Pregenerated sensors for OAS1E (Mus musculus)
Ensembl gene IDs: ENSMUSG00000066867Ensembl transcript IDs: ENSMUST00000100785.7, ENSMUST00000200786.2, ENSMUST00000201172.2
Found 100 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGTCTGAGGACTCCCTCAGAGTGCACCCTCCCCCATGGCTTGCTGTaGTTTGATGATGACGATCAGCCACTATTGGACAGAACCTCCCAA | + |
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Preference number: 1 (lower is better) Translates to: GLRTPSECTLPHGLL*FDDDDQPLLDRTSQ Trigger: TTGGGAGGTTCTGTCCAATAGTGGCTGATCGTCATCATCAAATCACAGCAAGCCATGGGGGAGGGTGCACTCTGAGGGAGTCCTCAGACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100785.7 |
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| 3UTR CCA 90 bp | AAACCCGGCCTGCATGTTGTAGAAACAGTGCACCTTGATGAACACTaGCCAGATTCCCAGGGTGCCAGGGCCACATGCACTGCTGAAAAG | + |
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Preference number: 1 (lower is better) Translates to: KPGLHVVETVHLDEH*PDSQGARATCTAEK Trigger: CTTTTCAGCAGTGCATGTGGCCCTGGCACCCTGGGAATCTGGCCAGTGTTCATCAAGGTGCACTGTTTCTACAACATGCAGGCCGGGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100785.7 ENSMUST00000201172.2 |
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| 3UTR TCA 90 bp | AGTCATAAAACCATGTCCAGTAGATTAGAAGGCATTTGTACTTGGTaGCCAGTTCTAAGACCGTTCGGAAGCACTGGGCTGCATGGAGTC | + |
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Preference number: 1 (lower is better) Translates to: SHKTMSSRLEGICTW*PVLRPFGSTGLHGV Trigger: GACTCCATGCAGCCCAGTGCTTCCGAACGGTCTTAGAACTGGTCACCAAGTACAAATGCCTTCTAATCTACTGGACATGGTTTTATGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200786.2 |
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| 3UTR-3UTR CCA 90 bp | CCTCAGAGTGCACCCTCCCCCATGGCTTGCTGTGATTTGATGATGACGATCAGCGAGGAAGGCTATCCATaGGCAGGCAGGGATCAGAAG | + |
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Preference number: 2 (lower is better) Translates to: PQSAPSPMACCDLMMTISEEGYP*AGRDQK Trigger: CTTCTGATCCCTGCCTGCCCATGGATAGCCTTCCTC...GCTGATCGTCATCATCAAATCACAGCAAGCCATGGGGGAGGGTGCACTCTGAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100785.7 |
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| 3UTR-3UTR TCA 90 bp | CCAGATTCCCAGGGTGCCAGGGCCACATGCACTGCTGAAAAGTTTCTGTGTGGTCTGTCCATCACAGCCTaGCTCCCAGAGAACACTGTT | + |
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Preference number: 2 (lower is better) Translates to: PDSQGARATCTAEKFLCGLSITA*LPENTV Trigger: AACAGTGTTCTCTGGGAGTCAGGCTGTGATGGACAG...ACCACACAGAAACTTTTCAGCAGTGCATGTGGCCCTGGCACCCTGGGAATCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100785.7 |
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| 3UTR-3UTR CCA 90 bp | AATTTGAATGTATCCAGGTCTGAGCCTCCTTTGCCAGCAGGTCCCATGCCTGTAAGCCACGTTCCTTGTTaGGTCTGCCGGATCCAGGAT | + |
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Preference number: 2 (lower is better) Translates to: NLNVSRSEPPLPAGPMPVSHVPC*VCRIQD Trigger: ATCCTGGATCCGGCAGACCCAACAAGGAACGTGGCT...TACAGGCATGGGACCTGCTGGCAAAGGAGGCTCAGACCTGGATACATTCAAATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200786.2 |
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| 3UTR-3UTR CCA 90 bp | AATTTGAATGTATCCAGGTCTGAGCCTCCTTTGCCAGCAGGTCCCATGCCTGTAAGTCCAAAGCTGTCTTaGACCCCAAATTCCCAGACG | + |
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Preference number: 2 (lower is better) Translates to: NLNVSRSEPPLPAGPMPVSPKLS*TPNSQT Trigger: CGTCTGGGAATTTGGGGTCCAAGACAGCTTTGGACT...TACAGGCATGGGACCTGCTGGCAAAGGAGGCTCAGACCTGGATACATTCAAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200786.2 |
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| 3UTR-3UTR TCA 90 bp | AATTTGAATGTATCCAGGTCTGAGCCTCCTTTGCCAGCAGGTCCCATGCCTGTATTCTCCTTACACAGTTaGTACCAGTGCTTGACCAGA | + |
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Preference number: 2 (lower is better) Translates to: NLNVSRSEPPLPAGPMPVFSLHS*YQCLTR Trigger: TCTGGTCAAGCACTGGTATCAACTGTGTAAGGAGAA...TACAGGCATGGGACCTGCTGGCAAAGGAGGCTCAGACCTGGATACATTCAAATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200786.2 |
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| 3UTR TCA 72 bp | GGGCCACATGCACTGCTGAAAAGTTTCTGTGTGGTCTaGGGACTCCCTCAGAGTGCACCCTCCCCCATGGCT | + |
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Preference number: 3 (lower is better) Translates to: GPHALLKSFCVV*GLPQSAPSPMA Trigger: AGCCATGGGGGAGGGTGCACTCTGAGGGAGTCCTCAGACCACACAGAAACTTTTCAGCAGTGCATGTGGCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000100785.7 ENSMUST00000201172.2 |
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| 3UTR TCA 72 bp | GCCAGATTCCCAGGGTGCCAGGGCCACATGCACTGCTaGAAAGTTTCTGTGTGGTCTGAGGACTCCCTCAGA | + |
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Preference number: 3 (lower is better) Translates to: ARFPGCQGHMHC*KVSVWSEDSLR Trigger: TCTGAGGGAGTCCTCAGACCACACAGAAACTTTTCAGCAGTGCATGTGGCCCTGGCACCCTGGGAATCTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100785.7 ENSMUST00000201172.2 |
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| 3UTR CCA 72 bp | GGAAGGCTATCCATGGGCAGGCAGGGATCAGAAGCCTaGAGTCTAATCACAGGTTGGATACCCCTCGCTGGA | + |
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Preference number: 3 (lower is better) Translates to: GRLSMGRQGSEA*SLITGWIPLAG Trigger: TCCAGCGAGGGGTATCCAACCTGTGATTAGACTCCAGGCTTCTGATCCCTGCCTGCCCATGGATAGCCTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100785.7 |
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| 3UTR GCA 72 bp | GAACCTCCCAACAGGTGGACAGATGGAAGTCGAGCTTaGGTTCTTCTCTGTCCATCACAGCCTGACTCCCAG | + |
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Preference number: 3 (lower is better) Translates to: EPPNRWTDGSRA*VLLCPSQPDSQ Trigger: CTGGGAGTCAGGCTGTGATGGACAGAGAAGAACGCAAGCTCGACTTCCATCTGTCCACCTGTTGGGAGGTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100785.7 |
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| 3UTR GCA 72 bp | GAACACTGGCCAGATTCCCAGGGTGCCAGGGCCACATaGACTGCTGAAAAGTTTCTGTGTGGTCTGAGGACT | + |
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Preference number: 3 (lower is better) Translates to: EHWPDSQGARAT*TAEKFLCGLRT Trigger: AGTCCTCAGACCACACAGAAACTTTTCAGCAGTGCATGTGGCCCTGGCACCCTGGGAATCTGGCCAGTGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100785.7 ENSMUST00000201172.2 |
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| 3UTR CCA 72 bp | CTGCATGTTGTAGAAACAGTGCACCTTGATGAACACTaGCCAGATTCCCAGGGTGCCAGGGCCACATGCACT | + |
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Preference number: 3 (lower is better) Translates to: LHVVETVHLDEH*PDSQGARATCT Trigger: AGTGCATGTGGCCCTGGCACCCTGGGAATCTGGCCAGTGTTCATCAAGGTGCACTGTTTCTACAACATGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100785.7 ENSMUST00000201172.2 |
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| 3UTR-3UTR CAA 90 bp | AATGTATCCAGGTCTGAGCCTCCTTTGCCAGCAGGTCCCATGCCTGTAAGTCTGCTTCTCCTTACACAGTaGATACCAGTGCTTGACCAG | + |
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Preference number: 3 (lower is better) Translates to: NVSRSEPPLPAGPMPVSLLLLTQ*IPVLDQ Trigger: CTGGTCAAGCACTGGTATCAACTGTGTAAGGAGAAG...CAGACTTACAGGCATGGGACCTGCTGGCAAAGGAGGCTCAGACCTGGATACATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200786.2 |
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| 3UTR CCA 72 bp | CCACTATTGGACAGAACCTCCCAACAGGTGGACAGATaGAAGTCGAGCTTGCGTTCTTCTCTGTCCATCACA | + |
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Preference number: 3 (lower is better) Translates to: PLLDRTSQQVDR*KSSLRSSLSIT Trigger: TGTGATGGACAGAGAAGAACGCAAGCTCGACTTCCATCTGTCCACCTGTTGGGAGGTTCTGTCCAATAGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100785.7 |
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| 3UTR CCA 72 bp | ACGATCAGCCACTATTGGACAGAACCTCCCAACAGGTaGACAGATGGAAGTCGAGCTTGCGTTCTTCTCTGT | + |
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Preference number: 3 (lower is better) Translates to: TISHYWTEPPNR*TDGSRACVLLC Trigger: ACAGAGAAGAACGCAAGCTCGACTTCCATCTGTCCACCTGTTGGGAGGTTCTGTCCAATAGTGGCTGATCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100785.7 |
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| 3UTR TCA 72 bp | ACCATGTCCAGTAGATTAGAAGGCATTTGTACTTGGTaGCCAGTTCTAAGACCGTTCGGAAGCACTGGGCTG | + |
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Preference number: 3 (lower is better) Translates to: TMSSRLEGICTW*PVLRPFGSTGL Trigger: CAGCCCAGTGCTTCCGAACGGTCTTAGAACTGGTCACCAAGTACAAATGCCTTCTAATCTACTGGACATGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200786.2 |
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| CDS-3UTR TCA 90 bp | GTGCACCTTGATGAACACTGGCCAGATTCCCAGGGTGCCAGGGCCACATGCACTCTGGGGAGCACAGCTTaGAGGTCAGAGACCTGGTGT | + |
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Preference number: 4 (lower is better) Translates to: VHLDEHWPDSQGARATCTLGSTA*RSETWC Trigger: ACACCAGGTCTCTGACCTTCAAGCTGTGCTCCCCAG...AGTGCATGTGGCCCTGGCACCCTGGGAATCTGGCCAGTGTTCATCAAGGTGCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100785.7 ENSMUST00000201172.2 |
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| CDS-3UTR TCA 90 bp | AAGTTTCTGTGTGGTCTGAGGACTCCCTCAGAGTGCACCCTCCCCCATGGCTTGCCCAGACGTAGACTGTaGGCAGCTCCAGGGCATACT | + |
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Preference number: 4 (lower is better) Translates to: KFLCGLRTPSECTLPHGLPRRRL*AAPGHT Trigger: AGTATGCCCTGGAGCTGCTCACAGTCTACGTCTGGG...CAAGCCATGGGGGAGGGTGCACTCTGAGGGAGTCCTCAGACCACACAGAAACTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100785.7 ENSMUST00000201172.2 |
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| CDS-3UTR TCA 90 bp | GGACTCCCTCAGAGTGCACCCTCCCCCATGGCTTGCTGTGATTTGATGATGACGCCCAGACGTAGACTGTaGGCAGCTCCAGGGCATACT | + |
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Preference number: 4 (lower is better) Translates to: GLPQSAPSPMACCDLMMTPRRRL*AAPGHT Trigger: AGTATGCCCTGGAGCTGCTCACAGTCTACGTCTGGG...CGTCATCATCAAATCACAGCAAGCCATGGGGGAGGGTGCACTCTGAGGGAGTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100785.7 ENSMUST00000201172.2 |
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| CDS-3UTR CCA 90 bp | GCTGAAAAGTTTCTGTGTGGTCTGAGGACTCCCTCAGAGTGCACCCTCCCCCATAATTCCACCTCCTGCTaGCGCTCTGGGGAGCACAGC | + |
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Preference number: 4 (lower is better) Translates to: AEKFLCGLRTPSECTLPHNSTSC*RSGEHS Trigger: GCTGTGCTCCCCAGAGCGCCAGCAGGAGGTGGAATT...ATGGGGGAGGGTGCACTCTGAGGGAGTCCTCAGACCACACAGAAACTTTTCAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000100785.7 ENSMUST00000201172.2 |
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| CDS-3UTR CCA 90 bp | ACTGGCCAGATTCCCAGGGTGCCAGGGCCACATGCACTGCTGAAAAGTTTCTGTAATTCCACCTCCTGCTaGCGCTCTGGGGAGCACAGC | + |
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Preference number: 4 (lower is better) Translates to: TGQIPRVPGPHALLKSFCNSTSC*RSGEHS Trigger: GCTGTGCTCCCCAGAGCGCCAGCAGGAGGTGGAATT...ACAGAAACTTTTCAGCAGTGCATGTGGCCCTGGCACCCTGGGAATCTGGCCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100785.7 ENSMUST00000201172.2 |
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| CDS-3UTR TCA 90 bp | AAAGTTTCTGTGTGGTCTGAGGACTCCCTCAGAGTGCACCCTCCCCCATGGCTTCTGGGGAGCACAGCTTaGAGGTCAGAGACCTGGTGT | + |
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Preference number: 4 (lower is better) Translates to: KVSVWSEDSLRVHPPPWLLGSTA*RSETWC Trigger: ACACCAGGTCTCTGACCTTCAAGCTGTGCTCCCCAG...AAGCCATGGGGGAGGGTGCACTCTGAGGGAGTCCTCAGACCACACAGAAACTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000100785.7 ENSMUST00000201172.2 |
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| CDS-3UTR TCA 90 bp | TTTCTGTGTGGTCTGAGGACTCCCTCAGAGTGCACCCTCCCCCATGGCTTGCTGCTGTCCATCACAGCCTaGCTCCCAGAGAACACTGTT | + |
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Preference number: 4 (lower is better) Translates to: FLCGLRTPSECTLPHGLLLSITA*LPENTV Trigger: AACAGTGTTCTCTGGGAGTCAGGCTGTGATGGACAG...CAGCAAGCCATGGGGGAGGGTGCACTCTGAGGGAGTCCTCAGACCACACAGAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000201172.2 |
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| CDS-3UTR CCA 90 bp | GTGCACCTTGATGAACACTGGCCAGATTCCCAGGGTGCCAGGGCCACATGCACTAAGCACTGGGCTGCATaGAGTCCAAAGCTGTCTTGG | + |
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Preference number: 4 (lower is better) Translates to: VHLDEHWPDSQGARATCTKHWAA*SPKLSW Trigger: CCAAGACAGCTTTGGACTCCATGCAGCCCAGTGCTT...AGTGCATGTGGCCCTGGCACCCTGGGAATCTGGCCAGTGTTCATCAAGGTGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100785.7 ENSMUST00000201172.2 |
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| CDS-3UTR TCA 90 bp | AAAGTTTCTGTGTGGTCTGAGGACTCCCTCAGAGTGCACCCTCCCCCATGGCTTGAATGTATCCAGGTCTaGGCCTCCTTTGCCAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: KVSVWSEDSLRVHPPPWLECIQV*ASFASR Trigger: CCTGCTGGCAAAGGAGGCTCAGACCTGGATACATTC...AAGCCATGGGGGAGGGTGCACTCTGAGGGAGTCCTCAGACCACACAGAAACTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100785.7 ENSMUST00000201172.2 |
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| CDS-3UTR GCA 90 bp | AAAGTTTCTGTGTGGTCTGAGGACTCCCTCAGAGTGCACCCTCCCCCATGGCTTGTTCCTTGTTGGGTCTaGCGGATCCAGGATCAGAGG | + |
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Preference number: 4 (lower is better) Translates to: KVSVWSEDSLRVHPPPWLVPCWV*RIQDQR Trigger: CCTCTGATCCTGGATCCGGCAGACCCAACAAGGAAC...AAGCCATGGGGGAGGGTGCACTCTGAGGGAGTCCTCAGACCACACAGAAACTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100785.7 ENSMUST00000201172.2 |
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| CDS-3UTR GCA 90 bp | CAGATTCCCAGGGTGCCAGGGCCACATGCACTGCTGAAAAGTTTCTGTGTGGTCGTTCCTTGTTGGGTCTaGCGGATCCAGGATCAGAGG | + |
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Preference number: 4 (lower is better) Translates to: QIPRVPGPHALLKSFCVVVPCWV*RIQDQR Trigger: CCTCTGATCCTGGATCCGGCAGACCCAACAAGGAAC...GACCACACAGAAACTTTTCAGCAGTGCATGTGGCCCTGGCACCCTGGGAATCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100785.7 ENSMUST00000201172.2 |
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| CDS-3UTR CCA 90 bp | GCTGAAAAGTTTCTGTGTGGTCTGAGGACTCCCTCAGAGTGCACCCTCCCCCATAGCCACGTTCCTTGTTaGGTCTGCCGGATCCAGGAT | + |
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Preference number: 4 (lower is better) Translates to: AEKFLCGLRTPSECTLPHSHVPC*VCRIQD Trigger: ATCCTGGATCCGGCAGACCCAACAAGGAACGTGGCT...ATGGGGGAGGGTGCACTCTGAGGGAGTCCTCAGACCACACAGAAACTTTTCAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000100785.7 ENSMUST00000201172.2 |
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| CDS-3UTR CCA 90 bp | ACTGGCCAGATTCCCAGGGTGCCAGGGCCACATGCACTGCTGAAAAGTTTCTGTAGCCACGTTCCTTGTTaGGTCTGCCGGATCCAGGAT | + |
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Preference number: 4 (lower is better) Translates to: TGQIPRVPGPHALLKSFCSHVPC*VCRIQD Trigger: ATCCTGGATCCGGCAGACCCAACAAGGAACGTGGCT...ACAGAAACTTTTCAGCAGTGCATGTGGCCCTGGCACCCTGGGAATCTGGCCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100785.7 ENSMUST00000201172.2 |
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| CDS-3UTR TCA 90 bp | CCTCAGAGTGCACCCTCCCCCATGGCTTGCTGTGATTTGATGATGACGATCAGCCACCATGTTGGCCTCTaGCCTTCCCTTGAGTGCATT | + |
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Preference number: 4 (lower is better) Translates to: PQSAPSPMACCDLMMTISHHVGL*PSLECI Trigger: AATGCACTCAAGGGAAGGTCAGAGGCCAACATGGTG...GCTGATCGTCATCATCAAATCACAGCAAGCCATGGGGGAGGGTGCACTCTGAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100785.7 |
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| CDS-3UTR TCA 90 bp | CAGATTCCCAGGGTGCCAGGGCCACATGCACTGCTGAAAAGTTTCTGTGTGGTCCACCATGTTGGCCTCTaGCCTTCCCTTGAGTGCATT | + |
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Preference number: 4 (lower is better) Translates to: QIPRVPGPHALLKSFCVVHHVGL*PSLECI Trigger: AATGCACTCAAGGGAAGGTCAGAGGCCAACATGGTG...GACCACACAGAAACTTTTCAGCAGTGCATGTGGCCCTGGCACCCTGGGAATCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100785.7 ENSMUST00000201172.2 |
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| CDS-3UTR CCA 90 bp | GCTGAAAAGTTTCTGTGTGGTCTGAGGACTCCCTCAGAGTGCACCCTCCCCCATAAGCACTGGGCTGCATaGAGTCCAAAGCTGTCTTGG | + |
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Preference number: 4 (lower is better) Translates to: AEKFLCGLRTPSECTLPHKHWAA*SPKLSW Trigger: CCAAGACAGCTTTGGACTCCATGCAGCCCAGTGCTT...ATGGGGGAGGGTGCACTCTGAGGGAGTCCTCAGACCACACAGAAACTTTTCAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000100785.7 ENSMUST00000201172.2 |
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| CDS-3UTR TCA 90 bp | GGACTCCCTCAGAGTGCACCCTCCCCCATGGCTTGCTGTGATTTGATGATGACGCCTCTGACCTTCCCTTaGGTGCATTGTGTTCATCAT | + |
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Preference number: 4 (lower is better) Translates to: GLPQSAPSPMACCDLMMTPLTFP*VHCVHH Trigger: ATGATGAACACAATGCACTCAAGGGAAGGTCAGAGG...CGTCATCATCAAATCACAGCAAGCCATGGGGGAGGGTGCACTCTGAGGGAGTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100785.7 ENSMUST00000201172.2 |
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| CDS-3UTR TCA 90 bp | CTATTGGACAGAACCTCCCAACAGGTGGACAGATGGAAGTCGAGCTTGCGTTCTGAATGTATCCAGGTCTaGGCCTCCTTTGCCAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: LLDRTSQQVDRWKSSLRSECIQV*ASFASR Trigger: CCTGCTGGCAAAGGAGGCTCAGACCTGGATACATTC...AGAACGCAAGCTCGACTTCCATCTGTCCACCTGTTGGGAGGTTCTGTCCAATAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100785.7 |
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| CDS-3UTR GCA 90 bp | CAGATTCCCAGGGTGCCAGGGCCACATGCACTGCTGAAAAGTTTCTGTGTGGTCCATGGCTTCTCTTGCTaGAACTGGAGCAGGTGTTTC | + |
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Preference number: 4 (lower is better) Translates to: QIPRVPGPHALLKSFCVVHGFSC*NWSRCF Trigger: GAAACACCTGCTCCAGTTGCAGCAAGAGAAGCCATG...GACCACACAGAAACTTTTCAGCAGTGCATGTGGCCCTGGCACCCTGGGAATCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100785.7 ENSMUST00000201172.2 |
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| CDS-3UTR GCA 90 bp | AAGTTTCTGTGTGGTCTGAGGACTCCCTCAGAGTGCACCCTCCCCCATGGCTTGGGCTCCTCTGAGCTCTaGACCTCAAACTTGAGTTTA | + |
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Preference number: 4 (lower is better) Translates to: KFLCGLRTPSECTLPHGLGSSEL*TSNLSL Trigger: TAAACTCAAGTTTGAGGTGCAGAGCTCAGAGGAGCC...CAAGCCATGGGGGAGGGTGCACTCTGAGGGAGTCCTCAGACCACACAGAAACTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100785.7 ENSMUST00000201172.2 |
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| CDS-3UTR GCA 90 bp | GGACTCCCTCAGAGTGCACCCTCCCCCATGGCTTGCTGTGATTTGATGATGACGGGCTCCTCTGAGCTCTaGACCTCAAACTTGAGTTTA | + |
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Preference number: 4 (lower is better) Translates to: GLPQSAPSPMACCDLMMTGSSEL*TSNLSL Trigger: TAAACTCAAGTTTGAGGTGCAGAGCTCAGAGGAGCC...CGTCATCATCAAATCACAGCAAGCCATGGGGGAGGGTGCACTCTGAGGGAGTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100785.7 ENSMUST00000201172.2 |
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| 3UTR CAA 72 bp | CCTCAGAGTGCACCCTCCCCCATGGCTTGCTGTGATTaGATGATGACGATCAGCCACTATTGGACAGAACCT | + |
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Preference number: 4 (lower is better) Translates to: PQSAPSPMACCD*MMTISHYWTEP Trigger: AGGTTCTGTCCAATAGTGGCTGATCGTCATCATCAAATCACAGCAAGCCATGGGGGAGGGTGCACTCTGAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100785.7 |
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| CDS-3UTR TCA 90 bp | GTGCACCTTGATGAACACTGGCCAGATTCCCAGGGTGCCAGGGCCACATGCACTTCTGCACCTCAAACTTaGGTTTACATGGCTTCTCTT | + |
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Preference number: 4 (lower is better) Translates to: VHLDEHWPDSQGARATCTSAPQT*VYMASL Trigger: AAGAGAAGCCATGTAAACTCAAGTTTGAGGTGCAGA...AGTGCATGTGGCCCTGGCACCCTGGGAATCTGGCCAGTGTTCATCAAGGTGCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100785.7 ENSMUST00000201172.2 |
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| CDS-3UTR TCA 90 bp | AAAGTTTCTGTGTGGTCTGAGGACTCCCTCAGAGTGCACCCTCCCCCATGGCTTGGCATTTGTACTTGGTaGCCAGTTCTAAGACCGTTC | + |
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Preference number: 4 (lower is better) Translates to: KVSVWSEDSLRVHPPPWLGICTW*PVLRPF Trigger: GAACGGTCTTAGAACTGGTCACCAAGTACAAATGCC...AAGCCATGGGGGAGGGTGCACTCTGAGGGAGTCCTCAGACCACACAGAAACTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100785.7 ENSMUST00000201172.2 |
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| CDS-3UTR TCA 90 bp | ATGAACACTGGCCAGATTCCCAGGGTGCCAGGGCCACATGCACTGCTGAAAAGTGGCATTTGTACTTGGTaGCCAGTTCTAAGACCGTTC | + |
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Preference number: 4 (lower is better) Translates to: MNTGQIPRVPGPHALLKSGICTW*PVLRPF Trigger: GAACGGTCTTAGAACTGGTCACCAAGTACAAATGCC...ACTTTTCAGCAGTGCATGTGGCCCTGGCACCCTGGGAATCTGGCCAGTGTTCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100785.7 ENSMUST00000201172.2 |
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| CDS-3UTR GCA 90 bp | ACCTTGATGAACACTGGCCAGATTCCCAGGGTGCCAGGGCCACATGCACTGCTGTCTTCAATGAACACTTaGTGCCACTTTAACTGGTCC | + |
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Preference number: 4 (lower is better) Translates to: TLMNTGQIPRVPGPHALLSSMNT*CHFNWS Trigger: GGACCAGTTAAAGTGGCAGCAAGTGTTCATTGAAGA...CAGCAGTGCATGTGGCCCTGGCACCCTGGGAATCTGGCCAGTGTTCATCAAGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100785.7 ENSMUST00000201172.2 |
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| CDS-3UTR TCA 90 bp | AAGTTTCTGTGTGGTCTGAGGACTCCCTCAGAGTGCACCCTCCCCCATGGCTTGTCTGCACCTCAAACTTaGGTTTACATGGCTTCTCTT | + |
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Preference number: 4 (lower is better) Translates to: KFLCGLRTPSECTLPHGLSAPQT*VYMASL Trigger: AAGAGAAGCCATGTAAACTCAAGTTTGAGGTGCAGA...CAAGCCATGGGGGAGGGTGCACTCTGAGGGAGTCCTCAGACCACACAGAAACTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100785.7 ENSMUST00000201172.2 |
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| CDS-3UTR TCA 90 bp | AAAGTTTCTGTGTGGTCTGAGGACTCCCTCAGAGTGCACCCTCCCCCATGGCTTTTCTCCTTACACAGTTaGTACCAGTGCTTGACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KVSVWSEDSLRVHPPPWLFSLHS*YQCLTR Trigger: TCTGGTCAAGCACTGGTATCAACTGTGTAAGGAGAA...AAGCCATGGGGGAGGGTGCACTCTGAGGGAGTCCTCAGACCACACAGAAACTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000100785.7 ENSMUST00000201172.2 |
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| CDS-3UTR TCA 90 bp | CAGATTCCCAGGGTGCCAGGGCCACATGCACTGCTGAAAAGTTTCTGTGTGGTCTTCTCCTTACACAGTTaGTACCAGTGCTTGACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: QIPRVPGPHALLKSFCVVFSLHS*YQCLTR Trigger: TCTGGTCAAGCACTGGTATCAACTGTGTAAGGAGAA...GACCACACAGAAACTTTTCAGCAGTGCATGTGGCCCTGGCACCCTGGGAATCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100785.7 ENSMUST00000201172.2 |
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| CDS-3UTR GCA 90 bp | GGACTCCCTCAGAGTGCACCCTCCCCCATGGCTTGCTGTGATTTGATGATGACGTCTTCAATGAACACTTaGTGCCACTTTAACTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GLPQSAPSPMACCDLMMTSSMNT*CHFNWS Trigger: GGACCAGTTAAAGTGGCAGCAAGTGTTCATTGAAGA...CGTCATCATCAAATCACAGCAAGCCATGGGGGAGGGTGCACTCTGAGGGAGTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100785.7 ENSMUST00000201172.2 |
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| CDS-3UTR CCA 90 bp | ACTGGCCAGATTCCCAGGGTGCCAGGGCCACATGCACTGCTGAAAAGTTTCTGTTTCTCTTGCTGCAACTaGAGCAGGTGTTTCCGAATT | + |
|
Preference number: 4 (lower is better) Translates to: TGQIPRVPGPHALLKSFCFSCCN*SRCFRI Trigger: AATTCGGAAACACCTGCTCCAGTTGCAGCAAGAGAA...ACAGAAACTTTTCAGCAGTGCATGTGGCCCTGGCACCCTGGGAATCTGGCCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100785.7 ENSMUST00000201172.2 |
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| CDS-3UTR CCA 90 bp | GTCCTCTCTAGGTCAAAGTCTTACAGCGGAGGAGCACATGATCCTGACTCTGGAAGTCCAAAGCTGTCTTaGACCCCAAATTCCCAGACG | + |
|
Preference number: 4 (lower is better) Translates to: VLSRSKSYSGGAHDPDSGSPKLS*TPNSQT Trigger: CGTCTGGGAATTTGGGGTCCAAGACAGCTTTGGACT...TCCAGAGTCAGGATCATGTGCTCCTCCGCTGTAAGACTTTGACCTAGAGAGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100785.7 |
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| CDS-3UTR GCA 90 bp | TATTGGACAGAACCTCCCAACAGGTGGACAGATGGAAGTCGAGCTTGCGTTCTTCATGGCTTCTCTTGCTaGAACTGGAGCAGGTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: YWTEPPNRWTDGSRACVLHGFSC*NWSRCF Trigger: GAAACACCTGCTCCAGTTGCAGCAAGAGAAGCCATG...AAGAACGCAAGCTCGACTTCCATCTGTCCACCTGTTGGGAGGTTCTGTCCAATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100785.7 |
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| CDS-3UTR GCA 90 bp | CTATTGGACAGAACCTCCCAACAGGTGGACAGATGGAAGTCGAGCTTGCGTTCTTTACATGGCTTCTCTTaGTGCAACTGGAGCAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LLDRTSQQVDRWKSSLRSLHGFS*CNWSRC Trigger: ACACCTGCTCCAGTTGCAGCAAGAGAAGCCATGTAA...AGAACGCAAGCTCGACTTCCATCTGTCCACCTGTTGGGAGGTTCTGTCCAATAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100785.7 |
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| CDS-3UTR TCA 90 bp | TATTGGACAGAACCTCCCAACAGGTGGACAGATGGAAGTCGAGCTTGCGTTCTTCCTCTGACCTTCCCTTaGGTGCATTGTGTTCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: YWTEPPNRWTDGSRACVLPLTFP*VHCVHH Trigger: ATGATGAACACAATGCACTCAAGGGAAGGTCAGAGG...AAGAACGCAAGCTCGACTTCCATCTGTCCACCTGTTGGGAGGTTCTGTCCAATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100785.7 |
||
| CDS-3UTR TCA 90 bp | ACTGGCCAGATTCCCAGGGTGCCAGGGCCACATGCACTGCTGAAAAGTTTCTGTTCCGAATTTCTTCAATaGACACTTGCTGCCACTTTA | + |
|
Preference number: 4 (lower is better) Translates to: TGQIPRVPGPHALLKSFCSEFLQ*TLAATL Trigger: TAAAGTGGCAGCAAGTGTTCATTGAAGAAATTCGGA...ACAGAAACTTTTCAGCAGTGCATGTGGCCCTGGCACCCTGGGAATCTGGCCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100785.7 ENSMUST00000201172.2 |
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| CDS-3UTR CCA 90 bp | TTTGATGATGACGATCAGCCACTATTGGACAGAACCTCCCAACAGGTGGACAGATTCTCTTGCTGCAACTaGAGCAGGTGTTTCCGAATT | + |
|
Preference number: 4 (lower is better) Translates to: FDDDDQPLLDRTSQQVDRFSCCN*SRCFRI Trigger: AATTCGGAAACACCTGCTCCAGTTGCAGCAAGAGAA...TCTGTCCACCTGTTGGGAGGTTCTGTCCAATAGTGGCTGATCGTCATCATCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100785.7 |
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| CDS TCA 90 bp | GCACATCAAATTCCACCTCCTGCTGGCGCTCTGGGGAGCACAGCTTaGAGGTCAGAGACCTGGTGTTGGGCTCCTCTGAGCTCTGCACCT | + |
|
Preference number: 5 (lower is better) Translates to: AHQIPPPAGALGSTA*RSETWCWAPLSSAP Trigger: AGGTGCAGAGCTCAGAGGAGCCCAACACCAGGTCTCTGACCTTCAAGCTGTGCTCCCCAGAGCGCCAGCAGGAGGTGGAATTTGATGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100785.7 ENSMUST00000201172.2 |
||
| CDS-3UTR CAA 90 bp | AAGTTTCTGTGTGGTCTGAGGACTCCCTCAGAGTGCACCCTCCCCCATGGCTTGGTCAGAGACCTGGTGTaGGGCTCCTCTGAGCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: KFLCGLRTPSECTLPHGLVRDLV*GSSELC Trigger: GCAGAGCTCAGAGGAGCCCAACACCAGGTCTCTGAC...CAAGCCATGGGGGAGGGTGCACTCTGAGGGAGTCCTCAGACCACACAGAAACTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100785.7 ENSMUST00000201172.2 |
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| CDS TCA 90 bp | AGAGCTTGGGCGCACGATACCTCAGGAAGCTCTGATGAAGGTCGGTaGAGCAGATGGAGAACTCGCCCTCCTTCTCCAGGGTGGTGCACT | + |
|
Preference number: 5 (lower is better) Translates to: RAWAHDTSGSSDEGR*SRWRTRPPSPGWCT Trigger: AGTGCACCACCCTGGAGAAGGAGGGCGAGTTCTCCATCTGCTTCACCGACCTTCATCAGAGCTTCCTGAGGTATCGTGCGCCCAAGCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100785.7 ENSMUST00000201172.2 |
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| CDS-3UTR CAA 90 bp | GATGAACACTGGCCAGATTCCCAGGGTGCCAGGGCCACATGCACTGCTGAAAAGTCTGGGGAGCACAGCTaGAAGGTCAGAGACCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: DEHWPDSQGARATCTAEKSGEHS*KVRDLV Trigger: CACCAGGTCTCTGACCTTCAAGCTGTGCTCCCCAGA...CTTTTCAGCAGTGCATGTGGCCCTGGCACCCTGGGAATCTGGCCAGTGTTCATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100785.7 ENSMUST00000201172.2 |
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| CDS-3UTR CAA 90 bp | CCTCAGAGTGCACCCTCCCCCATGGCTTGCTGTGATTTGATGATGACGATCAGCTCTGGGGAGCACAGCTaGAAGGTCAGAGACCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: PQSAPSPMACCDLMMTISSGEHS*KVRDLV Trigger: CACCAGGTCTCTGACCTTCAAGCTGTGCTCCCCAGA...GCTGATCGTCATCATCAAATCACAGCAAGCCATGGGGGAGGGTGCACTCTGAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100785.7 |
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| CDS CCA 90 bp | CCTCCCATCACAACCCTGGCGACCCTCATAGGGTGGGTGGCACCTTaGAAGCATCTCTCCTTCAGGAAAGCACTTATGGAGTCGATGTCT | + |
|
Preference number: 5 (lower is better) Translates to: PPITTLATLIGWVAP*KHLSFRKALMESMS Trigger: AGACATCGACTCCATAAGTGCTTTCCTGAAGGAGAGATGCTTCCAAGGTGCCACCCACCCTATGAGGGTCGCCAGGGTTGTGATGGGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100785.7 ENSMUST00000201172.2 |
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| CDS CCA 90 bp | GCAGTATCCCCCTTCATCATCACAACCCTGGCGACCCTCATAGGGTaGGTGGCACCTTGGAAGCATCTCTCCTTCAGGAAAGCACTTATG | + |
|
Preference number: 5 (lower is better) Translates to: AVSPFIITTLATLIG*VAPWKHLSFRKALM Trigger: CATAAGTGCTTTCCTGAAGGAGAGATGCTTCCAAGGTGCCACCCACCCTATGAGGGTCGCCAGGGTTGTGATGATGAAGGGGGATACTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200786.2 |
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| CDS-3UTR CAA 90 bp | AAGTTTCTGTGTGGTCTGAGGACTCCCTCAGAGTGCACCCTCCCCCATGGCTTGTTTACATGGCTTCTCTaGCTGCAACTGGAGCAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: KFLCGLRTPSECTLPHGLFTWLL*LQLEQV Trigger: CACCTGCTCCAGTTGCAGCAAGAGAAGCCATGTAAA...CAAGCCATGGGGGAGGGTGCACTCTGAGGGAGTCCTCAGACCACACAGAAACTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100785.7 ENSMUST00000201172.2 |
||
| CDS-3UTR CAA 90 bp | GAAAAGTTTCTGTGTGGTCTGAGGACTCCCTCAGAGTGCACCCTCCCCCATGGCTTTACATGGCTTCTCTaGCTGCAACTGGAGCAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: EKFLCGLRTPSECTLPHGFTWLL*LQLEQV Trigger: CACCTGCTCCAGTTGCAGCAAGAGAAGCCATGTAAA...GCCATGGGGGAGGGTGCACTCTGAGGGAGTCCTCAGACCACACAGAAACTTTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000100785.7 ENSMUST00000201172.2 |
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| CDS-3UTR CAA 90 bp | ATGATGACGATCAGCCACTATTGGACAGAACCTCCCAACAGGTGGACAGATGGAGTCAGAGACCTGGTGTaGGGCTCCTCTGAGCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: MMTISHYWTEPPNRWTDGVRDLV*GSSELC Trigger: GCAGAGCTCAGAGGAGCCCAACACCAGGTCTCTGAC...TCCATCTGTCCACCTGTTGGGAGGTTCTGTCCAATAGTGGCTGATCGTCATCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100785.7 |
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| CDS TCA 90 bp | TGGGGAGCACAGCTTGAAGGTCAGAGACCTGGTGTTGGGCTCCTCTaGGCTCTGCACCTCAAACTTGAGTTTACATGGCTTCTCTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: WGAQLEGQRPGVGLL*ALHLKLEFTWLLLL Trigger: CAGCAAGAGAAGCCATGTAAACTCAAGTTTGAGGTGCAGAGCTCAGAGGAGCCCAACACCAGGTCTCTGACCTTCAAGCTGTGCTCCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100785.7 ENSMUST00000201172.2 |
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| CDS TCA 90 bp | GACAGATGGAAGTCGAGCTTGCGTTCTTCTCTGTCCATCACAGCCTaGCTCCCAGAGAACACTGTTGGAAGCGACACTTCCCAGCCATTC | + |
|
Preference number: 5 (lower is better) Translates to: DRWKSSLRSSLSITA*LPENTVGSDTSQPF Trigger: GAATGGCTGGGAAGTGTCGCTTCCAACAGTGTTCTCTGGGAGTCAGGCTGTGATGGACAGAGAAGAACGCAAGCTCGACTTCCATCTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201172.2 |
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| CDS CCA 90 bp | TTCAAAGGACTTGCAGTATCCCCCTTCATACAGAGCATCATAGGCTaGCTGCACATCAAATTCCACCTCCTGCTGGCGCTCTGGGGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: FKGLAVSPFIQSIIG*LHIKFHLLLALWGA Trigger: TGCTCCCCAGAGCGCCAGCAGGAGGTGGAATTTGATGTGCAGCCAGCCTATGATGCTCTGTATGAAGGGGGATACTGCAAGTCCTTTGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000100785.7 ENSMUST00000201172.2 |
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| CDS-3UTR CAA 90 bp | TTTCTGTGTGGTCTGAGGACTCCCTCAGAGTGCACCCTCCCCCATGGCTTGCTGGGTGTCAGGAAGGAGTaGATCCTCTATGAAGTTATC | + |
|
Preference number: 5 (lower is better) Translates to: FLCGLRTPSECTLPHGLLGVRKE*ILYEVI Trigger: GATAACTTCATAGAGGATCAACTCCTTCCTGACACC...CAGCAAGCCATGGGGGAGGGTGCACTCTGAGGGAGTCCTCAGACCACACAGAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100785.7 ENSMUST00000201172.2 |
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| CDS CCA 90 bp | TTCATCATCACAACCCTGGCGACCCTCATAGGGTGGGTGGCACCTTaGAAGCATCTCTCCTTCAGGAAAGCACTTATGGAGTCGATGTCT | + |
|
Preference number: 5 (lower is better) Translates to: FIITTLATLIGWVAP*KHLSFRKALMESMS Trigger: AGACATCGACTCCATAAGTGCTTTCCTGAAGGAGAGATGCTTCCAAGGTGCCACCCACCCTATGAGGGTCGCCAGGGTTGTGATGATGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200786.2 |
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| CDS-3UTR CAA 90 bp | GGGCATACTGTGGAGGCAGCGGTCCCCTCAGCTTCTCCTTACACAGTTGATACCGGTGTCAGGAAGGAGTaGATCCTCTATGAAGTTATC | + |
|
Preference number: 5 (lower is better) Translates to: GHTVEAAVPSASPYTVDTGVRKE*ILYEVI Trigger: GATAACTTCATAGAGGATCAACTCCTTCCTGACACC...GGTATCAACTGTGTAAGGAGAAGCTGAGGGGACCGCTGCCTCCACAGTATGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200786.2 |
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| CDS-3UTR CAA 90 bp | AAGTTTCTGTGTGGTCTGAGGACTCCCTCAGAGTGCACCCTCCCCCATGGCTTGGGTGTCAGGAAGGAGTaGATCCTCTATGAAGTTATC | + |
|
Preference number: 5 (lower is better) Translates to: KFLCGLRTPSECTLPHGLGVRKE*ILYEVI Trigger: GATAACTTCATAGAGGATCAACTCCTTCCTGACACC...CAAGCCATGGGGGAGGGTGCACTCTGAGGGAGTCCTCAGACCACACAGAAACTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100785.7 ENSMUST00000201172.2 |
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| CDS TCA 90 bp | ATGTCTGCTCTGAGCTCAGTAAGGAAGGTGGTGTCAGGAAGGAGTTaGTCCTCTATGAAGTTATCCAGCCTCCAGATTGGGGTTCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: MSALSSVRKVVSGRS*SSMKLSSLQIGVLK Trigger: CTTCAGAACCCCAATCTGGAGGCTGGATAACTTCATAGAGGATCAACTCCTTCCTGACACCACCTTCCTTACTGAGCTCAGAGCAGACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100785.7 ENSMUST00000200786.2 ENSMUST00000201172.2 |
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| CDS CCA 90 bp | CTCTGCACCTCAAACTTGAGTTTACATGGCTTCTCTTGCTGCAACTaGAGCAGGTGTTTCCGAATTTCTTCAATGAACACTTGCTGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: LCTSNLSLHGFSCCN*SRCFRISSMNTCCH Trigger: GTGGCAGCAAGTGTTCATTGAAGAAATTCGGAAACACCTGCTCCAGTTGCAGCAAGAGAAGCCATGTAAACTCAAGTTTGAGGTGCAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100785.7 ENSMUST00000201172.2 |
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| CDS GCA 90 bp | TCCTCTGAGCTCTGCACCTCAAACTTGAGTTTACATGGCTTCTCTTaGTGCAACTGGAGCAGGTGTTTCCGAATTTCTTCAATGAACACT | + |
|
Preference number: 5 (lower is better) Translates to: SSELCTSNLSLHGFS*CNWSRCFRISSMNT Trigger: AGTGTTCATTGAAGAAATTCGGAAACACCTGCTCCAGTTGCAGCAAGAGAAGCCATGTAAACTCAAGTTTGAGGTGCAGAGCTCAGAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100785.7 ENSMUST00000201172.2 |
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| CDS GCA 90 bp | TGCAACTGGAGCAGGTGTTTCCGAATTTCTTCAATGAACACTTGCTaGCACTTTAACTGGTCCTCAAAGCTGGTGAGATCATTAAAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: CNWSRCFRISSMNTC*HFNWSSKLVRSLKN Trigger: GTTCTTTAATGATCTCACCAGCTTTGAGGACCAGTTAAAGTGGCAGCAAGTGTTCATTGAAGAAATTCGGAAACACCTGCTCCAGTTGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100785.7 ENSMUST00000201172.2 |
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| CDS TCA 72 bp | ATTCCACCTCCTGCTGGCGCTCTGGGGAGCACAGCTTaGAGGTCAGAGACCTGGTGTTGGGCTCCTCTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: IPPPAGALGSTA*RSETWCWAPLS Trigger: GCTCAGAGGAGCCCAACACCAGGTCTCTGACCTTCAAGCTGTGCTCCCCAGAGCGCCAGCAGGAGGTGGAAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100785.7 ENSMUST00000201172.2 |
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| CDS CAA 72 bp | AATTCCACCTCCTGCTGGCGCTCTGGGGAGCACAGCTaGAAGGTCAGAGACCTGGTGTTGGGCTCCTCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: NSTSCWRSGEHS*KVRDLVLGSSE Trigger: CTCAGAGGAGCCCAACACCAGGTCTCTGACCTTCAAGCTGTGCTCCCCAGAGCGCCAGCAGGAGGTGGAATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100785.7 ENSMUST00000201172.2 |
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| CDS CAA 90 bp | TGCACATCAAATTCCACCTCCTGCTGGCGCTCTGGGGAGCACAGCTaGAAGGTCAGAGACCTGGTGTTGGGCTCCTCTGAGCTCTGCACC | + |
|
Preference number: 6 (lower is better) Translates to: CTSNSTSCWRSGEHS*KVRDLVLGSSELCT Trigger: GGTGCAGAGCTCAGAGGAGCCCAACACCAGGTCTCTGACCTTCAAGCTGTGCTCCCCAGAGCGCCAGCAGGAGGTGGAATTTGATGTGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100785.7 ENSMUST00000201172.2 |
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| CDS TCA 72 bp | GCGCACGATACCTCAGGAAGCTCTGATGAAGGTCGGTaGAGCAGATGGAGAACTCGCCCTCCTTCTCCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: AHDTSGSSDEGR*SRWRTRPPSPG Trigger: CCCTGGAGAAGGAGGGCGAGTTCTCCATCTGCTTCACCGACCTTCATCAGAGCTTCCTGAGGTATCGTGCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100785.7 ENSMUST00000201172.2 |
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| CDS CAA 90 bp | GCCTCCCATCACAACCCTGGCGACCCTCATAGGGTGGGTGGCACCTaGGAAGCATCTCTCCTTCAGGAAAGCACTTATGGAGTCGATGTC | + |
|
Preference number: 6 (lower is better) Translates to: ASHHNPGDPHRVGGT*EASLLQESTYGVDV Trigger: GACATCGACTCCATAAGTGCTTTCCTGAAGGAGAGATGCTTCCAAGGTGCCACCCACCCTATGAGGGTCGCCAGGGTTGTGATGGGAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100785.7 ENSMUST00000201172.2 |
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| CDS CAA 72 bp | TCTGGGGAGCACAGCTTGAAGGTCAGAGACCTGGTGTaGGGCTCCTCTGAGCTCTGCACCTCAAACTTGAGT | + |
|
Preference number: 6 (lower is better) Translates to: SGEHSLKVRDLV*GSSELCTSNLS Trigger: ACTCAAGTTTGAGGTGCAGAGCTCAGAGGAGCCCAACACCAGGTCTCTGACCTTCAAGCTGTGCTCCCCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100785.7 ENSMUST00000201172.2 |
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| CDS CCA 72 bp | CTTGCAGTATCCCCCTTCATACAGAGCATCATAGGCTaGCTGCACATCAAATTCCACCTCCTGCTGGCGCTC | + |
|
Preference number: 6 (lower is better) Translates to: LAVSPFIQSIIG*LHIKFHLLLAL Trigger: GAGCGCCAGCAGGAGGTGGAATTTGATGTGCAGCCAGCCTATGATGCTCTGTATGAAGGGGGATACTGCAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100785.7 ENSMUST00000201172.2 |
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| CDS CAA 90 bp | CTTCATCATCACAACCCTGGCGACCCTCATAGGGTGGGTGGCACCTaGGAAGCATCTCTCCTTCAGGAAAGCACTTATGGAGTCGATGTC | + |
|
Preference number: 6 (lower is better) Translates to: LHHHNPGDPHRVGGT*EASLLQESTYGVDV Trigger: GACATCGACTCCATAAGTGCTTTCCTGAAGGAGAGATGCTTCCAAGGTGCCACCCACCCTATGAGGGTCGCCAGGGTTGTGATGATGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200786.2 |
||
| CDS CAA 72 bp | CTGGTGTTGGGCTCCTCTGAGCTCTGCACCTCAAACTaGAGTTTACATGGCTTCTCTTGCTGCAACTGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: LVLGSSELCTSN*SLHGFSCCNWS Trigger: GCTCCAGTTGCAGCAAGAGAAGCCATGTAAACTCAAGTTTGAGGTGCAGAGCTCAGAGGAGCCCAACACCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100785.7 ENSMUST00000201172.2 |
||
| CDS CAA 90 bp | GTCAGAGACCTGGTGTTGGGCTCCTCTGAGCTCTGCACCTCAAACTaGAGTTTACATGGCTTCTCTTGCTGCAACTGGAGCAGGTGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: VRDLVLGSSELCTSN*SLHGFSCCNWSRCF Trigger: GAAACACCTGCTCCAGTTGCAGCAAGAGAAGCCATGTAAACTCAAGTTTGAGGTGCAGAGCTCAGAGGAGCCCAACACCAGGTCTCTGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100785.7 ENSMUST00000201172.2 |
||
| CDS TCA 72 bp | CAGCTTGAAGGTCAGAGACCTGGTGTTGGGCTCCTCTaGGCTCTGCACCTCAAACTTGAGTTTACATGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: QLEGQRPGVGLL*ALHLKLEFTWL Trigger: AAGCCATGTAAACTCAAGTTTGAGGTGCAGAGCTCAGAGGAGCCCAACACCAGGTCTCTGACCTTCAAGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100785.7 ENSMUST00000201172.2 |
||
| CDS GCA 72 bp | AAGGTCAGAGACCTGGTGTTGGGCTCCTCTGAGCTCTaGACCTCAAACTTGAGTTTACATGGCTTCTCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: KVRDLVLGSSEL*TSNLSLHGFSC Trigger: GCAAGAGAAGCCATGTAAACTCAAGTTTGAGGTGCAGAGCTCAGAGGAGCCCAACACCAGGTCTCTGACCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100785.7 ENSMUST00000201172.2 |
||
| CDS CAA 90 bp | GGAGAACTCGCCCTCCTTCTCCAGGGTGGTGCACTCATGGATGAGTaGGGCGTAGACTTTGTTGTAGTTAATGGATTCAAAGGACTTGCA | + |
|
Preference number: 6 (lower is better) Translates to: GELALLLQGGALMDE*GVDFVVVNGFKGLA Trigger: TGCAAGTCCTTTGAATCCATTAACTACAACAAAGTCTACGCCCAACTCATCCATGAGTGCACCACCCTGGAGAAGGAGGGCGAGTTCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100785.7 ENSMUST00000200786.2 ENSMUST00000201172.2 |
||
| CDS TCA 72 bp | CTGAGCTCAGTAAGGAAGGTGGTGTCAGGAAGGAGTTaGTCCTCTATGAAGTTATCCAGCCTCCAGATTGGG | + |
|
Preference number: 6 (lower is better) Translates to: LSSVRKVVSGRS*SSMKLSSLQIG Trigger: CCCAATCTGGAGGCTGGATAACTTCATAGAGGATCAACTCCTTCCTGACACCACCTTCCTTACTGAGCTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100785.7 ENSMUST00000200786.2 ENSMUST00000201172.2 |
||
| CDS CAA 90 bp | GATGTCTGCTCTGAGCTCAGTAAGGAAGGTGGTGTCAGGAAGGAGTaGATCCTCTATGAAGTTATCCAGCCTCCAGATTGGGGTTCTGAA | + |
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Preference number: 6 (lower is better) Translates to: DVCSELSKEGGVRKE*ILYEVIQPPDWGSE Trigger: TTCAGAACCCCAATCTGGAGGCTGGATAACTTCATAGAGGATCAACTCCTTCCTGACACCACCTTCCTTACTGAGCTCAGAGCAGACATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100785.7 ENSMUST00000200786.2 ENSMUST00000201172.2 |
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| CDS CAA 72 bp | TCTGAGCTCAGTAAGGAAGGTGGTGTCAGGAAGGAGTaGATCCTCTATGAAGTTATCCAGCCTCCAGATTGG | + |
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Preference number: 6 (lower is better) Translates to: SELSKEGGVRKE*ILYEVIQPPDW Trigger: CCAATCTGGAGGCTGGATAACTTCATAGAGGATCAACTCCTTCCTGACACCACCTTCCTTACTGAGCTCAGA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100785.7 ENSMUST00000200786.2 ENSMUST00000201172.2 |
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| CDS CAA 72 bp | GCCCTCCTTCTCCAGGGTGGTGCACTCATGGATGAGTaGGGCGTAGACTTTGTTGTAGTTAATGGATTCAAA | + |
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Preference number: 6 (lower is better) Translates to: ALLLQGGALMDE*GVDFVVVNGFK Trigger: TTTGAATCCATTAACTACAACAAAGTCTACGCCCAACTCATCCATGAGTGCACCACCCTGGAGAAGGAGGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100785.7 ENSMUST00000200786.2 ENSMUST00000201172.2 |
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| CDS TCA 72 bp | GCTGCAACTGGAGCAGGTGTTTCCGAATTTCTTCAATaGACACTTGCTGCCACTTTAACTGGTCCTCAAAGC | + |
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Preference number: 6 (lower is better) Translates to: AATGAGVSEFLQ*TLAATLTGPQS Trigger: GCTTTGAGGACCAGTTAAAGTGGCAGCAAGTGTTCATTGAAGAAATTCGGAAACACCTGCTCCAGTTGCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100785.7 ENSMUST00000201172.2 |
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| CDS CAA 72 bp | GCTCTGCACCTCAAACTTGAGTTTACATGGCTTCTCTaGCTGCAACTGGAGCAGGTGTTTCCGAATTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: ALHLKLEFTWLL*LQLEQVFPNFF Trigger: GAAGAAATTCGGAAACACCTGCTCCAGTTGCAGCAAGAGAAGCCATGTAAACTCAAGTTTGAGGTGCAGAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100785.7 ENSMUST00000201172.2 |
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| CDS GCA 72 bp | TGGAGCAGGTGTTTCCGAATTTCTTCAATGAACACTTaGTGCCACTTTAACTGGTCCTCAAAGCTGGTGAGA | + |
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Preference number: 6 (lower is better) Translates to: WSRCFRISSMNT*CHFNWSSKLVR Trigger: TCTCACCAGCTTTGAGGACCAGTTAAAGTGGCAGCAAGTGTTCATTGAAGAAATTCGGAAACACCTGCTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100785.7 ENSMUST00000201172.2 |
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| CDS GCA 72 bp | CTCTGCACCTCAAACTTGAGTTTACATGGCTTCTCTTaGTGCAACTGGAGCAGGTGTTTCCGAATTTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: LCTSNLSLHGFS*CNWSRCFRISS Trigger: TGAAGAAATTCGGAAACACCTGCTCCAGTTGCAGCAAGAGAAGCCATGTAAACTCAAGTTTGAGGTGCAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100785.7 ENSMUST00000201172.2 |
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| CDS GCA 72 bp | AGCAGGTGTTTCCGAATTTCTTCAATGAACACTTGCTaGCACTTTAACTGGTCCTCAAAGCTGGTGAGATCA | + |
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Preference number: 6 (lower is better) Translates to: SRCFRISSMNTC*HFNWSSKLVRS Trigger: TGATCTCACCAGCTTTGAGGACCAGTTAAAGTGGCAGCAAGTGTTCATTGAAGAAATTCGGAAACACCTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100785.7 ENSMUST00000201172.2 |
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| CDS GCA 72 bp | TGCACCTCAAACTTGAGTTTACATGGCTTCTCTTGCTaGAACTGGAGCAGGTGTTTCCGAATTTCTTCAATG | + |
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Preference number: 6 (lower is better) Translates to: CTSNLSLHGFSC*NWSRCFRISSM Trigger: CATTGAAGAAATTCGGAAACACCTGCTCCAGTTGCAGCAAGAGAAGCCATGTAAACTCAAGTTTGAGGTGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100785.7 ENSMUST00000201172.2 |
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| CDS CCA 72 bp | CGAATTTCTTCAATGAACACTTGCTGCCACTTTAACTaGTCCTCAAAGCTGGTGAGATCATTAAAGAACACC | + |
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Preference number: 6 (lower is better) Translates to: RISSMNTCCHFN*SSKLVRSLKNT Trigger: GGTGTTCTTTAATGATCTCACCAGCTTTGAGGACCAGTTAAAGTGGCAGCAAGTGTTCATTGAAGAAATTCG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100785.7 ENSMUST00000201172.2 |
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