Pregenerated sensors for OAS1C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000001166Ensembl transcript IDs: ENSMUST00000117193.8
Found 96 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGCTGTGGACCTCAGCCTGCATGCTGCAGAATCAGTGCACCACGATaGACGCTGGCCAGATTCCCAGGGCTCCAGGGTCATGTGTGGTTG | + |
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Preference number: 1 (lower is better) Translates to: CCGPQPACCRISAPR*TLARFPGLQGHVWL Trigger: CAACCACACATGACCCTGGAGCCCTGGGAATCTGGCCAGCGTGCATCGTGGTGCACTGATTCTGCAGCATGCAGGCTGAGGTCCACAGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| 3UTR GCA 90 bp | TTTCCCACACTGCTGTGGACCTCAGCCTGCATGCTGCAGAATCAGTaGACCACGATGCACGCTGGCCAGATTCCCAGGGCTCCAGGGTCA | + |
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Preference number: 1 (lower is better) Translates to: FPTLLWTSACMLQNQ*TTMHAGQIPRAPGS Trigger: TGACCCTGGAGCCCTGGGAATCTGGCCAGCGTGCATCGTGGTGCACTGATTCTGCAGCATGCAGGCTGAGGTCCACAGCAGTGTGGGAAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| 3UTR CCA 90 bp | GACCTCAGCCTGCATGCTGCAGAATCAGTGCACCACGATGCACGCTaGCCAGATTCCCAGGGCTCCAGGGTCATGTGTGGTTGGAGAACA | + |
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Preference number: 1 (lower is better) Translates to: DLSLHAAESVHHDAR*PDSQGSRVMCGWRT Trigger: TGTTCTCCAACCACACATGACCCTGGAGCCCTGGGAATCTGGCCAGCGTGCATCGTGGTGCACTGATTCTGCAGCATGCAGGCTGAGGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| 3UTR CCA 90 bp | GGGATCAGAAGCCTGGAGTCTGATCACAGGCTGGATGCCCCTCACTaGAGCCTTGAGTGCCATCCTGTCCTCTCTAGGTCAAGGTCTTGC | + |
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Preference number: 1 (lower is better) Translates to: GIRSLESDHRLDAPH*SLECHPVLSRSRSC Trigger: GCAAGACCTTGACCTAGAGAGGACAGGATGGCACTCAAGGCTCCAGTGAGGGGCATCCAGCCTGTGATCAGACTCCAGGCTTCTGATCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| 3UTR GCA 90 bp | CACTGGAGCCTTGAGTGCCATCCTGTCCTCTCTAGGTCAAGGTCTTaGAGCAGAGGAAGGTATGCCCCTGACTCTGGAGCCTTCAGAGCA | + |
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Preference number: 1 (lower is better) Translates to: HWSLECHPVLSRSRS*SRGRYAPDSGAFRA Trigger: TGCTCTGAAGGCTCCAGAGTCAGGGGCATACCTTCCTCTGCTGCAAGACCTTGACCTAGAGAGGACAGGATGGCACTCAAGGCTCCAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| 3UTR GCA 90 bp | ATTGCACATAGTTTCCCACACTGCTGTGGACCTCAGCCTGCATGCTaGAGAATCAGTGCACCACGATGCACGCTGGCCAGATTCCCAGGG | + |
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Preference number: 1 (lower is better) Translates to: IAHSFPHCCGPQPAC*RISAPRCTLARFPG Trigger: CCCTGGGAATCTGGCCAGCGTGCATCGTGGTGCACTGATTCTGCAGCATGCAGGCTGAGGTCCACAGCAGTGTGGGAAACTATGTGCAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| 3UTR CCA 90 bp | CCACGATGCACGCTGGCCAGATTCCCAGGGCTCCAGGGTCATGTGTaGTTGGAGAACAGTTTCTGTGTGGGATGGGGAAGGCCTAAAATT | + |
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Preference number: 1 (lower is better) Translates to: PRCTLARFPGLQGHV*LENSFCVGWGRPKI Trigger: AATTTTAGGCCTTCCCCATCCCACACAGAAACTGTTCTCCAACCACACATGACCCTGGAGCCCTGGGAATCTGGCCAGCGTGCATCGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| 3UTR GCA 90 bp | CAAATTGCACATAGTTTCCCACACTGCTGTGGACCTCAGCCTGCATaGTGCAGAATCAGTGCACCACGATGCACGCTGGCCAGATTCCCA | + |
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Preference number: 1 (lower is better) Translates to: QIAHSFPHCCGPQPA*CRISAPRCTLARFP Trigger: TGGGAATCTGGCCAGCGTGCATCGTGGTGCACTGATTCTGCAGCATGCAGGCTGAGGTCCACAGCAGTGTGGGAAACTATGTGCAATTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| 3UTR CCA 90 bp | TCCCCCATGGCTTGCTGTGGTTTGTTGATGACAATCAGCCACTGTTaGACAGAACCTCCCAACAGGTGGACAGATGGAAGTCGAGCTTGC | + |
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Preference number: 1 (lower is better) Translates to: SPMACCGLLMTISHC*TEPPNRWTDGSRAC Trigger: GCAAGCTCGACTTCCATCTGTCCACCTGTTGGGAGGTTCTGTCCAACAGTGGCTGATTGTCATCAACAAACCACAGCAAGCCATGGGGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| 3UTR GCA 90 bp | TGTTGGACAGAACCTCCCAACAGGTGGACAGATGGAAGTCGAGCTTaGGTTCTTCTCTGTCCATCACAGTCTGACTCCCAGAGAACACTG | + |
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Preference number: 1 (lower is better) Translates to: CWTEPPNRWTDGSRA*VLLCPSQSDSQRTL Trigger: CAGTGTTCTCTGGGAGTCAGACTGTGATGGACAGAGAAGAACGCAAGCTCGACTTCCATCTGTCCACCTGTTGGGAGGTTCTGTCCAACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| 3UTR CCA 90 bp | TTGTTGATGACAATCAGCCACTGTTGGACAGAACCTCCCAACAGGTaGACAGATGGAAGTCGAGCTTGCGTTCTTCTCTGTCCATCACAG | + |
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Preference number: 1 (lower is better) Translates to: LLMTISHCWTEPPNR*TDGSRACVLLCPSQ Trigger: CTGTGATGGACAGAGAAGAACGCAAGCTCGACTTCCATCTGTCCACCTGTTGGGAGGTTCTGTCCAACAGTGGCTGATTGTCATCAACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| 3UTR CCA 90 bp | ATTTTGTCACAGGAGAATGGACAGCAGGAGCCATGGATTCTAGTCTaGGTTTCTTGCATCAGAGATCTAGAAGGATCCCAAGCTACCCAA | + |
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Preference number: 1 (lower is better) Translates to: ILSQENGQQEPWILV*VSCIRDLEGSQATQ Trigger: TTGGGTAGCTTGGGATCCTTCTAGATCTCTGATGCAAGAAACCCAGACTAGAATCCATGGCTCCTGCTGTCCATTCTCCTGTGACAAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| 3UTR-3UTR CCA 90 bp | TGCAGAATCAGTGCACCACGATGCACGCTGGCCAGATTCCCAGGGCTCCAGGGTCAGGGATCAGAAGCCTaGAGTCTGATCACAGGCTGG | + |
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Preference number: 2 (lower is better) Translates to: CRISAPRCTLARFPGLQGQGSEA*SLITGW Trigger: CCAGCCTGTGATCAGACTCCAGGCTTCTGATCCCTG...ACCCTGGAGCCCTGGGAATCTGGCCAGCGTGCATCGTGGTGCACTGATTCTGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| 3UTR CAA 90 bp | GAAGCCTGGAGTCTGATCACAGGCTGGATGCCCCTCACTGGAGCCTaGAGTGCCATCCTGTCCTCTCTAGGTCAAGGTCTTGCAGCAGAG | + |
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Preference number: 2 (lower is better) Translates to: EAWSLITGWMPLTGA*SAILSSLGQGLAAE Trigger: CTCTGCTGCAAGACCTTGACCTAGAGAGGACAGGATGGCACTCAAGGCTCCAGTGAGGGGCATCCAGCCTGTGATCAGACTCCAGGCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| 3UTR-3UTR CCA 90 bp | GGTCACAAATTGCACATAGTTTCCCACACTGCTGTGGACCTCAGCCTGCATGCTCACCACGATGCACGCTaGCCAGATTCCCAGGGCTCC | + |
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Preference number: 2 (lower is better) Translates to: GHKLHIVSHTAVDLSLHAHHDAR*PDSQGS Trigger: GGAGCCCTGGGAATCTGGCCAGCGTGCATCGTGGTG...AGCATGCAGGCTGAGGTCCACAGCAGTGTGGGAAACTATGTGCAATTTGTGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| 3UTR CAA 90 bp | TCCTTCTCTCAGAGTGCACCCTCCCCCATGGCTTGCTGTGGTTTGTaGATGACAATCAGCCACTGTTGGACAGAACCTCCCAACAGGTGG | + |
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Preference number: 2 (lower is better) Translates to: SFSQSAPSPMACCGL*MTISHCWTEPPNRW Trigger: CCACCTGTTGGGAGGTTCTGTCCAACAGTGGCTGATTGTCATCAACAAACCACAGCAAGCCATGGGGGAGGGTGCACTCTGAGAGAAGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| 3UTR-3UTR GCA 90 bp | GCCACTGTTGGACAGAACCTCCCAACAGGTGGACAGATGGAAGTCGAGCTTGCGTCTAGGTCAAGGTCTTaGAGCAGAGGAAGGTATGCC | + |
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Preference number: 2 (lower is better) Translates to: ATVGQNLPTGGQMEVELASRSRS*SRGRYA Trigger: GGCATACCTTCCTCTGCTGCAAGACCTTGACCTAGA...CGCAAGCTCGACTTCCATCTGTCCACCTGTTGGGAGGTTCTGTCCAACAGTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| 3UTR CAA 90 bp | CCCTCACACAGACAGCTAAGCTTTCAAGTCATCACTGGTCACAAATaGCACATAGTTTCCCACACTGCTGTGGACCTCAGCCTGCATGCT | + |
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Preference number: 2 (lower is better) Translates to: PSHRQLSFQVITGHK*HIVSHTAVDLSLHA Trigger: AGCATGCAGGCTGAGGTCCACAGCAGTGTGGGAAACTATGTGCAATTTGTGACCAGTGATGACTTGAAAGCTTAGCTGTCTGTGTGAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| 3UTR CAA 90 bp | TGGTTGGAGAACAGTTTCTGTGTGGGATGGGGAAGGCCTAAAATTTaGTCACAGGAGAATGGACAGCAGGAGCCATGGATTCTAGTCTGG | + |
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Preference number: 2 (lower is better) Translates to: WLENSFCVGWGRPKI*SQENGQQEPWILVW Trigger: CCAGACTAGAATCCATGGCTCCTGCTGTCCATTCTCCTGTGACAAAATTTTAGGCCTTCCCCATCCCACACAGAAACTGTTCTCCAACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| 3UTR-3UTR TCA 90 bp | TACCCAACATCAATACGTGTAACAGTTTGGTTTTTCTCTGTCCACCCCTTTCTGAGGAAGGTATGCCCCTaGCTCTGGAGCCTTCAGAGC | + |
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Preference number: 2 (lower is better) Translates to: YPTSIRVTVWFFSVHPFLRKVCP*LWSLQS Trigger: GCTCTGAAGGCTCCAGAGTCAGGGGCATACCTTCCT...CAGAAAGGGGTGGACAGAGAAAAACCAAACTGTTACACGTATTGATGTTGGGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| 3UTR-3UTR CCA 90 bp | GAGTTCGAGTCAGTGCATTGTGATTTAATTCAGTGCTTCAAATCTCACCCTCACAGTCTGATCACAGGCTaGATGCCCCTCACTGGAGCC | + |
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Preference number: 2 (lower is better) Translates to: EFESVHCDLIQCFKSHPHSLITG*MPLTGA Trigger: GGCTCCAGTGAGGGGCATCCAGCCTGTGATCAGACT...GTGAGGGTGAGATTTGAAGCACTGAATTAAATCACAATGCACTGACTCGAACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| 3UTR-3UTR CCA 90 bp | ACTGGTCACAAATTGCACATAGTTTCCCACACTGCTGTGGACCTCAGCCTGCATAGAACAGTTTCTGTGTaGGATGGGGAAGGCCTAAAA | + |
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Preference number: 2 (lower is better) Translates to: TGHKLHIVSHTAVDLSLHRTVSV*DGEGLK Trigger: TTTTAGGCCTTCCCCATCCCACACAGAAACTGTTCT...ATGCAGGCTGAGGTCCACAGCAGTGTGGGAAACTATGTGCAATTTGTGACCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| 3UTR-3UTR CCA 90 bp | TTGCATCAGAGATCTAGAAGGATCCCAAGCTACCCAACATCAATACGTGTAACAACAATCAGCCACTGTTaGACAGAACCTCCCAACAGG | + |
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Preference number: 2 (lower is better) Translates to: LHQRSRRIPSYPTSIRVTTISHC*TEPPNR Trigger: CCTGTTGGGAGGTTCTGTCCAACAGTGGCTGATTGT...TGTTACACGTATTGATGTTGGGTAGCTTGGGATCCTTCTAGATCTCTGATGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| 3UTR-3UTR TCA 90 bp | AGAAGGATCCCAAGCTACCCAACATCAATACGTGTAACAGTTTGGTTTTTCTCTCTGTCCATCACAGTCTaGCTCCCAGAGAACACTGTT | + |
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Preference number: 2 (lower is better) Translates to: RRIPSYPTSIRVTVWFFSLSITV*LPENTV Trigger: AACAGTGTTCTCTGGGAGTCAGACTGTGATGGACAG...AGAGAAAAACCAAACTGTTACACGTATTGATGTTGGGTAGCTTGGGATCCTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| 3UTR GCA 72 bp | CCTCAGCCTGCATGCTGCAGAATCAGTGCACCACGATaGACGCTGGCCAGATTCCCAGGGCTCCAGGGTCAT | + |
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Preference number: 3 (lower is better) Translates to: PQPACCRISAPR*TLARFPGLQGH Trigger: ATGACCCTGGAGCCCTGGGAATCTGGCCAGCGTGCATCGTGGTGCACTGATTCTGCAGCATGCAGGCTGAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| 3UTR GCA 72 bp | CTGCTGTGGACCTCAGCCTGCATGCTGCAGAATCAGTaGACCACGATGCACGCTGGCCAGATTCCCAGGGCT | + |
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Preference number: 3 (lower is better) Translates to: LLWTSACMLQNQ*TTMHAGQIPRA Trigger: AGCCCTGGGAATCTGGCCAGCGTGCATCGTGGTGCACTGATTCTGCAGCATGCAGGCTGAGGTCCACAGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| 3UTR CCA 72 bp | CTGCATGCTGCAGAATCAGTGCACCACGATGCACGCTaGCCAGATTCCCAGGGCTCCAGGGTCATGTGTGGT | + |
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Preference number: 3 (lower is better) Translates to: LHAAESVHHDAR*PDSQGSRVMCG Trigger: ACCACACATGACCCTGGAGCCCTGGGAATCTGGCCAGCGTGCATCGTGGTGCACTGATTCTGCAGCATGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| 3UTR GCA 72 bp | GATCACAGGCTGGATGCCCCTCACTGGAGCCTTGAGTaGCATCCTGTCCTCTCTAGGTCAAGGTCTTGCAGC | + |
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Preference number: 3 (lower is better) Translates to: DHRLDAPHWSLE*HPVLSRSRSCS Trigger: GCTGCAAGACCTTGACCTAGAGAGGACAGGATGGCACTCAAGGCTCCAGTGAGGGGCATCCAGCCTGTGATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| 3UTR GCA 72 bp | AGTTTCCCACACTGCTGTGGACCTCAGCCTGCATGCTaGAGAATCAGTGCACCACGATGCACGCTGGCCAGA | + |
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Preference number: 3 (lower is better) Translates to: SFPHCCGPQPAC*RISAPRCTLAR Trigger: TCTGGCCAGCGTGCATCGTGGTGCACTGATTCTGCAGCATGCAGGCTGAGGTCCACAGCAGTGTGGGAAACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| 3UTR GCA 72 bp | CATAGTTTCCCACACTGCTGTGGACCTCAGCCTGCATaGTGCAGAATCAGTGCACCACGATGCACGCTGGCC | + |
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Preference number: 3 (lower is better) Translates to: HSFPHCCGPQPA*CRISAPRCTLA Trigger: GGCCAGCGTGCATCGTGGTGCACTGATTCTGCAGCATGCAGGCTGAGGTCCACAGCAGTGTGGGAAACTATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| 3UTR CCA 72 bp | AGCCTGGAGTCTGATCACAGGCTGGATGCCCCTCACTaGAGCCTTGAGTGCCATCCTGTCCTCTCTAGGTCA | + |
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Preference number: 3 (lower is better) Translates to: SLESDHRLDAPH*SLECHPVLSRS Trigger: TGACCTAGAGAGGACAGGATGGCACTCAAGGCTCCAGTGAGGGGCATCCAGCCTGTGATCAGACTCCAGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| 3UTR GCA 72 bp | CTTGAGTGCCATCCTGTCCTCTCTAGGTCAAGGTCTTaGAGCAGAGGAAGGTATGCCCCTGACTCTGGAGCC | + |
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Preference number: 3 (lower is better) Translates to: LECHPVLSRSRS*SRGRYAPDSGA Trigger: GGCTCCAGAGTCAGGGGCATACCTTCCTCTGCTGCAAGACCTTGACCTAGAGAGGACAGGATGGCACTCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| 3UTR GCA 72 bp | GAACCTCCCAACAGGTGGACAGATGGAAGTCGAGCTTaGGTTCTTCTCTGTCCATCACAGTCTGACTCCCAG | + |
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Preference number: 3 (lower is better) Translates to: EPPNRWTDGSRA*VLLCPSQSDSQ Trigger: CTGGGAGTCAGACTGTGATGGACAGAGAAGAACGCAAGCTCGACTTCCATCTGTCCACCTGTTGGGAGGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| 3UTR GCA 72 bp | GGTTCCTTCTCTCAGAGTGCACCCTCCCCCATGGCTTaGTGTGGTTTGTTGATGACAATCAGCCACTGTTGG | + |
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Preference number: 3 (lower is better) Translates to: GSFSQSAPSPMA*CGLLMTISHCW Trigger: CCAACAGTGGCTGATTGTCATCAACAAACCACAGCAAGCCATGGGGGAGGGTGCACTCTGAGAGAAGGAACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| 3UTR CCA 72 bp | CCACTGTTGGACAGAACCTCCCAACAGGTGGACAGATaGAAGTCGAGCTTGCGTTCTTCTCTGTCCATCACA | + |
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Preference number: 3 (lower is better) Translates to: PLLDRTSQQVDR*KSSLRSSLSIT Trigger: TGTGATGGACAGAGAAGAACGCAAGCTCGACTTCCATCTGTCCACCTGTTGGGAGGTTCTGTCCAACAGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| 3UTR CCA 72 bp | CTTCTCTCAGAGTGCACCCTCCCCCATGGCTTGCTGTaGTTTGTTGATGACAATCAGCCACTGTTGGACAGA | + |
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Preference number: 3 (lower is better) Translates to: LLSECTLPHGLL*FVDDNQPLLDR Trigger: TCTGTCCAACAGTGGCTGATTGTCATCAACAAACCACAGCAAGCCATGGGGGAGGGTGCACTCTGAGAGAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| 3UTR CCA 72 bp | ACAATCAGCCACTGTTGGACAGAACCTCCCAACAGGTaGACAGATGGAAGTCGAGCTTGCGTTCTTCTCTGT | + |
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Preference number: 3 (lower is better) Translates to: TISHCWTEPPNR*TDGSRACVLLC Trigger: ACAGAGAAGAACGCAAGCTCGACTTCCATCTGTCCACCTGTTGGGAGGTTCTGTCCAACAGTGGCTGATTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| 3UTR CCA 72 bp | TGGTTTTTCTCTGTCCACCCCTTTCTGGCAATTACCTaGGCCCATGTGGAGCTTGTAACACGTGCTCAAGGT | + |
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Preference number: 3 (lower is better) Translates to: WFFSVHPFLAIT*AHVELVTRAQG Trigger: ACCTTGAGCACGTGTTACAAGCTCCACATGGGCCCAGGTAATTGCCAGAAAGGGGTGGACAGAGAAAAACCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| 3UTR GCA 72 bp | CATCACTGGTCACAAATTGCACATAGTTTCCCACACTaGTGTGGACCTCAGCCTGCATGCTGCAGAATCAGT | + |
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Preference number: 3 (lower is better) Translates to: HHWSQIAHSFPH*CGPQPACCRIS Trigger: ACTGATTCTGCAGCATGCAGGCTGAGGTCCACAGCAGTGTGGGAAACTATGTGCAATTTGTGACCAGTGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| 3UTR CCA 72 bp | GCTTGCTGTGGTTTGTTGATGACAATCAGCCACTGTTaGACAGAACCTCCCAACAGGTGGACAGATGGAAGT | + |
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Preference number: 3 (lower is better) Translates to: ACCGLLMTISHC*TEPPNRWTDGS Trigger: ACTTCCATCTGTCCACCTGTTGGGAGGTTCTGTCCAACAGTGGCTGATTGTCATCAACAAACCACAGCAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| 3UTR-3UTR CAA 90 bp | TTGCATCAGAGATCTAGAAGGATCCCAAGCTACCCAACATCAATACGTGTAACAGACAATCAGCCACTGTaGGACAGAACCTCCCAACAG | + |
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Preference number: 3 (lower is better) Translates to: LHQRSRRIPSYPTSIRVTDNQPL*DRTSQQ Trigger: CTGTTGGGAGGTTCTGTCCAACAGTGGCTGATTGTC...TGTTACACGTATTGATGTTGGGTAGCTTGGGATCCTTCTAGATCTCTGATGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| 3UTR-3UTR CAA 90 bp | AGAAGGATCCCAAGCTACCCAACATCAATACGTGTAACAGTTTGGTTTTTCTCTACCCTCCCCCATGGCTaGCTGTGGTTTGTTGATGAC | + |
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Preference number: 3 (lower is better) Translates to: RRIPSYPTSIRVTVWFFSTLPHG*LWFVDD Trigger: GTCATCAACAAACCACAGCAAGCCATGGGGGAGGGT...AGAGAAAAACCAAACTGTTACACGTATTGATGTTGGGTAGCTTGGGATCCTTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| 3UTR CCA 72 bp | GGTCATGTGTGGTTGGAGAACAGTTTCTGTGTGGGATaGGGAAGGCCTAAAATTTTGTCACAGGAGAATGGA | + |
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Preference number: 3 (lower is better) Translates to: GHVWLENSFCVG*GRPKILSQENG Trigger: TCCATTCTCCTGTGACAAAATTTTAGGCCTTCCCCATCCCACACAGAAACTGTTCTCCAACCACACATGACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| 3UTR-3UTR CAA 90 bp | TACCCAACATCAATACGTGTAACAGTTTGGTTTTTCTCTGTCCACCCCTTTCTGGCTTGCTGTGGTTTGTaGATGACAATCAGCCACTGT | + |
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Preference number: 3 (lower is better) Translates to: YPTSIRVTVWFFSVHPFLACCGL*MTISHC Trigger: ACAGTGGCTGATTGTCATCAACAAACCACAGCAAGC...CAGAAAGGGGTGGACAGAGAAAAACCAAACTGTTACACGTATTGATGTTGGGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| 3UTR CCA 72 bp | ATCCCAAGCTACCCAACATCAATACGTGTAACAGTTTaGTTTTTCTCTGTCCACCCCTTTCTGGCAATTACC | + |
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Preference number: 3 (lower is better) Translates to: IPSYPTSIRVTV*FFSVHPFLAIT Trigger: GGTAATTGCCAGAAAGGGGTGGACAGAGAAAAACCAAACTGTTACACGTATTGATGTTGGGTAGCTTGGGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| 3UTR-3UTR CAA 90 bp | GAGTCAGTGCATTGTGATTTAATTCAGTGCTTCAAATCTCACCCTCACACAGACGGAAGGCCTAAAATTTaGTCACAGGAGAATGGACAG | + |
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Preference number: 3 (lower is better) Translates to: ESVHCDLIQCFKSHPHTDGRPKI*SQENGQ Trigger: CTGTCCATTCTCCTGTGACAAAATTTTAGGCCTTCC...GTCTGTGTGAGGGTGAGATTTGAAGCACTGAATTAAATCACAATGCACTGACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| 3UTR CCA 72 bp | AAAATTTTGTCACAGGAGAATGGACAGCAGGAGCCATaGATTCTAGTCTGGGTTTCTTGCATCAGAGATCTA | + |
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Preference number: 3 (lower is better) Translates to: KILSQENGQQEP*ILVWVSCIRDL Trigger: TAGATCTCTGATGCAAGAAACCCAGACTAGAATCCATGGCTCCTGCTGTCCATTCTCCTGTGACAAAATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| CDS-3UTR TCA 90 bp | CCTCAGCCTGCATGCTGCAGAATCAGTGCACCACGATGCACGCTGGCCAGATTCCGGGGGAGCTCAGCTTaGAGCTCAGAGACCTGGAGT | + |
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Preference number: 4 (lower is better) Translates to: PQPACCRISAPRCTLARFRGSSA*SSETWS Trigger: ACTCCAGGTCTCTGAGCTTCAAGCTGAGCTCCCCCG...GAATCTGGCCAGCGTGCATCGTGGTGCACTGATTCTGCAGCATGCAGGCTGAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| CDS-3UTR TCA 90 bp | TGCAGAATCAGTGCACCACGATGCACGCTGGCCAGATTCCCAGGGCTCCAGGGTCACCATTTTGGCCTCTaGCTTGCCCTTGAGTGCAGT | + |
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Preference number: 4 (lower is better) Translates to: CRISAPRCTLARFPGLQGHHFGL*LALECS Trigger: ACTGCACTCAAGGGCAAGTCAGAGGCCAAAATGGTG...ACCCTGGAGCCCTGGGAATCTGGCCAGCGTGCATCGTGGTGCACTGATTCTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| CDS-3UTR GCA 90 bp | TGCCATCCTGTCCTCTCTAGGTCAAGGTCTTGCAGCAGAGGAAGGTATGCCCCTTCAAATTCCACCTCCTaGTGGAGCTCGGGGGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: CHPVLSRSRSCSRGRYAPSNSTS*WSSGEL Trigger: GAGCTCCCCCGAGCTCCAGCAGGAGGTGGAATTTGA...AGGGGCATACCTTCCTCTGCTGCAAGACCTTGACCTAGAGAGGACAGGATGGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| CDS-3UTR GCA 90 bp | GCCACTGTTGGACAGAACCTCCCAACAGGTGGACAGATGGAAGTCGAGCTTGCGGTTCCTTGTTGGGTCTaGTGGATCCAGGATCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ATVGQNLPTGGQMEVELAVPCWV*WIQDQR Trigger: CCTCTGATCCTGGATCCAGCAGACCCAACAAGGAAC...CGCAAGCTCGACTTCCATCTGTCCACCTGTTGGGAGGTTCTGTCCAACAGTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| CDS-3UTR CCA 90 bp | ATGGGCAGTCAGGGATCAGAAGCCTGGAGTCTGATCACAGGCTGGATGCCCCTCGCGACAAATCCCAGGTaGGCACAAAGGACATATCAC | + |
|
Preference number: 4 (lower is better) Translates to: MGSQGSEAWSLITGWMPLATNPR*AQRTYH Trigger: GTGATATGTCCTTTGTGCCCACCTGGGATTTGTCGC...GAGGGGCATCCAGCCTGTGATCAGACTCCAGGCTTCTGATCCCTGACTGCCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| 3UTR CAA 72 bp | AGTCTGATCACAGGCTGGATGCCCCTCACTGGAGCCTaGAGTGCCATCCTGTCCTCTCTAGGTCAAGGTCTT | + |
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Preference number: 4 (lower is better) Translates to: SLITGWMPLTGA*SAILSSLGQGL Trigger: AAGACCTTGACCTAGAGAGGACAGGATGGCACTCAAGGCTCCAGTGAGGGGCATCCAGCCTGTGATCAGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| 3UTR CAA 72 bp | CAGAGTGCACCCTCCCCCATGGCTTGCTGTGGTTTGTaGATGACAATCAGCCACTGTTGGACAGAACCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: QSAPSPMACCGL*MTISHCWTEPP Trigger: GGGAGGTTCTGTCCAACAGTGGCTGATTGTCATCAACAAACCACAGCAAGCCATGGGGGAGGGTGCACTCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| CDS-3UTR TCA 90 bp | ATGACAATCAGCCACTGTTGGACAGAACCTCCCAACAGGTGGACAGATGGAAGTGACTGCATCCAGGTCTaGGCCTCCTTTGCCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: MTISHCWTEPPNRWTDGSDCIQV*ASFASR Trigger: CCTGCTGGCAAAGGAGGCTCAGACCTGGATGCAGTC...ACTTCCATCTGTCCACCTGTTGGGAGGTTCTGTCCAACAGTGGCTGATTGTCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| CDS-3UTR CCA 90 bp | GGTCACAAATTGCACATAGTTTCCCACACTGCTGTGGACCTCAGCCTGCATGCTACTCGTCCAGCTCCCTaGCTTGGATGCTGCAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: GHKLHIVSHTAVDLSLHATRPAP*LGCCRD Trigger: GTCTCTGCAGCATCCAAGCCAGGGAGCTGGACGAGT...AGCATGCAGGCTGAGGTCCACAGCAGTGTGGGAAACTATGTGCAATTTGTGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| CDS-3UTR TCA 90 bp | GATGACAATCAGCCACTGTTGGACAGAACCTCCCAACAGGTGGACAGATGGAAGCCCATACATAGACAGTaGGCAGCTCCAGGGCGTACT | + |
|
Preference number: 4 (lower is better) Translates to: DDNQPLLDRTSQQVDRWKPIHRQ*AAPGRT Trigger: AGTACGCCCTGGAGCTGCTCACTGTCTATGTATGGG...CTTCCATCTGTCCACCTGTTGGGAGGTTCTGTCCAACAGTGGCTGATTGTCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| 3UTR CAA 72 bp | AGGTTCCTTCTCTCAGAGTGCACCCTCCCCCATGGCTaGCTGTGGTTTGTTGATGACAATCAGCCACTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: RFLLSECTLPHG*LWFVDDNQPLL Trigger: CAACAGTGGCTGATTGTCATCAACAAACCACAGCAAGCCATGGGGGAGGGTGCACTCTGAGAGAAGGAACCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| CDS-3UTR TCA 90 bp | GTGTACTTAAAGGTTCCTTCTCTCAGAGTGCACCCTCCCCCATGGCTTGCTGTGCCTCTGACTTGCCCTTaGGTGCAGTGTGTTCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: VYLKVPSLRVHPPPWLAVPLTCP*VQCVHH Trigger: ATGATGAACACACTGCACTCAAGGGCAAGTCAGAGG...CACAGCAAGCCATGGGGGAGGGTGCACTCTGAGAGAAGGAACCTTTAAGTACAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| CDS-3UTR CCA 90 bp | ATGGAAGTCGAGCTTGCGTTCTTCTCTGTCCATCACAGTCTGACTCCCAGAGAATCAGAGACCTGGAGTTaGGCTCCTCTGAGCTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: MEVELAFFSVHHSLTPRESETWS*APLSSA Trigger: TGCAGAGCTCAGAGGAGCCCAACTCCAGGTCTCTGA...TTCTCTGGGAGTCAGACTGTGATGGACAGAGAAGAACGCAAGCTCGACTTCCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| CDS-3UTR CCA 90 bp | GACCTCAGCCTGCATGCTGCAGAATCAGTGCACCACGATGCACGCTGGCCAGATAGGTCCGGAAGTTCTTaGCTGTGGTTACTTTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: DLSLHAAESVHHDARWPDRSGSS*LWLLFL Trigger: AAGAAAAAGTAACCACAGCCAAGAACTTCCGGACCT...ATCTGGCCAGCGTGCATCGTGGTGCACTGATTCTGCAGCATGCAGGCTGAGGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| CDS-3UTR GCA 90 bp | GTGTACTTAAAGGTTCCTTCTCTCAGAGTGCACCCTCCCCCATGGCTTGCTGTGGGCTCCTCTGAGCTCTaGACCTCAAACTTCACTTTA | + |
|
Preference number: 4 (lower is better) Translates to: VYLKVPSLRVHPPPWLAVGSSEL*TSNFTL Trigger: TAAAGTGAAGTTTGAGGTGCAGAGCTCAGAGGAGCC...CACAGCAAGCCATGGGGGAGGGTGCACTCTGAGAGAAGGAACCTTTAAGTACAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| 3UTR CAA 72 bp | CTCTGTCCATCACAGTCTGACTCCCAGAGAACACTGTaGGAAGCTAAGGCAGATGAAGCAGCCTGTGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LCPSQSDSQRTL*EAKADEAACEE Trigger: TTCCTCACAGGCTGCTTCATCTGCCTTAGCTTCCAACAGTGTTCTCTGGGAGTCAGACTGTGATGGACAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| 3UTR CAA 72 bp | GGCTTGCTGTGGTTTGTTGATGACAATCAGCCACTGTaGGACAGAACCTCCCAACAGGTGGACAGATGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GLLWFVDDNQPL*DRTSQQVDRWK Trigger: CTTCCATCTGTCCACCTGTTGGGAGGTTCTGTCCAACAGTGGCTGATTGTCATCAACAAACCACAGCAAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| CDS-3UTR CCA 90 bp | CAGCCACTGTTGGACAGAACCTCCCAACAGGTGGACAGATGGAAGTCGAGCTTGAAACTTCACTTTAAATaGTTTCTCTTGCTGCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QPLLDRTSQQVDRWKSSLKLHFK*FLLLQL Trigger: CAGCTGCAGCAAGAGAAACCATTTAAAGTGAAGTTT...CAAGCTCGACTTCCATCTGTCCACCTGTTGGGAGGTTCTGTCCAACAGTGGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| CDS-3UTR CCA 90 bp | GCCACTGTTGGACAGAACCTCCCAACAGGTGGACAGATGGAAGTCGAGCTTGCGGGAAGTTCTTGGCTGTaGTTACTTTTTCTTGATTTT | + |
|
Preference number: 4 (lower is better) Translates to: ATVGQNLPTGGQMEVELAGSSWL*LLFLDF Trigger: AAAATCAAGAAAAAGTAACCACAGCCAAGAACTTCC...CGCAAGCTCGACTTCCATCTGTCCACCTGTTGGGAGGTTCTGTCCAACAGTGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| CDS-3UTR TCA 90 bp | AGAAGGATCCCAAGCTACCCAACATCAATACGTGTAACAGTTTGGTTTTTCTCTGCGCACGATACCTCATaGAGTTCTGATGGAGGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: RRIPSYPTSIRVTVWFFSAHDTS*SSDGGR Trigger: CCGACCTCCATCAGAACTTCATGAGGTATCGTGCGC...AGAGAAAAACCAAACTGTTACACGTATTGATGTTGGGTAGCTTGGGATCCTTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| 3UTR CAA 72 bp | AACAGTTTCTGTGTGGGATGGGGAAGGCCTAAAATTTaGTCACAGGAGAATGGACAGCAGGAGCCATGGATT | + |
|
Preference number: 4 (lower is better) Translates to: NSFCVGWGRPKI*SQENGQQEPWI Trigger: AATCCATGGCTCCTGCTGTCCATTCTCCTGTGACAAAATTTTAGGCCTTCCCCATCCCACACAGAAACTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| 3UTR CAA 72 bp | AGACAGCTAAGCTTTCAAGTCATCACTGGTCACAAATaGCACATAGTTTCCCACACTGCTGTGGACCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RQLSFQVITGHK*HIVSHTAVDLS Trigger: GCTGAGGTCCACAGCAGTGTGGGAAACTATGTGCAATTTGTGACCAGTGATGACTTGAAAGCTTAGCTGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| 3UTR CAA 72 bp | GATCCCAAGCTACCCAACATCAATACGTGTAACAGTTaGGTTTTTCTCTGTCCACCCCTTTCTGGCAATTAC | + |
|
Preference number: 4 (lower is better) Translates to: DPKLPNINTCNS*VFLCPPLSGNY Trigger: GTAATTGCCAGAAAGGGGTGGACAGAGAAAAACCAAACTGTTACACGTATTGATGTTGGGTAGCTTGGGATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| CDS-3UTR CAA 90 bp | GGCAGTCAGGGATCAGAAGCCTGGAGTCTGATCACAGGCTGGATGCCCCTCACTAGGATGGGCGGCACCTaGGAAGCATCTCTCCTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: GSQGSEAWSLITGWMPLTRMGGT*EASLLQ Trigger: CTGAAGGAGAGATGCTTCCAAGGTGCCGCCCATCCT...AGTGAGGGGCATCCAGCCTGTGATCAGACTCCAGGCTTCTGATCCCTGACTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| CDS-3UTR CAA 90 bp | TGCCATCCTGTCCTCTCTAGGTCAAGGTCTTGCAGCAGAGGAAGGTATGCCCCTCAGCCACGTTCCTTGTaGGGTCTGCTGGATCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: CHPVLSRSRSCSRGRYAPQPRSL*GLLDPG Trigger: TCCTGGATCCAGCAGACCCAACAAGGAACGTGGCTG...AGGGGCATACCTTCCTCTGCTGCAAGACCTTGACCTAGAGAGGACAGGATGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| CDS-3UTR CAA 90 bp | GTGTACTTAAAGGTTCCTTCTCTCAGAGTGCACCCTCCCCCATGGCTTGCTGTGAGGTCTGAGCCTCCTTaGCCAGCAGGTCCCATGCCT | + |
|
Preference number: 5 (lower is better) Translates to: VYLKVPSLRVHPPPWLAVRSEPP*PAGPMP Trigger: AGGCATGGGACCTGCTGGCAAAGGAGGCTCAGACCT...CACAGCAAGCCATGGGGGAGGGTGCACTCTGAGAGAAGGAACCTTTAAGTACAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| CDS-3UTR CAA 90 bp | GATGACAATCAGCCACTGTTGGACAGAACCTCCCAACAGGTGGACAGATGGAAGGTCCAGCTCCCTGGCTaGGATGCTGCAGAGACCATT | + |
|
Preference number: 5 (lower is better) Translates to: DDNQPLLDRTSQQVDRWKVQLPG*DAAETI Trigger: AATGGTCTCTGCAGCATCCAAGCCAGGGAGCTGGAC...CTTCCATCTGTCCACCTGTTGGGAGGTTCTGTCCAACAGTGGCTGATTGTCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| CDS-3UTR CAA 90 bp | GCTTGCTGTGGTTTGTTGATGACAATCAGCCACTGTTGGACAGAACCTCCCAACTCGGGGGAGCTCAGCTaGAAGCTCAGAGACCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: ACCGLLMTISHCWTEPPNSGELS*KLRDLE Trigger: CTCCAGGTCTCTGAGCTTCAAGCTGAGCTCCCCCGA...GTTGGGAGGTTCTGTCCAACAGTGGCTGATTGTCATCAACAAACCACAGCAAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| CDS TCA 90 bp | GGGGGAGCTCAGCTTGAAGCTCAGAGACCTGGAGTTGGGCTCCTCTaGGCTCTGCACCTCAAACTTCACTTTAAATGGTTTCTCTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GGAQLEAQRPGVGLL*ALHLKLHFKWFLLL Trigger: CAGCAAGAGAAACCATTTAAAGTGAAGTTTGAGGTGCAGAGCTCAGAGGAGCCCAACTCCAGGTCTCTGAGCTTCAAGCTGAGCTCCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| CDS-3UTR CAA 90 bp | ATGAAGCAGCCTGTGAGGAAGGCTATCCATGGGCAGTCAGGGATCAGAAGCCTGCTTCTCCTTACACAGTaGATACCAGTGCTTGACCAG | + |
|
Preference number: 5 (lower is better) Translates to: MKQPVRKAIHGQSGIRSLLLLTQ*IPVLDQ Trigger: CTGGTCAAGCACTGGTATCAACTGTGTAAGGAGAAG...CAGGCTTCTGATCCCTGACTGCCCATGGATAGCCTTCCTCACAGGCTGCTTCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| CDS TCA 90 bp | AAGGACATATCACAGTTTCTAAAGCAAGAGGACTGCATCCAGGTCTaGGCCTCCTTTGCCAGCAGGTCCCATGCCTGTAAGTCTGAACCA | + |
|
Preference number: 5 (lower is better) Translates to: KDISQFLKQEDCIQV*ASFASRSHACKSEP Trigger: TGGTTCAGACTTACAGGCATGGGACCTGCTGGCAAAGGAGGCTCAGACCTGGATGCAGTCCTCTTGCTTTAGAAACTGTGATATGTCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| CDS-3UTR CAA 90 bp | TGGTCACAAATTGCACATAGTTTCCCACACTGCTGTGGACCTCAGCCTGCATGCAAGAACAACACCATTTaGGCCTCTGACTTGCCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: WSQIAHSFPHCCGPQPACKNNTI*ASDLPL Trigger: CAAGGGCAAGTCAGAGGCCAAAATGGTGTTGTTCTT...GCATGCAGGCTGAGGTCCACAGCAGTGTGGGAAACTATGTGCAATTTGTGACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| CDS-3UTR CAA 90 bp | GGTCACAAATTGCACATAGTTTCCCACACTGCTGTGGACCTCAGCCTGCATGCTTTTAAATGGTTTCTCTaGCTGCAGCTGACACAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: GHKLHIVSHTAVDLSLHAFKWFL*LQLTQV Trigger: CACCTGTGTCAGCTGCAGCAAGAGAAACCATTTAAA...AGCATGCAGGCTGAGGTCCACAGCAGTGTGGGAAACTATGTGCAATTTGTGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| CDS-3UTR CAA 90 bp | GATGACAATCAGCCACTGTTGGACAGAACCTCCCAACAGGTGGACAGATGGAAGAAGGTCCGGAAGTTCTaGGCTGTGGTTACTTTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: DDNQPLLDRTSQQVDRWKKVRKF*AVVTFS Trigger: AGAAAAAGTAACCACAGCCAAGAACTTCCGGACCTT...CTTCCATCTGTCCACCTGTTGGGAGGTTCTGTCCAACAGTGGCTGATTGTCATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| CDS GCA 90 bp | TTGGAAGCATCTCTCCTTCAGGAAAGCACTTATGGAGTCGATGTCTaGTCTGAGCTCAGTAAGGAAGGTGGTGTCAGGAAAGAGGTAATC | + |
|
Preference number: 5 (lower is better) Translates to: LEASLLQESTYGVDV*SELSKEGGVRKEVI Trigger: GATTACCTCTTTCCTGACACCACCTTCCTTACTGAGCTCAGAGCAGACATCGACTCCATAAGTGCTTTCCTGAAGGAGAGATGCTTCCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| CDS-3UTR CAA 90 bp | ATTCTAGTCTGGGTTTCTTGCATCAGAGATCTAGAAGGATCCCAAGCTACCCAAGCCTCTGACTTGCCCTaGAGTGCAGTGTGTTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: ILVWVSCIRDLEGSQATQASDLP*SAVCSS Trigger: TGATGAACACACTGCACTCAAGGGCAAGTCAGAGGC...TTGGGTAGCTTGGGATCCTTCTAGATCTCTGATGCAAGAAACCCAGACTAGAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| CDS-3UTR CAA 90 bp | TGCTCAAGGTTTCTAGTTGCATATGGACACACCACATCCTTAAACACACAGACACTGGAAGGCACATTCTaGTCTCTCTGGCGACAAATC | + |
|
Preference number: 5 (lower is better) Translates to: CSRFLVAYGHTTSLNTQTLEGTF*SLWRQI Trigger: GATTTGTCGCCAGAGAGACAAGAATGTGCCTTCCAG...TGTCTGTGTGTTTAAGGATGTGGTGTGTCCATATGCAACTAGAAACCTTGAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| CDS CCA 90 bp | TGTAATAGGCGACCAGTTCTAAGAAGGTCCGGAAGTTCTTGGCTGTaGTTACTTTTTCTTGATTTTTATTCGAATGTTCCCATACATAGA | + |
|
Preference number: 5 (lower is better) Translates to: CNRRPVLRRSGSSWL*LLFLDFYSNVPIHR Trigger: TCTATGTATGGGAACATTCGAATAAAAATCAAGAAAAAGTAACCACAGCCAAGAACTTCCGGACCTTCTTAGAACTGGTCGCCTATTACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| CDS CCA 90 bp | GATTCTTGTAATAGGCGACCAGTTCTAAGAAGGTCCGGAAGTTCTTaGCTGTGGTTACTTTTTCTTGATTTTTATTCGAATGTTCCCATA | + |
|
Preference number: 5 (lower is better) Translates to: DSCNRRPVLRRSGSS*LWLLFLDFYSNVPI Trigger: TATGGGAACATTCGAATAAAAATCAAGAAAAAGTAACCACAGCCAAGAACTTCCGGACCTTCTTAGAACTGGTCGCCTATTACAAGAATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| CDS CCA 72 bp | GAGCCGCCCATCACAACCCTGGAGACCCTCACAGGATaGGCGGCACCTTGGAAGCATCTCTCCTTCAGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: EPPITTLETLTG*AAPWKHLSFRK Trigger: TTTCCTGAAGGAGAGATGCTTCCAAGGTGCCGCCCATCCTGTGAGGGTCTCCAGGGTTGTGATGGGCGGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| CDS CAA 90 bp | TGCACATCAAATTCCACCTCCTGCTGGAGCTCGGGGGAGCTCAGCTaGAAGCTCAGAGACCTGGAGTTGGGCTCCTCTGAGCTCTGCACC | + |
|
Preference number: 6 (lower is better) Translates to: CTSNSTSCWSSGELS*KLRDLELGSSELCT Trigger: GGTGCAGAGCTCAGAGGAGCCCAACTCCAGGTCTCTGAGCTTCAAGCTGAGCTCCCCCGAGCTCCAGCAGGAGGTGGAATTTGATGTGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| CDS CAA 72 bp | TCGGGGGAGCTCAGCTTGAAGCTCAGAGACCTGGAGTaGGGCTCCTCTGAGCTCTGCACCTCAAACTTCACT | + |
|
Preference number: 6 (lower is better) Translates to: SGELSLKLRDLE*GSSELCTSNFT Trigger: AGTGAAGTTTGAGGTGCAGAGCTCAGAGGAGCCCAACTCCAGGTCTCTGAGCTTCAAGCTGAGCTCCCCCGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| CDS CAA 90 bp | TGCTGGAGCTCGGGGGAGCTCAGCTTGAAGCTCAGAGACCTGGAGTaGGGCTCCTCTGAGCTCTGCACCTCAAACTTCACTTTAAATGGT | + |
|
Preference number: 6 (lower is better) Translates to: CWSSGELSLKLRDLE*GSSELCTSNFTLNG Trigger: ACCATTTAAAGTGAAGTTTGAGGTGCAGAGCTCAGAGGAGCCCAACTCCAGGTCTCTGAGCTTCAAGCTGAGCTCCCCCGAGCTCCAGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| CDS CAA 72 bp | GCCCTCCTTCTCCAGGGTGGTGCACTCATGGATGAGTaGGGCGTAGACTTTGTTGTAGAATTGGGGTTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: ALLLQGGALMDE*GVDFVVELGFS Trigger: GCTGAACCCCAATTCTACAACAAAGTCTACGCCCAACTCATCCATGAGTGCACCACCCTGGAGAAGGAGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
||
| CDS TCA 72 bp | TCACAGTTTCTAAAGCAAGAGGACTGCATCCAGGTCTaGGCCTCCTTTGCCAGCAGGTCCCATGCCTGTAAG | + |
|
Preference number: 6 (lower is better) Translates to: SQFLKQEDCIQV*ASFASRSHACK Trigger: CTTACAGGCATGGGACCTGCTGGCAAAGGAGGCTCAGACCTGGATGCAGTCCTCTTGCTTTAGAAACTGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
||
| CDS TCA 72 bp | CAGCTTGAAGCTCAGAGACCTGGAGTTGGGCTCCTCTaGGCTCTGCACCTCAAACTTCACTTTAAATGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: QLEAQRPGVGLL*ALHLKLHFKWF Trigger: AAACCATTTAAAGTGAAGTTTGAGGTGCAGAGCTCAGAGGAGCCCAACTCCAGGTCTCTGAGCTTCAAGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
||
| CDS CAA 72 bp | CCCCGTCGCTTTAACTGCTCCTCAAAGCTGGTGAGATaGTTAAAGAACAACACCATTTTGGCCTCTGACTTG | + |
|
Preference number: 6 (lower is better) Translates to: PRRFNCSSKLVR*LKNNTILASDL Trigger: CAAGTCAGAGGCCAAAATGGTGTTGTTCTTTAACAATCTCACCAGCTTTGAGGAGCAGTTAAAGCGACGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
||
| CDS CAA 72 bp | TCAAAGCTGGTGAGATTGTTAAAGAACAACACCATTTaGGCCTCTGACTTGCCCTTGAGTGCAGTGTGTTCA | + |
|
Preference number: 6 (lower is better) Translates to: SKLVRLLKNNTI*ASDLPLSAVCS Trigger: TGAACACACTGCACTCAAGGGCAAGTCAGAGGCCAAAATGGTGTTGTTCTTTAACAATCTCACCAGCTTTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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| CDS CCA 72 bp | CGACCAGTTCTAAGAAGGTCCGGAAGTTCTTGGCTGTaGTTACTTTTTCTTGATTTTTATTCGAATGTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: RPVLRRSGSSWL*LLFLDFYSNVP Trigger: GGGAACATTCGAATAAAAATCAAGAAAAAGTAACCACAGCCAAGAACTTCCGGACCTTCTTAGAACTGGTCG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000117193.8 |
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