Pregenerated sensors for OAS1A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000052776Ensembl transcript IDs: ENSMUST00000080322.8
Found 32 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | GGACAGGAGTCAAACATGGCTGGCAGGCATCAGAAGCACGGAGTCTaGTGCCAGGTGGGGCCCTCCCTCACTGGGTCATGGGCCTGCAGC | + |
Preference number: 1 (lower is better) Translates to: GQESNMAGRHQKHGV*CQVGPSLTGSWACS Trigger: GCTGCAGGCCCATGACCCAGTGAGGGAGGGCCCCACCTGGCATCAGACTCCGTGCTTCTGATGCCTGCCAGCCATGTTTGACTCCTGTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080322.8 |
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3UTR CCA 90 bp | CTGTTGAGGAAGGCTGGCTGTGATTGGACAGGAGTCAAACATGGCTaGCAGGCATCAGAAGCACGGAGTCTGATGCCAGGTGGGGCCCTC | + |
Preference number: 1 (lower is better) Translates to: LLRKAGCDWTGVKHG*QASEARSLMPGGAL Trigger: GAGGGCCCCACCTGGCATCAGACTCCGTGCTTCTGATGCCTGCCAGCCATGTTTGACTCCTGTCCAATCACAGCCAGCCTTCCTCAACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080322.8 |
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3UTR GCA 90 bp | GAAGACACACACGCATGTGCATGGGCACACACACGCTCACACACCTaGACTGTTCTTGTATGGCCCACTCCTCAGAGTTCACACACCATG | + |
Preference number: 1 (lower is better) Translates to: EDTHACAWAHTRSHT*TVLVWPTPQSSHTM Trigger: CATGGTGTGTGAACTCTGAGGAGTGGGCCATACAAGAACAGTGCAGGTGTGTGAGCGTGTGTGTGCCCATGCACATGCGTGTGTGTCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080322.8 |
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3UTR TCA 90 bp | CCTGCACTGTTCTTGTATGGCCCACTCCTCAGAGTTCACACACCATaGCGGCACCTGCTGTGGTTTATTGTTGATCAGACTTTGTCAGAC | + |
Preference number: 1 (lower is better) Translates to: PALFLYGPLLRVHTP*RHLLWFIVDQTLSD Trigger: GTCTGACAAAGTCTGATCAACAATAAACCACAGCAGGTGCCGTCATGGTGTGTGAACTCTGAGGAGTGGGCCATACAAGAACAGTGCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080322.8 |
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3UTR GCA 90 bp | TCTTGTATGGCCCACTCCTCAGAGTTCACACACCATGACGGCACCTaGTGTGGTTTATTGTTGATCAGACTTTGTCAGACAGAACCTTCC | + |
Preference number: 1 (lower is better) Translates to: SCMAHSSEFTHHDGT*CGLLLIRLCQTEPS Trigger: GGAAGGTTCTGTCTGACAAAGTCTGATCAACAATAAACCACAGCAGGTGCCGTCATGGTGTGTGAACTCTGAGGAGTGGGCCATACAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080322.8 |
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3UTR CCA 90 bp | GGTTTATTGTTGATCAGACTTTGTCAGACAGAACCTTCCAACAGGTaGACAGATGGACACCAAGCGTGTGTTCTTTCCTCTCCTTCTGAA | + |
Preference number: 1 (lower is better) Translates to: GLLLIRLCQTEPSNR*TDGHQACVLSSPSE Trigger: TTCAGAAGGAGAGGAAAGAACACACGCTTGGTGTCCATCTGTCCACCTGTTGGAAGGTTCTGTCTGACAAAGTCTGATCAACAATAAACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080322.8 |
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3UTR TCA 90 bp | CTTGCATCAAAAAGCCTAGCAGTTAGGCTTTGCTCTAACCACTGCTaGACATCTGAATCATGTAGCATATGTAGTAAGTGCTCACTAAAT | + |
Preference number: 1 (lower is better) Translates to: LASKSLAVRLCSNHC*TSESCSICSKCSLN Trigger: ATTTAGTGAGCACTTACTACATATGCTACATGATTCAGATGTTCAGCAGTGGTTAGAGCAAAGCCTAACTGCTAGGCTTTTTGATGCAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080322.8 |
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3UTR CAA 90 bp | ATCTTGTCTTGGGGTCATGGGCAGAAGAAACCAAGGGTTCCTCTCTaGTGTGTATGTATAAGAAGAGACCTGGAAGGATCCCAATCCAAC | + |
Preference number: 2 (lower is better) Translates to: ILSWGHGQKKPRVPL*CVCIRRDLEGSQSN Trigger: GTTGGATTGGGATCCTTCCAGGTCTCTTCTTATACATACACACAAGAGAGGAACCCTTGGTTTCTTCTGCCCATGACCCCAAGACAAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080322.8 |
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3UTR-3UTR TCA 90 bp | TTGTGTGTATGTATAAGAAGAGACCTGGAAGGATCCCAATCCAACTTGCATCAAGAGGAAGGCTGGCTGTaGTTGGACAGGAGTCAAACA | + |
Preference number: 2 (lower is better) Translates to: LCVCIRRDLEGSQSNLHQEEGWL*LDRSQT Trigger: TGTTTGACTCCTGTCCAATCACAGCCAGCCTTCCTC...TTGATGCAAGTTGGATTGGGATCCTTCCAGGTCTCTTCTTATACATACACACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080322.8 |
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3UTR TCA 72 bp | CCCCAGCCTGCATGTTGTAGCCACTCAAGGGCACCCTaGGAGCACAGGCCACAATCTCAGTGTTCCATGTCC | + |
Preference number: 3 (lower is better) Translates to: PQPACCSHSRAP*EHRPQSQCSMS Trigger: GGACATGGAACACTGAGATTGTGGCCTGTGCTCTCAGGGTGCCCTTGAGTGGCTACAACATGCAGGCTGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080322.8 |
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CDS-3UTR TCA 90 bp | CAGGCATCAGAAGCACGGAGTCTGATGCCAGGTGGGGCCCTCCCTCACTGGGTCCACCAGGTCAGCGTCTaGCTTGCCCTTGAGTGTGGT | + |
Preference number: 4 (lower is better) Translates to: QASEARSLMPGGALPHWVHQVSV*LALECG Trigger: ACCACACTCAAGGGCAAGTCAGACGCTGACCTGGTG...GACCCAGTGAGGGAGGGCCCCACCTGGCATCAGACTCCGTGCTTCTGATGCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080322.8 |
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CDS-3UTR CCA 90 bp | GCACGGAGTCTGATGCCAGGTGGGGCCCTCCCTCACTGGGTCATGGGCCTGCAGCAGGACATCAAAGGCTaGCAGCACATCAAACTCCAC | + |
Preference number: 4 (lower is better) Translates to: ARSLMPGGALPHWVMGLQQDIKG*QHIKLH Trigger: GTGGAGTTTGATGTGCTGCCAGCCTTTGATGTCCTG...CTGCAGGCCCATGACCCAGTGAGGGAGGGCCCCACCTGGCATCAGACTCCGTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080322.8 |
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CDS-3UTR GCA 90 bp | CAGGCATCAGAAGCACGGAGTCTGATGCCAGGTGGGGCCCTCCCTCACTGGGTCCACAGTTGGTACCAGTaGTTGACCAGGCGGATGAGA | + |
Preference number: 4 (lower is better) Translates to: QASEARSLMPGGALPHWVHSWYQ*LTRRMR Trigger: TCTCATCCGCCTGGTCAAGCACTGGTACCAACTGTG...GACCCAGTGAGGGAGGGCCCCACCTGGCATCAGACTCCGTGCTTCTGATGCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080322.8 |
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CDS-3UTR CCA 90 bp | GCACGGAGTCTGATGCCAGGTGGGGCCCTCCCTCACTGGGTCATGGGCCTGCAGTTCTCCTTACACAGTTaGTACCAGTGCTTGACCAGG | + |
Preference number: 4 (lower is better) Translates to: ARSLMPGGALPHWVMGLQFSLHS*YQCLTR Trigger: CCTGGTCAAGCACTGGTACCAACTGTGTAAGGAGAA...CTGCAGGCCCATGACCCAGTGAGGGAGGGCCCCACCTGGCATCAGACTCCGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080322.8 |
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CDS-3UTR CCA 90 bp | GCACGGAGTCTGATGCCAGGTGGGGCCCTCCCTCACTGGGTCATGGGCCTGCAGGTCTGTGCAGGTATTTaGAGACCTCCTGGTGTTGAA | + |
Preference number: 4 (lower is better) Translates to: ARSLMPGGALPHWVMGLQVCAGI*RPPGVE Trigger: TTCAACACCAGGAGGTCTCCAAATACCTGCACAGAC...CTGCAGGCCCATGACCCAGTGAGGGAGGGCCCCACCTGGCATCAGACTCCGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080322.8 |
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CDS-3UTR TCA 90 bp | CAGGCATCAGAAGCACGGAGTCTGATGCCAGGTGGGGCCCTCCCTCACTGGGTCAGCCCTGGGCTGTGTTaGACTCATAACATCCATTCC | + |
Preference number: 4 (lower is better) Translates to: QASEARSLMPGGALPHWVSPGLC*THNIHS Trigger: GGAATGGATGTTATGAGTTCAACACAGCCCAGGGCT...GACCCAGTGAGGGAGGGCCCCACCTGGCATCAGACTCCGTGCTTCTGATGCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080322.8 |
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3UTR CAA 72 bp | TGGGGTCATGGGCAGAAGAAACCAAGGGTTCCTCTCTaGTGTGTATGTATAAGAAGAGACCTGGAAGGATCC | + |
Preference number: 4 (lower is better) Translates to: WGHGQKKPRVPL*CVCIRRDLEGS Trigger: GGATCCTTCCAGGTCTCTTCTTATACATACACACAAGAGAGGAACCCTTGGTTTCTTCTGCCCATGACCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080322.8 |
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CDS-3UTR CCA 90 bp | TGTGTATGTATAAGAAGAGACCTGGAAGGATCCCAATCCAACTTGCATCAAAAAGGCCACATTCCCTGTTaGGTCAGCTGGGTCCAGGAT | + |
Preference number: 4 (lower is better) Translates to: CVCIRRDLEGSQSNLHQKGHIPC*VSWVQD Trigger: ATCCTGGACCCAGCTGACCCAACAGGGAATGTGGCC...TTTTTGATGCAAGTTGGATTGGGATCCTTCCAGGTCTCTTCTTATACATACACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080322.8 |
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CDS-3UTR GCA 90 bp | CTTGTGTGTATGTATAAGAAGAGACCTGGAAGGATCCCAATCCAACTTGCATCATTTCTGAGCTGTCTGTaGAGGTATTTGGAGACCTCC | + |
Preference number: 4 (lower is better) Translates to: LVCMYKKRPGRIPIQLASFLSCL*RYLETS Trigger: GGAGGTCTCCAAATACCTGCACAGACAGCTCAGAAA...TGATGCAAGTTGGATTGGGATCCTTCCAGGTCTCTTCTTATACATACACACAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080322.8 |
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CDS-3UTR GCA 90 bp | TTGTGTGTATGTATAAGAAGAGACCTGGAAGGATCCCAATCCAACTTGCATCAACAGTTCTCTTCTACCTaGTCAAAAGGTACAGGAACC | + |
Preference number: 4 (lower is better) Translates to: LCVCIRRDLEGSQSNLHQQFSST*SKGTGT Trigger: GGTTCCTGTACCTTTTGAGCAGGTAGAAGAGAACTG...TTGATGCAAGTTGGATTGGGATCCTTCCAGGTCTCTTCTTATACATACACACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080322.8 |
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CDS TCA 90 bp | GGGGGCGCTCAGCTTGAAGCTCAGAGACCGGGCGTTGGGCCACCATaGACTCTGGACCTCAAACTTGACTCTAAAACGTCTCTCATGCTG | + |
Preference number: 5 (lower is better) Translates to: GGAQLEAQRPGVGPP*TLDLKLDSKTSLML Trigger: CAGCATGAGAGACGTTTTAGAGTCAAGTTTGAGGTCCAGAGTTCATGGTGGCCCAACGCCCGGTCTCTGAGCTTCAAGCTGAGCGCCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080322.8 |
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CDS-3UTR CAA 90 bp | TGTGTATGTATAAGAAGAGACCTGGAAGGATCCCAATCCAACTTGCATCAAAAACGGCCACATTCCCTGTaGGGTCAGCTGGGTCCAGGA | + |
Preference number: 5 (lower is better) Translates to: CVCIRRDLEGSQSNLHQKRPHSL*GQLGPG Trigger: TCCTGGACCCAGCTGACCCAACAGGGAATGTGGCCG...TTTTTGATGCAAGTTGGATTGGGATCCTTCCAGGTCTCTTCTTATACATACACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080322.8 |
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CDS-3UTR CAA 90 bp | CTCTTGTGTGTATGTATAAGAAGAGACCTGGAAGGATCCCAATCCAACTTGCATCTTCTCCTTACACAGTaGGTACCAGTGCTTGACCAG | + |
Preference number: 5 (lower is better) Translates to: LLCVCIRRDLEGSQSNLHLLLTQ*VPVLDQ Trigger: CTGGTCAAGCACTGGTACCAACTGTGTAAGGAGAAG...ATGCAAGTTGGATTGGGATCCTTCCAGGTCTCTTCTTATACATACACACAAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080322.8 |
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CDS TCA 90 bp | AGCTGTTTCTTAATTTCCTTGATGAACTCTCCCCGTCGGTTTAACTaGTCCTCAAAGCTGGTGAGATTGTTAAGGAACACCACCAGGTCA | + |
Preference number: 5 (lower is better) Translates to: SCFLISLMNSPRRFN*SSKLVRLLRNTTRS Trigger: TGACCTGGTGGTGTTCCTTAACAATCTCACCAGCTTTGAGGATCAGTTAAACCGACGGGGAGAGTTCATCAAGGAAATTAAGAAACAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080322.8 |
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CDS-3UTR CAA 90 bp | CTTGTGTGTATGTATAAGAAGAGACCTGGAAGGATCCCAATCCAACTTGCATCAATAACATCCATTCCCTaGTTCCCAGGCAAAGACAGT | + |
Preference number: 5 (lower is better) Translates to: LVCMYKKRPGRIPIQLASITSIP*FPGKDS Trigger: ACTGTCTTTGCCTGGGAACAAGGGAATGGATGTTAT...TGATGCAAGTTGGATTGGGATCCTTCCAGGTCTCTTCTTATACATACACACAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080322.8 |
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CDS-3UTR CAA 90 bp | CTCTTGTGTGTATGTATAAGAAGAGACCTGGAAGGATCCCAATCCAACTTGCATGGAGACCTCCTGGTGTaGAAAGTCATAATACTTTGT | + |
Preference number: 5 (lower is better) Translates to: LLCVCIRRDLEGSQSNLHGDLLV*KVIILC Trigger: ACAAAGTATTATGACTTTCAACACCAGGAGGTCTCC...ATGCAAGTTGGATTGGGATCCTTCCAGGTCTCTTCTTATACATACACACAAGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080322.8 |
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CDS CAA 90 bp | AACACCACCAGGTCAGCGTCTGACTTGCCCTTGAGTGTGGTGCCTTaGCCTGAGGAGCCACCCTTCACCACCTTGGAGACCCTCACTGGG | + |
Preference number: 6 (lower is better) Translates to: NTTRSASDLPLSVVP*PEEPPFTTLETLTG Trigger: CCCAGTGAGGGTCTCCAAGGTGGTGAAGGGTGGCTCCTCAGGCAAAGGCACCACACTCAAGGGCAAGTCAGACGCTGACCTGGTGGTGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080322.8 |
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CDS CAA 72 bp | AGGTCAGCGTCTGACTTGCCCTTGAGTGTGGTGCCTTaGCCTGAGGAGCCACCCTTCACCACCTTGGAGACC | + |
Preference number: 6 (lower is better) Translates to: RSASDLPLSVVP*PEEPPFTTLET Trigger: GGTCTCCAAGGTGGTGAAGGGTGGCTCCTCAGGCAAAGGCACCACACTCAAGGGCAAGTCAGACGCTGACCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080322.8 |
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CDS TCA 72 bp | ACTCGCCATCCTTCCCCAGGGAGGTACATTCCTCGATaGGGATGGCATAGATTCTGGGATCAGGCTTGCTGG | + |
Preference number: 6 (lower is better) Translates to: TRHPSPGRYIPR*GWHRFWDQACW Trigger: CCAGCAAGCCTGATCCCAGAATCTATGCCATCCTCATCGAGGAATGTACCTCCCTGGGGAAGGATGGCGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080322.8 |
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CDS TCA 72 bp | CATAACATCCATTCCCTTGTTCCCAGGCAAAGACAGTaGGCAACTCTAGGGCGTACTGTGGAGGCAATGGCT | + |
Preference number: 6 (lower is better) Translates to: HNIHSLVPRQRQ*ATLGRTVEAMA Trigger: AGCCATTGCCTCCACAGTACGCCCTAGAGTTGCTCACTGTCTTTGCCTGGGAACAAGGGAATGGATGTTATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080322.8 |
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CDS CCA 72 bp | GCTGGAAGTATTAACATGACCCAGGACATCAAAGGCTaGCAGCACATCAAACTCCACCTCCTGATGCAGATG | + |
Preference number: 6 (lower is better) Translates to: AGSINMTQDIKG*QHIKLHLLMQM Trigger: CATCTGCATCAGGAGGTGGAGTTTGATGTGCTGCCAGCCTTTGATGTCCTGGGTCATGTTAATACTTCCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080322.8 |
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CDS CAA 90 bp | GGCTTTTCTGAGCTGTCTGTGCAGGTATTTGGAGACCTCCTGGTGTaGAAAGTCATAATACTTTGTCCAGTAGATTCGAAGATGCTGATA | + |
Preference number: 6 (lower is better) Translates to: GFSELSVQVFGDLLV*KVIILCPVDSKMLI Trigger: TATCAGCATCTTCGAATCTACTGGACAAAGTATTATGACTTTCAACACCAGGAGGTCTCCAAATACCTGCACAGACAGCTCAGAAAAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080322.8 |