Pregenerated sensors for OASL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041827Ensembl transcript IDs: ENSMUST00000031540.11, ENSMUST00000112143.4
Found 110 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGGGGGCACAGGGGAAGGCTTCAGAGCCGCCCTGATGGAGGTCACTaGGAAGAATTTGGAGGTGGGACAACCTCAAGCAGGGTCCCTGTG | + |
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Preference number: 1 (lower is better) Translates to: WGHRGRLQSRPDGGH*EEFGGGTTSSRVPV Trigger: CACAGGGACCCTGCTTGAGGTTGTCCCACCTCCAAATTCTTCCCAGTGACCTCCATCAGGGCGGCTCTGAAGCCTTCCCCTGTGCCCCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
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| 3UTR GCA 90 bp | AGAGTGTCTGGCTGTACACGACTTCTCACACCCCCTCTGACTCCCTaGTGGCAAGGTACTGAAGACGTGGACCATCCGGGCAGAGGACGG | + |
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Preference number: 1 (lower is better) Translates to: RVSGCTRLLTPPLTP*WQGTEDVDHPGRGR Trigger: CCGTCCTCTGCCCGGATGGTCCACGTCTTCAGTACCTTGCCAGCAGGGAGTCAGAGGGGGTGTGAGAAGTCGTGTACAGCCAGACACTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
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| 3UTR CCA 90 bp | GTGTCTGGCTGTACACGACTTCTCACACCCCCTCTGACTCCCTGCTaGCAAGGTACTGAAGACGTGGACCATCCGGGCAGAGGACGGGAA | + |
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Preference number: 1 (lower is better) Translates to: VSGCTRLLTPPLTPC*QGTEDVDHPGRGRE Trigger: TTCCCGTCCTCTGCCCGGATGGTCCACGTCTTCAGTACCTTGCCAGCAGGGAGTCAGAGGGGGTGTGAGAAGTCGTGTACAGCCAGACAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
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| 3UTR-3UTR TCA 90 bp | GGCAGAAGTGGTTGGGGGCACAGGGGAAGGCTTCAGAGCCGCCCTGATGGAGGTGCAGAGGTCCTGGCATaGCTTCCCAGGGGACTGCAG | + |
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Preference number: 2 (lower is better) Translates to: GRSGWGHRGRLQSRPDGGAEVLA*LPRGLQ Trigger: CTGCAGTCCCCTGGGAAGTCATGCCAGGACCTCTGC...ACCTCCATCAGGGCGGCTCTGAAGCCTTCCCCTGTGCCCCCAACCACTTCTGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
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| 3UTR-3UTR TCA 90 bp | GGCAGAAGTGGTTGGGGGCACAGGGGAAGGCTTCAGAGCCGCCCTGATGGAGGTTTCTCACACCCCCTCTaGCTCCCTGCTGGCAAGGTA | + |
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Preference number: 2 (lower is better) Translates to: GRSGWGHRGRLQSRPDGGFSHPL*LPAGKV Trigger: TACCTTGCCAGCAGGGAGTCAGAGGGGGTGTGAGAA...ACCTCCATCAGGGCGGCTCTGAAGCCTTCCCCTGTGCCCCCAACCACTTCTGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
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| 3UTR-3UTR GCA 90 bp | ATGGAGGTCACTGGGAAGAATTTGGAGGTGGGACAACCTCAAGCAGGGTCCCTGCCCCCTCTGACTCCCTaGTGGCAAGGTACTGAAGAC | + |
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Preference number: 2 (lower is better) Translates to: MEVTGKNLEVGQPQAGSLPPLTP*WQGTED Trigger: GTCTTCAGTACCTTGCCAGCAGGGAGTCAGAGGGGG...CAGGGACCCTGCTTGAGGTTGTCCCACCTCCAAATTCTTCCCAGTGACCTCCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
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| 3UTR-3UTR CCA 90 bp | TACCTTGCCTTGGATAGTCGAAGGCAGGCAGAAGTGGTTGGGGGCACAGGGGAACCTCTGACTCCCTGCTaGCAAGGTACTGAAGACGTG | + |
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Preference number: 2 (lower is better) Translates to: YLALDSRRQAEVVGGTGEPLTPC*QGTEDV Trigger: CACGTCTTCAGTACCTTGCCAGCAGGGAGTCAGAGG...TTCCCCTGTGCCCCCAACCACTTCTGCCTGCCTTCGACTATCCAAGGCAAGGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
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| 3UTR CAA 90 bp | AGGCAGAGGTCCTGGCATGACTTCCCAGGGGACTGCAGAATTCCATaGTCACACAAGAGTGTCTGGCTGTACACGACTTCTCACACCCCC | + |
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Preference number: 2 (lower is better) Translates to: RQRSWHDFPGDCRIP*SHKSVWLYTTSHTP Trigger: GGGGGTGTGAGAAGTCGTGTACAGCCAGACACTCTTGTGTGACAATGGAATTCTGCAGTCCCCTGGGAAGTCATGCCAGGACCTCTGCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
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| 3UTR-3UTR GCA 90 bp | CCTGGCATGACTTCCCAGGGGACTGCAGAATTCCATTGTCACACAAGAGTGTCTCCCCCTCTGACTCCCTaGTGGCAAGGTACTGAAGAC | + |
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Preference number: 2 (lower is better) Translates to: PGMTSQGTAEFHCHTRVSPPLTP*WQGTED Trigger: GTCTTCAGTACCTTGCCAGCAGGGAGTCAGAGGGGG...AGACACTCTTGTGTGACAATGGAATTCTGCAGTCCCCTGGGAAGTCATGCCAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
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| 3UTR-3UTR CCA 90 bp | AGGTCACTGGGAAGAATTTGGAGGTGGGACAACCTCAAGCAGGGTCCCTGTGATCCTCTGACTCCCTGCTaGCAAGGTACTGAAGACGTG | + |
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Preference number: 2 (lower is better) Translates to: RSLGRIWRWDNLKQGPCDPLTPC*QGTEDV Trigger: CACGTCTTCAGTACCTTGCCAGCAGGGAGTCAGAGG...ATCACAGGGACCCTGCTTGAGGTTGTCCCACCTCCAAATTCTTCCCAGTGACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
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| 3UTR-3UTR TCA 90 bp | GTCTGGCTGTACACGACTTCTCACACCCCCTCTGACTCCCTGCTGGCAAGGTACAGGCTGAGTCTAGGATaGGACAATAAAACAGGCAGA | + |
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Preference number: 2 (lower is better) Translates to: VWLYTTSHTPSDSLLARYRLSLG*DNKTGR Trigger: TCTGCCTGTTTTATTGTCTCATCCTAGACTCAGCCT...GTACCTTGCCAGCAGGGAGTCAGAGGGGGTGTGAGAAGTCGTGTACAGCCAGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
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| 3UTR-3UTR TCA 90 bp | TTCAGAGCCGCCCTGATGGAGGTCACTGGGAAGAATTTGGAGGTGGGACAACCTAGGCTGAGTCTAGGATaGGACAATAAAACAGGCAGA | + |
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Preference number: 2 (lower is better) Translates to: FRAALMEVTGKNLEVGQPRLSLG*DNKTGR Trigger: TCTGCCTGTTTTATTGTCTCATCCTAGACTCAGCCT...AGGTTGTCCCACCTCCAAATTCTTCCCAGTGACCTCCATCAGGGCGGCTCTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
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| 3UTR CCA 72 bp | CCTACCTTGCCTTGGATAGTCGAAGGCAGGCAGAAGTaGTTGGGGGCACAGGGGAAGGCTTCAGAGCCGCCC | + |
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Preference number: 3 (lower is better) Translates to: PTLPWIVEGRQK*LGAQGKASEPP Trigger: GGGCGGCTCTGAAGCCTTCCCCTGTGCCCCCAACCACTTCTGCCTGCCTTCGACTATCCAAGGCAAGGTAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
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| 3UTR GCA 72 bp | GGCTGTACACGACTTCTCACACCCCCTCTGACTCCCTaGTGGCAAGGTACTGAAGACGTGGACCATCCGGGC | + |
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Preference number: 3 (lower is better) Translates to: GCTRLLTPPLTP*WQGTEDVDHPG Trigger: GCCCGGATGGTCCACGTCTTCAGTACCTTGCCAGCAGGGAGTCAGAGGGGGTGTGAGAAGTCGTGTACAGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
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| 3UTR-3UTR CAA 90 bp | GGCAGAAGTGGTTGGGGGCACAGGGGAAGGCTTCAGAGCCGCCCTGATGGAGGTGACTGCAGAATTCCATaGTCACACAAGAGTGTCTGG | + |
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Preference number: 3 (lower is better) Translates to: GRSGWGHRGRLQSRPDGGDCRIP*SHKSVW Trigger: CCAGACACTCTTGTGTGACAATGGAATTCTGCAGTC...ACCTCCATCAGGGCGGCTCTGAAGCCTTCCCCTGTGCCCCCAACCACTTCTGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
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| 3UTR-3UTR CAA 90 bp | ATAGTCGAAGGCAGGCAGAAGTGGTTGGGGGCACAGGGGAAGGCTTCAGAGCCGTTCACTGACACAGTCTaGACAGTGAGGCCACGAGGA | + |
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Preference number: 3 (lower is better) Translates to: IVEGRQKWLGAQGKASEPFTDTV*TVRPRG Trigger: TCCTCGTGGCCTCACTGTCAAGACTGTGTCAGTGAA...CGGCTCTGAAGCCTTCCCCTGTGCCCCCAACCACTTCTGCCTGCCTTCGACTAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
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| 3UTR CCA 72 bp | AGGGGAAGGCTTCAGAGCCGCCCTGATGGAGGTCACTaGGAAGAATTTGGAGGTGGGACAACCTCAAGCAGG | + |
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Preference number: 3 (lower is better) Translates to: RGRLQSRPDGGH*EEFGGGTTSSR Trigger: CCTGCTTGAGGTTGTCCCACCTCCAAATTCTTCCCAGTGACCTCCATCAGGGCGGCTCTGAAGCCTTCCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
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| 3UTR GCA 72 bp | GGAAGGCAGAGGTCCTGGCATGACTTCCCAGGGGACTaGAGAATTCCATTGTCACACAAGAGTGTCTGGCTG | + |
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Preference number: 3 (lower is better) Translates to: GRQRSWHDFPGD*RIPLSHKSVWL Trigger: CAGCCAGACACTCTTGTGTGACAATGGAATTCTGCAGTCCCCTGGGAAGTCATGCCAGGACCTCTGCCTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
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| 3UTR-3UTR CAA 90 bp | TACCTTGCCTTGGATAGTCGAAGGCAGGCAGAAGTGGTTGGGGGCACAGGGGAAGTCACTGGGAAGAATTaGGAGGTGGGACAACCTCAA | + |
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Preference number: 3 (lower is better) Translates to: YLALDSRRQAEVVGGTGEVTGKN*EVGQPQ Trigger: TTGAGGTTGTCCCACCTCCAAATTCTTCCCAGTGAC...TTCCCCTGTGCCCCCAACCACTTCTGCCTGCCTTCGACTATCCAAGGCAAGGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
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| 3UTR TCA 72 bp | GGACGGGAAGGAGAGGCAACTAGGCTGAGTCTAGGATaGGACAATAAAACAGGCAGAGCCACCGACAGAGGA | + |
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Preference number: 3 (lower is better) Translates to: GREGEATRLSLG*DNKTGRATDRG Trigger: TCCTCTGTCGGTGGCTCTGCCTGTTTTATTGTCTCATCCTAGACTCAGCCTAGTTGCCTCTCCTTCCCGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
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| 3UTR CCA 72 bp | GGGGACTGCAGAATTCCATTGTCACACAAGAGTGTCTaGCTGTACACGACTTCTCACACCCCCTCTGACTCC | + |
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Preference number: 3 (lower is better) Translates to: GDCRIPLSHKSV*LYTTSHTPSDS Trigger: GGAGTCAGAGGGGGTGTGAGAAGTCGTGTACAGCCAGACACTCTTGTGTGACAATGGAATTCTGCAGTCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
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| 3UTR-3UTR CAA 90 bp | GGTCACTGGGAAGAATTTGGAGGTGGGACAACCTCAAGCAGGGTCCCTGTGATTTTCACTGACACAGTCTaGACAGTGAGGCCACGAGGA | + |
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Preference number: 3 (lower is better) Translates to: GHWEEFGGGTTSSRVPVIFTDTV*TVRPRG Trigger: TCCTCGTGGCCTCACTGTCAAGACTGTGTCAGTGAA...AATCACAGGGACCCTGCTTGAGGTTGTCCCACCTCCAAATTCTTCCCAGTGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
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| CDS-3UTR TCA 90 bp | ATAGTCGAAGGCAGGCAGAAGTGGTTGGGGGCACAGGGGAAGGCTTCAGAGCCGGGCCTTCATCCAGCCTaGAGTTGGCATCCTCCCGGG | + |
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Preference number: 4 (lower is better) Translates to: IVEGRQKWLGAQGKASEPGLHPA*SWHPPG Trigger: CCCGGGAGGATGCCAACTTCAGGCTGGATGAAGGCC...CGGCTCTGAAGCCTTCCCCTGTGCCCCCAACCACTTCTGCCTGCCTTCGACTAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
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| CDS-3UTR CCA 90 bp | ATAGTCGAAGGCAGGCAGAAGTGGTTGGGGGCACAGGGGAAGGCTTCAGAGCCGTCCAGGATGTGGCCCTaGAACTCCAGGCGCTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: IVEGRQKWLGAQGKASEPSRMWP*NSRRCS Trigger: GGAGCAGCGCCTGGAGTTCCAGGGCCACATCCTGGA...CGGCTCTGAAGCCTTCCCCTGTGCCCCCAACCACTTCTGCCTGCCTTCGACTAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
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| CDS-3UTR TCA 90 bp | CCTACCTTGCCTTGGATAGTCGAAGGCAGGCAGAAGTGGTTGGGGGCACAGGGGGTTGGCTGCAGCCACTaGGCCACAAAGGAGTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: PTLPWIVEGRQKWLGAQGVGCSH*ATKESS Trigger: GCTGGACTCCTTTGTGGCTCAGTGGCTGCAGCCAAC...CCCCTGTGCCCCCAACCACTTCTGCCTGCCTTCGACTATCCAAGGCAAGGTAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
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| CDS-3UTR TCA 90 bp | ATAGTCGAAGGCAGGCAGAAGTGGTTGGGGGCACAGGGGAAGGCTTCAGAGCCGCACTGGTTGGCCCGCTaGGCCACTATGTCCCATCTG | + |
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Preference number: 4 (lower is better) Translates to: IVEGRQKWLGAQGKASEPHWLAR*ATMSHL Trigger: CAGATGGGACATAGTGGCTCAGCGGGCCAACCAGTG...CGGCTCTGAAGCCTTCCCCTGTGCCCCCAACCACTTCTGCCTGCCTTCGACTAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
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| CDS-3UTR GCA 90 bp | AGTGTCTGGCTGTACACGACTTCTCACACCCCCTCTGACTCCCTGCTGGCAAGGTGGCATCCTCCCGGGTaGCCGCTTCCCAGGCATAGA | + |
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Preference number: 4 (lower is better) Translates to: SVWLYTTSHTPSDSLLARWHPPG*PLPRHR Trigger: TCTATGCCTGGGAAGCGGGCACCCGGGAGGATGCCA...CCTTGCCAGCAGGGAGTCAGAGGGGGTGTGAGAAGTCGTGTACAGCCAGACACT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
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| CDS-3UTR CCA 90 bp | TACCTTGCCTTGGATAGTCGAAGGCAGGCAGAAGTGGTTGGGGGCACAGGGGAACGTAGACCTCGGAGCTaGGACAGGAAGGGCCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: YLALDSRRQAEVVGGTGERRPRS*DRKGPG Trigger: CCCTGGGCCCTTCCTGTCCCAGCTCCGAGGTCTACG...TTCCCCTGTGCCCCCAACCACTTCTGCCTGCCTTCGACTATCCAAGGCAAGGTA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
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| CDS-3UTR CCA 90 bp | GGCAGAAGTGGTTGGGGGCACAGGGGAAGGCTTCAGAGCCGCCCTGATGGAGGTGGATCTCAGGGGAGATaGTGTCCAGCAGGCAGATGT | + |
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Preference number: 4 (lower is better) Translates to: GRSGWGHRGRLQSRPDGGGSQGR*CPAGRC Trigger: ACATCTGCCTGCTGGACACCATCTCCCCTGAGATCC...ACCTCCATCAGGGCGGCTCTGAAGCCTTCCCCTGTGCCCCCAACCACTTCTGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
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| CDS-3UTR TCA 90 bp | AGTGTCTGGCTGTACACGACTTCTCACACCCCCTCTGACTCCCTGCTGGCAAGGGTTGGCTGCAGCCACTaGGCCACAAAGGAGTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: SVWLYTTSHTPSDSLLARVGCSH*ATKESS Trigger: GCTGGACTCCTTTGTGGCTCAGTGGCTGCAGCCAAC...CCTTGCCAGCAGGGAGTCAGAGGGGGTGTGAGAAGTCGTGTACAGCCAGACACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
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| CDS-3UTR GCA 90 bp | ATAGTCGAAGGCAGGCAGAAGTGGTTGGGGGCACAGGGGAAGGCTTCAGAGCCGTCCTGCCTCAGGAACTaGTCCACTGTCTGCACGGTC | + |
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Preference number: 4 (lower is better) Translates to: IVEGRQKWLGAQGKASEPSCLRN*STVCTV Trigger: GACCGTGCAGACAGTGGAGCAGTTCCTGAGGCAGGA...CGGCTCTGAAGCCTTCCCCTGTGCCCCCAACCACTTCTGCCTGCCTTCGACTAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
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| CDS-3UTR CCA 90 bp | TCACTGGGAAGAATTTGGAGGTGGGACAACCTCAAGCAGGGTCCCTGTGATTGGCGTAGACCTCGGAGCTaGGACAGGAAGGGCCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: SLGRIWRWDNLKQGPCDWRRPRS*DRKGPG Trigger: CCCTGGGCCCTTCCTGTCCCAGCTCCGAGGTCTACG...CCAATCACAGGGACCCTGCTTGAGGTTGTCCCACCTCCAAATTCTTCCCAGTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
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| CDS-3UTR CCA 90 bp | GAAGGCAGAGGTCCTGGCATGACTTCCCAGGGGACTGCAGAATTCCATTGTCACCAGTCCTCCAGGATGTaGCCCTGGAACTCCAGGCGC | + |
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Preference number: 4 (lower is better) Translates to: EGRGPGMTSQGTAEFHCHQSSRM*PWNSRR Trigger: GCGCCTGGAGTTCCAGGGCCACATCCTGGAGGACTG...GTGACAATGGAATTCTGCAGTCCCCTGGGAAGTCATGCCAGGACCTCTGCCTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
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| CDS-3UTR TCA 90 bp | ATGGAGGTCACTGGGAAGAATTTGGAGGTGGGACAACCTCAAGCAGGGTCCCTGCACTGGTTGGCCCGCTaGGCCACTATGTCCCATCTG | + |
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Preference number: 4 (lower is better) Translates to: MEVTGKNLEVGQPQAGSLHWLAR*ATMSHL Trigger: CAGATGGGACATAGTGGCTCAGCGGGCCAACCAGTG...CAGGGACCCTGCTTGAGGTTGTCCCACCTCCAAATTCTTCCCAGTGACCTCCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
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| CDS-3UTR GCA 90 bp | AGTGTCTGGCTGTACACGACTTCTCACACCCCCTCTGACTCCCTGCTGGCAAGGCACCTGGATATCGGGTaGTCTCTTCACCCTCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: SVWLYTTSHTPSDSLLARHLDIG*SLHPPA Trigger: AGCTGGAGGGTGAAGAGAGCACCCGATATCCAGGTG...CCTTGCCAGCAGGGAGTCAGAGGGGGTGTGAGAAGTCGTGTACAGCCAGACACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
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| CDS-3UTR CCA 90 bp | GTCTGGCTGTACACGACTTCTCACACCCCCTCTGACTCCCTGCTGGCAAGGTACTTTCCACTCTCTGGTTaGCTGCAGCCACTGAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: VWLYTTSHTPSDSLLARYFPLSG*LQPLSH Trigger: GTGGCTCAGTGGCTGCAGCCAACCAGAGAGTGGAAA...GTACCTTGCCAGCAGGGAGTCAGAGGGGGTGTGAGAAGTCGTGTACAGCCAGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
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| CDS-3UTR CCA 90 bp | GTCTGGCTGTACACGACTTCTCACACCCCCTCTGACTCCCTGCTGGCAAGGTACCTTCTGCCACATTGTTaGTGGGGTCTGCTGGGTCCA | + |
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Preference number: 4 (lower is better) Translates to: VWLYTTSHTPSDSLLARYLLPHC*WGLLGP Trigger: TGGACCCAGCAGACCCCACCAACAATGTGGCAGAAG...GTACCTTGCCAGCAGGGAGTCAGAGGGGGTGTGAGAAGTCGTGTACAGCCAGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
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| CDS-3UTR CCA 90 bp | GGTCACTGGGAAGAATTTGGAGGTGGGACAACCTCAAGCAGGGTCCCTGTGATTTCCAGGATGTGGCCCTaGAACTCCAGGCGCTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: GHWEEFGGGTTSSRVPVISRMWP*NSRRCS Trigger: GGAGCAGCGCCTGGAGTTCCAGGGCCACATCCTGGA...AATCACAGGGACCCTGCTTGAGGTTGTCCCACCTCCAAATTCTTCCCAGTGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
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| CDS-3UTR TCA 90 bp | TACCTTGCCTTGGATAGTCGAAGGCAGGCAGAAGTGGTTGGGGGCACAGGGGAAAGTCTCAGGACAGCCTaGTGGTGCTTGGCTTCTTCC | + |
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Preference number: 4 (lower is better) Translates to: YLALDSRRQAEVVGGTGESLRTA*WCLASS Trigger: GGAAGAAGCCAAGCACCATCAGGCTGTCCTGAGACT...TTCCCCTGTGCCCCCAACCACTTCTGCCTGCCTTCGACTATCCAAGGCAAGGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
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| CDS-3UTR GCA 90 bp | GAAGGCAGAGGTCCTGGCATGACTTCCCAGGGGACTGCAGAATTCCATTGTCACTCCTGCCTCAGGAACTaGTCCACTGTCTGCACGGTC | + |
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Preference number: 4 (lower is better) Translates to: EGRGPGMTSQGTAEFHCHSCLRN*STVCTV Trigger: GACCGTGCAGACAGTGGAGCAGTTCCTGAGGCAGGA...GTGACAATGGAATTCTGCAGTCCCCTGGGAAGTCATGCCAGGACCTCTGCCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
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| CDS-3UTR GCA 90 bp | ATAGTCGAAGGCAGGCAGAAGTGGTTGGGGGCACAGGGGAAGGCTTCAGAGCCGTCACGGAAATTCTCCTaGCTCAGGAACTGCTCCACT | + |
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Preference number: 4 (lower is better) Translates to: IVEGRQKWLGAQGKASEPSRKFS*LRNCST Trigger: AGTGGAGCAGTTCCTGAGGCAGGAGAATTTCCGTGA...CGGCTCTGAAGCCTTCCCCTGTGCCCCCAACCACTTCTGCCTGCCTTCGACTAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
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| CDS-3UTR GCA 90 bp | GCCCTGATGGAGGTCACTGGGAAGAATTTGGAGGTGGGACAACCTCAAGCAGGGCACCTGGATATCGGGTaGTCTCTTCACCCTCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: ALMEVTGKNLEVGQPQAGHLDIG*SLHPPA Trigger: AGCTGGAGGGTGAAGAGAGCACCCGATATCCAGGTG...CCCTGCTTGAGGTTGTCCCACCTCCAAATTCTTCCCAGTGACCTCCATCAGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
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| CDS-3UTR CCA 90 bp | CCTACCTTGCCTTGGATAGTCGAAGGCAGGCAGAAGTGGTTGGGGGCACAGGGGTGCTTGGCTTCTTCCTaGAAGCTGTGGAAACAGCTC | + |
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Preference number: 4 (lower is better) Translates to: PTLPWIVEGRQKWLGAQGCLASS*KLWKQL Trigger: GAGCTGTTTCCACAGCTTCCAGGAAGAAGCCAAGCA...CCCCTGTGCCCCCAACCACTTCTGCCTGCCTTCGACTATCCAAGGCAAGGTAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
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| CDS-3UTR CCA 90 bp | AAGAGTGTCTGGCTGTACACGACTTCTCACACCCCCTCTGACTCCCTGCTGGCATCCAGCAGGCAGATGTaGGTGTCGCAGAAGATTCCG | + |
|
Preference number: 4 (lower is better) Translates to: KSVWLYTTSHTPSDSLLASSRQM*VSQKIP Trigger: CGGAATCTTCTGCGACACCCACATCTGCCTGCTGGA...TGCCAGCAGGGAGTCAGAGGGGGTGTGAGAAGTCGTGTACAGCCAGACACTCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
||
| CDS-3UTR TCA 90 bp | AGTGTCTGGCTGTACACGACTTCTCACACCCCCTCTGACTCCCTGCTGGCAAGGTTCGCTGCAGCTCGCTaGAGGATGGAGAGAAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: SVWLYTTSHTPSDSLLARFAAAR*RMERNF Trigger: GAAATTTCTCTCCATCCTTCAGCGAGCTGCAGCGAA...CCTTGCCAGCAGGGAGTCAGAGGGGGTGTGAGAAGTCGTGTACAGCCAGACACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
||
| CDS-3UTR TCA 90 bp | TTCAGAGCCGCCCTGATGGAGGTCACTGGGAAGAATTTGGAGGTGGGACAACCTGCTGGTACCAGTGTTTaGCCAACCGAAGGAGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: FRAALMEVTGKNLEVGQPAGTSV*PTEGGS Trigger: AGAGCCTCCTTCGGTTGGTCAAACACTGGTACCAGC...AGGTTGTCCCACCTCCAAATTCTTCCCAGTGACCTCCATCAGGGCGGCTCTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
||
| CDS-3UTR TCA 90 bp | CAGGGGACTGCAGAATTCCATTGTCACACAAGAGTGTCTGGCTGTACACGACTTGGCCTTCATCCAGCCTaGAGTTGGCATCCTCCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: QGTAEFHCHTRVSGCTRLGLHPA*SWHPPG Trigger: CCCGGGAGGATGCCAACTTCAGGCTGGATGAAGGCC...AAGTCGTGTACAGCCAGACACTCTTGTGTGACAATGGAATTCTGCAGTCCCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
||
| CDS-3UTR CCA 90 bp | AATTCCATTGTCACACAAGAGTGTCTGGCTGTACACGACTTCTCACACCCCCTCCAGTCCTCCAGGATGTaGCCCTGGAACTCCAGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: NSIVTQECLAVHDFSHPLQSSRM*PWNSRR Trigger: GCGCCTGGAGTTCCAGGGCCACATCCTGGAGGACTG...GAGGGGGTGTGAGAAGTCGTGTACAGCCAGACACTCTTGTGTGACAATGGAATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
||
| CDS-3UTR TCA 90 bp | TCACTGGGAAGAATTTGGAGGTGGGACAACCTCAAGCAGGGTCCCTGTGATTGGGCTGGTACCAGTGTTTaGCCAACCGAAGGAGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SLGRIWRWDNLKQGPCDWAGTSV*PTEGGS Trigger: AGAGCCTCCTTCGGTTGGTCAAACACTGGTACCAGC...CCAATCACAGGGACCCTGCTTGAGGTTGTCCCACCTCCAAATTCTTCCCAGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
||
| CDS-3UTR CCA 90 bp | TCACTGGGAAGAATTTGGAGGTGGGACAACCTCAAGCAGGGTCCCTGTGATTGGTTTCCACTCTCTGGTTaGCTGCAGCCACTGAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SLGRIWRWDNLKQGPCDWFPLSG*LQPLSH Trigger: GTGGCTCAGTGGCTGCAGCCAACCAGAGAGTGGAAA...CCAATCACAGGGACCCTGCTTGAGGTTGTCCCACCTCCAAATTCTTCCCAGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
||
| CDS-3UTR CCA 90 bp | AAGAGTGTCTGGCTGTACACGACTTCTCACACCCCCTCTGACTCCCTGCTGGCATGCTTGGCTTCTTCCTaGAAGCTGTGGAAACAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: KSVWLYTTSHTPSDSLLACLASS*KLWKQL Trigger: GAGCTGTTTCCACAGCTTCCAGGAAGAAGCCAAGCA...TGCCAGCAGGGAGTCAGAGGGGGTGTGAGAAGTCGTGTACAGCCAGACACTCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
||
| CDS-3UTR CCA 90 bp | GAAGGCAGAGGTCCTGGCATGACTTCCCAGGGGACTGCAGAATTCCATTGTCACCAGCCTGATGGTGCTTaGCTTCTTCCTGGAAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: EGRGPGMTSQGTAEFHCHQPDGA*LLPGSC Trigger: ACAGCTTCCAGGAAGAAGCCAAGCACCATCAGGCTG...GTGACAATGGAATTCTGCAGTCCCCTGGGAAGTCATGCCAGGACCTCTGCCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
||
| CDS-3UTR CCA 90 bp | GTCTGGCTGTACACGACTTCTCACACCCCCTCTGACTCCCTGCTGGCAAGGTACCAGCTCGCTGAAGGATaGAGAGAAATTTCCTGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: VWLYTTSHTPSDSLLARYQLAEG*REISWV Trigger: TACCCAGGAAATTTCTCTCCATCCTTCAGCGAGCTG...GTACCTTGCCAGCAGGGAGTCAGAGGGGGTGTGAGAAGTCGTGTACAGCCAGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
||
| CDS-3UTR CCA 90 bp | AAGAGTGTCTGGCTGTACACGACTTCTCACACCCCCTCTGACTCCCTGCTGGCAGCAGCGTGTAGTGCTTaGTCCAGTAGATACAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: KSVWLYTTSHTPSDSLLAAACSA*SSRYRG Trigger: TCCTCTGTATCTACTGGACCAAGCACTACACGCTGC...TGCCAGCAGGGAGTCAGAGGGGGTGTGAGAAGTCGTGTACAGCCAGACACTCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
||
| CDS-3UTR CCA 90 bp | GGTCACTGGGAAGAATTTGGAGGTGGGACAACCTCAAGCAGGGTCCCTGTGATTGGATCTCAGGGGAGATaGTGTCCAGCAGGCAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: GHWEEFGGGTTSSRVPVIGSQGR*CPAGRC Trigger: ACATCTGCCTGCTGGACACCATCTCCCCTGAGATCC...AATCACAGGGACCCTGCTTGAGGTTGTCCCACCTCCAAATTCTTCCCAGTGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
||
| 3UTR CAA 72 bp | CCATTTGAAAGGAACTTGATCCCCTCCTACCTTGCCTaGGATAGTCGAAGGCAGGCAGAAGTGGTTGGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PFERNLIPSYLA*DSRRQAEVVGG Trigger: GCCCCCAACCACTTCTGCCTGCCTTCGACTATCCAAGGCAAGGTAGGAGGGGATCAAGTTCCTTTCAAATGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
||
| CDS-3UTR TCA 90 bp | CCTGGCATGACTTCCCAGGGGACTGCAGAATTCCATTGTCACACAAGAGTGTCTAGTCTCAGGACAGCCTaGTGGTGCTTGGCTTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PGMTSQGTAEFHCHTRVSSLRTA*WCLASS Trigger: GGAAGAAGCCAAGCACCATCAGGCTGTCCTGAGACT...AGACACTCTTGTGTGACAATGGAATTCTGCAGTCCCCTGGGAAGTCATGCCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
||
| CDS-3UTR CCA 90 bp | GAAGGCAGAGGTCCTGGCATGACTTCCCAGGGGACTGCAGAATTCCATTGTCACCAGCTCGCTGAAGGATaGAGAGAAATTTCCTGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: EGRGPGMTSQGTAEFHCHQLAEG*REISWV Trigger: TACCCAGGAAATTTCTCTCCATCCTTCAGCGAGCTG...GTGACAATGGAATTCTGCAGTCCCCTGGGAAGTCATGCCAGGACCTCTGCCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
||
| CDS-3UTR CCA 90 bp | GCCCTGATGGAGGTCACTGGGAAGAATTTGGAGGTGGGACAACCTCAAGCAGGGTCTCTCACATACTGCTaGTACCAGTGTTTGACCAAC | + |
|
Preference number: 4 (lower is better) Translates to: ALMEVTGKNLEVGQPQAGSLTYC*YQCLTN Trigger: GTTGGTCAAACACTGGTACCAGCAGTATGTGAGAGA...CCCTGCTTGAGGTTGTCCCACCTCCAAATTCTTCCCAGTGACCTCCATCAGGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
||
| CDS-3UTR CCA 90 bp | ATAGTCGAAGGCAGGCAGAAGTGGTTGGGGGCACAGGGGAAGGCTTCAGAGCCGCTTTCAGTTTCTTTATaGGTTCATAAGGGTTCACCC | + |
|
Preference number: 4 (lower is better) Translates to: IVEGRQKWLGAQGKASEPLSVSL*VHKGSP Trigger: GGGTGAACCCTTATGAACCCATAAAGAAACTGAAAG...CGGCTCTGAAGCCTTCCCCTGTGCCCCCAACCACTTCTGCCTGCCTTCGACTAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
||
| CDS-3UTR CCA 90 bp | CAGGGGACTGCAGAATTCCATTGTCACACAAGAGTGTCTGGCTGTACACGACTTTCCAGCAGGCAGATGTaGGTGTCGCAGAAGATTCCG | + |
|
Preference number: 4 (lower is better) Translates to: QGTAEFHCHTRVSGCTRLSSRQM*VSQKIP Trigger: CGGAATCTTCTGCGACACCCACATCTGCCTGCTGGA...AAGTCGTGTACAGCCAGACACTCTTGTGTGACAATGGAATTCTGCAGTCCCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
||
| CDS-3UTR CCA 90 bp | GCCCTGATGGAGGTCACTGGGAAGAATTTGGAGGTGGGACAACCTCAAGCAGGGTTTTTCACAAAGACCTaGATCTCAGGGGAGATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: ALMEVTGKNLEVGQPQAGFFTKT*ISGEMV Trigger: CACCATCTCCCCTGAGATCCAGGTCTTTGTGAAAAA...CCCTGCTTGAGGTTGTCCCACCTCCAAATTCTTCCCAGTGACCTCCATCAGGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
||
| CDS-3UTR GCA 90 bp | CCTGGCATGACTTCCCAGGGGACTGCAGAATTCCATTGTCACACAAGAGTGTCTTCACGGAAATTCTCCTaGCTCAGGAACTGCTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: PGMTSQGTAEFHCHTRVSSRKFS*LRNCST Trigger: AGTGGAGCAGTTCCTGAGGCAGGAGAATTTCCGTGA...AGACACTCTTGTGTGACAATGGAATTCTGCAGTCCCCTGGGAAGTCATGCCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
||
| CDS-3UTR CCA 90 bp | GCCCTGATGGAGGTCACTGGGAAGAATTTGGAGGTGGGACAACCTCAAGCAGGGTGGAGAGAAATTTCCTaGGTACCCATTAGCCTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: ALMEVTGKNLEVGQPQAGWREIS*VPISLD Trigger: ATCAAGGCTAATGGGTACCCAGGAAATTTCTCTCCA...CCCTGCTTGAGGTTGTCCCACCTCCAAATTCTTCCCAGTGACCTCCATCAGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
||
| CDS-3UTR CCA 90 bp | ATGGAGGTCACTGGGAAGAATTTGGAGGTGGGACAACCTCAAGCAGGGTCCCTGTCTCTCACATACTGCTaGTACCAGTGTTTGACCAAC | + |
|
Preference number: 4 (lower is better) Translates to: MEVTGKNLEVGQPQAGSLSLTYC*YQCLTN Trigger: GTTGGTCAAACACTGGTACCAGCAGTATGTGAGAGA...CAGGGACCCTGCTTGAGGTTGTCCCACCTCCAAATTCTTCCCAGTGACCTCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
||
| 3UTR CAA 72 bp | TCCTGGCATGACTTCCCAGGGGACTGCAGAATTCCATaGTCACACAAGAGTGTCTGGCTGTACACGACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SWHDFPGDCRIP*SHKSVWLYTTS Trigger: AGAAGTCGTGTACAGCCAGACACTCTTGTGTGACAATGGAATTCTGCAGTCCCCTGGGAAGTCATGCCAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
||
| CDS-3UTR CCA 90 bp | CAGGGGACTGCAGAATTCCATTGTCACACAAGAGTGTCTGGCTGTACACGACTTGCAGCGTGTAGTGCTTaGTCCAGTAGATACAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: QGTAEFHCHTRVSGCTRLAACSA*SSRYRG Trigger: TCCTCTGTATCTACTGGACCAAGCACTACACGCTGC...AAGTCGTGTACAGCCAGACACTCTTGTGTGACAATGGAATTCTGCAGTCCCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
||
| CDS-3UTR CCA 90 bp | CCTGGCATGACTTCCCAGGGGACTGCAGAATTCCATTGTCACACAAGAGTGTCTTGGAGAGAAATTTCCTaGGTACCCATTAGCCTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: PGMTSQGTAEFHCHTRVSWREIS*VPISLD Trigger: ATCAAGGCTAATGGGTACCCAGGAAATTTCTCTCCA...AGACACTCTTGTGTGACAATGGAATTCTGCAGTCCCCTGGGAAGTCATGCCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
||
| CDS-3UTR CCA 90 bp | TCACTGGGAAGAATTTGGAGGTGGGACAACCTCAAGCAGGGTCCCTGTGATTGGCTTTCAGTTTCTTTATaGGTTCATAAGGGTTCACCC | + |
|
Preference number: 4 (lower is better) Translates to: SLGRIWRWDNLKQGPCDWLSVSL*VHKGSP Trigger: GGGTGAACCCTTATGAACCCATAAAGAAACTGAAAG...CCAATCACAGGGACCCTGCTTGAGGTTGTCCCACCTCCAAATTCTTCCCAGTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
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| CDS-3UTR CCA 90 bp | AATTCCATTGTCACACAAGAGTGTCTGGCTGTACACGACTTCTCACACCCCCTCTTTTTCACAAAGACCTaGATCTCAGGGGAGATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: NSIVTQECLAVHDFSHPLFFTKT*ISGEMV Trigger: CACCATCTCCCCTGAGATCCAGGTCTTTGTGAAAAA...GAGGGGGTGTGAGAAGTCGTGTACAGCCAGACACTCTTGTGTGACAATGGAATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
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| CDS CCA 90 bp | AACCAGTCCTCCAGGATGTGGCCCTGGAACTCCAGGCGCTGCTCCTaGCATCGAAGGCCCTGCCTGTCTTCTATCTGCTGCTTCAGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: NQSSRMWPWNSRRCS*HRRPCLSSICCFRF Trigger: GAACCTGAAGCAGCAGATAGAAGACAGGCAGGGCCTTCGATGCCAGGAGCAGCGCCTGGAGTTCCAGGGCCACATCCTGGAGGACTGGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
||
| CDS-3UTR CAA 90 bp | AGTGTCTGGCTGTACACGACTTCTCACACCCCCTCTGACTCCCTGCTGGCAAGGCCTTCTGCCACATTGTaGGTGGGGTCTGCTGGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SVWLYTTSHTPSDSLLARPSATL*VGSAGS Trigger: GGACCCAGCAGACCCCACCAACAATGTGGCAGAAGG...CCTTGCCAGCAGGGAGTCAGAGGGGGTGTGAGAAGTCGTGTACAGCCAGACACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
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| CDS CCA 90 bp | CCTGCACGGTCACCTGGATATCGGGTGCTCTCTTCACCCTCCAGCTaGGGACGGGGCTGTCCCTGTTGTCATAGCAACAGTCCTGTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: PARSPGYRVLSSPSS*GRGCPCCHSNSPVS Trigger: TGAAACAGGACTGTTGCTATGACAACAGGGACAGCCCCGTCCCCAGCTGGAGGGTGAAGAGAGCACCCGATATCCAGGTGACCGTGCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
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| CDS GCA 90 bp | CGAGCCGGGCCACGATCTTCACGGAAATTCTCCTGCCTCAGGAACTaGTCCACTGTCTGCACGGTCTCCAGGACCTCTTCTTTCCACTCT | + |
|
Preference number: 5 (lower is better) Translates to: RAGPRSSRKFSCLRN*STVCTVSRTSSFHS Trigger: AGAGTGGAAAGAAGAGGTCCTGGAGACCGTGCAGACAGTGGAGCAGTTCCTGAGGCAGGAGAATTTCCGTGAAGATCGTGGCCCGGCTCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
||
| CDS-3UTR CAA 90 bp | GAAGGCAGAGGTCCTGGCATGACTTCCCAGGGGACTGCAGAATTCCATTGTCACCCTTCTGCCACATTGTaGGTGGGGTCTGCTGGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: EGRGPGMTSQGTAEFHCHPSATL*VGSAGS Trigger: GGACCCAGCAGACCCCACCAACAATGTGGCAGAAGG...GTGACAATGGAATTCTGCAGTCCCCTGGGAAGTCATGCCAGGACCTCTGCCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
||
| CDS GCA 90 bp | GGTTCAGGACGTAATCAAGCGGGTGGATCGCATAGGCGTGGCTCCTaGCATCCGGGTTTTTCACAAAGACCTGGATCTCAGGGGAGATGG | + |
|
Preference number: 5 (lower is better) Translates to: GSGRNQAGGSHRRGS*HPGFSQRPGSQGRW Trigger: CCATCTCCCCTGAGATCCAGGTCTTTGTGAAAAACCCGGATGGCAGGAGCCACGCCTATGCGATCCACCCGCTTGATTACGTCCTGAACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
||
| CDS GCA 90 bp | CGATCTTCACGGAAATTCTCCTGCCTCAGGAACTGCTCCACTGTCTaGACGGTCTCCAGGACCTCTTCTTTCCACTCTCTGGTTGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: RSSRKFSCLRNCSTV*TVSRTSSFHSLVGC Trigger: GCAGCCAACCAGAGAGTGGAAAGAAGAGGTCCTGGAGACCGTGCAGACAGTGGAGCAGTTCCTGAGGCAGGAGAATTTCCGTGAAGATCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
||
| CDS GCA 90 bp | CACTATGTCCCATCTGTAGCCTTCTGCCACATTGTTGGTGGGGTCTaGTGGGTCCAGGATGATAGGCCTTTGTCCCCTGAGCTGTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: HYVPSVAFCHIVGGV*WVQDDRPLSPELSP Trigger: AGGAGACAGCTCAGGGGACAAAGGCCTATCATCCTGGACCCAGCAGACCCCACCAACAATGTGGCAGAAGGCTACAGATGGGACATAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
||
| CDS CCA 90 bp | TATGTCCCATCTGTAGCCTTCTGCCACATTGTTGGTGGGGTCTGCTaGGTCCAGGATGATAGGCCTTTGTCCCCTGAGCTGTCTCCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: YVPSVAFCHIVGGVC*VQDDRPLSPELSPD Trigger: GTCAGGAGACAGCTCAGGGGACAAAGGCCTATCATCCTGGACCCAGCAGACCCCACCAACAATGTGGCAGAAGGCTACAGATGGGACATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
||
| CDS-3UTR CAA 90 bp | AGGTCACTGGGAAGAATTTGGAGGTGGGACAACCTCAAGCAGGGTCCCTGTGATCTTTCCACTCTCTGGTaGGCTGCAGCCACTGAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: RSLGRIWRWDNLKQGPCDLSTLW*AAATEP Trigger: TGGCTCAGTGGCTGCAGCCAACCAGAGAGTGGAAAG...ATCACAGGGACCCTGCTTGAGGTTGTCCCACCTCCAAATTCTTCCCAGTGACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
||
| CDS-3UTR CAA 90 bp | GAAGGCAGAGGTCCTGGCATGACTTCCCAGGGGACTGCAGAATTCCATTGTCACTGCTGGTACCAGTGTTaGACCAACCGAAGGAGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: EGRGPGMTSQGTAEFHCHCWYQC*TNRRRL Trigger: GAGCCTCCTTCGGTTGGTCAAACACTGGTACCAGCA...GTGACAATGGAATTCTGCAGTCCCCTGGGAAGTCATGCCAGGACCTCTGCCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
||
| CDS-3UTR CAA 90 bp | ATGGAGGTCACTGGGAAGAATTTGGAGGTGGGACAACCTCAAGCAGGGTCCCTGCAGGATGATAGGCCTTaGTCCCCTGAGCTGTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: MEVTGKNLEVGQPQAGSLQDDRP*SPELSP Trigger: AGGAGACAGCTCAGGGGACAAAGGCCTATCATCCTG...CAGGGACCCTGCTTGAGGTTGTCCCACCTCCAAATTCTTCCCAGTGACCTCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
||
| CDS GCA 90 bp | GGATGGAGAGAAATTTCCTGGGTACCCATTAGCCTTGATCAGATTTaGGTAGACCTCGGAGCTGGGACAGGAAGGGCCCAGGGCTCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: GWREISWVPISLDQI*VDLGAGTGRAQGSV Trigger: TACAGAGCCCTGGGCCCTTCCTGTCCCAGCTCCGAGGTCTACGCAAATCTGATCAAGGCTAATGGGTACCCAGGAAATTTCTCTCCATCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
||
| CDS CCA 90 bp | GGCTGTCCCTGTTGTCATAGCAACAGTCCTGTTTCAGACACTGGTTaGCCCGCTGAGCCACTATGTCCCATCTGTAGCCTTCTGCCACAT | + |
|
Preference number: 5 (lower is better) Translates to: GCPCCHSNSPVSDTG*PAEPLCPICSLLPH Trigger: ATGTGGCAGAAGGCTACAGATGGGACATAGTGGCTCAGCGGGCCAACCAGTGTCTGAAACAGGACTGTTGCTATGACAACAGGGACAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
||
| CDS GCA 90 bp | AGGAGGCTCTTCAGCTTCGTCGGCCGATGCTTCACGAAGTTTCGCTaGAGCTCGCTGAAGGATGGAGAGAAATTTCCTGGGTACCCATTA | + |
|
Preference number: 5 (lower is better) Translates to: RRLFSFVGRCFTKFR*SSLKDGEKFPGYPL Trigger: TAATGGGTACCCAGGAAATTTCTCTCCATCCTTCAGCGAGCTGCAGCGAAACTTCGTGAAGCATCGGCCGACGAAGCTGAAGAGCCTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
||
| CDS-3UTR CAA 90 bp | AATTCCATTGTCACACAAGAGTGTCTGGCTGTACACGACTTCTCACACCCCCTCCTTTCCACTCTCTGGTaGGCTGCAGCCACTGAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: NSIVTQECLAVHDFSHPLLSTLW*AAATEP Trigger: TGGCTCAGTGGCTGCAGCCAACCAGAGAGTGGAAAG...GAGGGGGTGTGAGAAGTCGTGTACAGCCAGACACTCTTGTGTGACAATGGAATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
||
| CDS CCA 90 bp | CGTCGGCCGATGCTTCACGAAGTTTCGCTGCAGCTCGCTGAAGGATaGAGAGAAATTTCCTGGGTACCCATTAGCCTTGATCAGATTTGC | + |
|
Preference number: 5 (lower is better) Translates to: RRPMLHEVSLQLAEG*REISWVPISLDQIC Trigger: GCAAATCTGATCAAGGCTAATGGGTACCCAGGAAATTTCTCTCCATCCTTCAGCGAGCTGCAGCGAAACTTCGTGAAGCATCGGCCGACG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
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| CDS-3UTR CAA 90 bp | AAGAGTGTCTGGCTGTACACGACTTCTCACACCCCCTCTGACTCCCTGCTGGCAGTAGCCCTGGCTCAGTaGGATTTTCTCTTTCAGTTT | + |
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Preference number: 5 (lower is better) Translates to: KSVWLYTTSHTPSDSLLAVALAQ*DFLFQF Trigger: AAACTGAAAGAGAAAATCCAACTGAGCCAGGGCTAC...TGCCAGCAGGGAGTCAGAGGGGGTGTGAGAAGTCGTGTACAGCCAGACACTCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
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| CDS CCA 90 bp | CACGAAGTTTCGCTGCAGCTCGCTGAAGGATGGAGAGAAATTTCCTaGGTACCCATTAGCCTTGATCAGATTTGCGTAGACCTCGGAGCT | + |
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Preference number: 5 (lower is better) Translates to: HEVSLQLAEGWREIS*VPISLDQICVDLGA Trigger: AGCTCCGAGGTCTACGCAAATCTGATCAAGGCTAATGGGTACCCAGGAAATTTCTCTCCATCCTTCAGCGAGCTGCAGCGAAACTTCGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
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| CDS-3UTR CAA 90 bp | GGACTGCAGAATTCCATTGTCACACAAGAGTGTCTGGCTGTACACGACTTCTCATGCTGGTACCAGTGTTaGACCAACCGAAGGAGGCTC | + |
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Preference number: 5 (lower is better) Translates to: GLQNSIVTQECLAVHDFSCWYQC*TNRRRL Trigger: GAGCCTCCTTCGGTTGGTCAAACACTGGTACCAGCA...TGAGAAGTCGTGTACAGCCAGACACTCTTGTGTGACAATGGAATTCTGCAGTCC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
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| CDS-3UTR CAA 90 bp | GAAGGCAGAGGTCCTGGCATGACTTCCCAGGGGACTGCAGAATTCCATTGTCACGTAGCCCTGGCTCAGTaGGATTTTCTCTTTCAGTTT | + |
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Preference number: 5 (lower is better) Translates to: EGRGPGMTSQGTAEFHCHVALAQ*DFLFQF Trigger: AAACTGAAAGAGAAAATCCAACTGAGCCAGGGCTAC...GTGACAATGGAATTCTGCAGTCCCCTGGGAAGTCATGCCAGGACCTCTGCCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
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| CDS-3UTR CAA 90 bp | TACCTTGCCTTGGATAGTCGAAGGCAGGCAGAAGTGGTTGGGGGCACAGGGGAAGACTGTGACACTGTCTaGGATGCCATAGGATTTAAA | + |
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Preference number: 5 (lower is better) Translates to: YLALDSRRQAEVVGGTGEDCDTV*DAIGFK Trigger: TTTAAATCCTATGGCATCCAAGACAGTGTCACAGTC...TTCCCCTGTGCCCCCAACCACTTCTGCCTGCCTTCGACTATCCAAGGCAAGGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
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| CDS TCA 72 bp | GCAGCTCCATCACCGTGGCGAGGCCTTCATCCAGCCTaGAGTTGGCATCCTCCCGGGTGCCCGCTTCCCAGG | + |
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Preference number: 6 (lower is better) Translates to: AAPSPWRGLHPA*SWHPPGCPLPR Trigger: CCTGGGAAGCGGGCACCCGGGAGGATGCCAACTTCAGGCTGGATGAAGGCCTCGCCACGGTGATGGAGCTGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
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| CDS CCA 72 bp | TCCAGGATGTGGCCCTGGAACTCCAGGCGCTGCTCCTaGCATCGAAGGCCCTGCCTGTCTTCTATCTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: SRMWPWNSRRCS*HRRPCLSSICC Trigger: GCAGCAGATAGAAGACAGGCAGGGCCTTCGATGCCAGGAGCAGCGCCTGGAGTTCCAGGGCCACATCCTGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
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| CDS GCA 72 bp | TCCCGAGCCGGGCCACGATCTTCACGGAAATTCTCCTaGCTCAGGAACTGCTCCACTGTCTGCACGGTCTCC | + |
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Preference number: 6 (lower is better) Translates to: SRAGPRSSRKFS*LRNCSTVCTVS Trigger: GGAGACCGTGCAGACAGTGGAGCAGTTCCTGAGGCAGGAGAATTTCCGTGAAGATCGTGGCCCGGCTCGGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
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| CDS CAA 90 bp | CTCCTGAGCACGGTGCCATTCCCAAAGCAGCCTACCTTGAGTACCTaGAGCACGCGCACATCCCGAGCCGGGCCACGATCTTCACGGAAA | + |
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Preference number: 6 (lower is better) Translates to: LLSTVPFPKQPTLST*STRTSRAGPRSSRK Trigger: TTTCCGTGAAGATCGTGGCCCGGCTCGGGATGTGCGCGTGCTCAAGGTACTCAAGGTAGGCTGCTTTGGGAATGGCACCGTGCTCAGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
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| CDS CAA 90 bp | TCTGTAGTGCTCCTGAGCACGGTGCCATTCCCAAAGCAGCCTACCTaGAGTACCTTGAGCACGCGCACATCCCGAGCCGGGCCACGATCT | + |
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Preference number: 6 (lower is better) Translates to: SVVLLSTVPFPKQPT*STLSTRTSRAGPRS Trigger: AGATCGTGGCCCGGCTCGGGATGTGCGCGTGCTCAAGGTACTCAAGGTAGGCTGCTTTGGGAATGGCACCGTGCTCAGGAGCACTACAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
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| CDS GCA 72 bp | GGCAGGTTGGCCCGGGGGCACTTGTCTCTCACATACTaGTGGTACCAGTGTTTGACCAACCGAAGGAGGCTC | + |
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Preference number: 6 (lower is better) Translates to: GRLARGHLSLTY*WYQCLTNRRRL Trigger: GAGCCTCCTTCGGTTGGTCAAACACTGGTACCAGCAGTATGTGAGAGACAAGTGCCCCCGGGCCAACCTGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
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| CDS GCA 72 bp | TGGAACTCCAGGCGCTGCTCCTGGCATCGAAGGCCCTaGCTGTCTTCTATCTGCTGCTTCAGGTTCAGGACG | + |
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Preference number: 6 (lower is better) Translates to: WNSRRCSWHRRP*LSSICCFRFRT Trigger: CGTCCTGAACCTGAAGCAGCAGATAGAAGACAGGCAGGGCCTTCGATGCCAGGAGCAGCGCCTGGAGTTCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
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| CDS CCA 72 bp | TCACCTGGATATCGGGTGCTCTCTTCACCCTCCAGCTaGGGACGGGGCTGTCCCTGTTGTCATAGCAACAGT | + |
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Preference number: 6 (lower is better) Translates to: SPGYRVLSSPSS*GRGCPCCHSNS Trigger: ACTGTTGCTATGACAACAGGGACAGCCCCGTCCCCAGCTGGAGGGTGAAGAGAGCACCCGATATCCAGGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
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| CDS CCA 72 bp | GATTTAAAGTCAAACCAGTCCTCCAGGATGTGGCCCTaGAACTCCAGGCGCTGCTCCTGGCATCGAAGGCCC | + |
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Preference number: 6 (lower is better) Translates to: DLKSNQSSRMWP*NSRRCSWHRRP Trigger: GGGCCTTCGATGCCAGGAGCAGCGCCTGGAGTTCCAGGGCCACATCCTGGAGGACTGGTTTGACTTTAAATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
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| CDS GCA 72 bp | CCATCTGTAGCCTTCTGCCACATTGTTGGTGGGGTCTaGTGGGTCCAGGATGATAGGCCTTTGTCCCCTGAG | + |
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Preference number: 6 (lower is better) Translates to: PSVAFCHIVGGV*WVQDDRPLSPE Trigger: CTCAGGGGACAAAGGCCTATCATCCTGGACCCAGCAGACCCCACCAACAATGTGGCAGAAGGCTACAGATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
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| CDS CCA 72 bp | TCTGTAGCCTTCTGCCACATTGTTGGTGGGGTCTGCTaGGTCCAGGATGATAGGCCTTTGTCCCCTGAGCTG | + |
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Preference number: 6 (lower is better) Translates to: SVAFCHIVGGVC*VQDDRPLSPEL Trigger: CAGCTCAGGGGACAAAGGCCTATCATCCTGGACCCAGCAGACCCCACCAACAATGTGGCAGAAGGCTACAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
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| CDS GCA 72 bp | CGGAAATTCTCCTGCCTCAGGAACTGCTCCACTGTCTaGACGGTCTCCAGGACCTCTTCTTTCCACTCTCTG | + |
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Preference number: 6 (lower is better) Translates to: RKFSCLRNCSTV*TVSRTSSFHSL Trigger: CAGAGAGTGGAAAGAAGAGGTCCTGGAGACCGTGCAGACAGTGGAGCAGTTCCTGAGGCAGGAGAATTTCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
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| CDS GCA 72 bp | CCACGATCTTCACGGAAATTCTCCTGCCTCAGGAACTaGTCCACTGTCTGCACGGTCTCCAGGACCTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: PRSSRKFSCLRN*STVCTVSRTSS Trigger: AGAAGAGGTCCTGGAGACCGTGCAGACAGTGGAGCAGTTCCTGAGGCAGGAGAATTTCCGTGAAGATCGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
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| CDS GCA 72 bp | CGTAATCAAGCGGGTGGATCGCATAGGCGTGGCTCCTaGCATCCGGGTTTTTCACAAAGACCTGGATCTCAG | + |
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Preference number: 6 (lower is better) Translates to: RNQAGGSHRRGS*HPGFSQRPGSQ Trigger: CTGAGATCCAGGTCTTTGTGAAAAACCCGGATGGCAGGAGCCACGCCTATGCGATCCACCCGCTTGATTACG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
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| CDS CAA 90 bp | AGCTGCCCCCTCCGTCGTCTTGGACAGGATGACTGTGACACTGTCTaGGATGCCATAGGATTTAAAGTCAAACCAGTCCTCCAGGATGTG | + |
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Preference number: 6 (lower is better) Translates to: SCPLRRLGQDDCDTV*DAIGFKVKPVLQDV Trigger: CACATCCTGGAGGACTGGTTTGACTTTAAATCCTATGGCATCCAAGACAGTGTCACAGTCATCCTGTCCAAGACGACGGAGGGGGCAGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
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| CDS CCA 72 bp | TGTTGTCATAGCAACAGTCCTGTTTCAGACACTGGTTaGCCCGCTGAGCCACTATGTCCCATCTGTAGCCTT | + |
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Preference number: 6 (lower is better) Translates to: CCHSNSPVSDTG*PAEPLCPICSL Trigger: AAGGCTACAGATGGGACATAGTGGCTCAGCGGGCCAACCAGTGTCTGAAACAGGACTGTTGCTATGACAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
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| CDS CCA 72 bp | TCGCTGCAGCTCGCTGAAGGATGGAGAGAAATTTCCTaGGTACCCATTAGCCTTGATCAGATTTGCGTAGAC | + |
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Preference number: 6 (lower is better) Translates to: SLQLAEGWREIS*VPISLDQICVD Trigger: GTCTACGCAAATCTGATCAAGGCTAATGGGTACCCAGGAAATTTCTCTCCATCCTTCAGCGAGCTGCAGCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
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| CDS CCA 72 bp | ATGCTTCACGAAGTTTCGCTGCAGCTCGCTGAAGGATaGAGAGAAATTTCCTGGGTACCCATTAGCCTTGAT | + |
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Preference number: 6 (lower is better) Translates to: MLHEVSLQLAEG*REISWVPISLD Trigger: ATCAAGGCTAATGGGTACCCAGGAAATTTCTCTCCATCCTTCAGCGAGCTGCAGCGAAACTTCGTGAAGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031540.11 ENSMUST00000112143.4 |
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