) Translates to: LSSLSDLRWYHQGRW*KACSGHQDTSQRPG Trigger: TCCTGGTCTTTGTGAAGTATCCTGGTGGCCAGAGCAAGCCTTTCACCATCGACCCTGATGATACCATCTTAGATCTGAAAGAGAAGATAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144064.5 |
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| 3UTR-3UTR GCA 90 bp | GGTATCATCAGGGTCGATGGTGAAAGGCTTGCTCTGGCCACCAGGATACTTCACGCAGAAAGCAGCTTCTaGAGCCACCTGTTCCCATCC | + |
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Preference number: 2 (lower is better) Translates to: GIIRVDGERLALATRILHAESSF*SHLFPS Trigger: GGATGGGAACAGGTGGCTGCAGAAGCTGCTTTCTGC...GTGAAGTATCCTGGTGGCCAGAGCAAGCCTTTCACCATCGACCCTGATGATACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144064.5 |
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| 3UTR-3UTR CCA 90 bp | ATGGATGAAGGGAGAGGGCGGGAACACAAGATGATTTGGCCTGCTGCATGGGCCGGGAATCTGACAGTCTaGGGTCTGCTCTTTGAGATT | + |
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Preference number: 2 (lower is better) Translates to: MDEGRGREHKMIWPAAWAGNLTV*GLLFEI Trigger: AATCTCAAAGAGCAGACCCCAGACTGTCAGATTCCC...GGCCCATGCAGCAGGCCAAATCATCTTGTGTTCCCGCCCTCTCCCTTCATCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031542.13 ENSMUST00000144064.5 |
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| 3UTR-3UTR TCA 90 bp | GTATCATCAGGGTCGATGGTGAAAGGCTTGCTCTGGCCACCAGGATACTTCACAACTCAGCTCTCAGTGTaGCTCAAGGTGTCACTCTGC | + |
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Preference number: 2 (lower is better) Translates to: VSSGSMVKGLLWPPGYFTTQLSV*LKVSLC Trigger: GCAGAGTGACACCTTGAGTCACACTGAGAGCTGAGT...TGTGAAGTATCCTGGTGGCCAGAGCAAGCCTTTCACCATCGACCCTGATGATAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144064.5 |
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| 3UTR CAA 90 bp | TACCCATCTCCCAGGCGTAGATGGTCAGCAGCTCCAGAGCATATTTaGAGGGCAACACTGCACCTCTTCCATATTTACGTCTCAGGCACT | + |
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Preference number: 2 (lower is better) Translates to: YPSPRRRWSAAPEHI*RATLHLFHIYVSGT Trigger: AGTGCCTGAGACGTAAATATGGAAGAGGTGCAGTGTTGCCCTCAAAATATGCTCTGGAGCTGCTGACCATCTACGCCTGGGAGATGGGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144064.5 |
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| 3UTR-3UTR CCA 90 bp | GTCTGGCTTGGGTTAGTTTTCCATTCTAAGAGGTTTCTGGAGAGGTGGGGAATCTCTCCCAGGCGTAGATaGTCAGCAGCTCCAGAGCAT | + |
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Preference number: 2 (lower is better) Translates to: VWLGLVFHSKRFLERWGISPRRR*SAAPEH Trigger: ATGCTCTGGAGCTGCTGACCATCTACGCCTGGGAGA...GATTCCCCACCTCTCCAGAAACCTCTTAGAATGGAAAACTAACCCAAGCCAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144064.5 |
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| 3UTR-3UTR TCA 90 bp | ATGTTTGAGGAAAAGAGACACAGGTGTGACTCAGCTCTCAGTGTGACTCAAGGTCTCTGTGAAGCTTGGTaGGAAGTCACCAGGGTAGCC | + |
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Preference number: 2 (lower is better) Translates to: MFEEKRHRCDSALSVTQGLCEAW*EVTRVA Trigger: GGCTACCCTGGTGACTTCTCACCAAGCTTCACAGAG...ACCTTGAGTCACACTGAGAGCTGAGTCACACCTGTGTCTCTTTTCCTCAAACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144064.5 |
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| 3UTR-3UTR GCA 90 bp | AGGGCGGGAACACAAGATGATTTGGCCTGCTGCATGGGCCAGATAGTAGTTGTTCAAGATGATTTGGCCTaGTGCATGGGCCAGATAGTA | + |
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Preference number: 2 (lower is better) Translates to: RAGTQDDLACCMGQIVVVQDDLA*CMGQIV Trigger: TACTATCTGGCCCATGCAGCAGGCCAAATCATCTTG...AACAACTACTATCTGGCCCATGCAGCAGGCCAAATCATCTTGTGTTCCCGCCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031542.13 ENSMUST00000144064.5 |
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| 3UTR-3UTR TCA 90 bp | GGTATCATCAGGGTCGATGGTGAAAGGCTTGCTCTGGCCACCAGGATACTTCACAAATTCTCTAAGTGCTaGGATAAAGGCATGCACCAC | + |
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Preference number: 2 (lower is better) Translates to: GIIRVDGERLALATRILHKFSKC*DKGMHH Trigger: GTGGTGCATGCCTTTATCTCAGCACTTAGAGAATTT...GTGAAGTATCCTGGTGGCCAGAGCAAGCCTTTCACCATCGACCCTGATGATACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144064.5 |
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| 3UTR-3UTR TCA 90 bp | AAGAGACACAGGTGTGACTCAGCTCTCAGTGTGACTCAAGGTGTCACTCTGCATAGACCAGGCTGGCCTTaGACTCAGAAATTCTCTAAG | + |
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Preference number: 2 (lower is better) Translates to: KRHRCDSALSVTQGVTLHRPGWP*TQKFSK Trigger: CTTAGAGAATTTCTGAGTTCAAGGCCAGCCTGGTCT...ATGCAGAGTGACACCTTGAGTCACACTGAGAGCTGAGTCACACCTGTGTCTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031542.13 ENSMUST00000144064.5 |
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| 3UTR-3UTR TCA 90 bp | GCGGGAACACAAGATGATTTGGCCTGCTGCATGGGCCAGATAGTAGTTGTTTTCAGACCAGGCTGGCCTTaGACTCAGAAATTCTCTAAG | + |
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Preference number: 2 (lower is better) Translates to: AGTQDDLACCMGQIVVVFRPGWP*TQKFSK Trigger: CTTAGAGAATTTCTGAGTTCAAGGCCAGCCTGGTCT...GAAAACAACTACTATCTGGCCCATGCAGCAGGCCAAATCATCTTGTGTTCCCGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031542.13 ENSMUST00000144064.5 |
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| 3UTR-3UTR TCA 90 bp | AGGGCGGGAACACAAGATGATTTGGCCTGCTGCATGGGCCAGATAGTAGTTGTTGCATTCAGTATGAGTTaGGTGTTTAGAGTTGGGGGT | + |
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Preference number: 2 (lower is better) Translates to: RAGTQDDLACCMGQIVVVAFSMS*VFRVGG Trigger: ACCCCCAACTCTAAACACTCAACTCATACTGAATGC...AACAACTACTATCTGGCCCATGCAGCAGGCCAAATCATCTTGTGTTCCCGCCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031542.13 ENSMUST00000144064.5 |
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| 3UTR-3UTR TCA 90 bp | AAACAGAGGCTGAGGGAAAGGATGTTTGAGGAAAAGAGACACAGGTGTGACTCACTGGGGTCTGCTCTTTaGGATTCGGTGACTCACAGA | + |
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Preference number: 2 (lower is better) Translates to: KQRLRERMFEEKRHRCDSLGSAL*DSVTHR Trigger: TCTGTGAGTCACCGAATCTCAAAGAGCAGACCCCAG...TGAGTCACACCTGTGTCTCTTTTCCTCAAACATCCTTTCCCTCAGCCTCTGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031542.13 ENSMUST00000144064.5 |
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| 3UTR-3UTR TCA 90 bp | AGGGCGGGAACACAAGATGATTTGGCCTGCTGCATGGGCCAGATAGTAGTTGTTCAGGAGCATGCAGAATaGTGTGAAAGGCTTGTTAAG | + |
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Preference number: 2 (lower is better) Translates to: RAGTQDDLACCMGQIVVVQEHAE*CERLVK Trigger: CTTAACAAGCCTTTCACATCATTCTGCATGCTCCTG...AACAACTACTATCTGGCCCATGCAGCAGGCCAAATCATCTTGTGTTCCCGCCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031542.13 ENSMUST00000144064.5 |
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| 3UTR-3UTR GCA 90 bp | GTATCATCAGGGTCGATGGTGAAAGGCTTGCTCTGGCCACCAGGATACTTCACAACTTGGTCCAGTAGATaGAGATGTCGCGGTAGTTTA | + |
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Preference number: 2 (lower is better) Translates to: VSSGSMVKGLLWPPGYFTTWSSR*RCRGSL Trigger: TAAACTACCGCGACATCTGCATCTACTGGACCAAGT...TGTGAAGTATCCTGGTGGCCAGAGCAAGCCTTTCACCATCGACCCTGATGATAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144064.5 |
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| 3UTR CAA 90 bp | TCTTTCAGATCTAAGATGGTATCATCAGGGTCGATGGTGAAAGGCTaGCTCTGGCCACCAGGATACTTCACAAAGACCAGGATCTCAGGA | + |
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Preference number: 2 (lower is better) Translates to: SFRSKMVSSGSMVKG*LWPPGYFTKTRISG Trigger: TCCTGAGATCCTGGTCTTTGTGAAGTATCCTGGTGGCCAGAGCAAGCCTTTCACCATCGACCCTGATGATACCATCTTAGATCTGAAAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144064.5 |
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| 3UTR-3UTR TCA 90 bp | GCGGGAACACAAGATGATTTGGCCTGCTGCATGGGCCAGATAGTAGTTGTTTTCGCATTCAGTATGAGTTaGGTGTTTAGAGTTGGGGGT | + |
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Preference number: 2 (lower is better) Translates to: AGTQDDLACCMGQIVVVFAFSMS*VFRVGG Trigger: ACCCCCAACTCTAAACACTCAACTCATACTGAATGC...GAAAACAACTACTATCTGGCCCATGCAGCAGGCCAAATCATCTTGTGTTCCCGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031542.13 ENSMUST00000144064.5 |
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| 3UTR-3UTR TCA 90 bp | AAACAGAGGCTGAGGGAAAGGATGTTTGAGGAAAAGAGACACAGGTGTGACTCAAAAGAGACACAGGTGTaGCTCAGCTCTCAGTGTGAC | + |
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Preference number: 2 (lower is better) Translates to: KQRLRERMFEEKRHRCDSKETQV*LSSQCD Trigger: GTCACACTGAGAGCTGAGTCACACCTGTGTCTCTTT...TGAGTCACACCTGTGTCTCTTTTCCTCAAACATCCTTTCCCTCAGCCTCTGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031542.13 ENSMUST00000144064.5 |
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| 3UTR-3UTR TCA 90 bp | GTCTGGCTTGGGTTAGTTTTCCATTCTAAGAGGTTTCTGGAGAGGTGGGGAATCGATGAAAACAGAGGCTaGGGGAAAGGATGTTTGAGG | + |
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Preference number: 2 (lower is better) Translates to: VWLGLVFHSKRFLERWGIDENRG*GKGCLR Trigger: CCTCAAACATCCTTTCCCTCAGCCTCTGTTTTCATC...GATTCCCCACCTCTCCAGAAACCTCTTAGAATGGAAAACTAACCCAAGCCAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000031542.13 ENSMUST00000144064.5 |
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| 3UTR-3UTR GCA 90 bp | ATGTTTGAGGAAAAGAGACACAGGTGTGACTCAGCTCTCAGTGTGACTCAAGGTTTACGTCTCAGGCACTaGAGGTACCAGAACTTCACC | + |
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Preference number: 2 (lower is better) Translates to: MFEEKRHRCDSALSVTQGLRLRH*RYQNFT Trigger: GGTGAAGTTCTGGTACCTGCAGTGCCTGAGACGTAA...ACCTTGAGTCACACTGAGAGCTGAGTCACACCTGTGTCTCTTTTCCTCAAACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144064.5 |
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| 3UTR-3UTR CCA 90 bp | GTCTGGCTTGGGTTAGTTTTCCATTCTAAGAGGTTTCTGGAGAGGTGGGGAATCGGGAATCTGACAGTCTaGGGTCTGCTCTTTGAGATT | + |
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Preference number: 2 (lower is better) Translates to: VWLGLVFHSKRFLERWGIGNLTV*GLLFEI Trigger: AATCTCAAAGAGCAGACCCCAGACTGTCAGATTCCC...GATTCCCCACCTCTCCAGAAACCTCTTAGAATGGAAAACTAACCCAAGCCAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031542.13 ENSMUST00000144064.5 |
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| 3UTR-3UTR TCA 90 bp | ATTCTAAGAGGTTTCTGGAGAGGTGGGGAATCTGACAGTCTGGGGTCTGCTCTTGTTTGTTTGTTTATCTaGGACAGGGTTTCTCCGTAT | + |
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Preference number: 2 (lower is better) Translates to: ILRGFWRGGESDSLGSALVCLFI*DRVSPY Trigger: ATACGGAGAAACCCTGTCTCAGATAAACAAACAAAC...AAGAGCAGACCCCAGACTGTCAGATTCCCCACCTCTCCAGAAACCTCTTAGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031542.13 ENSMUST00000144064.5 |
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| 3UTR-3UTR TCA 90 bp | AAACAGAGGCTGAGGGAAAGGATGTTTGAGGAAAAGAGACACAGGTGTGACTCACAGGAGCATGCAGAATaGTGTGAAAGGCTTGTTAAG | + |
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Preference number: 2 (lower is better) Translates to: KQRLRERMFEEKRHRCDSQEHAE*CERLVK Trigger: CTTAACAAGCCTTTCACATCATTCTGCATGCTCCTG...TGAGTCACACCTGTGTCTCTTTTCCTCAAACATCCTTTCCCTCAGCCTCTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031542.13 ENSMUST00000144064.5 |
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| 3UTR-3UTR TCA 90 bp | GTCTGGCTTGGGTTAGTTTTCCATTCTAAGAGGTTTCTGGAGAGGTGGGGAATCGCACTTGTCATACATTaGTACTGGATTGGTACCATT | + |
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Preference number: 2 (lower is better) Translates to: VWLGLVFHSKRFLERWGIALVIH*YWIGTI Trigger: AATGGTACCAATCCAGTATCAATGTATGACAAGTGC...GATTCCCCACCTCTCCAGAAACCTCTTAGAATGGAAAACTAACCCAAGCCAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031542.13 ENSMUST00000144064.5 |
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| 3UTR-3UTR TCA 90 bp | ATGTTTGAGGAAAAGAGACACAGGTGTGACTCAGCTCTCAGTGTGACTCAAGGTGTTTGTTTGTTTATCTaGGACAGGGTTTCTCCGTAT | + |
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Preference number: 2 (lower is better) Translates to: MFEEKRHRCDSALSVTQGVCLFI*DRVSPY Trigger: ATACGGAGAAACCCTGTCTCAGATAAACAAACAAAC...ACCTTGAGTCACACTGAGAGCTGAGTCACACCTGTGTCTCTTTTCCTCAAACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031542.13 ENSMUST00000144064.5 |
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| 3UTR-3UTR CCA 90 bp | GCGGGAACACAAGATGATTTGGCCTGCTGCATGGGCCAGATAGTAGTTGTTTTCTTCATTCTGTATTATTaGAAAACACAGGAGAGGGTT | + |
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Preference number: 2 (lower is better) Translates to: AGTQDDLACCMGQIVVVFFILYY*KTQERV Trigger: AACCCTCTCCTGTGTTTTCCAATAATACAGAATGAA...GAAAACAACTACTATCTGGCCCATGCAGCAGGCCAAATCATCTTGTGTTCCCGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031542.13 ENSMUST00000144064.5 |
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| 3UTR GCA 72 bp | CAGCGCTCGCTGGGGCCTACAGTCGTGCAACAGACCTaGAGCAGGCAGAAAGCAGCTTCTGCAGCCACCTGT | + |
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Preference number: 3 (lower is better) Translates to: QRSLGPTVVQQT*SRQKAASAATC Trigger: ACAGGTGGCTGCAGAAGCTGCTTTCTGCCTGCTGCAGGTCTGTTGCACGACTGTAGGCCCCAGCGAGCGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144064.5 |
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| 3UTR GCA 72 bp | GCTGTACATTCCAGCGCTCGCTGGGGCCTACAGTCGTaGAACAGACCTGCAGCAGGCAGAAAGCAGCTTCTG | + |
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Preference number: 3 (lower is better) Translates to: AVHSSARWGLQS*NRPAAGRKQLL Trigger: CAGAAGCTGCTTTCTGCCTGCTGCAGGTCTGTTGCACGACTGTAGGCCCCAGCGAGCGCTGGAATGTACAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144064.5 |
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| 3UTR GCA 72 bp | CGTGCAACAGACCTGCAGCAGGCAGAAAGCAGCTTCTaGAGCCACCTGTTCCCATCCCTTTCTTCTTCCCAG | + |
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Preference number: 3 (lower is better) Translates to: RATDLQQAESSF*SHLFPSLSSSQ Trigger: CTGGGAAGAAGAAAGGGATGGGAACAGGTGGCTGCAGAAGCTGCTTTCTGCCTGCTGCAGGTCTGTTGCACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144064.5 |
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| 3UTR TCA 72 bp | TTCCCAGGTTGTTGGTGGGGTCAGCTGGGTCTAGGATaGTGGGCCGGTCTCCCTTCAGCTGTTTCTTCAGAA | + |
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Preference number: 3 (lower is better) Translates to: FPGCWWGQLGLG*WAGLPSAVSSE Trigger: TTCTGAAGAAACAGCTGAAGGGAGACCGGCCCATCATCCTAGACCCAGCTGACCCCACCAACAACCTGGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144064.5 |
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| 3UTR-3UTR CAA 90 bp | AGGGCGGGAACACAAGATGATTTGGCCTGCTGCATGGGCCAGATAGTAGTTGTTTGGGGCTGTAGGGGTTaGTCCAGAGTGTCCAATCCA | + |
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Preference number: 3 (lower is better) Translates to: RAGTQDDLACCMGQIVVVWGCRG*SRVSNP Trigger: TGGATTGGACACTCTGGACAAACCCCTACAGCCCCA...AACAACTACTATCTGGCCCATGCAGCAGGCCAAATCATCTTGTGTTCCCGCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144064.5 |
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| 3UTR-3UTR CAA 90 bp | GAAAGCAGCTTCTGCAGCCACCTGTTCCCATCCCTTTCTTCTTCCCAGGTTGTTGCTCCAGAGCATATTTaGAGGGCAACACTGCACCTC | + |
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Preference number: 3 (lower is better) Translates to: ESSFCSHLFPSLSSSQVVAPEHI*RATLHL Trigger: GAGGTGCAGTGTTGCCCTCAAAATATGCTCTGGAGC...AACAACCTGGGAAGAAGAAAGGGATGGGAACAGGTGGCTGCAGAAGCTGCTTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144064.5 |
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| 3UTR-3UTR CAA 90 bp | GCGGGAACACAAGATGATTTGGCCTGCTGCATGGGCCAGATAGTAGTTGTTTTCTTTCTTCTTCCCAGGTaGTTGGTGGGGTCAGCTGGG | + |
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Preference number: 3 (lower is better) Translates to: AGTQDDLACCMGQIVVVFFLLPR*LVGSAG Trigger: CCCAGCTGACCCCACCAACAACCTGGGAAGAAGAAA...GAAAACAACTACTATCTGGCCCATGCAGCAGGCCAAATCATCTTGTGTTCCCGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144064.5 |
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| 3UTR GCA 72 bp | AGGGAGAGGGCGGGAACACAAGATGATTTGGCCTGCTaGATGGGCCAGATAGTAGTTGTTTTCAAACAGGAG | + |
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Preference number: 3 (lower is better) Translates to: RERAGTQDDLAC*MGQIVVVFKQE Trigger: CTCCTGTTTGAAAACAACTACTATCTGGCCCATGCAGCAGGCCAAATCATCTTGTGTTCCCGCCCTCTCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031542.13 ENSMUST00000144064.5 |
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| 3UTR TCA 72 bp | TGTGACTCAAGGTGTCACTCTGCATTCAGTATGAGTTaGGTGTTTAGAGTTGGGGGTCGGGGACTAAGCAGG | + |
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Preference number: 3 (lower is better) Translates to: CDSRCHSAFSMS*VFRVGGRGLSR Trigger: CCTGCTTAGTCCCCGACCCCCAACTCTAAACACTCAACTCATACTGAATGCAGAGTGACACCTTGAGTCACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031542.13 ENSMUST00000144064.5 |
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| 3UTR TCA 72 bp | TTCCATTCTAAGAGGTTTCTGGAGAGGTGGGGAATCTaGCAGTCTGGGGTCTGCTCTTTGAGATTCGGTGAC | + |
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Preference number: 3 (lower is better) Translates to: FHSKRFLERWGI*QSGVCSLRFGD Trigger: GTCACCGAATCTCAAAGAGCAGACCCCAGACTGTCAGATTCCCCACCTCTCCAGAAACCTCTTAGAATGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031542.13 ENSMUST00000144064.5 |
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| 3UTR TCA 72 bp | CCAGGCGTAGATGGTCAGCAGCTCCAGAGCATATTTTaGGGGCAACACTGCACCTCTTCCATATTTACGTCT | + |
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Preference number: 3 (lower is better) Translates to: PGVDGQQLQSIF*GQHCTSSIFTS Trigger: AGACGTAAATATGGAAGAGGTGCAGTGTTGCCCTCAAAATATGCTCTGGAGCTGCTGACCATCTACGCCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144064.5 |
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| 3UTR CCA 72 bp | ATGGTATCATCAGGGTCGATGGTGAAAGGCTTGCTCTaGCCACCAGGATACTTCACAAAGACCAGGATCTCA | + |
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Preference number: 3 (lower is better) Translates to: MVSSGSMVKGLL*PPGYFTKTRIS Trigger: TGAGATCCTGGTCTTTGTGAAGTATCCTGGTGGCCAGAGCAAGCCTTTCACCATCGACCCTGATGATACCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144064.5 |
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| 3UTR TCA 72 bp | CTGGGCGAGTTTTCACAAAATGTCTCTGTAACTCTGTaGAGCTTGGTGAGAAGTCACCAGGGTAGCCCTTAC | + |
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Preference number: 3 (lower is better) Translates to: LGEFSQNVSVTL*SLVRSHQGSPY Trigger: GTAAGGGCTACCCTGGTGACTTCTCACCAAGCTTCACAGAGTTACAGAGACATTTTGTGAAAACTCGCCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144064.5 |
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| 3UTR TCA 72 bp | GCCGGTCTCCCTTCAGCTGTTTCTTCAGAAAGTTCCTaGCGACCTCGTTTTGGAAATTGTAGTACTTGGTCC | + |
|
Preference number: 3 (lower is better) Translates to: AGLPSAVSSESS*RPRFGNCSTWS Trigger: GGACCAAGTACTACAATTTCCAAAACGAGGTCGTCAGGAACTTTCTGAAGAAACAGCTGAAGGGAGACCGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144064.5 |
||
| 3UTR-3UTR CAA 90 bp | ATTCTAAGAGGTTTCTGGAGAGGTGGGGAATCTGACAGTCTGGGGTCTGCTCTTAACCCTTCATCCAGATaGAAGCTATCACTGCTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: ILRGFWRGGESDSLGSALNPSSR*KLSLLS Trigger: AGAGAGCAGTGATAGCTTCAATCTGGATGAAGGGTT...AAGAGCAGACCCCAGACTGTCAGATTCCCCACCTCTCCAGAAACCTCTTAGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144064.5 |
||
| 3UTR-3UTR CAA 90 bp | AGGGCGGGAACACAAGATGATTTGGCCTGCTGCATGGGCCAGATAGTAGTTGTTAGCACTTGTCATACATaGATACTGGATTGGTACCAT | + |
|
Preference number: 3 (lower is better) Translates to: RAGTQDDLACCMGQIVVVSTCHT*ILDWYH Trigger: ATGGTACCAATCCAGTATCAATGTATGACAAGTGCT...AACAACTACTATCTGGCCCATGCAGCAGGCCAAATCATCTTGTGTTCCCGCCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031542.13 ENSMUST00000144064.5 |
||
| 3UTR TCA 72 bp | CTTTCAGATCTAAGATGGTATCATCAGGGTCGATGGTaGAAGGCTTGCTCTGGCCACCAGGATACTTCACAA | + |
|
Preference number: 3 (lower is better) Translates to: LSDLRWYHQGRW*KACSGHQDTSQ Trigger: TTGTGAAGTATCCTGGTGGCCAGAGCAAGCCTTTCACCATCGACCCTGATGATACCATCTTAGATCTGAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144064.5 |
||
| 3UTR-3UTR CAA 90 bp | ATTCTAAGAGGTTTCTGGAGAGGTGGGGAATCTGACAGTCTGGGGTCTGCTCTTCTTCATTCTGTATTATaGGAAAACACAGGAGAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: ILRGFWRGGESDSLGSALLHSVL*ENTGEG Trigger: ACCCTCTCCTGTGTTTTCCAATAATACAGAATGAAG...AAGAGCAGACCCCAGACTGTCAGATTCCCCACCTCTCCAGAAACCTCTTAGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031542.13 ENSMUST00000144064.5 |
||
| 3UTR TCA 72 bp | CAGATAGTAGTTGTTTTCAAACAGGAGCATGCAGAATaGTGTGAAAGGCTTGTTAAGTCCAGGACCGCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: QIVVVFKQEHAE*CERLVKSRTAE Trigger: CTCAGCGGTCCTGGACTTAACAAGCCTTTCACATCATTCTGCATGCTCCTGTTTGAAAACAACTACTATCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031542.13 ENSMUST00000144064.5 |
||
| 3UTR TCA 72 bp | CAGGAGAGGGTTTGTTTGTTTGTTTGTTTGTTTATCTaGGACAGGGTTTCTCCGTATAGCTCTGGCTGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: QERVCLFVCLFI*DRVSPYSSGCS Trigger: AGAACAGCCAGAGCTATACGGAGAAACCCTGTCTCAGATAAACAAACAAACAAACAAACAAACCCTCTCCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031542.13 ENSMUST00000144064.5 |
||
| CDS-3UTR TCA 90 bp | ATGGATGAAGGGAGAGGGCGGGAACACAAGATGATTTGGCCTGCTGCATGGGCCACTGAACCTTTAGGGTaGGGGAGCGAGGGGCCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: MDEGRGREHKMIWPAAWATEPLG*GSEGPF Trigger: AAAGGGCCCCTCGCTCCCTCACCCTAAAGGTTCAGT...GGCCCATGCAGCAGGCCAAATCATCTTGTGTTCCCGCCCTCTCCCTTCATCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031542.13 |
||
| CDS-3UTR TCA 90 bp | ATGGATGAAGGGAGAGGGCGGGAACACAAGATGATTTGGCCTGCTGCATGGGCCCTCTGTGAAGCTTGGTaGGAAGTCACCAGGGTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: MDEGRGREHKMIWPAAWALCEAW*EVTRVA Trigger: GGCTACCCTGGTGACTTCTCACCAAGCTTCACAGAG...GGCCCATGCAGCAGGCCAAATCATCTTGTGTTCCCGCCCTCTCCCTTCATCCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031542.13 |
||
| CDS-3UTR GCA 90 bp | GAAAGCAGCTTCTGCAGCCACCTGTTCCCATCCCTTTCTTCTTCCCAGGTTGTTCTCTCCCAGGCATCCTaGCCTTCCTCTTTCCAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: ESSFCSHLFPSLSSSQVVLSQAS*PSSFQS Trigger: GGACTGGAAAGAGGAAGGGCAGGATGCCTGGGAGAG...AACAACCTGGGAAGAAGAAAGGGATGGGAACAGGTGGCTGCAGAAGCTGCTTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144064.5 |
||
| CDS-3UTR GCA 90 bp | ATGGATGAAGGGAGAGGGCGGGAACACAAGATGATTTGGCCTGCTGCATGGGCCTTCCCTCCTGATCTCTaGCTTCATCTTTCTGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: MDEGRGREHKMIWPAAWAFPPDL*LHLSDG Trigger: CCCATCAGAAAGATGAAGGCAGAGATCAGGAGGGAA...GGCCCATGCAGCAGGCCAAATCATCTTGTGTTCCCGCCCTCTCCCTTCATCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031542.13 |
||
| CDS-3UTR GCA 90 bp | CTGAGGGAAAGGATGTTTGAGGAAAAGAGACACAGGTGTGACTCAGCTCTCAGTCTCTCCCAGGCATCCTaGCCTTCCTCTTTCCAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LRERMFEEKRHRCDSALSLSQAS*PSSFQS Trigger: GGACTGGAAAGAGGAAGGGCAGGATGCCTGGGAGAG...ACTGAGAGCTGAGTCACACCTGTGTCTCTTTTCCTCAAACATCCTTTCCCTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031542.13 ENSMUST00000144064.5 |
||
| CDS-3UTR GCA 90 bp | CTCAGAAATTCTCTAAGTGCTGAGATAAAGGCATGCACCACCACTGCCCGGCTAGCTCCTGGAAGGAGATaGGCAGTTCCCCTCCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LRNSLSAEIKACTTTARLAPGRR*AVPLQS Trigger: ACTTTGGAGGGGAACTGCGCATCTCCTTCCAGGAGC...TAGCCGGGCAGTGGTGGTGCATGCCTTTATCTCAGCACTTAGAGAATTTCTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031542.13 |
||
| CDS-3UTR CCA 90 bp | AAGAGACACAGGTGTGACTCAGCTCTCAGTGTGACTCAAGGTGTCACTCTGCATTCTCCCAGGCGTAGATaGTCAGCAGCTCCAGAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: KRHRCDSALSVTQGVTLHSPRRR*SAAPEH Trigger: ATGCTCTGGAGCTGCTGACCATCTACGCCTGGGAGA...ATGCAGAGTGACACCTTGAGTCACACTGAGAGCTGAGTCACACCTGTGTCTCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031542.13 |
||
| CDS-3UTR TCA 90 bp | CACTGCCCGGCTATAGGAGAGGGTTTTAAGCAAGAGAAGGGAATGTTGATATTTCAGTCCCTCTGGGGCTaGAGGCTGTGTTCCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: HCPAIGEGFKQEKGMLIFQSLWG*RLCSRK Trigger: CTTCCTGGAACACAGCCTTCAGCCCCAGAGGGACTG...AAATATCAACATTCCCTTCTCTTGCTTAAAACCCTCTCCTATAGCCGGGCAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031542.13 |
||
| CDS-3UTR TCA 90 bp | CTCAGAAATTCTCTAAGTGCTGAGATAAAGGCATGCACCACCACTGCCCGGCTATGCCGGTGCTGGTTTTaGGTCTCTGGAAATAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LRNSLSAEIKACTTTARLCRCWF*VSGNRS Trigger: GGACCTATTTCCAGAGACTCAAAACCAGCACCGGCA...TAGCCGGGCAGTGGTGGTGCATGCCTTTATCTCAGCACTTAGAGAATTTCTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031542.13 ENSMUST00000144064.5 |
||
| CDS-3UTR TCA 90 bp | ATTCTAAGAGGTTTCTGGAGAGGTGGGGAATCTGACAGTCTGGGGTCTGCTCTTTGCCGGTGCTGGTTTTaGGTCTCTGGAAATAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: ILRGFWRGGESDSLGSALCRCWF*VSGNRS Trigger: GGACCTATTTCCAGAGACTCAAAACCAGCACCGGCA...AAGAGCAGACCCCAGACTGTCAGATTCCCCACCTCTCCAGAAACCTCTTAGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031542.13 ENSMUST00000144064.5 |
||
| CDS-3UTR GCA 90 bp | AGGGCGGGAACACAAGATGATTTGGCCTGCTGCATGGGCCAGATAGTAGTTGTTTTACGTCTCAGGCACTaGAGGTACCAGAACTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: RAGTQDDLACCMGQIVVVLRLRH*RYQNFT Trigger: GGTGAAGTTCTGGTACCTGCAGTGCCTGAGACGTAA...AACAACTACTATCTGGCCCATGCAGCAGGCCAAATCATCTTGTGTTCCCGCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031542.13 |
||
| CDS-3UTR GCA 90 bp | CTGAGGGAAAGGATGTTTGAGGAAAAGAGACACAGGTGTGACTCAGCTCTCAGTGTCGTGCAACAGACCTaGAGCAGGCAGAAAGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LRERMFEEKRHRCDSALSVVQQT*SRQKAA Trigger: AGCTGCTTTCTGCCTGCTGCAGGTCTGTTGCACGAC...ACTGAGAGCTGAGTCACACCTGTGTCTCTTTTCCTCAAACATCCTTTCCCTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031542.13 |
||
| CDS-3UTR CCA 90 bp | CTGAGGGAAAGGATGTTTGAGGAAAAGAGACACAGGTGTGACTCAGCTCTCAGTCTGTGTTCCAGGAAGTaGTCTAGACTGTCCCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LRERMFEEKRHRCDSALSLCSRK*SRLSPG Trigger: CCCTGGGGACAGTCTAGACCACTTCCTGGAACACAG...ACTGAGAGCTGAGTCACACCTGTGTCTCTTTTCCTCAAACATCCTTTCCCTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031542.13 |
||
| CDS-3UTR CCA 90 bp | GAAAGCAGCTTCTGCAGCCACCTGTTCCCATCCCTTTCTTCTTCCCAGGTTGTTATCACCCTGACTTCTTaGTCCAGGAGCAGCTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: ESSFCSHLFPSLSSSQVVITLTS*SRSSSS Trigger: TGATGAGCTGCTCCTGGACCAAGAAGTCAGGGTGAT...AACAACCTGGGAAGAAGAAAGGGATGGGAACAGGTGGCTGCAGAAGCTGCTTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144064.5 |
||
| CDS-3UTR GCA 90 bp | ATGTTTGAGGAAAAGAGACACAGGTGTGACTCAGCTCTCAGTGTGACTCAAGGTGCAGAAAGCAGCTTCTaGAGCCACCTGTTCCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: MFEEKRHRCDSALSVTQGAESSF*SHLFPS Trigger: GGATGGGAACAGGTGGCTGCAGAAGCTGCTTTCTGC...ACCTTGAGTCACACTGAGAGCTGAGTCACACCTGTGTCTCTTTTCCTCAAACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031542.13 |
||
| 3UTR CAA 72 bp | TCTAAGATGGTATCATCAGGGTCGATGGTGAAAGGCTaGCTCTGGCCACCAGGATACTTCACAAAGACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SKMVSSGSMVKG*LWPPGYFTKTR Trigger: CCTGGTCTTTGTGAAGTATCCTGGTGGCCAGAGCAAGCCTTTCACCATCGACCCTGATGATACCATCTTAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144064.5 |
||
| CDS-3UTR GCA 90 bp | GCGGGAACACAAGATGATTTGGCCTGCTGCATGGGCCAGATAGTAGTTGTTTTCTGTAGGCCAGGCTTCTaGTACAATGAATCAGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: AGTQDDLACCMGQIVVVFCRPGF*YNESAS Trigger: AGAGGCTGATTCATTGTAGCAGAAGCCTGGCCTACA...GAAAACAACTACTATCTGGCCCATGCAGCAGGCCAAATCATCTTGTGTTCCCGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031542.13 |
||
| CDS-3UTR CCA 90 bp | CTGAGGGAAAGGATGTTTGAGGAAAAGAGACACAGGTGTGACTCAGCTCTCAGTATCACCCTGACTTCTTaGTCCAGGAGCAGCTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: LRERMFEEKRHRCDSALSITLTS*SRSSSS Trigger: TGATGAGCTGCTCCTGGACCAAGAAGTCAGGGTGAT...ACTGAGAGCTGAGTCACACCTGTGTCTCTTTTCCTCAAACATCCTTTCCCTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031542.13 ENSMUST00000144064.5 |
||
| CDS-3UTR TCA 90 bp | AAGAGACACAGGTGTGACTCAGCTCTCAGTGTGACTCAAGGTGTCACTCTGCATAGGCTTCTGCTACAATaGATCAGCCTCTTCTTAATG | + |
|
Preference number: 4 (lower is better) Translates to: KRHRCDSALSVTQGVTLHRLLLQ*ISLFLM Trigger: CATTAAGAAGAGGCTGATTCATTGTAGCAGAAGCCT...ATGCAGAGTGACACCTTGAGTCACACTGAGAGCTGAGTCACACCTGTGTCTCTT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031542.13 |
||
| CDS-3UTR TCA 90 bp | ATTCTAAGAGGTTTCTGGAGAGGTGGGGAATCTGACAGTCTGGGGTCTGCTCTTAAGGTCTCCAGCACTTaGATGTTCACCTTAGAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: ILRGFWRGGESDSLGSALKVSST*MFTLEN Trigger: ATTCTCTAAGGTGAACATTCAAGTGCTGGAGACCTT...AAGAGCAGACCCCAGACTGTCAGATTCCCCACCTCTCCAGAAACCTCTTAGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031542.13 |
||
| CDS-3UTR GCA 90 bp | CTGAGGGAAAGGATGTTTGAGGAAAAGAGACACAGGTGTGACTCAGCTCTCAGTACTTGGTCCAGTAGATaGAGATGTCGCGGTAGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: LRERMFEEKRHRCDSALSTWSSR*RCRGSL Trigger: TAAACTACCGCGACATCTGCATCTACTGGACCAAGT...ACTGAGAGCTGAGTCACACCTGTGTCTCTTTTCCTCAAACATCCTTTCCCTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031542.13 |
||
| CDS-3UTR CCA 90 bp | AAACAGAGGCTGAGGGAAAGGATGTTTGAGGAAAAGAGACACAGGTGTGACTCATCTTGGTCAGATCTGTaGTTCAGCGTTGTCCCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: KQRLRERMFEEKRHRCDSSWSDL*FSVVPF Trigger: AAAGGGGACAACGCTGAACCACAGATCTGACCAAGA...TGAGTCACACCTGTGTCTCTTTTCCTCAAACATCCTTTCCCTCAGCCTCTGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031542.13 |
||
| CDS-3UTR CCA 90 bp | ATTCTAAGAGGTTTCTGGAGAGGTGGGGAATCTGACAGTCTGGGGTCTGCTCTTCCTGCTCTTCGAAACTaGAAAAGCAGCTTAAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: ILRGFWRGGESDSLGSALPALRN*KSSLRT Trigger: TGTTCTTAAGCTGCTTTTCCAGTTTCGAAGAGCAGG...AAGAGCAGACCCCAGACTGTCAGATTCCCCACCTCTCCAGAAACCTCTTAGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031542.13 |
||
| CDS-3UTR CCA 90 bp | GTCTGGCTTGGGTTAGTTTTCCATTCTAAGAGGTTTCTGGAGAGGTGGGGAATCCTTTTGCCCTCTCTGTaGGTAAGGACAATGATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: VWLGLVFHSKRFLERWGILLPSL*VRTMML Trigger: CAACATCATTGTCCTTACCCACAGAGAGGGCAAAAG...GATTCCCCACCTCTCCAGAAACCTCTTAGAATGGAAAACTAACCCAAGCCAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031542.13 |
||
| CDS-3UTR CCA 90 bp | AAGAGACACAGGTGTGACTCAGCTCTCAGTGTGACTCAAGGTGTCACTCTGCATCAAAGCATCGTAAGCTaGGAGGATATCCATCCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: KRHRCDSALSVTQGVTLHQSIVS*EDIHPN Trigger: ATTTGGATGGATATCCTCCCAGCTTACGATGCTTTG...ATGCAGAGTGACACCTTGAGTCACACTGAGAGCTGAGTCACACCTGTGTCTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031542.13 |
||
| CDS-3UTR CCA 90 bp | CTGAGGGAAAGGATGTTTGAGGAAAAGAGACACAGGTGTGACTCAGCTCTCAGTCTTTCAGATCTAAGATaGTATCATCAGGGTCGATGG | + |
|
Preference number: 4 (lower is better) Translates to: LRERMFEEKRHRCDSALSLSDLR*YHQGRW Trigger: CCATCGACCCTGATGATACCATCTTAGATCTGAAAG...ACTGAGAGCTGAGTCACACCTGTGTCTCTTTTCCTCAAACATCCTTTCCCTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031542.13 |
||
| 3UTR CAA 72 bp | TTTTCAAACAGGAGCATGCAGAATGATGTGAAAGGCTaGTTAAGTCCAGGACCGCTGAGTCTCGGTGAAATG | + |
|
Preference number: 4 (lower is better) Translates to: FSNRSMQNDVKG*LSPGPLSLGEM Trigger: CATTTCACCGAGACTCAGCGGTCCTGGACTTAACAAGCCTTTCACATCATTCTGCATGCTCCTGTTTGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031542.13 ENSMUST00000144064.5 |
||
| CDS-3UTR CCA 90 bp | AAACAGAGGCTGAGGGAAAGGATGTTTGAGGAAAAGAGACACAGGTGTGACTCAAACAGAATCATGTCTTaGTCAGATCTGTGGTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KQRLRERMFEEKRHRCDSNRIMS*SDLWFS Trigger: GCTGAACCACAGATCTGACCAAGACATGATTCTGTT...TGAGTCACACCTGTGTCTCTTTTCCTCAAACATCCTTTCCCTCAGCCTCTGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031542.13 |
||
| 3UTR CAA 72 bp | TCGATTACCCTAATGAGTATGATGGTGTCGCAGTCTTaGATCTCAAGCTCTTTAAGGCTCTCATCATCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SITLMSMMVSQS*ISSSLRLSSSS Trigger: GGAAGATGATGAGAGCCTTAAAGAGCTTGAGATCAAAGACTGCGACACCATCATACTCATTAGGGTAATCGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144064.5 |
||
| CDS-3UTR CCA 90 bp | CACTGCCCGGCTATAGGAGAGGGTTTTAAGCAAGAGAAGGGAATGTTGATATTTGGAAATTGTAGTACTTaGTCCAGTAGATGCAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: HCPAIGEGFKQEKGMLIFGNCST*SSRCRC Trigger: ACATCTGCATCTACTGGACCAAGTACTACAATTTCC...AAATATCAACATTCCCTTCTCTTGCTTAAAACCCTCTCCTATAGCCGGGCAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031542.13 |
||
| 3UTR CAA 72 bp | GGTTCGCTTCTTTATTTAACAAGCACTTGTCATACATaGATACTGGATTGGTACCATTCTAGAGCACAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GSLLYLTSTCHT*ILDWYHSRAQG Trigger: GCCTTGTGCTCTAGAATGGTACCAATCCAGTATCAATGTATGACAAGTGCTTGTTAAATAAAGAAGCGAACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031542.13 ENSMUST00000144064.5 |
||
| CDS CCA 90 bp | TTTCCCGAGGAGCCTCCCTTCACCACCTTAATCACCCTGACTTCTTaGTCCAGGAGCAGCTCATCACGGAAGCACTGTTCCCGAAAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: FPEEPPFTTLITLTS*SRSSSSRKHCSRKN Trigger: GTTCTTTCGGGAACAGTGCTTCCGTGATGAGCTGCTCCTGGACCAAGAAGTCAGGGTGATTAAGGTGGTGAAGGGAGGCTCCTCGGGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031542.13 ENSMUST00000146072.8 ENSMUST00000150361.2 |
||
| CDS CCA 90 bp | CTGGAAAAGCAGCTTAAGAACAGAATCATGTCTTGGTCAGATCTGTaGTTCAGCGTTGTCCCCTTTCCCGAGGAGCCTCCCTTCACCACC | + |
|
Preference number: 5 (lower is better) Translates to: LEKQLKNRIMSWSDL*FSVVPFPEEPPFTT Trigger: GGTGGTGAAGGGAGGCTCCTCGGGAAAGGGGACAACGCTGAACCACAGATCTGACCAAGACATGATTCTGTTCTTAAGCTGCTTTTCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031542.13 ENSMUST00000146072.8 ENSMUST00000150361.2 |
||
| CDS-3UTR CAA 90 bp | ATTCTAAGAGGTTTCTGGAGAGGTGGGGAATCTGACAGTCTGGGGTCTGCTCTTTTTCTTCTTCCCAGGTaGTTGGTGGGGTCAGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: ILRGFWRGGESDSLGSALFLLPR*LVGSAG Trigger: CCCAGCTGACCCCACCAACAACCTGGGAAGAAGAAA...AAGAGCAGACCCCAGACTGTCAGATTCCCCACCTCTCCAGAAACCTCTTAGAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000031542.13 |
||
| CDS-3UTR CAA 90 bp | CTCAGAAATTCTCTAAGTGCTGAGATAAAGGCATGCACCACCACTGCCCGGCTATCGATGGTGAAAGGCTaGCTCTGGCCACCAGGATAC | + |
|
Preference number: 5 (lower is better) Translates to: LRNSLSAEIKACTTTARLSMVKG*LWPPGY Trigger: GTATCCTGGTGGCCAGAGCAAGCCTTTCACCATCGA...TAGCCGGGCAGTGGTGGTGCATGCCTTTATCTCAGCACTTAGAGAATTTCTGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031542.13 |
||
| CDS TCA 90 bp | ACCCATCTCCCAGGCGTAGATGGTCAGCAGCTCCAGAGCATATTTTaGGGGCAACACTGCACCTCTTCCATATTTACGTCTCAGGCACAT | + |
|
Preference number: 5 (lower is better) Translates to: THLPGVDGQQLQSIF*GQHCTSSIFTSQAH Trigger: ATGTGCCTGAGACGTAAATATGGAAGAGGTGCAGTGTTGCCCTCAAAATATGCTCTGGAGCTGCTGACCATCTACGCCTGGGAGATGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124716.3 |
||
| CDS-3UTR CAA 90 bp | GTCTGGCTTGGGTTAGTTTTCCATTCTAAGAGGTTTCTGGAGAGGTGGGGAATCTGGGGCTGTAGGGGTTaGTCCAGAGTGTCCAATCCA | + |
|
Preference number: 5 (lower is better) Translates to: VWLGLVFHSKRFLERWGIWGCRG*SRVSNP Trigger: TGGATTGGACACTCTGGACAAACCCCTACAGCCCCA...GATTCCCCACCTCTCCAGAAACCTCTTAGAATGGAAAACTAACCCAAGCCAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000031542.13 |
||
| CDS-3UTR CAA 90 bp | CTGAGGGAAAGGATGTTTGAGGAAAAGAGACACAGGTGTGACTCAGCTCTCAGTGCTCCAGAGCATATTTaGAGGGCAACACTGCACCTC | + |
|
Preference number: 5 (lower is better) Translates to: LRERMFEEKRHRCDSALSAPEHI*RATLHL Trigger: GAGGTGCAGTGTTGCCCTCAAAATATGCTCTGGAGC...ACTGAGAGCTGAGTCACACCTGTGTCTCTTTTCCTCAAACATCCTTTCCCTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031542.13 |
||
| CDS-3UTR CAA 90 bp | GCGGGAACACAAGATGATTTGGCCTGCTGCATGGGCCAGATAGTAGTTGTTTTCGAACAGAATCATGTCTaGGTCAGATCTGTGGTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: AGTQDDLACCMGQIVVVFEQNHV*VRSVVQ Trigger: CTGAACCACAGATCTGACCAAGACATGATTCTGTTC...GAAAACAACTACTATCTGGCCCATGCAGCAGGCCAAATCATCTTGTGTTCCCGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031542.13 |
||
| CDS-3UTR CAA 90 bp | AAGAGACACAGGTGTGACTCAGCTCTCAGTGTGACTCAAGGTGTCACTCTGCATAACCCTTCATCCAGATaGAAGCTATCACTGCTCTCT | + |
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Preference number: 5 (lower is better) Translates to: KRHRCDSALSVTQGVTLHNPSSR*KLSLLS Trigger: AGAGAGCAGTGATAGCTTCAATCTGGATGAAGGGTT...ATGCAGAGTGACACCTTGAGTCACACTGAGAGCTGAGTCACACCTGTGTCTCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031542.13 |
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| CDS GCA 90 bp | AGCCTCTTCTTAATGAAGCTGATGACGACCTCCCGGTTTCTCGCCTaGTCTTCGAAACTGGAAAAGCAGCTTAAGAACAGAATCATGTCT | + |
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Preference number: 5 (lower is better) Translates to: SLFLMKLMTTSRFLA*SSKLEKQLKNRIMS Trigger: AGACATGATTCTGTTCTTAAGCTGCTTTTCCAGTTTCGAAGAGCAGGCGAGAAACCGGGAGGTCGTCATCAGCTTCATTAAGAAGAGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031542.13 ENSMUST00000150361.2 |
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| CDS-3UTR CAA 90 bp | ATGTTTGAGGAAAAGAGACACAGGTGTGACTCAGCTCTCAGTGTGACTCAAGGTCCTGACGACCTCGTTTaGGAAATTGTAGTACTTGGT | + |
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Preference number: 5 (lower is better) Translates to: MFEEKRHRCDSALSVTQGPDDLV*EIVVLG Trigger: ACCAAGTACTACAATTTCCAAAACGAGGTCGTCAGG...ACCTTGAGTCACACTGAGAGCTGAGTCACACCTGTGTCTCTTTTCCTCAAACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031542.13 |
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| CDS-3UTR CAA 90 bp | AAACAGAGGCTGAGGGAAAGGATGTTTGAGGAAAAGAGACACAGGTGTGACTCAATGGTGTCGCAGTCTTaGATCTCAAGCTCTTTAAGG | + |
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Preference number: 5 (lower is better) Translates to: KQRLRERMFEEKRHRCDSMVSQS*ISSSLR Trigger: CCTTAAAGAGCTTGAGATCAAAGACTGCGACACCAT...TGAGTCACACCTGTGTCTCTTTTCCTCAAACATCCTTTCCCTCAGCCTCTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031542.13 |
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| CDS CCA 72 bp | GAGCCTCCCTTCACCACCTTAATCACCCTGACTTCTTaGTCCAGGAGCAGCTCATCACGGAAGCACTGTTCC | + |
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Preference number: 6 (lower is better) Translates to: EPPFTTLITLTS*SRSSSSRKHCS Trigger: GGAACAGTGCTTCCGTGATGAGCTGCTCCTGGACCAAGAAGTCAGGGTGATTAAGGTGGTGAAGGGAGGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031542.13 ENSMUST00000146072.8 ENSMUST00000150361.2 |
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| CDS CAA 72 bp | GGAGCCTCCCTTCACCACCTTAATCACCCTGACTTCTaGGTCCAGGAGCAGCTCATCACGGAAGCACTGTTC | + |
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Preference number: 6 (lower is better) Translates to: GASLHHLNHPDF*VQEQLITEALF Trigger: GAACAGTGCTTCCGTGATGAGCTGCTCCTGGACCAAGAAGTCAGGGTGATTAAGGTGGTGAAGGGAGGCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031542.13 ENSMUST00000146072.8 ENSMUST00000150361.2 |
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| CDS CAA 90 bp | CTTTCCCGAGGAGCCTCCCTTCACCACCTTAATCACCCTGACTTCTaGGTCCAGGAGCAGCTCATCACGGAAGCACTGTTCCCGAAAGAA | + |
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Preference number: 6 (lower is better) Translates to: LSRGASLHHLNHPDF*VQEQLITEALFPKE Trigger: TTCTTTCGGGAACAGTGCTTCCGTGATGAGCTGCTCCTGGACCAAGAAGTCAGGGTGATTAAGGTGGTGAAGGGAGGCTCCTCGGGAAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031542.13 ENSMUST00000146072.8 ENSMUST00000150361.2 |
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| CDS CAA 90 bp | TACCCATCTCCCAGGCGTAGATGGTCAGCAGCTCCAGAGCATATTTaGAGGGCAACACTGCACCTCTTCCATATTTACGTCTCAGGCACA | + |
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Preference number: 6 (lower is better) Translates to: YPSPRRRWSAAPEHI*RATLHLFHIYVSGT Trigger: TGTGCCTGAGACGTAAATATGGAAGAGGTGCAGTGTTGCCCTCAAAATATGCTCTGGAGCTGCTGACCATCTACGCCTGGGAGATGGGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124716.3 |
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| CDS CCA 72 bp | AATAGGTCCTTCACCACCTTAATCACCCTGACTTCTTaGTCCAGGAGCAGCTCATCACGGAAGCACTGTTCC | + |
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Preference number: 6 (lower is better) Translates to: NRSFTTLITLTS*SRSSSSRKHCS Trigger: GGAACAGTGCTTCCGTGATGAGCTGCTCCTGGACCAAGAAGTCAGGGTGATTAAGGTGGTGAAGGACCTATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144064.5 |
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| CDS GCA 72 bp | TTAATGAAGCTGATGACGACCTCCCGGTTTCTCGCCTaGTCTTCGAAACTGGAAAAGCAGCTTAAGAACAGA | + |
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Preference number: 6 (lower is better) Translates to: LMKLMTTSRFLA*SSKLEKQLKNR Trigger: TCTGTTCTTAAGCTGCTTTTCCAGTTTCGAAGAGCAGGCGAGAAACCGGGAGGTCGTCATCAGCTTCATTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031542.13 ENSMUST00000150361.2 |
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