Pregenerated sensors for OAS1B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029605Ensembl transcript IDs: ENSMUST00000086377.9, ENSMUST00000183291.2
Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGCCTGGAGTCTGATCACAGGTTGGACCCTCCCTCTCTTGGGCTTTaGGCACCTTCCTGTCTTCTCTGGGTCAAGGCCCTGCAGCAGAGC | + |
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Preference number: 1 (lower is better) Translates to: SLESDHRLDPPSLGL*APSCLLWVKALQQS Trigger: GCTCTGCTGCAGGGCCTTGACCCAGAGAAGACAGGAAGGTGCCCAAAGCCCAAGAGAGGGAGGGTCCAACCTGTGATCAGACTCCAGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086377.9 ENSMUST00000183291.2 |
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| 3UTR TCA 90 bp | CTTCGTTGGCACTGCAACCTCCGTCGGCACCTCCCAGGAGCACACTaGGGAACCGTCCCTGTACTTAAAGCATGGGTATTGCAGCCAGGC | + |
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Preference number: 1 (lower is better) Translates to: LRWHCNLRRHLPGAH*GTVPVLKAWVLQPG Trigger: GCCTGGCTGCAATACCCATGCTTTAAGTACAGGGACGGTTCCTCAGTGTGCTCCTGGGAGGTGCCGACGGAGGTTGCAGTGCCAACGAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086377.9 |
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| 3UTR GCA 90 bp | CTCTTGGGCTTTGGGCACCTTCCTGTCTTCTCTGGGTCAAGGCCCTaGAGCAGAGCAGGACATGCGTCTGACTCTGGAGCATCCTGGACA | + |
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Preference number: 1 (lower is better) Translates to: LLGFGHLPVFSGSRP*SRAGHASDSGASWT Trigger: TGTCCAGGATGCTCCAGAGTCAGACGCATGTCCTGCTCTGCTGCAGGGCCTTGACCCAGAGAAGACAGGAAGGTGCCCAAAGCCCAAGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086377.9 ENSMUST00000183291.2 |
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| 3UTR CCA 90 bp | AGGCCCTGCAGCAGAGCAGGACATGCGTCTGACTCTGGAGCATCCTaGACAGGTCCCACTGGGCTCACAGGAAAACACATGCCCAGTTCT | + |
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Preference number: 1 (lower is better) Translates to: RPCSRAGHASDSGAS*TGPTGLTGKHMPSS Trigger: AGAACTGGGCATGTGTTTTCCTGTGAGCCCAGTGGGACCTGTCCAGGATGCTCCAGAGTCAGACGCATGTCCTGCTCTGCTGCAGGGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086377.9 ENSMUST00000183291.2 |
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| 3UTR GCA 90 bp | CAGGAGCACACTGAGGAACCGTCCCTGTACTTAAAGCATGGGTATTaGAGCCAGGCGGCAGCCTCTCCTGCTAGACGCCTCCAGTCCTTT | + |
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Preference number: 1 (lower is better) Translates to: QEHTEEPSLYLKHGY*SQAAASPARRLQSF Trigger: AAAGGACTGGAGGCGTCTAGCAGGAGAGGCTGCCGCCTGGCTGCAATACCCATGCTTTAAGTACAGGGACGGTTCCTCAGTGTGCTCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086377.9 |
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| 3UTR CCA 90 bp | CTTACAGGTTCAGACGTTCAGTCCATTATAACCAAGGCAAGAGCATaGCAACGTCCAGGCAGGCATGGTGCAGGAGGAGCTGAGAGTTCT | + |
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Preference number: 1 (lower is better) Translates to: LTGSDVQSIITKARA*QRPGRHGAGGAESS Trigger: AGAACTCTCAGCTCCTCCTGCACCATGCCTGCCTGGACGTTGCCATGCTCTTGCCTTGGTTATAATGGACTGAACGTCTGAACCTGTAAG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086377.9 ENSMUST00000183291.2 |
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| 3UTR TCA 90 bp | GCCATTCCCTGGGCCAACCATATACAAACCATAATATTCTCCTTCTaGATCTCTTGTCTCCCAGAGAACACTGTTGGGGGACAAGGCAGA | + |
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Preference number: 1 (lower is better) Translates to: AIPWANHIQTIIFSF*ISCLPENTVGGQGR Trigger: TCTGCCTTGTCCCCCAACAGTGTTCTCTGGGAGACAAGAGATTCAGAAGGAGAATATTATGGTTTGTATATGGTTGGCCCAGGGAATGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086377.9 ENSMUST00000183291.2 |
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| 3UTR CCA 90 bp | CATAATATTCTCCTTCTGAATCTCTTGTCTCCCAGAGAACACTGTTaGGGGACAAGGCAGATAAAGCAGGCTGTGAGAAAGGCTGTCTGT | + |
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Preference number: 1 (lower is better) Translates to: HNILLLNLLSPREHC*GTRQIKQAVRKAVC Trigger: ACAGACAGCCTTTCTCACAGCCTGCTTTATCTGCCTTGTCCCCCAACAGTGTTCTCTGGGAGACAAGAGATTCAGAAGGAGAATATTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086377.9 ENSMUST00000183291.2 |
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| 3UTR TCA 90 bp | ATATCCAAGACACTCTGGGCTATCCAGATGAAGTCTTCCCAAAGATaGAATGAAACAAAGACCAAAACAATAACCAGAAAATACGACAAA | + |
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Preference number: 1 (lower is better) Translates to: ISKTLWAIQMKSSQR*NETKTKTITRKYDK Trigger: TTTGTCGTATTTTCTGGTTATTGTTTTGGTCTTTGTTTCATTTCATCTTTGGGAAGACTTCATCTGGATAGCCCAGAGTGTCTTGGATAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086377.9 |
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| 3UTR CAA 90 bp | CAGGGGTTGAGGGCAGGGGACAGAAGCCTGGAGTCTGATCACAGGTaGGACCCTCCCTCTCTTGGGCTTTGGGCACCTTCCTGTCTTCTC | + |
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Preference number: 2 (lower is better) Translates to: QGLRAGDRSLESDHR*DPPSLGLWAPSCLL Trigger: GAGAAGACAGGAAGGTGCCCAAAGCCCAAGAGAGGGAGGGTCCAACCTGTGATCAGACTCCAGGCTTCTGTCCCCTGCCCTCAACCCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086377.9 ENSMUST00000183291.2 |
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| 3UTR-3UTR CCA 90 bp | CAGGTTGGACCCTCCCTCTCTTGGGCTTTGGGCACCTTCCTGTCTTCTCTGGGTGACTCTGGAGCATCCTaGACAGGTCCCACTGGGCTC | + |
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Preference number: 2 (lower is better) Translates to: QVGPSLSWALGTFLSSLGDSGAS*TGPTGL Trigger: GAGCCCAGTGGGACCTGTCCAGGATGCTCCAGAGTC...ACCCAGAGAAGACAGGAAGGTGCCCAAAGCCCAAGAGAGGGAGGGTCCAACCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086377.9 ENSMUST00000183291.2 |
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| 3UTR-3UTR GCA 90 bp | AGAGAACACTGTTGGGGGACAAGGCAGATAAAGCAGGCTGTGAGAAAGGCTGTCTCTGGGTCAAGGCCCTaGAGCAGAGCAGGACATGCG | + |
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Preference number: 2 (lower is better) Translates to: REHCWGTRQIKQAVRKAVSGSRP*SRAGHA Trigger: CGCATGTCCTGCTCTGCTGCAGGGCCTTGACCCAGA...GACAGCCTTTCTCACAGCCTGCTTTATCTGCCTTGTCCCCCAACAGTGTTCTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086377.9 ENSMUST00000183291.2 |
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| 3UTR-3UTR GCA 90 bp | TGCAGTCATGCCAGCGCTAAGGCAGGAGGATGGCAATATCCAAGACACTCTGGGTTAAAGCATGGGTATTaGAGCCAGGCGGCAGCCTCT | + |
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Preference number: 2 (lower is better) Translates to: CSHASAKAGGWQYPRHSGLKHGY*SQAAAS Trigger: AGAGGCTGCCGCCTGGCTGCAATACCCATGCTTTAA...CCCAGAGTGTCTTGGATATTGCCATCCTCCTGCCTTAGCGCTGGCATGACTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086377.9 |
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| 3UTR-3UTR TCA 90 bp | GAGGAGCTGAGAGTTCTACATCTTCATCTGAAGGCTGCTAGCAGAATACTGACTCAGTTCTTGTCCACTTaGGGATGGAAGGGAGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: EELRVLHLHLKAASRILTQFLST*GWKGGR Trigger: CCTGCCTCCCTTCCATCCTCAAGTGGACAAGAACTG...AGTCAGTATTCTGCTAGCAGCCTTCAGATGAAGATGTAGAACTCTCAGCTCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086377.9 ENSMUST00000183291.2 |
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| 3UTR-3UTR TCA 90 bp | CCAGGCAGGCATGGTGCAGGAGGAGCTGAGAGTTCTACATCTTCATCTGAAGGCATAATATTCTCCTTCTaGATCTCTTGTCTCCCAGAG | + |
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Preference number: 2 (lower is better) Translates to: PGRHGAGGAESSTSSSEGIIFSF*ISCLPE Trigger: CTCTGGGAGACAAGAGATTCAGAAGGAGAATATTAT...GCCTTCAGATGAAGATGTAGAACTCTCAGCTCCTCCTGCACCATGCCTGCCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086377.9 ENSMUST00000183291.2 |
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| 3UTR-3UTR GCA 90 bp | TCCCAGAGAACACTGTTGGGGGACAAGGCAGATAAAGCAGGCTGTGAGAAAGGCTTTTTGAGCTGTTGGTaGAGGTATTCAGAGACCTCT | + |
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Preference number: 2 (lower is better) Translates to: SQRTLLGDKADKAGCEKGFLSCW*RYSETS Trigger: AGAGGTCTCTGAATACCTGCACCAACAGCTCAAAAA...GCCTTTCTCACAGCCTGCTTTATCTGCCTTGTCCCCCAACAGTGTTCTCTGGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000086377.9 |
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| 3UTR TCA 72 bp | TGGGTCAAGGCCCTGCAGCAGAGCAGGACATGCGTCTaGCTCTGGAGCATCCTGGACAGGTCCCACTGGGCT | + |
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Preference number: 3 (lower is better) Translates to: WVKALQQSRTCV*LWSILDRSHWA Trigger: AGCCCAGTGGGACCTGTCCAGGATGCTCCAGAGTCAGACGCATGTCCTGCTCTGCTGCAGGGCCTTGACCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086377.9 ENSMUST00000183291.2 |
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| 3UTR TCA 72 bp | GCAGGGGTTGAGGGCAGGGGACAGAAGCCTGGAGTCTaGTCACAGGTTGGACCCTCCCTCTCTTGGGCTTTG | + |
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Preference number: 3 (lower is better) Translates to: AGVEGRGQKPGV*SQVGPSLSWAL Trigger: CAAAGCCCAAGAGAGGGAGGGTCCAACCTGTGATCAGACTCCAGGCTTCTGTCCCCTGCCCTCAACCCCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086377.9 ENSMUST00000183291.2 |
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| 3UTR CCA 72 bp | CCCTCTCTTGGGCTTTGGGCACCTTCCTGTCTTCTCTaGGTCAAGGCCCTGCAGCAGAGCAGGACATGCGTC | + |
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Preference number: 3 (lower is better) Translates to: PSLGLWAPSCLL*VKALQQSRTCV Trigger: GACGCATGTCCTGCTCTGCTGCAGGGCCTTGACCCAGAGAAGACAGGAAGGTGCCCAAAGCCCAAGAGAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086377.9 ENSMUST00000183291.2 |
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| 3UTR CCA 72 bp | GGGCAGGGGACAGAAGCCTGGAGTCTGATCACAGGTTaGACCCTCCCTCTCTTGGGCTTTGGGCACCTTCCT | + |
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Preference number: 3 (lower is better) Translates to: GQGTEAWSLITG*TLPLLGFGHLP Trigger: AGGAAGGTGCCCAAAGCCCAAGAGAGGGAGGGTCCAACCTGTGATCAGACTCCAGGCTTCTGTCCCCTGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086377.9 ENSMUST00000183291.2 |
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| 3UTR-3UTR CAA 90 bp | CCAGGCAGGCATGGTGCAGGAGGAGCTGAGAGTTCTACATCTTCATCTGAAGGCCTGTCTGTGCAGGGGTaGAGGGCAGGGGACAGAAGC | + |
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Preference number: 3 (lower is better) Translates to: PGRHGAGGAESSTSSSEGLSVQG*RAGDRS Trigger: GCTTCTGTCCCCTGCCCTCAACCCCTGCACAGACAG...GCCTTCAGATGAAGATGTAGAACTCTCAGCTCCTCCTGCACCATGCCTGCCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086377.9 ENSMUST00000183291.2 |
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| 3UTR-3UTR CAA 90 bp | ACAGGTTGGACCCTCCCTCTCTTGGGCTTTGGGCACCTTCCTGTCTTCTCTGGGAACCGGCTATGTTCCTaGTTGGGTCAGTGGGGTCCA | + |
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Preference number: 3 (lower is better) Translates to: TGWTLPLLGFGHLPVFSGNRLCS*LGQWGP Trigger: TGGACCCCACTGACCCAACAAGGAACATAGCCGGTT...CCCAGAGAAGACAGGAAGGTGCCCAAAGCCCAAGAGAGGGAGGGTCCAACCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086377.9 |
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| 3UTR GCA 72 bp | TTTGGGCACCTTCCTGTCTTCTCTGGGTCAAGGCCCTaGAGCAGAGCAGGACATGCGTCTGACTCTGGAGCA | + |
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Preference number: 3 (lower is better) Translates to: FGHLPVFSGSRP*SRAGHASDSGA Trigger: TGCTCCAGAGTCAGACGCATGTCCTGCTCTGCTGCAGGGCCTTGACCCAGAGAAGACAGGAAGGTGCCCAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086377.9 ENSMUST00000183291.2 |
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| 3UTR TCA 72 bp | CACTGCAACCTCCGTCGGCACCTCCCAGGAGCACACTaGGGAACCGTCCCTGTACTTAAAGCATGGGTATTG | + |
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Preference number: 3 (lower is better) Translates to: HCNLRRHLPGAH*GTVPVLKAWVL Trigger: CAATACCCATGCTTTAAGTACAGGGACGGTTCCTCAGTGTGCTCCTGGGAGGTGCCGACGGAGGTTGCAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086377.9 |
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| 3UTR GCA 72 bp | CCTGGACAGGTCCCACTGGGCTCACAGGAAAACACATaGCCAGTTCTTGTCCACTTGAGGATGGAAGGGAGG | + |
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Preference number: 3 (lower is better) Translates to: PGQVPLGSQENT*PVLVHLRMEGR Trigger: CCTCCCTTCCATCCTCAAGTGGACAAGAACTGGGCATGTGTTTTCCTGTGAGCCCAGTGGGACCTGTCCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086377.9 ENSMUST00000183291.2 |
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| 3UTR CCA 72 bp | AGCAGAGCAGGACATGCGTCTGACTCTGGAGCATCCTaGACAGGTCCCACTGGGCTCACAGGAAAACACATG | + |
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Preference number: 3 (lower is better) Translates to: SRAGHASDSGAS*TGPTGLTGKHM Trigger: CATGTGTTTTCCTGTGAGCCCAGTGGGACCTGTCCAGGATGCTCCAGAGTCAGACGCATGTCCTGCTCTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086377.9 ENSMUST00000183291.2 |
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| 3UTR-3UTR CAA 90 bp | AGAACACTGTTGGGGGACAAGGCAGATAAAGCAGGCTGTGAGAAAGGCTGTCTGGAGTCTGATCACAGGTaGGACCCTCCCTCTCTTGGG | + |
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Preference number: 3 (lower is better) Translates to: RTLLGDKADKAGCEKGCLESDHR*DPPSLG Trigger: CCCAAGAGAGGGAGGGTCCAACCTGTGATCAGACTC...CAGACAGCCTTTCTCACAGCCTGCTTTATCTGCCTTGTCCCCCAACAGTGTTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086377.9 ENSMUST00000183291.2 |
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| 3UTR CCA 72 bp | TCAGACGTTCAGTCCATTATAACCAAGGCAAGAGCATaGCAACGTCCAGGCAGGCATGGTGCAGGAGGAGCT | + |
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Preference number: 3 (lower is better) Translates to: SDVQSIITKARA*QRPGRHGAGGA Trigger: AGCTCCTCCTGCACCATGCCTGCCTGGACGTTGCCATGCTCTTGCCTTGGTTATAATGGACTGAACGTCTGA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086377.9 ENSMUST00000183291.2 |
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| 3UTR-3UTR CAA 90 bp | CATCTTCATCTGAAGGCTGCTAGCAGAATACTGACTTCCAGGCAGCTAAGACAAACAGGCCTGTCTTTTTaGAGCTGTTGGTGCAGGTAT | + |
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Preference number: 3 (lower is better) Translates to: HLHLKAASRILTSRQLRQTGLSF*SCWCRY Trigger: ATACCTGCACCAACAGCTCAAAAAAGACAGGCCTGT...TTGTCTTAGCTGCCTGGAAGTCAGTATTCTGCTAGCAGCCTTCAGATGAAGATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086377.9 |
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| 3UTR CCA 72 bp | TCCAACATGGCCACACCTCCTAACAGTGCCATTCCCTaGGCCAACCATATACAAACCATAATATTCTCCTTC | + |
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Preference number: 3 (lower is better) Translates to: SNMATPPNSAIP*ANHIQTIIFSF Trigger: GAAGGAGAATATTATGGTTTGTATATGGTTGGCCCAGGGAATGGCACTGTTAGGAGGTGTGGCCATGTTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086377.9 ENSMUST00000183291.2 |
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| 3UTR TCA 72 bp | TGGGCCAACCATATACAAACCATAATATTCTCCTTCTaGATCTCTTGTCTCCCAGAGAACACTGTTGGGGGA | + |
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Preference number: 3 (lower is better) Translates to: WANHIQTIIFSF*ISCLPENTVGG Trigger: TCCCCCAACAGTGTTCTCTGGGAGACAAGAGATTCAGAAGGAGAATATTATGGTTTGTATATGGTTGGCCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086377.9 ENSMUST00000183291.2 |
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| 3UTR TCA 72 bp | GGATGGCAATATCCAAGACACTCTGGGCTATCCAGATaGAGTCTTCCCAAAGATGAAATGAAACAAAGACCA | + |
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Preference number: 3 (lower is better) Translates to: GWQYPRHSGLSR*SLPKDEMKQRP Trigger: TGGTCTTTGTTTCATTTCATCTTTGGGAAGACTTCATCTGGATAGCCCAGAGTGTCTTGGATATTGCCATCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086377.9 |
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| CDS-3UTR TCA 90 bp | GGTATTGCAGCCAGGCGGCAGCCTCTCCTGCTAGACGCCTCCAGTCCTTTGGGTCGGGGGCGCTCAGCTTaGAGCTCAGAGCCCGGGAGT | + |
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Preference number: 4 (lower is better) Translates to: GIAARRQPLLLDASSPLGRGRSA*SSEPGS Trigger: ACTCCCGGGCTCTGAGCTTCAAGCTGAGCGCCCCCG...ACCCAAAGGACTGGAGGCGTCTAGCAGGAGAGGCTGCCGCCTGGCTGCAATACC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086377.9 |
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| CDS-3UTR CCA 90 bp | CACCTTCCTGTCTTCTCTGGGTCAAGGCCCTGCAGCAGAGCAGGACATGCGTCTCTCCAGGGCATACTGTaGGGGCAGCGGGTCCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: HLPVFSGSRPCSRAGHASLQGIL*GQRVPQ Trigger: CTGGGGGACCCGCTGCCCCCACAGTATGCCCTGGAG...AGACGCATGTCCTGCTCTGCTGCAGGGCCTTGACCCAGAGAAGACAGGAAGGTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086377.9 ENSMUST00000183291.2 |
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| CDS-3UTR CCA 90 bp | TTTGGGCACCTTCCTGTCTTCTCTGGGTCAAGGCCCTGCAGCAGAGCAGGACATCTCCAGGGCATACTGTaGGGGCAGCGGGTCCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: FGHLPVFSGSRPCSRAGHLQGIL*GQRVPQ Trigger: CTGGGGGACCCGCTGCCCCCACAGTATGCCCTGGAG...ATGTCCTGCTCTGCTGCAGGGCCTTGACCCAGAGAAGACAGGAAGGTGCCCAAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086377.9 ENSMUST00000183291.2 |
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| CDS-3UTR TCA 90 bp | TCCCAGAGAACACTGTTGGGGGACAAGGCAGATAAAGCAGGCTGTGAGAAAGGCCGGGGGCGCTCAGCTTaGAGCTCAGAGCCCGGGAGT | + |
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Preference number: 4 (lower is better) Translates to: SQRTLLGDKADKAGCEKGRGRSA*SSEPGS Trigger: ACTCCCGGGCTCTGAGCTTCAAGCTGAGCGCCCCCG...GCCTTTCTCACAGCCTGCTTTATCTGCCTTGTCCCCCAACAGTGTTCTCTGGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000086377.9 ENSMUST00000183291.2 |
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| CDS-3UTR TCA 90 bp | ATGCCCAGTTCTTGTCCACTTGAGGATGGAAGGGAGGCAGGGCATAACAGGCCTCTCCCAGGAGCACACTaGGGAACCGTCCCTGTACTT | + |
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Preference number: 4 (lower is better) Translates to: MPSSCPLEDGREAGHNRPLPGAH*GTVPVL Trigger: AAGTACAGGGACGGTTCCTCAGTGTGCTCCTGGGAG...AGGCCTGTTATGCCCTGCCTCCCTTCCATCCTCAAGTGGACAAGAACTGGGCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183291.2 |
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| CDS-3UTR GCA 90 bp | ATGCCCAGTTCTTGTCCACTTGAGGATGGAAGGGAGGCAGGGCATAACAGGCCTCACAGTTGGTACCAGTaGGTGACCAGGCGGATGAGG | + |
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Preference number: 4 (lower is better) Translates to: MPSSCPLEDGREAGHNRPHSWYQ*VTRRMR Trigger: CCTCATCCGCCTGGTCACGCACTGGTACCAACTGTG...AGGCCTGTTATGCCCTGCCTCCCTTCCATCCTCAAGTGGACAAGAACTGGGCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086377.9 ENSMUST00000183291.2 |
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| CDS-3UTR GCA 90 bp | CACCTTCCTGTCTTCTCTGGGTCAAGGCCCTGCAGCAGAGCAGGACATGCGTCTTTAAAGCATGGGTATTaGAGCCAGGCGGCAGCCTCT | + |
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Preference number: 4 (lower is better) Translates to: HLPVFSGSRPCSRAGHASLKHGY*SQAAAS Trigger: AGAGGCTGCCGCCTGGCTGCAATACCCATGCTTTAA...AGACGCATGTCCTGCTCTGCTGCAGGGCCTTGACCCAGAGAAGACAGGAAGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183291.2 |
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| CDS-3UTR CCA 90 bp | AGGCAGATAAAGCAGGCTGTGAGAAAGGCTGTCTGTGCAGGGGTTGAGGGCAGGGGACTCCTTAAACTGTaGACCTCAAACTTCACTCCA | + |
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Preference number: 4 (lower is better) Translates to: RQIKQAVRKAVCAGVEGRGLLKL*TSNFTP Trigger: TGGAGTGAAGTTTGAGGTCCACAGTTTAAGGAGTCC...CCTGCCCTCAACCCCTGCACAGACAGCCTTTCTCACAGCCTGCTTTATCTGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086377.9 ENSMUST00000183291.2 |
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| CDS-3UTR CCA 90 bp | AGGCAGATAAAGCAGGCTGTGAGAAAGGCTGTCTGTGCAGGGGTTGAGGGCAGGACGGTTCAGAAGCCCTaGGCTGTGTTGAATTTAGTT | + |
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Preference number: 4 (lower is better) Translates to: RQIKQAVRKAVCAGVEGRTVQKP*AVLNLV Trigger: AACTAAATTCAACACAGCCCAGGGCTTCTGAACCGT...CCTGCCCTCAACCCCTGCACAGACAGCCTTTCTCACAGCCTGCTTTATCTGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183291.2 |
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| CDS-3UTR CCA 90 bp | CCAGGCAGGCATGGTGCAGGAGGAGCTGAGAGTTCTACATCTTCATCTGAAGGCGGACTCCTTAAACTGTaGACCTCAAACTTCACTCCA | + |
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Preference number: 4 (lower is better) Translates to: PGRHGAGGAESSTSSSEGGLLKL*TSNFTP Trigger: TGGAGTGAAGTTTGAGGTCCACAGTTTAAGGAGTCC...GCCTTCAGATGAAGATGTAGAACTCTCAGCTCCTCCTGCACCATGCCTGCCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086377.9 ENSMUST00000183291.2 |
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| 3UTR CAA 72 bp | ACAATAACCAGAAAATACGACAAAAGAGATACTTCGTaGGCACTGCAACCTCCGTCGGCACCTCCCAGGAGC | + |
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Preference number: 4 (lower is better) Translates to: TITRKYDKRDTS*ALQPPSAPPRS Trigger: GCTCCTGGGAGGTGCCGACGGAGGTTGCAGTGCCAACGAAGTATCTCTTTTGTCGTATTTTCTGGTTATTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086377.9 |
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| 3UTR CAA 72 bp | TCTCCTTCTGAATCTCTTGTCTCCCAGAGAACACTGTaGGGGGACAAGGCAGATAAAGCAGGCTGTGAGAAA | + |
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Preference number: 4 (lower is better) Translates to: SPSESLVSQRTL*GDKADKAGCEK Trigger: TTTCTCACAGCCTGCTTTATCTGCCTTGTCCCCCAACAGTGTTCTCTGGGAGACAAGAGATTCAGAAGGAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086377.9 ENSMUST00000183291.2 |
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| CDS-3UTR GCA 90 bp | AGAGAACACTGTTGGGGGACAAGGCAGATAAAGCAGGCTGTGAGAAAGGCTGTCTTTTTGAGCTGTTGGTaGAGGTATTCAGAGACCTCT | + |
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Preference number: 4 (lower is better) Translates to: REHCWGTRQIKQAVRKAVFLSCW*RYSETS Trigger: AGAGGTCTCTGAATACCTGCACCAACAGCTCAAAAA...GACAGCCTTTCTCACAGCCTGCTTTATCTGCCTTGTCCCCCAACAGTGTTCTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000183291.2 |
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| CDS-3UTR TCA 90 bp | ACAAACCATAATATTCTCCTTCTGAATCTCTTGTCTCCCAGAGAACACTGTTGGGCTGTTTGTACTTGGTaGCCAGTTCCAAGACGGTTC | + |
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Preference number: 4 (lower is better) Translates to: TNHNILLLNLLSPREHCWAVCTW*PVPRRF Trigger: GAACCGTCTTGGAACTGGTCACCAAGTACAAACAGC...CCAACAGTGTTCTCTGGGAGACAAGAGATTCAGAAGGAGAATATTATGGTTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183291.2 |
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| CDS-3UTR CAA 90 bp | GGGTTGAGGGCAGGGGACAGAAGCCTGGAGTCTGATCACAGGTTGGACCCTCCCGCGGTGCCTTTGCCCTaGACCCCTTTAGAGGCCCTC | + |
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Preference number: 5 (lower is better) Translates to: GLRAGDRSLESDHRLDPPAVPLP*TPLEAL Trigger: GAGGGCCTCTAAAGGGGTCAAGGGCAAAGGCACCGC...GGGAGGGTCCAACCTGTGATCAGACTCCAGGCTTCTGTCCCCTGCCCTCAACCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086377.9 ENSMUST00000183291.2 |
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| CDS-3UTR CAA 90 bp | TTCCTGTCTTCTCTGGGTCAAGGCCCTGCAGCAGAGCAGGACATGCGTCTGACTTCGGGGGCGCTCAGCTaGAAGCTCAGAGCCCGGGAG | + |
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Preference number: 5 (lower is better) Translates to: FLSSLGQGPAAEQDMRLTSGALS*KLRARE Trigger: CTCCCGGGCTCTGAGCTTCAAGCTGAGCGCCCCCGA...AGTCAGACGCATGTCCTGCTCTGCTGCAGGGCCTTGACCCAGAGAAGACAGGAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086377.9 ENSMUST00000183291.2 |
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| CDS-3UTR CAA 90 bp | AGAGAACACTGTTGGGGGACAAGGCAGATAAAGCAGGCTGTGAGAAAGGCTGTCTCGGGGGCGCTCAGCTaGAAGCTCAGAGCCCGGGAG | + |
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Preference number: 5 (lower is better) Translates to: REHCWGTRQIKQAVRKAVSGALS*KLRARE Trigger: CTCCCGGGCTCTGAGCTTCAAGCTGAGCGCCCCCGA...GACAGCCTTTCTCACAGCCTGCTTTATCTGCCTTGTCCCCCAACAGTGTTCTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000086377.9 ENSMUST00000183291.2 |
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| CDS-3UTR CAA 90 bp | GCACCTTCCTGTCTTCTCTGGGTCAAGGCCCTGCAGCAGAGCAGGACATGCGTCAACCGGCTATGTTCCTaGTTGGGTCAGTGGGGTCCA | + |
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Preference number: 5 (lower is better) Translates to: APSCLLWVKALQQSRTCVNRLCS*LGQWGP Trigger: TGGACCCCACTGACCCAACAAGGAACATAGCCGGTT...GACGCATGTCCTGCTCTGCTGCAGGGCCTTGACCCAGAGAAGACAGGAAGGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183291.2 |
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| CDS-3UTR CAA 90 bp | ACAGAAGCCTGGAGTCTGATCACAGGTTGGACCCTCCCTCTCTTGGGCTTTGGGGGCGCTTCAGCTTGGTaGGGCGACAGTTCAGGAAGT | + |
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Preference number: 5 (lower is better) Translates to: TEAWSLITGWTLPLLGFGGASAW*GDSSGS Trigger: ACTTCCTGAACTGTCGCCCAACCAAGCTGAAGCGCC...CCCAAAGCCCAAGAGAGGGAGGGTCCAACCTGTGATCAGACTCCAGGCTTCTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086377.9 ENSMUST00000183291.2 |
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| CDS-3UTR CAA 90 bp | AAACACATGCCCAGTTCTTGTCCACTTGAGGATGGAAGGGAGGCAGGGCATAACGCGGTGCCTTTGCCCTaGACCCCTTTAGAGGCCCTC | + |
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Preference number: 5 (lower is better) Translates to: KHMPSSCPLEDGREAGHNAVPLP*TPLEAL Trigger: GAGGGCCTCTAAAGGGGTCAAGGGCAAAGGCACCGC...GTTATGCCCTGCCTCCCTTCCATCCTCAAGTGGACAAGAACTGGGCATGTGTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086377.9 ENSMUST00000183291.2 |
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| CDS-3UTR CAA 90 bp | TGGACCCTCCCTCTCTTGGGCTTTGGGCACCTTCCTGTCTTCTCTGGGTCAAGGCTTCTCCTTACACAGTaGGTACCAGTGCGTGACCAG | + |
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Preference number: 5 (lower is better) Translates to: WTLPLLGFGHLPVFSGSRLLLTQ*VPVRDQ Trigger: CTGGTCACGCACTGGTACCAACTGTGTAAGGAGAAG...CCTTGACCCAGAGAAGACAGGAAGGTGCCCAAAGCCCAAGAGAGGGAGGGTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086377.9 ENSMUST00000183291.2 |
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| CDS TCA 90 bp | CTCAAAGCTGGTGAGATTGTTAAGGAACACCACCAGGTCAGCGTCTaGCCTGCCCTTGAGCGCGGTGCCTTTGCCCTTGACCCCTTTAGA | + |
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Preference number: 5 (lower is better) Translates to: LKAGEIVKEHHQVSV*PALERGAFALDPFR Trigger: TCTAAAGGGGTCAAGGGCAAAGGCACCGCGCTCAAGGGCAGGTCAGACGCTGACCTGGTGGTGTTCCTTAACAATCTCACCAGCTTTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086377.9 ENSMUST00000183291.2 |
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| CDS TCA 90 bp | ATGAGGCGCTTCAGCTTGGTTGGGCGACAGTTCAGGAAGTACTTCTaGAGCCCCATAAAGCAGATCGATAACTTGCCCTCCTTCCCGGCG | + |
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Preference number: 5 (lower is better) Translates to: MRRFSLVGRQFRKYF*SPIKQIDNLPSFPA Trigger: CGCCGGGAAGGAGGGCAAGTTATCGATCTGCTTTATGGGGCTTCAGAAGTACTTCCTGAACTGTCGCCCAACCAAGCTGAAGCGCCTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086377.9 |
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| CDS TCA 90 bp | ATGAGGCGCTTCAGCTTGGTTGGGCGACAGTTCAGGAAGTACTTCTaGAGCCCCATAAAGCAGATCGATAACTTGCCCTCCTTCCCCGGC | + |
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Preference number: 5 (lower is better) Translates to: MRRFSLVGRQFRKYF*SPIKQIDNLPSFPG Trigger: GCCGGGGAAGGAGGGCAAGTTATCGATCTGCTTTATGGGGCTTCAGAAGTACTTCCTGAACTGTCGCCCAACCAAGCTGAAGCGCCTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183291.2 |
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| CDS-3UTR CAA 90 bp | ACTCTGGAGCATCCTGGACAGGTCCCACTGGGCTCACAGGAAAACACATGCCCAAAGCCCTGGGCTGTGTaGAATTTAGTTACTCGACTC | + |
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Preference number: 5 (lower is better) Translates to: TLEHPGQVPLGSQENTCPKPWAV*NLVTRL Trigger: GAGTCGAGTAACTAAATTCAACACAGCCCAGGGCTT...TGGGCATGTGTTTTCCTGTGAGCCCAGTGGGACCTGTCCAGGATGCTCCAGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086377.9 ENSMUST00000183291.2 |
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| CDS-3UTR CAA 90 bp | AGAGAACACTGTTGGGGGACAAGGCAGATAAAGCAGGCTGTGAGAAAGGCTGTCCTTCTCCTTACACAGTaGGTACCAGTGCGTGACCAG | + |
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Preference number: 5 (lower is better) Translates to: REHCWGTRQIKQAVRKAVLLLTQ*VPVRDQ Trigger: CTGGTCACGCACTGGTACCAACTGTGTAAGGAGAAG...GACAGCCTTTCTCACAGCCTGCTTTATCTGCCTTGTCCCCCAACAGTGTTCTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086377.9 ENSMUST00000183291.2 |
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| CDS CCA 90 bp | AGCTGTTTGTACTTGGTGACCAGTTCCAAGACGGTTCAGAAGCCCTaGGCTGTGTTGAATTTAGTTACTCGACTCCCATACTCCCAGGCA | + |
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Preference number: 5 (lower is better) Translates to: SCLYLVTSSKTVQKP*AVLNLVTRLPYSQA Trigger: TGCCTGGGAGTATGGGAGTCGAGTAACTAAATTCAACACAGCCCAGGGCTTCTGAACCGTCTTGGAACTGGTCACCAAGTACAAACAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183291.2 |
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| CDS-3UTR CAA 90 bp | AGAGAACACTGTTGGGGGACAAGGCAGATAAAGCAGGCTGTGAGAAAGGCTGTCAAGCCCTGGGCTGTGTaGAATTTAGTTACTCGACTC | + |
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Preference number: 5 (lower is better) Translates to: REHCWGTRQIKQAVRKAVKPWAV*NLVTRL Trigger: GAGTCGAGTAACTAAATTCAACACAGCCCAGGGCTT...GACAGCCTTTCTCACAGCCTGCTTTATCTGCCTTGTCCCCCAACAGTGTTCTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086377.9 ENSMUST00000183291.2 |
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| CDS-3UTR CAA 90 bp | AACACATGCCCAGTTCTTGTCCACTTGAGGATGGAAGGGAGGCAGGGCATAACAACAGGCCTGTCTTTTTaGAGCTGTTGGTGCAGGTAT | + |
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Preference number: 5 (lower is better) Translates to: NTCPVLVHLRMEGRQGITTGLSF*SCWCRY Trigger: ATACCTGCACCAACAGCTCAAAAAAGACAGGCCTGT...TGTTATGCCCTGCCTCCCTTCCATCCTCAAGTGGACAAGAACTGGGCATGTGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000183291.2 |
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| CDS TCA 90 bp | CTTAAACTGTGGACCTCAAACTTCACTCCACAACGTCTCTCATGCTaGACCTCGCACAGCTGTTTCTTAATTTCCTTAATCAACACTCCC | + |
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Preference number: 5 (lower is better) Translates to: LKLWTSNFTPQRLSC*TSHSCFLISLINTP Trigger: GGGAGTGTTGATTAAGGAAATTAAGAAACAGCTGTGCGAGGTTCAGCATGAGAGACGTTGTGGAGTGAAGTTTGAGGTCCACAGTTTAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086377.9 ENSMUST00000183291.2 |
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| CDS CAA 90 bp | AACACCACCAGGTCAGCGTCTGACCTGCCCTTGAGCGCGGTGCCTTaGCCCTTGACCCCTTTAGAGGCCCTCATTCGGCGGACGGGGCCC | + |
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Preference number: 6 (lower is better) Translates to: NTTRSASDLPLSAVP*PLTPLEALIRRTGP Trigger: GGGCCCCGTCCGCCGAATGAGGGCCTCTAAAGGGGTCAAGGGCAAAGGCACCGCGCTCAAGGGCAGGTCAGACGCTGACCTGGTGGTGTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086377.9 ENSMUST00000183291.2 |
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| CDS CCA 72 bp | GGGGGCAGCGGGTCCCCCAGCTTCTCCTTACACAGTTaGTACCAGTGCGTGACCAGGCGGATGAGGCGCTTC | + |
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Preference number: 6 (lower is better) Translates to: GGSGSPSFSLHS*YQCVTRRMRRF Trigger: GAAGCGCCTCATCCGCCTGGTCACGCACTGGTACCAACTGTGTAAGGAGAAGCTGGGGGACCCGCTGCCCCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000086377.9 ENSMUST00000183291.2 |
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| CDS TCA 72 bp | ACTTCACCTCCTTCAGCAGGTCGGGGGCGCTCAGCTTaGAGCTCAGAGCCCGGGAGTTGGGACTCCTTAAAC | + |
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Preference number: 6 (lower is better) Translates to: TSPPSAGRGRSA*SSEPGSWDSLN Trigger: GTTTAAGGAGTCCCAACTCCCGGGCTCTGAGCTTCAAGCTGAGCGCCCCCGACCTGCTGAAGGAGGTGAAGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086377.9 ENSMUST00000183291.2 |
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| CDS CAA 90 bp | AGCACATCAAACTTCACCTCCTTCAGCAGGTCGGGGGCGCTCAGCTaGAAGCTCAGAGCCCGGGAGTTGGGACTCCTTAAACTGTGGACC | + |
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Preference number: 6 (lower is better) Translates to: STSNFTSFSRSGALS*KLRARELGLLKLWT Trigger: GGTCCACAGTTTAAGGAGTCCCAACTCCCGGGCTCTGAGCTTCAAGCTGAGCGCCCCCGACCTGCTGAAGGAGGTGAAGTTTGATGTGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086377.9 ENSMUST00000183291.2 |
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| CDS CAA 72 bp | AACTTCACCTCCTTCAGCAGGTCGGGGGCGCTCAGCTaGAAGCTCAGAGCCCGGGAGTTGGGACTCCTTAAA | + |
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Preference number: 6 (lower is better) Translates to: NFTSFSRSGALS*KLRARELGLLK Trigger: TTTAAGGAGTCCCAACTCCCGGGCTCTGAGCTTCAAGCTGAGCGCCCCCGACCTGCTGAAGGAGGTGAAGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086377.9 ENSMUST00000183291.2 |
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| CDS CAA 90 bp | TTCAGCAGGTCGGGGGCGCTCAGCTTGAAGCTCAGAGCCCGGGAGTaGGGACTCCTTAAACTGTGGACCTCAAACTTCACTCCACAACGT | + |
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Preference number: 6 (lower is better) Translates to: FSRSGALSLKLRARE*GLLKLWTSNFTPQR Trigger: ACGTTGTGGAGTGAAGTTTGAGGTCCACAGTTTAAGGAGTCCCAACTCCCGGGCTCTGAGCTTCAAGCTGAGCGCCCCCGACCTGCTGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086377.9 ENSMUST00000183291.2 |
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| CDS CAA 72 bp | TCGGGGGCGCTCAGCTTGAAGCTCAGAGCCCGGGAGTaGGGACTCCTTAAACTGTGGACCTCAAACTTCACT | + |
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Preference number: 6 (lower is better) Translates to: SGALSLKLRARE*GLLKLWTSNFT Trigger: AGTGAAGTTTGAGGTCCACAGTTTAAGGAGTCCCAACTCCCGGGCTCTGAGCTTCAAGCTGAGCGCCCCCGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086377.9 ENSMUST00000183291.2 |
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| CDS CCA 72 bp | TCTCTGAGGTCAGCACAGAAGCTGGTGTCCGGGAGATaGTTCTCTATGAACTTATCAAGCTTCGAGGCCGGG | + |
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Preference number: 6 (lower is better) Translates to: SLRSAQKLVSGR*FSMNLSSFEAG Trigger: CCCGGCCTCGAAGCTTGATAAGTTCATAGAGAACCATCTCCCGGACACCAGCTTCTGTGCTGACCTCAGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086377.9 ENSMUST00000183291.2 |
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| CDS CCA 72 bp | AAGCTCAGAGCCCGGGAGTTGGGACTCCTTAAACTGTaGACCTCAAACTTCACTCCACAACGTCTCTCATGC | + |
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Preference number: 6 (lower is better) Translates to: KLRARELGLLKL*TSNFTPQRLSC Trigger: GCATGAGAGACGTTGTGGAGTGAAGTTTGAGGTCCACAGTTTAAGGAGTCCCAACTCCCGGGCTCTGAGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086377.9 ENSMUST00000183291.2 |
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| CDS CAA 72 bp | ACCAGTTCCAAGACGGTTCAGAAGCCCTGGGCTGTGTaGAATTTAGTTACTCGACTCCCATACTCCCAGGCA | + |
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Preference number: 6 (lower is better) Translates to: TSSKTVQKPWAV*NLVTRLPYSQA Trigger: TGCCTGGGAGTATGGGAGTCGAGTAACTAAATTCAACACAGCCCAGGGCTTCTGAACCGTCTTGGAACTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183291.2 |
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| CDS CCA 72 bp | TACTTGGTGACCAGTTCCAAGACGGTTCAGAAGCCCTaGGCTGTGTTGAATTTAGTTACTCGACTCCCATAC | + |
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Preference number: 6 (lower is better) Translates to: YLVTSSKTVQKP*AVLNLVTRLPY Trigger: GTATGGGAGTCGAGTAACTAAATTCAACACAGCCCAGGGCTTCTGAACCGTCTTGGAACTGGTCACCAAGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183291.2 |
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| CDS TCA 72 bp | TGGACCTCAAACTTCACTCCACAACGTCTCTCATGCTaGACCTCGCACAGCTGTTTCTTAATTTCCTTAATC | + |
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Preference number: 6 (lower is better) Translates to: WTSNFTPQRLSC*TSHSCFLISLI Trigger: GATTAAGGAAATTAAGAAACAGCTGTGCGAGGTTCAGCATGAGAGACGTTGTGGAGTGAAGTTTGAGGTCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086377.9 ENSMUST00000183291.2 |
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