Pregenerated sensors for OAS1D (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032623Ensembl transcript IDs: ENSMUST00000044224.5
Found 80 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CACCTTGATGAACACTGGCCAGATTCCCAGGGCTCCAGGGCCACATaGACTGCTGAAAAGTTTCTGTGTGGTCTGAGGACTCCTCCCTCA | + |
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Preference number: 1 (lower is better) Translates to: HLDEHWPDSQGSRAT*TAEKFLCGLRTPPS Trigger: TGAGGGAGGAGTCCTCAGACCACACAGAAACTTTTCAGCAGTGCATGTGGCCCTGGAGCCCTGGGAATCTGGCCAGTGTTCATCAAGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044224.5 |
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| 3UTR CCA 90 bp | AAACCCAGCCTGCATGTTGCAGAAACAGTGCACCTTGATGAACACTaGCCAGATTCCCAGGGCTCCAGGGCCACATGCACTGCTGAAAAG | + |
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Preference number: 1 (lower is better) Translates to: KPSLHVAETVHLDEH*PDSQGSRATCTAEK Trigger: CTTTTCAGCAGTGCATGTGGCCCTGGAGCCCTGGGAATCTGGCCAGTGTTCATCAAGGTGCACTGTTTCTGCAACATGCAGGCTGGGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044224.5 |
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| 3UTR GCA 90 bp | TTTTCCTGCACTACCATAAACCCAGCCTGCATGTTGCAGAAACAGTaGACCTTGATGAACACTGGCCAGATTCCCAGGGCTCCAGGGCCA | + |
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Preference number: 1 (lower is better) Translates to: FSCTTINPACMLQKQ*TLMNTGQIPRAPGP Trigger: TGGCCCTGGAGCCCTGGGAATCTGGCCAGTGTTCATCAAGGTGCACTGTTTCTGCAACATGCAGGCTGGGTTTATGGTAGTGCAGGAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044224.5 |
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| 3UTR CAA 90 bp | TGCACTACCATAAACCCAGCCTGCATGTTGCAGAAACAGTGCACCTaGATGAACACTGGCCAGATTCCCAGGGCTCCAGGGCCACATGCA | + |
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Preference number: 2 (lower is better) Translates to: CTTINPACMLQKQCT*MNTGQIPRAPGPHA Trigger: TGCATGTGGCCCTGGAGCCCTGGGAATCTGGCCAGTGTTCATCAAGGTGCACTGTTTCTGCAACATGCAGGCTGGGTTTATGGTAGTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044224.5 |
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| 3UTR-3UTR TCA 90 bp | TCCTGCACTACCATAAACCCAGCCTGCATGTTGCAGAAACAGTGCACCTTGATGAGGAGGACATGCCCCTaGCTCTGGAGTCTCCTAGGC | + |
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Preference number: 2 (lower is better) Translates to: SCTTINPACMLQKQCTLMRRTCP*LWSLLG Trigger: GCCTAGGAGACTCCAGAGTCAGGGGCATGTCCTCCT...CATCAAGGTGCACTGTTTCTGCAACATGCAGGCTGGGTTTATGGTAGTGCAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044224.5 |
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| 3UTR-3UTR CCA 90 bp | AGTCGAGCTTGCGTTCTTCTCTGTCCATCACAGTCTGACTCCCAGAGAACACTGTTGGATGCCCCTCGCTaGAGCCTTGAGTGCCATCCT | + |
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Preference number: 2 (lower is better) Translates to: SRACVLLCPSQSDSQRTLLDAPR*SLECHP Trigger: AGGATGGCACTCAAGGCTCCAGCGAGGGGCATCCAA...CAGTGTTCTCTGGGAGTCAGACTGTGATGGACAGAGAAGAACGCAAGCTCGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044224.5 |
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| 3UTR-3UTR GCA 90 bp | AAACCCAGCCTGCATGTTGCAGAAACAGTGCACCTTGATGAACACTGGCCAGATCGCTGGAGCCTTGAGTaGCATCCTGTCTGTCCTCTC | + |
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Preference number: 2 (lower is better) Translates to: KPSLHVAETVHLDEHWPDRWSLE*HPVCPL Trigger: GAGAGGACAGACAGGATGGCACTCAAGGCTCCAGCG...ATCTGGCCAGTGTTCATCAAGGTGCACTGTTTCTGCAACATGCAGGCTGGGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044224.5 |
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| 3UTR-3UTR CCA 90 bp | ACAGTGCACCTTGATGAACACTGGCCAGATTCCCAGGGCTCCAGGGCCACATGCCCTCATGGCTTGCTGTaGTTTGTTGATGATGATCAG | + |
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Preference number: 2 (lower is better) Translates to: TVHLDEHWPDSQGSRATCPHGLL*FVDDDQ Trigger: CTGATCATCATCAACAAACCACAGCAAGCCATGAGG...GCATGTGGCCCTGGAGCCCTGGGAATCTGGCCAGTGTTCATCAAGGTGCACTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044224.5 |
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| 3UTR-3UTR TCA 90 bp | AAACCCAGCCTGCATGTTGCAGAAACAGTGCACCTTGATGAACACTGGCCAGATAGTTTCTGTGTGGTCTaGGGACTCCTCCCTCAGAGT | + |
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Preference number: 2 (lower is better) Translates to: KPSLHVAETVHLDEHWPDSFCVV*GLLPQS Trigger: ACTCTGAGGGAGGAGTCCTCAGACCACACAGAAACT...ATCTGGCCAGTGTTCATCAAGGTGCACTGTTTCTGCAACATGCAGGCTGGGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044224.5 |
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| 3UTR-3UTR GCA 90 bp | AAACCCAGCCTGCATGTTGCAGAAACAGTGCACCTTGATGAACACTGGCCAGATGGCTCCAGGGCCACATaGACTGCTGAAAAGTTTCTG | + |
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Preference number: 2 (lower is better) Translates to: KPSLHVAETVHLDEHWPDGSRAT*TAEKFL Trigger: CAGAAACTTTTCAGCAGTGCATGTGGCCCTGGAGCC...ATCTGGCCAGTGTTCATCAAGGTGCACTGTTTCTGCAACATGCAGGCTGGGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044224.5 |
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| 3UTR CAA 90 bp | CCCCCTCATGGCTTGCTGTGGTTTGTTGATGATGATCAGCCACTATaGGACATAACCTCCCAACAGGTGAACAGATGGAAGTCGAGCTTG | + |
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Preference number: 2 (lower is better) Translates to: PPHGLLWFVDDDQPL*DITSQQVNRWKSSL Trigger: CAAGCTCGACTTCCATCTGTTCACCTGTTGGGAGGTTATGTCCAATAGTGGCTGATCATCATCAACAAACCACAGCAAGCCATGAGGGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044224.5 |
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| 3UTR CCA 72 bp | AGGCAGGGATCAGAAGCCTGGAGTCTGATCACAGGTTaGATGCCCCTCGCTGGAGCCTTGAGTGCCATCCTG | + |
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Preference number: 3 (lower is better) Translates to: RQGSEAWSLITG*MPLAGALSAIL Trigger: CAGGATGGCACTCAAGGCTCCAGCGAGGGGCATCCAACCTGTGATCAGACTCCAGGCTTCTGATCCCTGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044224.5 |
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| 3UTR TCA 72 bp | GCCAGATTCCCAGGGCTCCAGGGCCACATGCACTGCTaGAAAGTTTCTGTGTGGTCTGAGGACTCCTCCCTC | + |
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Preference number: 3 (lower is better) Translates to: ARFPGLQGHMHC*KVSVWSEDSSL Trigger: GAGGGAGGAGTCCTCAGACCACACAGAAACTTTTCAGCAGTGCATGTGGCCCTGGAGCCCTGGGAATCTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044224.5 |
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| 3UTR GCA 72 bp | GAACACTGGCCAGATTCCCAGGGCTCCAGGGCCACATaGACTGCTGAAAAGTTTCTGTGTGGTCTGAGGACT | + |
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Preference number: 3 (lower is better) Translates to: EHWPDSQGSRAT*TAEKFLCGLRT Trigger: AGTCCTCAGACCACACAGAAACTTTTCAGCAGTGCATGTGGCCCTGGAGCCCTGGGAATCTGGCCAGTGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044224.5 |
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| 3UTR CCA 72 bp | CTGCATGTTGCAGAAACAGTGCACCTTGATGAACACTaGCCAGATTCCCAGGGCTCCAGGGCCACATGCACT | + |
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Preference number: 3 (lower is better) Translates to: LHVAETVHLDEH*PDSQGSRATCT Trigger: AGTGCATGTGGCCCTGGAGCCCTGGGAATCTGGCCAGTGTTCATCAAGGTGCACTGTTTCTGCAACATGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044224.5 |
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| 3UTR GCA 72 bp | ACTACCATAAACCCAGCCTGCATGTTGCAGAAACAGTaGACCTTGATGAACACTGGCCAGATTCCCAGGGCT | + |
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Preference number: 3 (lower is better) Translates to: TTINPACMLQKQ*TLMNTGQIPRA Trigger: AGCCCTGGGAATCTGGCCAGTGTTCATCAAGGTGCACTGTTTCTGCAACATGCAGGCTGGGTTTATGGTAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044224.5 |
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| 3UTR CAA 72 bp | CAGGCAGGGATCAGAAGCCTGGAGTCTGATCACAGGTaGGATGCCCCTCGCTGGAGCCTTGAGTGCCATCCT | + |
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Preference number: 4 (lower is better) Translates to: QAGIRSLESDHR*DAPRWSLECHP Trigger: AGGATGGCACTCAAGGCTCCAGCGAGGGGCATCCAACCTGTGATCAGACTCCAGGCTTCTGATCCCTGCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044224.5 |
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| CDS-3UTR TCA 90 bp | ACAGTGCACCTTGATGAACACTGGCCAGATTCCCAGGGCTCCAGGGCCACATGCCGGGGCAGCTCAGCTTaGAGCTCAGAAACCTGGAGT | + |
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Preference number: 4 (lower is better) Translates to: TVHLDEHWPDSQGSRATCRGSSA*SSETWS Trigger: ACTCCAGGTTTCTGAGCTTCAAGCTGAGCTGCCCCG...GCATGTGGCCCTGGAGCCCTGGGAATCTGGCCAGTGTTCATCAAGGTGCACTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044224.5 |
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| CDS-3UTR CCA 90 bp | GCAGCCTGTGAGGAAGGCTGTCCATGGGCAGGCAGGGATCAGAAGCCTGGAGTCAAGCACTGGGCTGTATaGAGTCCAGGGTTTTCGTGG | + |
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Preference number: 4 (lower is better) Translates to: AACEEGCPWAGRDQKPGVKHWAV*SPGFSW Trigger: CCACGAAAACCCTGGACTCCATACAGCCCAGTGCTT...GACTCCAGGCTTCTGATCCCTGCCTGCCCATGGACAGCCTTCCTCACAGGCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044224.5 |
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| CDS-3UTR TCA 90 bp | CAGACGAAGCAGCCTGTGAGGAAGGCTGTCCATGGGCAGGCAGGGATCAGAAGCTGGTGCACTCATGGGTaGGTTGGGCGTAGACTTTGT | + |
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Preference number: 4 (lower is better) Translates to: QTKQPVRKAVHGQAGIRSWCTHG*VGRRLC Trigger: ACAAAGTCTACGCCCAACTCACCCATGAGTGCACCA...GCTTCTGATCCCTGCCTGCCCATGGACAGCCTTCCTCACAGGCTGCTTCGTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044224.5 |
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| CDS-3UTR GCA 90 bp | GCAGCCTGTGAGGAAGGCTGTCCATGGGCAGGCAGGGATCAGAAGCCTGGAGTCCAAGTTCTAAGACAGTaGGGAAGCACTGGGCTGTAT | + |
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Preference number: 4 (lower is better) Translates to: AACEEGCPWAGRDQKPGVQVLRQ*GSTGLY Trigger: ATACAGCCCAGTGCTTCCGCACTGTCTTAGAACTTG...GACTCCAGGCTTCTGATCCCTGCCTGCCCATGGACAGCCTTCCTCACAGGCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044224.5 |
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| CDS-3UTR CCA 90 bp | ATGCCCCTCGCTGGAGCCTTGAGTGCCATCCTGTCTGTCCTCTCTAGGTCAAGGTCAGAAACCTGGAGTTaGGCTCCTTTGGGCTCTGGA | + |
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Preference number: 4 (lower is better) Translates to: MPLAGALSAILSVLSRSRSETWS*APLGSG Trigger: TCCAGAGCCCAAAGGAGCCCAACTCCAGGTTTCTGA...CCTTGACCTAGAGAGGACAGACAGGATGGCACTCAAGGCTCCAGCGAGGGGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044224.5 |
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| 3UTR CAA 72 bp | AGTCTGATCACAGGTTGGATGCCCCTCGCTGGAGCCTaGAGTGCCATCCTGTCTGTCCTCTCTAGGTCAAGG | + |
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Preference number: 4 (lower is better) Translates to: SLITGWMPLAGA*SAILSVLSRSR Trigger: CCTTGACCTAGAGAGGACAGACAGGATGGCACTCAAGGCTCCAGCGAGGGGCATCCAACCTGTGATCAGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044224.5 |
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| CDS-3UTR CCA 90 bp | CAGACGAAGCAGCCTGTGAGGAAGGCTGTCCATGGGCAGGCAGGGATCAGAAGCGGCTCCTTTGGGCTCTaGACCTCAAACTTGAGTTTA | + |
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Preference number: 4 (lower is better) Translates to: QTKQPVRKAVHGQAGIRSGSFGL*TSNLSL Trigger: TAAACTCAAGTTTGAGGTCCAGAGCCCAAAGGAGCC...GCTTCTGATCCCTGCCTGCCCATGGACAGCCTTCCTCACAGGCTGCTTCGTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044224.5 |
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| CDS-3UTR GCA 90 bp | CAGGCAGGGATCAGAAGCCTGGAGTCTGATCACAGGTTGGATGCCCCTCGCTGGCATAGTTTCTCTTGCTaGAACTGGAGTAGGTGTCTC | + |
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Preference number: 4 (lower is better) Translates to: QAGIRSLESDHRLDAPRWHSFSC*NWSRCL Trigger: GAGACACCTACTCCAGTTGCAGCAAGAGAAACTATG...CCAGCGAGGGGCATCCAACCTGTGATCAGACTCCAGGCTTCTGATCCCTGCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044224.5 |
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| CDS-3UTR CCA 90 bp | ACAGTGCACCTTGATGAACACTGGCCAGATTCCCAGGGCTCCAGGGCCACATGCCAGGGCATCATAGGCTaGCTGCACATCAAATTCCAA | + |
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Preference number: 4 (lower is better) Translates to: TVHLDEHWPDSQGSRATCQGIIG*LHIKFQ Trigger: TTGGAATTTGATGTGCAGCCAGCCTATGATGCCCTG...GCATGTGGCCCTGGAGCCCTGGGAATCTGGCCAGTGTTCATCAAGGTGCACTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044224.5 |
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| 3UTR CAA 72 bp | ATAAACCCAGCCTGCATGTTGCAGAAACAGTGCACCTaGATGAACACTGGCCAGATTCCCAGGGCTCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: INPACMLQKQCT*MNTGQIPRAPG Trigger: CCCTGGAGCCCTGGGAATCTGGCCAGTGTTCATCAAGGTGCACTGTTTCTGCAACATGCAGGCTGGGTTTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044224.5 |
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| CDS-3UTR TCA 90 bp | TGCACCTTGATGAACACTGGCCAGATTCCCAGGGCTCCAGGGCCACATGCACTGGTGTCAGGAAGGAGTTaGTCCTCTATGAACTTATCC | + |
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Preference number: 4 (lower is better) Translates to: CTLMNTGQIPRAPGPHALVSGRS*SSMNLS Trigger: GGATAAGTTCATAGAGGATCAACTCCTTCCTGACAC...CAGTGCATGTGGCCCTGGAGCCCTGGGAATCTGGCCAGTGTTCATCAAGGTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044224.5 |
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| CDS-3UTR TCA 90 bp | TTGATGAACACTGGCCAGATTCCCAGGGCTCCAGGGCCACATGCACTGCTGAAACCTCAGACCTGCCCTTaGGCACAGTGTATTCATTGT | + |
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Preference number: 4 (lower is better) Translates to: LMNTGQIPRAPGPHALLKPQTCP*AQCIHC Trigger: ACAATGAATACACTGTGCTCAAGGGCAGGTCTGAGG...TTTCAGCAGTGCATGTGGCCCTGGAGCCCTGGGAATCTGGCCAGTGTTCATCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044224.5 |
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| CDS-3UTR CCA 90 bp | CATGTTGCAGAAACAGTGCACCTTGATGAACACTGGCCAGATTCCCAGGGCTCCGGAGTTGGGCTCCTTTaGGCTCTGGACCTCAAACTT | + |
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Preference number: 4 (lower is better) Translates to: HVAETVHLDEHWPDSQGSGVGLL*ALDLKL Trigger: AAGTTTGAGGTCCAGAGCCCAAAGGAGCCCAACTCC...GGAGCCCTGGGAATCTGGCCAGTGTTCATCAAGGTGCACTGTTTCTGCAACATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044224.5 |
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| 3UTR CAA 72 bp | CTCTGTCCATCACAGTCTGACTCCCAGAGAACACTGTaGGAAGCTAAGGCAGACGAAGCAGCCTGTGAGGAA | + |
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Preference number: 4 (lower is better) Translates to: LCPSQSDSQRTL*EAKADEAACEE Trigger: TTCCTCACAGGCTGCTTCGTCTGCCTTAGCTTCCAACAGTGTTCTCTGGGAGTCAGACTGTGATGGACAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044224.5 |
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| CDS-3UTR TCA 90 bp | AAACAGTGCACCTTGATGAACACTGGCCAGATTCCCAGGGCTCCAGGGCCACATTGGAGTCAAAGGGCTTaGAGTGTCTTACTTCATACA | + |
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Preference number: 4 (lower is better) Translates to: KQCTLMNTGQIPRAPGPHWSQRA*SVLLHT Trigger: TGTATGAAGTAAGACACTTCAAGCCCTTTGACTCCA...ATGTGGCCCTGGAGCCCTGGGAATCTGGCCAGTGTTCATCAAGGTGCACTGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044224.5 |
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| CDS-3UTR CCA 90 bp | AAACCCAGCCTGCATGTTGCAGAAACAGTGCACCTTGATGAACACTGGCCAGATACATTCTTGTCTCTCTaGCATCACTTCCCAGGCTTC | + |
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Preference number: 4 (lower is better) Translates to: KPSLHVAETVHLDEHWPDTFLSL*HHFPGF Trigger: GAAGCCTGGGAAGTGATGCCAGAGAGACAAGAATGT...ATCTGGCCAGTGTTCATCAAGGTGCACTGTTTCTGCAACATGCAGGCTGGGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044224.5 |
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| CDS-3UTR TCA 90 bp | CAAGGTCTTACAGAAGAGGAGGACATGCCCCTGACTCTGGAGTCTCCTAGGCAGTCTGGACCTCAAACTTaGGTTTACATAGTTTCTCTT | + |
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Preference number: 4 (lower is better) Translates to: QGLTEEEDMPLTLESPRQSGPQT*VYIVSL Trigger: AAGAGAAACTATGTAAACTCAAGTTTGAGGTCCAGA...CTGCCTAGGAGACTCCAGAGTCAGGGGCATGTCCTCCTCTTCTGTAAGACCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044224.5 |
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| CDS-3UTR TCA 90 bp | AGTCGAGCTTGCGTTCTTCTCTGTCCATCACAGTCTGACTCCCAGAGAACACTGTTCTCCTTACACAGTTaGTACCAGTGCTTGACCAAA | + |
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Preference number: 4 (lower is better) Translates to: SRACVLLCPSQSDSQRTLFSLHS*YQCLTK Trigger: TTTGGTCAAGCACTGGTATCAACTGTGTAAGGAGAA...CAGTGTTCTCTGGGAGTCAGACTGTGATGGACAGAGAAGAACGCAAGCTCGACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044224.5 |
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| CDS-3UTR GCA 90 bp | CTGTGGTTTGTTGATGATGATCAGCCACTATTGGACATAACCTCCCAACAGGTGATTCCTTGTTGGGTCTaGTGGATCCAGGATCAGAGG | + |
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Preference number: 4 (lower is better) Translates to: LWFVDDDQPLLDITSQQVIPCWV*WIQDQR Trigger: CCTCTGATCCTGGATCCAGCAGACCCAACAAGGAAT...CACCTGTTGGGAGGTTATGTCCAATAGTGGCTGATCATCATCAACAAACCACAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044224.5 |
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| 3UTR CAA 72 bp | GGCTTGCTGTGGTTTGTTGATGATGATCAGCCACTATaGGACATAACCTCCCAACAGGTGAACAGATGGAAG | + |
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Preference number: 4 (lower is better) Translates to: GLLWFVDDDQPL*DITSQQVNRWK Trigger: CTTCCATCTGTTCACCTGTTGGGAGGTTATGTCCAATAGTGGCTGATCATCATCAACAAACCACAGCAAGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044224.5 |
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| 3UTR CAA 72 bp | TTATTTTCCTGCACTACCATAAACCCAGCCTGCATGTaGCAGAAACAGTGCACCTTGATGAACACTGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: LFSCTTINPACM*QKQCTLMNTGQ Trigger: CTGGCCAGTGTTCATCAAGGTGCACTGTTTCTGCAACATGCAGGCTGGGTTTATGGTAGTGCAGGAAAATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044224.5 |
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| CDS TCA 90 bp | CGGATGAGGTTCCAGAGCTTGGGCGCACGATACCTCAGGAAGCTCTaGTGGAGGTCGGTGAAGCAGATGGAGAACTCGCCCTCCTTCTCC | + |
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Preference number: 5 (lower is better) Translates to: RMRFQSLGARYLRKL*WRSVKQMENSPSFS Trigger: GGAGAAGGAGGGCGAGTTCTCCATCTGCTTCACCGACCTCCATCAGAGCTTCCTGAGGTATCGTGCGCCCAAGCTCTGGAACCTCATCCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044224.5 |
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| CDS-3UTR CAA 90 bp | ACAGTGCACCTTGATGAACACTGGCCAGATTCCCAGGGCTCCAGGGCCACATGCTCGGGGCAGCTCAGCTaGAAGCTCAGAAACCTGGAG | + |
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Preference number: 5 (lower is better) Translates to: TVHLDEHWPDSQGSRATCSGQLS*KLRNLE Trigger: CTCCAGGTTTCTGAGCTTCAAGCTGAGCTGCCCCGA...GCATGTGGCCCTGGAGCCCTGGGAATCTGGCCAGTGTTCATCAAGGTGCACTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044224.5 |
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| CDS TCA 90 bp | AGAGCTTGGGCGCACGATACCTCAGGAAGCTCTGATGGAGGTCGGTaGAGCAGATGGAGAACTCGCCCTCCTTCTCCAGTGTGGTGCACT | + |
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Preference number: 5 (lower is better) Translates to: RAWAHDTSGSSDGGR*SRWRTRPPSPVWCT Trigger: AGTGCACCACACTGGAGAAGGAGGGCGAGTTCTCCATCTGCTTCACCGACCTCCATCAGAGCTTCCTGAGGTATCGTGCGCCCAAGCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044224.5 |
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| CDS-3UTR CAA 90 bp | ACAGTGCACCTTGATGAACACTGGCCAGATTCCCAGGGCTCCAGGGCCACATGCCAGCCACATTCCTTGTaGGGTCTGCTGGATCCAGGA | + |
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Preference number: 5 (lower is better) Translates to: TVHLDEHWPDSQGSRATCQPHSL*GLLDPG Trigger: TCCTGGATCCAGCAGACCCAACAAGGAATGTGGCTG...GCATGTGGCCCTGGAGCCCTGGGAATCTGGCCAGTGTTCATCAAGGTGCACTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044224.5 |
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| CDS TCA 90 bp | GCACATCAAATTCCAACTCATGCTGGCGCTCGGGGCAGCTCAGCTTaGAGCTCAGAAACCTGGAGTTGGGCTCCTTTGGGCTCTGGACCT | + |
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Preference number: 5 (lower is better) Translates to: AHQIPTHAGARGSSA*SSETWSWAPLGSGP Trigger: AGGTCCAGAGCCCAAAGGAGCCCAACTCCAGGTTTCTGAGCTTCAAGCTGAGCTGCCCCGAGCGCCAGCATGAGTTGGAATTTGATGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044224.5 |
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| CDS-3UTR CAA 90 bp | CATGTTGCAGAAACAGTGCACCTTGATGAACACTGGCCAGATTCCCAGGGCTCCAGATCTGAGCCTCCTTaGCCAGCAGGTCCCATGCCT | + |
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Preference number: 5 (lower is better) Translates to: HVAETVHLDEHWPDSQGSRSEPP*PAGPMP Trigger: AGGCATGGGACCTGCTGGCAAAGGAGGCTCAGATCT...GGAGCCCTGGGAATCTGGCCAGTGTTCATCAAGGTGCACTGTTTCTGCAACATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044224.5 |
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| CDS-3UTR CAA 90 bp | ACAGTGCACCTTGATGAACACTGGCCAGATTCCCAGGGCTCCAGGGCCACATGCCAGGAAGACACATTCTaGTCTCTCTGGCATCACTTC | + |
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Preference number: 5 (lower is better) Translates to: TVHLDEHWPDSQGSRATCQEDTF*SLWHHF Trigger: GAAGTGATGCCAGAGAGACAAGAATGTGTCTTCCTG...GCATGTGGCCCTGGAGCCCTGGGAATCTGGCCAGTGTTCATCAAGGTGCACTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044224.5 |
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| CDS TCA 90 bp | AGATGGAGAACTCGCCCTCCTTCTCCAGTGTGGTGCACTCATGGGTaGGTTGGGCGTAGACTTTGTTGTAGTTACTGGAGTCAAAGGGCT | + |
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Preference number: 5 (lower is better) Translates to: RWRTRPPSPVWCTHG*VGRRLCCSYWSQRA Trigger: AGCCCTTTGACTCCAGTAACTACAACAAAGTCTACGCCCAACTCACCCATGAGTGCACCACACTGGAGAAGGAGGGCGAGTTCTCCATCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044224.5 |
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| CDS-3UTR CAA 90 bp | CTGTGGTTTGTTGATGATGATCAGCCACTATTGGACATAACCTCCCAACAGGTGAGGATGGGCGGCACCTaGGAAGCATCTCTCCATCAG | + |
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Preference number: 5 (lower is better) Translates to: LWFVDDDQPLLDITSQQVRMGGT*EASLHQ Trigger: CTGATGGAGAGATGCTTCCAAGGTGCCGCCCATCCT...CACCTGTTGGGAGGTTATGTCCAATAGTGGCTGATCATCATCAACAAACCACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044224.5 |
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| CDS-3UTR CAA 90 bp | AAACCCAGCCTGCATGTTGCAGAAACAGTGCACCTTGATGAACACTGGCCAGATGCCTCAGACCTGCCCTaGAGCACAGTGTATTCATTG | + |
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Preference number: 5 (lower is better) Translates to: KPSLHVAETVHLDEHWPDASDLP*STVYSL Trigger: CAATGAATACACTGTGCTCAAGGGCAGGTCTGAGGC...ATCTGGCCAGTGTTCATCAAGGTGCACTGTTTCTGCAACATGCAGGCTGGGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044224.5 |
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| CDS-3UTR CAA 90 bp | CTGTGGTTTGTTGATGATGATCAGCCACTATTGGACATAACCTCCCAACAGGTGCTCAGAAACCTGGAGTaGGGCTCCTTTGGGCTCTGG | + |
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Preference number: 5 (lower is better) Translates to: LWFVDDDQPLLDITSQQVLRNLE*GSFGLW Trigger: CCAGAGCCCAAAGGAGCCCAACTCCAGGTTTCTGAG...CACCTGTTGGGAGGTTATGTCCAATAGTGGCTGATCATCATCAACAAACCACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044224.5 |
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| CDS-3UTR CAA 90 bp | ACCATAAACCCAGCCTGCATGTTGCAGAAACAGTGCACCTTGATGAACACTGGCAACCAGCCACATTCCTaGTTGGGTCTGCTGGATCCA | + |
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Preference number: 5 (lower is better) Translates to: TINPACMLQKQCTLMNTGNQPHS*LGLLDP Trigger: TGGATCCAGCAGACCCAACAAGGAATGTGGCTGGTT...GCCAGTGTTCATCAAGGTGCACTGTTTCTGCAACATGCAGGCTGGGTTTATGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044224.5 |
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| CDS-3UTR CAA 90 bp | CTGTGGTTTGTTGATGATGATCAGCCACTATTGGACATAACCTCCCAACAGGTGTGGAGTTGGGCTCCTTaGGGCTCTGGACCTCAAACT | + |
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Preference number: 5 (lower is better) Translates to: LWFVDDDQPLLDITSQQVWSWAP*GSGPQT Trigger: AGTTTGAGGTCCAGAGCCCAAAGGAGCCCAACTCCA...CACCTGTTGGGAGGTTATGTCCAATAGTGGCTGATCATCATCAACAAACCACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044224.5 |
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| CDS TCA 90 bp | ATGTCTGCTCTGAGCTCAGTAAGGAAGGTGGTGTCAGGAAGGAGTTaGTCCTCTATGAACTTATCCAGCCTCCAGATTGGGGTTCTGAAG | + |
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Preference number: 5 (lower is better) Translates to: MSALSSVRKVVSGRS*SSMNLSSLQIGVLK Trigger: CTTCAGAACCCCAATCTGGAGGCTGGATAAGTTCATAGAGGATCAACTCCTTCCTGACACCACCTTCCTTACTGAGCTCAGAGCAGACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044224.5 |
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| CDS GCA 90 bp | TTGGAAGCATCTCTCCATCAGGAAAGCACTTATGGAGTCGATGTCTaGTCTGAGCTCAGTAAGGAAGGTGGTGTCAGGAAGGAGTTGATC | + |
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Preference number: 5 (lower is better) Translates to: LEASLHQESTYGVDV*SELSKEGGVRKELI Trigger: GATCAACTCCTTCCTGACACCACCTTCCTTACTGAGCTCAGAGCAGACATCGACTCCATAAGTGCTTTCCTGATGGAGAGATGCTTCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044224.5 |
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| CDS CCA 90 bp | CTCAGCTTGAAGCTCAGAAACCTGGAGTTGGGCTCCTTTGGGCTCTaGACCTCAAACTTGAGTTTACATAGTTTCTCTTGCTGCAACTGG | + |
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Preference number: 5 (lower is better) Translates to: LSLKLRNLELGSFGL*TSNLSLHSFSCCNW Trigger: CCAGTTGCAGCAAGAGAAACTATGTAAACTCAAGTTTGAGGTCCAGAGCCCAAAGGAGCCCAACTCCAGGTTTCTGAGCTTCAAGCTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044224.5 |
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| CDS-3UTR CAA 90 bp | GTGCCATCCTGTCTGTCCTCTCTAGGTCAAGGTCTTACAGAAGAGGAGGACATGCTTCTCCTTACACAGTaGATACCAGTGCTTGACCAA | + |
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Preference number: 5 (lower is better) Translates to: VPSCLSSLGQGLTEEEDMLLLTQ*IPVLDQ Trigger: TTGGTCAAGCACTGGTATCAACTGTGTAAGGAGAAG...CATGTCCTCCTCTTCTGTAAGACCTTGACCTAGAGAGGACAGACAGGATGGCAC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044224.5 |
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| CDS-3UTR CAA 90 bp | AAACCCAGCCTGCATGTTGCAGAAACAGTGCACCTTGATGAACACTGGCCAGATCTGGAGTCAAAGGGCTaGAAGTGTCTTACTTCATAC | + |
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Preference number: 5 (lower is better) Translates to: KPSLHVAETVHLDEHWPDLESKG*KCLTSY Trigger: GTATGAAGTAAGACACTTCAAGCCCTTTGACTCCAG...ATCTGGCCAGTGTTCATCAAGGTGCACTGTTTCTGCAACATGCAGGCTGGGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044224.5 |
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| CDS-3UTR CAA 90 bp | TCCTGCACTACCATAAACCCAGCCTGCATGTTGCAGAAACAGTGCACCTTGATGCGAAGCCGTTTGTACTaGGTGACAAGTTCTAAGACA | + |
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Preference number: 5 (lower is better) Translates to: SCTTINPACMLQKQCTLMRSRLY*VTSSKT Trigger: TGTCTTAGAACTTGTCACCAAGTACAAACGGCTTCG...CATCAAGGTGCACTGTTTCTGCAACATGCAGGCTGGGTTTATGGTAGTGCAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044224.5 |
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| CDS-3UTR CAA 90 bp | ACAGATGGAAGTCGAGCTTGCGTTCTTCTCTGTCCATCACAGTCTGACTCCCAGCTCTGGACCTCAAACTaGAGTTTACATAGTTTCTCT | + |
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Preference number: 5 (lower is better) Translates to: TDGSRACVLLCPSQSDSQLWTSN*SLHSFS Trigger: AGAGAAACTATGTAAACTCAAGTTTGAGGTCCAGAG...CTGGGAGTCAGACTGTGATGGACAGAGAAGAACGCAAGCTCGACTTCCATCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044224.5 |
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| CDS GCA 90 bp | TCCTTTGGGCTCTGGACCTCAAACTTGAGTTTACATAGTTTCTCTTaGTGCAACTGGAGTAGGTGTCTCCAAATTTCCTCAATGAACACT | + |
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Preference number: 5 (lower is better) Translates to: SFGLWTSNLSLHSFS*CNWSRCLQISSMNT Trigger: AGTGTTCATTGAGGAAATTTGGAGACACCTACTCCAGTTGCAGCAAGAGAAACTATGTAAACTCAAGTTTGAGGTCCAGAGCCCAAAGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044224.5 |
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| CDS CAA 90 bp | GGCGTACTGTGGAGGCAGCGGCCCCCTCAGCTTCTCCTTACACAGTaGATACCAGTGCTTGACCAAACGGATGAGGTTCCAGAGCTTGGG | + |
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Preference number: 6 (lower is better) Translates to: GVLWRQRPPQLLLTQ*IPVLDQTDEVPELG Trigger: CCCAAGCTCTGGAACCTCATCCGTTTGGTCAAGCACTGGTATCAACTGTGTAAGGAGAAGCTGAGGGGGCCGCTGCCTCCACAGTACGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044224.5 |
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| CDS TCA 72 bp | GCGCACGATACCTCAGGAAGCTCTGATGGAGGTCGGTaGAGCAGATGGAGAACTCGCCCTCCTTCTCCAGTG | + |
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Preference number: 6 (lower is better) Translates to: AHDTSGSSDGGR*SRWRTRPPSPV Trigger: CACTGGAGAAGGAGGGCGAGTTCTCCATCTGCTTCACCGACCTCCATCAGAGCTTCCTGAGGTATCGTGCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044224.5 |
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| CDS TCA 72 bp | TTCCAGAGCTTGGGCGCACGATACCTCAGGAAGCTCTaGTGGAGGTCGGTGAAGCAGATGGAGAACTCGCCC | + |
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Preference number: 6 (lower is better) Translates to: FQSLGARYLRKL*WRSVKQMENSP Trigger: GGGCGAGTTCTCCATCTGCTTCACCGACCTCCATCAGAGCTTCCTGAGGTATCGTGCGCCCAAGCTCTGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044224.5 |
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| CDS TCA 72 bp | GGAGGCAGCGGCCCCCTCAGCTTCTCCTTACACAGTTaGTACCAGTGCTTGACCAAACGGATGAGGTTCCAG | + |
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Preference number: 6 (lower is better) Translates to: GGSGPLSFSLHS*YQCLTKRMRFQ Trigger: CTGGAACCTCATCCGTTTGGTCAAGCACTGGTATCAACTGTGTAAGGAGAAGCTGAGGGGGCCGCTGCCTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044224.5 |
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| CDS CAA 72 bp | AATTCCAACTCATGCTGGCGCTCGGGGCAGCTCAGCTaGAAGCTCAGAAACCTGGAGTTGGGCTCCTTTGGG | + |
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Preference number: 6 (lower is better) Translates to: NSNSCWRSGQLS*KLRNLELGSFG Trigger: CCCAAAGGAGCCCAACTCCAGGTTTCTGAGCTTCAAGCTGAGCTGCCCCGAGCGCCAGCATGAGTTGGAATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044224.5 |
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| CDS CAA 72 bp | TGGAGGCAGCGGCCCCCTCAGCTTCTCCTTACACAGTaGATACCAGTGCTTGACCAAACGGATGAGGTTCCA | + |
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Preference number: 6 (lower is better) Translates to: WRQRPPQLLLTQ*IPVLDQTDEVP Trigger: TGGAACCTCATCCGTTTGGTCAAGCACTGGTATCAACTGTGTAAGGAGAAGCTGAGGGGGCCGCTGCCTCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044224.5 |
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| CDS CCA 72 bp | ACAAGTTCTAAGACAGTGCGGAAGCACTGGGCTGTATaGAGTCCAGGGTTTTCGTGGATCCCGTATTCCCAG | + |
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Preference number: 6 (lower is better) Translates to: TSSKTVRKHWAV*SPGFSWIPYSQ Trigger: CTGGGAATACGGGATCCACGAAAACCCTGGACTCCATACAGCCCAGTGCTTCCGCACTGTCTTAGAACTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044224.5 |
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| CDS CCA 72 bp | TACTTGGTGACAAGTTCTAAGACAGTGCGGAAGCACTaGGCTGTATGGAGTCCAGGGTTTTCGTGGATCCCG | + |
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Preference number: 6 (lower is better) Translates to: YLVTSSKTVRKH*AVWSPGFSWIP Trigger: CGGGATCCACGAAAACCCTGGACTCCATACAGCCCAGTGCTTCCGCACTGTCTTAGAACTTGTCACCAAGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044224.5 |
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| CDS CAA 90 bp | GGAGAACTCGCCCTCCTTCTCCAGTGTGGTGCACTCATGGGTGAGTaGGGCGTAGACTTTGTTGTAGTTACTGGAGTCAAAGGGCTTGAA | + |
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Preference number: 6 (lower is better) Translates to: GELALLLQCGALMGE*GVDFVVVTGVKGLE Trigger: TTCAAGCCCTTTGACTCCAGTAACTACAACAAAGTCTACGCCCAACTCACCCATGAGTGCACCACACTGGAGAAGGAGGGCGAGTTCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044224.5 |
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| CDS TCA 72 bp | CTGAGCTCAGTAAGGAAGGTGGTGTCAGGAAGGAGTTaGTCCTCTATGAACTTATCCAGCCTCCAGATTGGG | + |
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Preference number: 6 (lower is better) Translates to: LSSVRKVVSGRS*SSMNLSSLQIG Trigger: CCCAATCTGGAGGCTGGATAAGTTCATAGAGGATCAACTCCTTCCTGACACCACCTTCCTTACTGAGCTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044224.5 |
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| CDS TCA 72 bp | ACCATGTCCAGTAGATTCGAAGCCGTTTGTACTTGGTaGCAAGTTCTAAGACAGTGCGGAAGCACTGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: TMSSRFEAVCTW*QVLRQCGSTGL Trigger: CAGCCCAGTGCTTCCGCACTGTCTTAGAACTTGTCACCAAGTACAAACGGCTTCGAATCTACTGGACATGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044224.5 |
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| CDS CAA 90 bp | GATGTCTGCTCTGAGCTCAGTAAGGAAGGTGGTGTCAGGAAGGAGTaGATCCTCTATGAACTTATCCAGCCTCCAGATTGGGGTTCTGAA | + |
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Preference number: 6 (lower is better) Translates to: DVCSELSKEGGVRKE*ILYELIQPPDWGSE Trigger: TTCAGAACCCCAATCTGGAGGCTGGATAAGTTCATAGAGGATCAACTCCTTCCTGACACCACCTTCCTTACTGAGCTCAGAGCAGACATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044224.5 |
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| CDS TCA 72 bp | TCATGGTTCGTAAAGAAAGTCGAATCTATCCAGATCTaGGCCTCCTTTGCCAGCAGGTCCCATGCCTGTAAG | + |
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Preference number: 6 (lower is better) Translates to: SWFVKKVESIQI*ASFASRSHACK Trigger: CTTACAGGCATGGGACCTGCTGGCAAAGGAGGCTCAGATCTGGATAGATTCGACTTTCTTTACGAACCATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044224.5 |
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| CDS CCA 72 bp | CTTGAAGTGTCTTACTTCATACAGGGCATCATAGGCTaGCTGCACATCAAATTCCAACTCATGCTGGCGCTC | + |
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Preference number: 6 (lower is better) Translates to: LEVSYFIQGIIG*LHIKFQLMLAL Trigger: GAGCGCCAGCATGAGTTGGAATTTGATGTGCAGCCAGCCTATGATGCCCTGTATGAAGTAAGACACTTCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044224.5 |
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| CDS CAA 72 bp | CTGGAGTTGGGCTCCTTTGGGCTCTGGACCTCAAACTaGAGTTTACATAGTTTCTCTTGCTGCAACTGGAGT | + |
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Preference number: 6 (lower is better) Translates to: LELGSFGLWTSN*SLHSFSCCNWS Trigger: ACTCCAGTTGCAGCAAGAGAAACTATGTAAACTCAAGTTTGAGGTCCAGAGCCCAAAGGAGCCCAACTCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044224.5 |
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| CDS TCA 72 bp | TGGAGTTGGGCTCCTTTGGGCTCTGGACCTCAAACTTaGGTTTACATAGTTTCTCTTGCTGCAACTGGAGTA | + |
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Preference number: 6 (lower is better) Translates to: WSWAPLGSGPQT*VYIVSLAATGV Trigger: TACTCCAGTTGCAGCAAGAGAAACTATGTAAACTCAAGTTTGAGGTCCAGAGCCCAAAGGAGCCCAACTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044224.5 |
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| CDS TCA 72 bp | CGTAGACTTTGTTGTAGTTACTGGAGTCAAAGGGCTTaGAGTGTCTTACTTCATACAGGGCATCATAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: RRLCCSYWSQRA*SVLLHTGHHRL Trigger: CAGCCTATGATGCCCTGTATGAAGTAAGACACTTCAAGCCCTTTGACTCCAGTAACTACAACAAAGTCTACG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044224.5 |
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| CDS CAA 72 bp | TTTGATCTGTCCCTGCAGGTAGTCAGAGATCTCGTGTaGAAAGTCATAACACCATGTCCAGTAGATTCGAAG | + |
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Preference number: 6 (lower is better) Translates to: FDLSLQVVRDLV*KVITPCPVDSK Trigger: CTTCGAATCTACTGGACATGGTGTTATGACTTTCAACACGAGATCTCTGACTACCTGCAGGGACAGATCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044224.5 |
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| CDS GCA 72 bp | CTCTGGACCTCAAACTTGAGTTTACATAGTTTCTCTTaGTGCAACTGGAGTAGGTGTCTCCAAATTTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: LWTSNLSLHSFS*CNWSRCLQISS Trigger: TGAGGAAATTTGGAGACACCTACTCCAGTTGCAGCAAGAGAAACTATGTAAACTCAAGTTTGAGGTCCAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044224.5 |
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| CDS TCA 72 bp | CAAATTTCCTCAATGAACACTACCTGTCCGTTGAACTaGTCCTCAAAGCTTGTGAGATTGATAAGGAACACC | + |
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Preference number: 6 (lower is better) Translates to: QISSMNTTCPLN*SSKLVRLIRNT Trigger: GGTGTTCCTTATCAATCTCACAAGCTTTGAGGATCAGTTCAACGGACAGGTAGTGTTCATTGAGGAAATTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044224.5 |
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| CDS CCA 72 bp | TCAAACTTGAGTTTACATAGTTTCTCTTGCTGCAACTaGAGTAGGTGTCTCCAAATTTCCTCAATGAACACT | + |
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Preference number: 6 (lower is better) Translates to: SNLSLHSFSCCN*SRCLQISSMNT Trigger: AGTGTTCATTGAGGAAATTTGGAGACACCTACTCCAGTTGCAGCAAGAGAAACTATGTAAACTCAAGTTTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044224.5 |
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