Pregenerated sensors for OAS1H (Mus musculus)
Ensembl gene IDs: ENSMUSG00000001168Ensembl transcript IDs: ENSMUST00000072476.13, ENSMUST00000171820.3
Found 66 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGTGAGGAAGGCTGTCCATGGGCGGGCAGGCAGGGATCAGAAGCCTaGAGTCTGATCACAGGTTGGATACCCCTCGCTGGCTCCATGAGC | + |
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Preference number: 1 (lower is better) Translates to: CEEGCPWAGRQGSEA*SLITGWIPLAGSMS Trigger: GCTCATGGAGCCAGCGAGGGGTATCCAACCTGTGATCAGACTCCAGGCTTCTGATCCCTGCCTGCCCGCCCATGGACAGCCTTCCTCACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072476.13 ENSMUST00000171820.3 |
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| 3UTR CCA 90 bp | GATGATCAGCCACTATTGGACAGAACCTCCCAACAGGTGGACAGATaGAAGTCAAATCTCTGTCCATCACAGCCTGACTCCCAGAAAACA | + |
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Preference number: 1 (lower is better) Translates to: DDQPLLDRTSQQVDR*KSNLCPSQPDSQKT Trigger: TGTTTTCTGGGAGTCAGGCTGTGATGGACAGAGATTTGACTTCCATCTGTCCACCTGTTGGGAGGTTCTGTCCAATAGTGGCTGATCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072476.13 |
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| 3UTR CCA 90 bp | TTGTTGATGATGATCAGCCACTATTGGACAGAACCTCCCAACAGGTaGACAGATGGAAGTCAAATCTCTGTCCATCACAGCCTGACTCCC | + |
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Preference number: 1 (lower is better) Translates to: LLMMISHYWTEPPNR*TDGSQISVHHSLTP Trigger: GGGAGTCAGGCTGTGATGGACAGAGATTTGACTTCCATCTGTCCACCTGTTGGGAGGTTCTGTCCAATAGTGGCTGATCATCATCAACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072476.13 |
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| 3UTR CCA 90 bp | CATCTCATGGCTTGCTGTGGTTTGTTGATGATGATCAGCCACTATTaGACAGAACCTCCCAACAGGTGGACAGATGGAAGTCAAATCTCT | + |
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Preference number: 1 (lower is better) Translates to: HLMACCGLLMMISHY*TEPPNRWTDGSQIS Trigger: AGAGATTTGACTTCCATCTGTCCACCTGTTGGGAGGTTCTGTCCAATAGTGGCTGATCATCATCAACAAACCACAGCAAGCCATGAGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072476.13 |
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| 3UTR GCA 90 bp | AAAGTCCATGCAATTTTATTCTCCTGCACTGCCAGAAACCCAGCCTaGATGTTGCAGAAACAGTGCACCTCGATGATCACTAGACAGATT | + |
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Preference number: 1 (lower is better) Translates to: KVHAILFSCTARNPA*MLQKQCTSMITRQI Trigger: AATCTGTCTAGTGATCATCGAGGTGCACTGTTTCTGCAACATGCAGGCTGGGTTTCTGGCAGTGCAGGAGAATAAAATTGCATGGACTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072476.13 |
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| 3UTR GCA 90 bp | TCACAAACACATCAAAATTTCAAAGTCCATGCAATTTTATTCTCCTaGACTGCCAGAAACCCAGCCTGCATGTTGCAGAAACAGTGCACC | + |
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Preference number: 1 (lower is better) Translates to: SQTHQNFKVHAILFS*TARNPACMLQKQCT Trigger: GGTGCACTGTTTCTGCAACATGCAGGCTGGGTTTCTGGCAGTGCAGGAGAATAAAATTGCATGGACTTTGAAATTTTGATGTGTTTGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072476.13 |
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| 3UTR CAA 90 bp | GATGGATCCCTCAGAGTACACACCCATCTCATGGCTTGCTGTGGTTaGTTGATGATGATCAGCCACTATTGGACAGAACCTCCCAACAGG | + |
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Preference number: 2 (lower is better) Translates to: DGSLRVHTHLMACCG*LMMISHYWTEPPNR Trigger: CCTGTTGGGAGGTTCTGTCCAATAGTGGCTGATCATCATCAACAAACCACAGCAAGCCATGAGATGGGTGTGTACTCTGAGGGATCCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072476.13 |
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| 3UTR CAA 90 bp | CCATCTCATGGCTTGCTGTGGTTTGTTGATGATGATCAGCCACTATaGGACAGAACCTCCCAACAGGTGGACAGATGGAAGTCAAATCTC | + |
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Preference number: 2 (lower is better) Translates to: PSHGLLWFVDDDQPL*DRTSQQVDRWKSNL Trigger: GAGATTTGACTTCCATCTGTCCACCTGTTGGGAGGTTCTGTCCAATAGTGGCTGATCATCATCAACAAACCACAGCAAGCCATGAGATGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072476.13 |
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| 3UTR CAA 90 bp | CATGCAATTTTATTCTCCTGCACTGCCAGAAACCCAGCCTGCATGTaGCAGAAACAGTGCACCTCGATGATCACTAGACAGATTCCCATG | + |
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Preference number: 2 (lower is better) Translates to: HAILFSCTARNPACM*QKQCTSMITRQIPM Trigger: CATGGGAATCTGTCTAGTGATCATCGAGGTGCACTGTTTCTGCAACATGCAGGCTGGGTTTCTGGCAGTGCAGGAGAATAAAATTGCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072476.13 |
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| 3UTR CCA 72 bp | GGCTGTCCATGGGCGGGCAGGCAGGGATCAGAAGCCTaGAGTCTGATCACAGGTTGGATACCCCTCGCTGGC | + |
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Preference number: 3 (lower is better) Translates to: GCPWAGRQGSEA*SLITGWIPLAG Trigger: GCCAGCGAGGGGTATCCAACCTGTGATCAGACTCCAGGCTTCTGATCCCTGCCTGCCCGCCCATGGACAGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072476.13 ENSMUST00000171820.3 |
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| 3UTR CCA 72 bp | AGGCAGGGATCAGAAGCCTGGAGTCTGATCACAGGTTaGATACCCCTCGCTGGCTCCATGAGCACCATCCGG | + |
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Preference number: 3 (lower is better) Translates to: RQGSEAWSLITG*IPLAGSMSTIR Trigger: CCGGATGGTGCTCATGGAGCCAGCGAGGGGTATCCAACCTGTGATCAGACTCCAGGCTTCTGATCCCTGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072476.13 ENSMUST00000171820.3 |
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| 3UTR TCA 72 bp | CTCCGGGACATGTGCAGCTGTGGAAGAGTTTCTATGTaGGATGAGGATGGATCCCTCAGAGTACACACCCAT | + |
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Preference number: 3 (lower is better) Translates to: LRDMCSCGRVSM*DEDGSLRVHTH Trigger: ATGGGTGTGTACTCTGAGGGATCCATCCTCATCTCACATAGAAACTCTTCCACAGCTGCACATGTCCCGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072476.13 |
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| 3UTR GCA 72 bp | ACTGCCAGAAACCCAGCCTGCATGTTGCAGAAACAGTaGACCTCGATGATCACTAGACAGATTCCCATGGCT | + |
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Preference number: 3 (lower is better) Translates to: TARNPACMLQKQ*TSMITRQIPMA Trigger: AGCCATGGGAATCTGTCTAGTGATCATCGAGGTGCACTGTTTCTGCAACATGCAGGCTGGGTTTCTGGCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072476.13 |
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| 3UTR CCA 72 bp | CCACTATTGGACAGAACCTCCCAACAGGTGGACAGATaGAAGTCAAATCTCTGTCCATCACAGCCTGACTCC | + |
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Preference number: 3 (lower is better) Translates to: PLLDRTSQQVDR*KSNLCPSQPDS Trigger: GGAGTCAGGCTGTGATGGACAGAGATTTGACTTCCATCTGTCCACCTGTTGGGAGGTTCTGTCCAATAGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072476.13 |
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| 3UTR TCA 72 bp | GGACAGATGGAAGTCAAATCTCTGTCCATCACAGCCTaGCTCCCAGAAAACACTGTTAGAGGCTTAGGCAGA | + |
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Preference number: 3 (lower is better) Translates to: GQMEVKSLSITA*LPENTVRGLGR Trigger: TCTGCCTAAGCCTCTAACAGTGTTTTCTGGGAGTCAGGCTGTGATGGACAGAGATTTGACTTCCATCTGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072476.13 |
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| 3UTR TCA 72 bp | GGACATGTGCAGCTGTGGAAGAGTTTCTATGTGAGATaGGGATGGATCCCTCAGAGTACACACCCATCTCAT | + |
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Preference number: 3 (lower is better) Translates to: GHVQLWKSFYVR*GWIPQSTHPSH Trigger: ATGAGATGGGTGTGTACTCTGAGGGATCCATCCTCATCTCACATAGAAACTCTTCCACAGCTGCACATGTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072476.13 |
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| 3UTR CCA 72 bp | ATGATCAGCCACTATTGGACAGAACCTCCCAACAGGTaGACAGATGGAAGTCAAATCTCTGTCCATCACAGC | + |
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Preference number: 3 (lower is better) Translates to: MISHYWTEPPNR*TDGSQISVHHS Trigger: GCTGTGATGGACAGAGATTTGACTTCCATCTGTCCACCTGTTGGGAGGTTCTGTCCAATAGTGGCTGATCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072476.13 |
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| 3UTR CCA 72 bp | GCTTGCTGTGGTTTGTTGATGATGATCAGCCACTATTaGACAGAACCTCCCAACAGGTGGACAGATGGAAGT | + |
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Preference number: 3 (lower is better) Translates to: ACCGLLMMISHY*TEPPNRWTDGS Trigger: ACTTCCATCTGTCCACCTGTTGGGAGGTTCTGTCCAATAGTGGCTGATCATCATCAACAAACCACAGCAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072476.13 |
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| 3UTR CCA 72 bp | ATCCCTCAGAGTACACACCCATCTCATGGCTTGCTGTaGTTTGTTGATGATGATCAGCCACTATTGGACAGA | + |
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Preference number: 3 (lower is better) Translates to: IPQSTHPSHGLL*FVDDDQPLLDR Trigger: TCTGTCCAATAGTGGCTGATCATCATCAACAAACCACAGCAAGCCATGAGATGGGTGTGTACTCTGAGGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072476.13 |
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| 3UTR GCA 72 bp | AAATTTCAAAGTCCATGCAATTTTATTCTCCTGCACTaGCAGAAACCCAGCCTGCATGTTGCAGAAACAGTG | + |
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Preference number: 3 (lower is better) Translates to: KFQSPCNFILLH*QKPSLHVAETV Trigger: CACTGTTTCTGCAACATGCAGGCTGGGTTTCTGGCAGTGCAGGAGAATAAAATTGCATGGACTTTGAAATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072476.13 |
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| 3UTR CAA 72 bp | CAGGCAGGGATCAGAAGCCTGGAGTCTGATCACAGGTaGGATACCCCTCGCTGGCTCCATGAGCACCATCCG | + |
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Preference number: 4 (lower is better) Translates to: QAGIRSLESDHR*DTPRWLHEHHP Trigger: CGGATGGTGCTCATGGAGCCAGCGAGGGGTATCCAACCTGTGATCAGACTCCAGGCTTCTGATCCCTGCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072476.13 ENSMUST00000171820.3 |
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| CDS-3UTR TCA 90 bp | AAGCAGGCTGTGAGGAAGGCTGTCCATGGGCGGGCAGGCAGGGATCAGAAGCCTAAAGTTGGGCTGGTCTaGGCTCTGGACCTTAAACTT | + |
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Preference number: 4 (lower is better) Translates to: KQAVRKAVHGRAGRDQKPKVGLV*ALDLKL Trigger: AAGTTTAAGGTCCAGAGCTCAGACCAGCCCAACTTT...AGGCTTCTGATCCCTGCCTGCCCGCCCATGGACAGCCTTCCTCACAGCCTGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072476.13 ENSMUST00000171820.3 |
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| CDS-3UTR TCA 90 bp | GGCGGGCAGGCAGGGATCAGAAGCCTGGAGTCTGATCACAGGTTGGATACCCCTCACAGAAAGTCTTGCTaGAGCTCCATGAAGCAGATG | + |
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Preference number: 4 (lower is better) Translates to: GGQAGIRSLESDHRLDTPHRKSC*SSMKQM Trigger: CATCTGCTTCATGGAGCTTCAGCAAGACTTTCTGTG...AGGGGTATCCAACCTGTGATCAGACTCCAGGCTTCTGATCCCTGCCTGCCCGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072476.13 ENSMUST00000171820.3 |
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| CDS-3UTR CCA 90 bp | TGTGAGGAAGGCTGTCCATGGGCGGGCAGGCAGGGATCAGAAGCCTGGAGTCTGCCTGTTCTTAAAGCATaGGTAATCCAGCCAGGCTTT | + |
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Preference number: 4 (lower is better) Translates to: CEEGCPWAGRQGSEAWSLPVLKA*VIQPGF Trigger: AAAGCCTGGCTGGATTACCCATGCTTTAAGAACAGG...CAGACTCCAGGCTTCTGATCCCTGCCTGCCCGCCCATGGACAGCCTTCCTCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072476.13 |
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| CDS-3UTR CCA 90 bp | ACAGCAGAGGAGCACATGACCCTGACTCTGGAGTCTCCTTGGCAGATGCTTGGGGGCTGGTCTGAGCTCTaGACCTTAAACTTCTCTCTC | + |
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Preference number: 4 (lower is better) Translates to: TAEEHMTLTLESPWQMLGGWSEL*TLNFSL Trigger: GAGAGAGAAGTTTAAGGTCCAGAGCTCAGACCAGCC...CCCAAGCATCTGCCAAGGAGACTCCAGAGTCAGGGTCATGTGCTCCTCTGCTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072476.13 ENSMUST00000171820.3 |
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| CDS-3UTR CCA 90 bp | GGCGGGCAGGCAGGGATCAGAAGCCTGGAGTCTGATCACAGGTTGGATACCCCTTGTTTCATGTTTGTCTaGAAGCTCATGTTCCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: GGQAGIRSLESDHRLDTPCFMFV*KLMFPG Trigger: GCCTGGGAACATGAGCTTCCAGACAAACATGAAACA...AGGGGTATCCAACCTGTGATCAGACTCCAGGCTTCTGATCCCTGCCTGCCCGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072476.13 |
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| CDS-3UTR TCA 90 bp | GCAGGGATCAGAAGCCTGGAGTCTGATCACAGGTTGGATACCCCTCGCTGGCTCTGGCACAGGTGTTTCTaGATTTCCTCAATGACCTCT | + |
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Preference number: 4 (lower is better) Translates to: AGIRSLESDHRLDTPRWLWHRCF*ISSMTS Trigger: AGAGGTCATTGAGGAAATTCAGAAACACCTGTGCCA...GAGCCAGCGAGGGGTATCCAACCTGTGATCAGACTCCAGGCTTCTGATCCCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072476.13 ENSMUST00000171820.3 |
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| CDS-3UTR TCA 90 bp | ATGGGCGGGCAGGCAGGGATCAGAAGCCTGGAGTCTGATCACAGGTTGGATACCAGTACAGGTAGGCATTaGCCTGTTCATGTAGAACGT | + |
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Preference number: 4 (lower is better) Translates to: MGGQAGIRSLESDHRLDTSTGRH*PVHVER Trigger: ACGTTCTACATGAACAGGTCAATGCCTACCTGTACT...GGTATCCAACCTGTGATCAGACTCCAGGCTTCTGATCCCTGCCTGCCCGCCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072476.13 |
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| CDS-3UTR GCA 90 bp | CCCCTCGCTGGCTCCATGAGCACCATCCGGTCCTCTCTAGGTCAAAGTCTTACACTCAGTCGTTTTTCTTaGTGGAACTGGCACAGGTGT | + |
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Preference number: 4 (lower is better) Translates to: PLAGSMSTIRSSLGQSLTLSRFS*WNWHRC Trigger: ACACCTGTGCCAGTTCCAGCAAGAAAAACGACTGAG...TGTAAGACTTTGACCTAGAGAGGACCGGATGGTGCTCATGGAGCCAGCGAGGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072476.13 ENSMUST00000171820.3 |
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| CDS-3UTR GCA 90 bp | CTCCTGCACTGCCAGAAACCCAGCCTGCATGTTGCAGAAACAGTGCACCTCGATATCCAGCCAGGCTTTTaGCTCTTCTGCCAGTATGCA | + |
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Preference number: 4 (lower is better) Translates to: LLHCQKPSLHVAETVHLDIQPGF*LFCQYA Trigger: TGCATACTGGCAGAAGAGGCAAAAGCCTGGCTGGAT...ATCGAGGTGCACTGTTTCTGCAACATGCAGGCTGGGTTTCTGGCAGTGCAGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072476.13 |
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| CDS-3UTR TCA 90 bp | CGCTGGCTCCATGAGCACCATCCGGTCCTCTCTAGGTCAAAGTCTTACAGCAGACACAGAAAGTCTTGCTaGAGCTCCATGAAGCAGATG | + |
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Preference number: 4 (lower is better) Translates to: RWLHEHHPVLSRSKSYSRHRKSC*SSMKQM Trigger: CATCTGCTTCATGGAGCTTCAGCAAGACTTTCTGTG...TCTGCTGTAAGACTTTGACCTAGAGAGGACCGGATGGTGCTCATGGAGCCAGCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072476.13 ENSMUST00000171820.3 |
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| CDS-3UTR CCA 90 bp | TCAAAGTCTTACAGCAGAGGAGCACATGACCCTGACTCTGGAGTCTCCTTGGCAGGCTGGTCTGAGCTCTaGACCTTAAACTTCTCTCTC | + |
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Preference number: 4 (lower is better) Translates to: SKSYSRGAHDPDSGVSLAGWSEL*TLNFSL Trigger: GAGAGAGAAGTTTAAGGTCCAGAGCTCAGACCAGCC...TGCCAAGGAGACTCCAGAGTCAGGGTCATGTGCTCCTCTGCTGTAAGACTTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072476.13 ENSMUST00000171820.3 |
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| CDS-3UTR TCA 90 bp | TCAAAGTCTTACAGCAGAGGAGCACATGACCCTGACTCTGGAGTCTCCTTGGCACCTCTTTCTGTAGCTTaGACTGATCGTCAAAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: SKSYSRGAHDPDSGVSLAPLSVA*TDRQSR Trigger: CCTGCTTTGACGATCAGTTCAAGCTACAGAAAGAGG...TGCCAAGGAGACTCCAGAGTCAGGGTCATGTGCTCCTCTGCTGTAAGACTTTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072476.13 ENSMUST00000171820.3 |
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| CDS-3UTR TCA 90 bp | GAGCACCATCCGGTCCTCTCTAGGTCAAAGTCTTACAGCAGAGGAGCACATGACTTTTTGTCTGGCAGTTaGTACCAGTGCTTGACCAGA | + |
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Preference number: 4 (lower is better) Translates to: EHHPVLSRSKSYSRGAHDFLSGS*YQCLTR Trigger: TCTGGTCAAGCACTGGTATCAACTGCCAGACAAAAA...GTCATGTGCTCCTCTGCTGTAAGACTTTGACCTAGAGAGGACCGGATGGTGCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171820.3 |
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| CDS-3UTR GCA 90 bp | ATGAGCACCATCCGGTCCTCTCTAGGTCAAAGTCTTACAGCAGAGGAGCACATGCTCAGTCGTTTTTCTTaGTGGAACTGGCACAGGTGT | + |
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Preference number: 4 (lower is better) Translates to: MSTIRSSLGQSLTAEEHMLSRFS*WNWHRC Trigger: ACACCTGTGCCAGTTCCAGCAAGAAAAACGACTGAG...CATGTGCTCCTCTGCTGTAAGACTTTGACCTAGAGAGGACCGGATGGTGCTCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072476.13 ENSMUST00000171820.3 |
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| 3UTR CAA 72 bp | GGCTTGCTGTGGTTTGTTGATGATGATCAGCCACTATaGGACAGAACCTCCCAACAGGTGGACAGATGGAAG | + |
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Preference number: 4 (lower is better) Translates to: GLLWFVDDDQPL*DRTSQQVDRWK Trigger: CTTCCATCTGTCCACCTGTTGGGAGGTTCTGTCCAATAGTGGCTGATCATCATCAACAAACCACAGCAAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072476.13 |
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| 3UTR CAA 72 bp | TTATTCTCCTGCACTGCCAGAAACCCAGCCTGCATGTaGCAGAAACAGTGCACCTCGATGATCACTAGACAG | + |
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Preference number: 4 (lower is better) Translates to: LFSCTARNPACM*QKQCTSMITRQ Trigger: CTGTCTAGTGATCATCGAGGTGCACTGTTTCTGCAACATGCAGGCTGGGTTTCTGGCAGTGCAGGAGAATAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072476.13 |
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| CDS-3UTR GCA 90 bp | AGATGGAAGTCAAATCTCTGTCCATCACAGCCTGACTCCCAGAAAACACTGTTAGGCTTTTGCCTCTTCTaGCAGTATGCACCAGCCCTG | + |
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Preference number: 4 (lower is better) Translates to: RWKSNLCPSQPDSQKTLLGFCLF*QYAPAL Trigger: CAGGGCTGGTGCATACTGGCAGAAGAGGCAAAAGCC...TAACAGTGTTTTCTGGGAGTCAGGCTGTGATGGACAGAGATTTGACTTCCATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072476.13 |
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| CDS-3UTR TCA 90 bp | TCTCTAGGTCAAAGTCTTACAGCAGAGGAGCACATGACCCTGACTCTGGAGTCTTGGCACAGGTGTTTCTaGATTTCCTCAATGACCTCT | + |
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Preference number: 4 (lower is better) Translates to: SLGQSLTAEEHMTLTLESWHRCF*ISSMTS Trigger: AGAGGTCATTGAGGAAATTCAGAAACACCTGTGCCA...AGACTCCAGAGTCAGGGTCATGTGCTCCTCTGCTGTAAGACTTTGACCTAGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072476.13 ENSMUST00000171820.3 |
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| CDS-3UTR TCA 90 bp | CTCATGGCTTGCTGTGGTTTGTTGATGATGATCAGCCACTATTGGACAGAACCTCCTCTTTCTGTAGCTTaGACTGATCGTCAAAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: LMACCGLLMMISHYWTEPPLSVA*TDRQSR Trigger: CCTGCTTTGACGATCAGTTCAAGCTACAGAAAGAGG...AGGTTCTGTCCAATAGTGGCTGATCATCATCAACAAACCACAGCAAGCCATGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072476.13 |
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| CDS-3UTR CAA 90 bp | GCGGGCAGGCAGGGATCAGAAGCCTGGAGTCTGATCACAGGTTGGATACCCCTCAGGGTGGGCGGCACCTaGGAAGCATCTCTCCTTCAG | + |
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Preference number: 5 (lower is better) Translates to: AGRQGSEAWSLITGWIPLRVGGT*EASLLQ Trigger: CTGAAGGAGAGATGCTTCCAAGGTGCCGCCCACCCT...GAGGGGTATCCAACCTGTGATCAGACTCCAGGCTTCTGATCCCTGCCTGCCCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072476.13 ENSMUST00000171820.3 |
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| CDS-3UTR CAA 90 bp | AGCAGAGGAGCACATGACCCTGACTCTGGAGTCTCCTTGGCAGATGCTTGGGTGCTCACGGACCTAAAGTaGGGCTGGTCTGAGCTCTGG | + |
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Preference number: 5 (lower is better) Translates to: SRGAHDPDSGVSLADAWVLTDLK*GWSELW Trigger: CCAGAGCTCAGACCAGCCCAACTTTAGGTCCGTGAG...CACCCAAGCATCTGCCAAGGAGACTCCAGAGTCAGGGTCATGTGCTCCTCTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072476.13 ENSMUST00000171820.3 |
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| CDS-3UTR CAA 90 bp | ACAGCAGAGGAGCACATGACCCTGACTCTGGAGTCTCCTTGGCAGATGCTTGGGCTCACGGACCTAAAGTaGGGCTGGTCTGAGCTCTGG | + |
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Preference number: 5 (lower is better) Translates to: TAEEHMTLTLESPWQMLGLTDLK*GWSELW Trigger: CCAGAGCTCAGACCAGCCCAACTTTAGGTCCGTGAG...CCCAAGCATCTGCCAAGGAGACTCCAGAGTCAGGGTCATGTGCTCCTCTGCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072476.13 ENSMUST00000171820.3 |
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| CDS-3UTR CAA 90 bp | GGCAGGCAGGGATCAGAAGCCTGGAGTCTGATCACAGGTTGGATACCCCTCGCTTCCATGAAGCAGATGTaGAACTCGCCCTCCTTGCCC | + |
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Preference number: 5 (lower is better) Translates to: GRQGSEAWSLITGWIPLASMKQM*NSPSLP Trigger: GGGCAAGGAGGGCGAGTTCAACATCTGCTTCATGGA...AGCGAGGGGTATCCAACCTGTGATCAGACTCCAGGCTTCTGATCCCTGCCTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072476.13 ENSMUST00000171820.3 |
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| CDS-3UTR CAA 90 bp | GCGGGCAGGCAGGGATCAGAAGCCTGGAGTCTGATCACAGGTTGGATACCCCTCAATCCAGCCAGGCTTTaGCCTCTTCTGCCAGTATGC | + |
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Preference number: 5 (lower is better) Translates to: AGRQGSEAWSLITGWIPLNPARL*PLLPVC Trigger: GCATACTGGCAGAAGAGGCAAAAGCCTGGCTGGATT...GAGGGGTATCCAACCTGTGATCAGACTCCAGGCTTCTGATCCCTGCCTGCCCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072476.13 |
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| CDS-3UTR CAA 90 bp | CTCCATGAGCACCATCCGGTCCTCTCTAGGTCAAAGTCTTACAGCAGAGGAGCAAGGGTGGGCGGCACCTaGGAAGCATCTCTCCTTCAG | + |
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Preference number: 5 (lower is better) Translates to: LHEHHPVLSRSKSYSRGARVGGT*EASLLQ Trigger: CTGAAGGAGAGATGCTTCCAAGGTGCCGCCCACCCT...TGCTCCTCTGCTGTAAGACTTTGACCTAGAGAGGACCGGATGGTGCTCATGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072476.13 ENSMUST00000171820.3 |
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| CDS-3UTR CAA 90 bp | ATGGGCGGGCAGGCAGGGATCAGAAGCCTGGAGTCTGATCACAGGTTGGATACCACCTCTGACCTGCCCTaGAGCACAGTGTATCGATTG | + |
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Preference number: 5 (lower is better) Translates to: MGGQAGIRSLESDHRLDTTSDLP*STVYRL Trigger: CAATCGATACACTGTGCTCAAGGGCAGGTCAGAGGT...GGTATCCAACCTGTGATCAGACTCCAGGCTTCTGATCCCTGCCTGCCCGCCCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072476.13 ENSMUST00000171820.3 |
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| CDS-3UTR CAA 90 bp | AGCAGAGGAGCACATGACCCTGACTCTGGAGTCTCCTTGGCAGATGCTTGGGTGTCCATGAAGCAGATGTaGAACTCGCCCTCCTTGCCC | + |
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Preference number: 5 (lower is better) Translates to: SRGAHDPDSGVSLADAWVSMKQM*NSPSLP Trigger: GGGCAAGGAGGGCGAGTTCAACATCTGCTTCATGGA...CACCCAAGCATCTGCCAAGGAGACTCCAGAGTCAGGGTCATGTGCTCCTCTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072476.13 ENSMUST00000171820.3 |
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| CDS-3UTR CAA 90 bp | AAGCAGGCTGTGAGGAAGGCTGTCCATGGGCGGGCAGGCAGGGATCAGAAGCCTAAGACAAATCCTTTTTaGTCTGGCGGCACATCCCAG | + |
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Preference number: 5 (lower is better) Translates to: KQAVRKAVHGRAGRDQKPKTNPF*SGGTSQ Trigger: CTGGGATGTGCCGCCAGACAAAAAAGGATTTGTCTT...AGGCTTCTGATCCCTGCCTGCCCGCCCATGGACAGCCTTCCTCACAGCCTGCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072476.13 |
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| CDS CCA 90 bp | CCACCCATCACAACCCTGGAGACCCTCATAGGGTGGGCGGCACCTTaGAAGCATCTCTCCTTCAGGAAAGCACTTATGGAGTTCACGTCT | + |
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Preference number: 5 (lower is better) Translates to: PPITTLETLIGWAAP*KHLSFRKALMEFTS Trigger: AGACGTGAACTCCATAAGTGCTTTCCTGAAGGAGAGATGCTTCCAAGGTGCCGCCCACCCTATGAGGGTCTCCAGGGTTGTGATGGGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072476.13 ENSMUST00000171820.3 |
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| CDS-3UTR CAA 90 bp | AAGCAGGCTGTGAGGAAGGCTGTCCATGGGCGGGCAGGCAGGGATCAGAAGCCTTTTCCACAGAAAGTCTaGCTGAAGCTCCATGAAGCA | + |
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Preference number: 5 (lower is better) Translates to: KQAVRKAVHGRAGRDQKPFPQKV*LKLHEA Trigger: TGCTTCATGGAGCTTCAGCAAGACTTTCTGTGGAAA...AGGCTTCTGATCCCTGCCTGCCCGCCCATGGACAGCCTTCCTCACAGCCTGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072476.13 ENSMUST00000171820.3 |
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| CDS-3UTR CAA 90 bp | CCTCGCTGGCTCCATGAGCACCATCCGGTCCTCTCTAGGTCAAAGTCTTACAGCTCTCAGTCGTTTTTCTaGCTGGAACTGGCACAGGTG | + |
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Preference number: 5 (lower is better) Translates to: PRWLHEHHPVLSRSKSYSSQSFF*LELAQV Trigger: CACCTGTGCCAGTTCCAGCAAGAAAAACGACTGAGA...GCTGTAAGACTTTGACCTAGAGAGGACCGGATGGTGCTCATGGAGCCAGCGAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072476.13 ENSMUST00000171820.3 |
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| CDS CCA 90 bp | CACATCCCAGGAGCTCACTCGGGAACCATCCCTGTTCTTAAAGCATaGGTAATCCAGCCAGGCTTTTGCCTCTTCTGCCAGTATGCACCA | + |
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Preference number: 5 (lower is better) Translates to: HIPGAHSGTIPVLKA*VIQPGFCLFCQYAP Trigger: TGGTGCATACTGGCAGAAGAGGCAAAAGCCTGGCTGGATTACCCATGCTTTAAGAACAGGGATGGTTCCCGAGTGAGCTCCTGGGATGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072476.13 |
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| CDS TCA 90 bp | ATGAGGTTCTTCAGCTCGCATGGACGTTTCCACAGAAAGTCTTGCTaGAGCTCCATGAAGCAGATGTTGAACTCGCCCTCCTTGCCCAGC | + |
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Preference number: 5 (lower is better) Translates to: MRFFSSHGRFHRKSC*SSMKQMLNSPSLPS Trigger: GCTGGGCAAGGAGGGCGAGTTCAACATCTGCTTCATGGAGCTTCAGCAAGACTTTCTGTGGAAACGTCCATGCGAGCTGAAGAACCTCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072476.13 ENSMUST00000171820.3 |
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| CDS-3UTR CAA 90 bp | GATGATCAGCCACTATTGGACAGAACCTCCCAACAGGTGGACAGATGGAAGTCAACCTCTGACCTGCCCTaGAGCACAGTGTATCGATTG | + |
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Preference number: 5 (lower is better) Translates to: DDQPLLDRTSQQVDRWKSTSDLP*STVYRL Trigger: CAATCGATACACTGTGCTCAAGGGCAGGTCAGAGGT...TGACTTCCATCTGTCCACCTGTTGGGAGGTTCTGTCCAATAGTGGCTGATCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072476.13 |
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| CDS-3UTR CAA 90 bp | CTCATGGCTTGCTGTGGTTTGTTGATGATGATCAGCCACTATTGGACAGAACCTCAGCCACGTTCCATGTaGGGTCTGCTGGGTCCAAGA | + |
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Preference number: 5 (lower is better) Translates to: LMACCGLLMMISHYWTEPQPRSM*GLLGPR Trigger: TCTTGGACCCAGCAGACCCAACATGGAACGTGGCTG...AGGTTCTGTCCAATAGTGGCTGATCATCATCAACAAACCACAGCAAGCCATGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072476.13 |
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| CDS TCA 90 bp | GGGGTAGCTCAGTTTGAAGCTCACGGACCTAAAGTTGGGCTGGTCTaGGCTCTGGACCTTAAACTTCTCTCTCAGTCGTTTTTCTTGCTG | + |
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Preference number: 5 (lower is better) Translates to: GVAQFEAHGPKVGLV*ALDLKLLSQSFFLL Trigger: CAGCAAGAAAAACGACTGAGAGAGAAGTTTAAGGTCCAGAGCTCAGACCAGCCCAACTTTAGGTCCGTGAGCTTCAAACTGAGCTACCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072476.13 ENSMUST00000171820.3 |
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| CDS-3UTR CAA 90 bp | TCTCTAGGTCAAAGTCTTACAGCAGAGGAGCACATGACCCTGACTCTGGAGTCTTTTCCACAGAAAGTCTaGCTGAAGCTCCATGAAGCA | + |
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Preference number: 5 (lower is better) Translates to: SLGQSLTAEEHMTLTLESFPQKV*LKLHEA Trigger: TGCTTCATGGAGCTTCAGCAAGACTTTCTGTGGAAA...AGACTCCAGAGTCAGGGTCATGTGCTCCTCTGCTGTAAGACTTTGACCTAGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072476.13 ENSMUST00000171820.3 |
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| CDS CCA 72 bp | GAACCACCCATCACAACCCTGGAGACCCTCATAGGGTaGGCGGCACCTTGGAAGCATCTCTCCTTCAGGAAA | + |
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Preference number: 6 (lower is better) Translates to: EPPITTLETLIG*AAPWKHLSFRK Trigger: TTTCCTGAAGGAGAGATGCTTCCAAGGTGCCGCCCACCCTATGAGGGTCTCCAGGGTTGTGATGGGTGGTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072476.13 ENSMUST00000171820.3 |
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| CDS CAA 90 bp | ACCACCCATCACAACCCTGGAGACCCTCATAGGGTGGGCGGCACCTaGGAAGCATCTCTCCTTCAGGAAAGCACTTATGGAGTTCACGTC | + |
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Preference number: 6 (lower is better) Translates to: TTHHNPGDPHRVGGT*EASLLQESTYGVHV Trigger: GACGTGAACTCCATAAGTGCTTTCCTGAAGGAGAGATGCTTCCAAGGTGCCGCCCACCCTATGAGGGTCTCCAGGGTTGTGATGGGTGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072476.13 ENSMUST00000171820.3 |
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| CDS CAA 72 bp | CACAACCCTGGAGACCCTCATAGGGTGGGCGGCACCTaGGAAGCATCTCTCCTTCAGGAAAGCACTTATGGA | + |
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Preference number: 6 (lower is better) Translates to: HNPGDPHRVGGT*EASLLQESTYG Trigger: TCCATAAGTGCTTTCCTGAAGGAGAGATGCTTCCAAGGTGCCGCCCACCCTATGAGGGTCTCCAGGGTTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072476.13 ENSMUST00000171820.3 |
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| CDS CCA 72 bp | GGAGCTCACTCGGGAACCATCCCTGTTCTTAAAGCATaGGTAATCCAGCCAGGCTTTTGCCTCTTCTGCCAG | + |
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Preference number: 6 (lower is better) Translates to: GAHSGTIPVLKA*VIQPGFCLFCQ Trigger: CTGGCAGAAGAGGCAAAAGCCTGGCTGGATTACCCATGCTTTAAGAACAGGGATGGTTCCCGAGTGAGCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072476.13 |
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| CDS CCA 72 bp | CCGGAAACCCCGAGCTGTCTGTGTTTCATGTTTGTCTaGAAGCTCATGTTCCCAGGCATAGACAGTGAGCAG | + |
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Preference number: 6 (lower is better) Translates to: PETPSCLCFMFV*KLMFPGIDSEQ Trigger: CTGCTCACTGTCTATGCCTGGGAACATGAGCTTCCAGACAAACATGAAACACAGACAGCTCGGGGTTTCCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072476.13 |
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| CDS TCA 72 bp | TTCAGCTCGCATGGACGTTTCCACAGAAAGTCTTGCTaGAGCTCCATGAAGCAGATGTTGAACTCGCCCTCC | + |
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Preference number: 6 (lower is better) Translates to: FSSHGRFHRKSC*SSMKQMLNSPS Trigger: GGAGGGCGAGTTCAACATCTGCTTCATGGAGCTTCAGCAAGACTTTCTGTGGAAACGTCCATGCGAGCTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072476.13 ENSMUST00000171820.3 |
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| CDS CAA 72 bp | TGGAGGCAGCGGCTCCCTCAGCTTCTCCTTACACAGTaGATACCAGTGCTTGACCAGACAAATGAGGTTCTT | + |
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Preference number: 6 (lower is better) Translates to: WRQRLPQLLLTQ*IPVLDQTNEVL Trigger: AAGAACCTCATTTGTCTGGTCAAGCACTGGTATCAACTGTGTAAGGAGAAGCTGAGGGAGCCGCTGCCTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072476.13 |
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| CDS CCA 72 bp | GTGCTTGACCAGACAAATGAGGTTCTTCAGCTCGCATaGACGTTTCCACAGAAAGTCTTGCTGAAGCTCCAT | + |
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Preference number: 6 (lower is better) Translates to: VLDQTNEVLQLA*TFPQKVLLKLH Trigger: ATGGAGCTTCAGCAAGACTTTCTGTGGAAACGTCCATGCGAGCTGAAGAACCTCATTTGTCTGGTCAAGCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072476.13 ENSMUST00000171820.3 |
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