RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OAS1A (Mus musculus)

Ensembl gene IDs: ENSMUSG00000052776

Ensembl transcript IDs: ENSMUST00000080322.8

Found 32 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGACAGGAGTCAAACATGGCTGGCAGGCATCAGAAGCACGGAGTCTaGTGCCAGGTGGGGCCCTCCCTCACTGGGTCATGGGCCTGCAGC +
Preference number: 1 (lower is better)
Translates to: GQESNMAGRHQKHGV*CQVGPSLTGSWACS
Trigger: GCTGCAGGCCCATGACCCAGTGAGGGAGGGCCCCACCTGGCATCAGACTCCGTGCTTCTGATGCCTGCCAGCCATGTTTGACTCCTGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080322.8
3UTR CCA 90 bp CTGTTGAGGAAGGCTGGCTGTGATTGGACAGGAGTCAAACATGGCTaGCAGGCATCAGAAGCACGGAGTCTGATGCCAGGTGGGGCCCTC +
Preference number: 1 (lower is better)
Translates to: LLRKAGCDWTGVKHG*QASEARSLMPGGAL
Trigger: GAGGGCCCCACCTGGCATCAGACTCCGTGCTTCTGATGCCTGCCAGCCATGTTTGACTCCTGTCCAATCACAGCCAGCCTTCCTCAACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080322.8
3UTR GCA 90 bp GAAGACACACACGCATGTGCATGGGCACACACACGCTCACACACCTaGACTGTTCTTGTATGGCCCACTCCTCAGAGTTCACACACCATG +
Preference number: 1 (lower is better)
Translates to: EDTHACAWAHTRSHT*TVLVWPTPQSSHTM
Trigger: CATGGTGTGTGAACTCTGAGGAGTGGGCCATACAAGAACAGTGCAGGTGTGTGAGCGTGTGTGTGCCCATGCACATGCGTGTGTGTCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080322.8
3UTR TCA 90 bp CCTGCACTGTTCTTGTATGGCCCACTCCTCAGAGTTCACACACCATaGCGGCACCTGCTGTGGTTTATTGTTGATCAGACTTTGTCAGAC +
Preference number: 1 (lower is better)
Translates to: PALFLYGPLLRVHTP*RHLLWFIVDQTLSD
Trigger: GTCTGACAAAGTCTGATCAACAATAAACCACAGCAGGTGCCGTCATGGTGTGTGAACTCTGAGGAGTGGGCCATACAAGAACAGTGCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080322.8
3UTR GCA 90 bp TCTTGTATGGCCCACTCCTCAGAGTTCACACACCATGACGGCACCTaGTGTGGTTTATTGTTGATCAGACTTTGTCAGACAGAACCTTCC +
Preference number: 1 (lower is better)
Translates to: SCMAHSSEFTHHDGT*CGLLLIRLCQTEPS
Trigger: GGAAGGTTCTGTCTGACAAAGTCTGATCAACAATAAACCACAGCAGGTGCCGTCATGGTGTGTGAACTCTGAGGAGTGGGCCATACAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080322.8
3UTR CCA 90 bp GGTTTATTGTTGATCAGACTTTGTCAGACAGAACCTTCCAACAGGTaGACAGATGGACACCAAGCGTGTGTTCTTTCCTCTCCTTCTGAA +
Preference number: 1 (lower is better)
Translates to: GLLLIRLCQTEPSNR*TDGHQACVLSSPSE
Trigger: TTCAGAAGGAGAGGAAAGAACACACGCTTGGTGTCCATCTGTCCACCTGTTGGAAGGTTCTGTCTGACAAAGTCTGATCAACAATAAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080322.8
3UTR TCA 90 bp CTTGCATCAAAAAGCCTAGCAGTTAGGCTTTGCTCTAACCACTGCTaGACATCTGAATCATGTAGCATATGTAGTAAGTGCTCACTAAAT +
Preference number: 1 (lower is better)
Translates to: LASKSLAVRLCSNHC*TSESCSICSKCSLN
Trigger: ATTTAGTGAGCACTTACTACATATGCTACATGATTCAGATGTTCAGCAGTGGTTAGAGCAAAGCCTAACTGCTAGGCTTTTTGATGCAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000080322.8
3UTR CAA 90 bp ATCTTGTCTTGGGGTCATGGGCAGAAGAAACCAAGGGTTCCTCTCTaGTGTGTATGTATAAGAAGAGACCTGGAAGGATCCCAATCCAAC +
Preference number: 2 (lower is better)
Translates to: ILSWGHGQKKPRVPL*CVCIRRDLEGSQSN
Trigger: GTTGGATTGGGATCCTTCCAGGTCTCTTCTTATACATACACACAAGAGAGGAACCCTTGGTTTCTTCTGCCCATGACCCCAAGACAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080322.8
3UTR-3UTR TCA 90 bp TTGTGTGTATGTATAAGAAGAGACCTGGAAGGATCCCAATCCAACTTGCATCAAGAGGAAGGCTGGCTGTaGTTGGACAGGAGTCAAACA +
Preference number: 2 (lower is better)
Translates to: LCVCIRRDLEGSQSNLHQEEGWL*LDRSQT
Trigger: TGTTTGACTCCTGTCCAATCACAGCCAGCCTTCCTC...TTGATGCAAGTTGGATTGGGATCCTTCCAGGTCTCTTCTTATACATACACACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080322.8
3UTR TCA 72 bp CCCCAGCCTGCATGTTGTAGCCACTCAAGGGCACCCTaGGAGCACAGGCCACAATCTCAGTGTTCCATGTCC +
Preference number: 3 (lower is better)
Translates to: PQPACCSHSRAP*EHRPQSQCSMS
Trigger: GGACATGGAACACTGAGATTGTGGCCTGTGCTCTCAGGGTGCCCTTGAGTGGCTACAACATGCAGGCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080322.8
CDS-3UTR TCA 90 bp CAGGCATCAGAAGCACGGAGTCTGATGCCAGGTGGGGCCCTCCCTCACTGGGTCCACCAGGTCAGCGTCTaGCTTGCCCTTGAGTGTGGT +
Preference number: 4 (lower is better)
Translates to: QASEARSLMPGGALPHWVHQVSV*LALECG
Trigger: ACCACACTCAAGGGCAAGTCAGACGCTGACCTGGTG...GACCCAGTGAGGGAGGGCCCCACCTGGCATCAGACTCCGTGCTTCTGATGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080322.8
CDS-3UTR CCA 90 bp GCACGGAGTCTGATGCCAGGTGGGGCCCTCCCTCACTGGGTCATGGGCCTGCAGCAGGACATCAAAGGCTaGCAGCACATCAAACTCCAC +
Preference number: 4 (lower is better)
Translates to: ARSLMPGGALPHWVMGLQQDIKG*QHIKLH
Trigger: GTGGAGTTTGATGTGCTGCCAGCCTTTGATGTCCTG...CTGCAGGCCCATGACCCAGTGAGGGAGGGCCCCACCTGGCATCAGACTCCGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080322.8
CDS-3UTR GCA 90 bp CAGGCATCAGAAGCACGGAGTCTGATGCCAGGTGGGGCCCTCCCTCACTGGGTCCACAGTTGGTACCAGTaGTTGACCAGGCGGATGAGA +
Preference number: 4 (lower is better)
Translates to: QASEARSLMPGGALPHWVHSWYQ*LTRRMR
Trigger: TCTCATCCGCCTGGTCAAGCACTGGTACCAACTGTG...GACCCAGTGAGGGAGGGCCCCACCTGGCATCAGACTCCGTGCTTCTGATGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080322.8
CDS-3UTR CCA 90 bp GCACGGAGTCTGATGCCAGGTGGGGCCCTCCCTCACTGGGTCATGGGCCTGCAGTTCTCCTTACACAGTTaGTACCAGTGCTTGACCAGG +
Preference number: 4 (lower is better)
Translates to: ARSLMPGGALPHWVMGLQFSLHS*YQCLTR
Trigger: CCTGGTCAAGCACTGGTACCAACTGTGTAAGGAGAA...CTGCAGGCCCATGACCCAGTGAGGGAGGGCCCCACCTGGCATCAGACTCCGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080322.8
CDS-3UTR CCA 90 bp GCACGGAGTCTGATGCCAGGTGGGGCCCTCCCTCACTGGGTCATGGGCCTGCAGGTCTGTGCAGGTATTTaGAGACCTCCTGGTGTTGAA +
Preference number: 4 (lower is better)
Translates to: ARSLMPGGALPHWVMGLQVCAGI*RPPGVE
Trigger: TTCAACACCAGGAGGTCTCCAAATACCTGCACAGAC...CTGCAGGCCCATGACCCAGTGAGGGAGGGCCCCACCTGGCATCAGACTCCGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080322.8
CDS-3UTR TCA 90 bp CAGGCATCAGAAGCACGGAGTCTGATGCCAGGTGGGGCCCTCCCTCACTGGGTCAGCCCTGGGCTGTGTTaGACTCATAACATCCATTCC +
Preference number: 4 (lower is better)
Translates to: QASEARSLMPGGALPHWVSPGLC*THNIHS
Trigger: GGAATGGATGTTATGAGTTCAACACAGCCCAGGGCT...GACCCAGTGAGGGAGGGCCCCACCTGGCATCAGACTCCGTGCTTCTGATGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080322.8
3UTR CAA 72 bp TGGGGTCATGGGCAGAAGAAACCAAGGGTTCCTCTCTaGTGTGTATGTATAAGAAGAGACCTGGAAGGATCC +
Preference number: 4 (lower is better)
Translates to: WGHGQKKPRVPL*CVCIRRDLEGS
Trigger: GGATCCTTCCAGGTCTCTTCTTATACATACACACAAGAGAGGAACCCTTGGTTTCTTCTGCCCATGACCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080322.8
CDS-3UTR CCA 90 bp TGTGTATGTATAAGAAGAGACCTGGAAGGATCCCAATCCAACTTGCATCAAAAAGGCCACATTCCCTGTTaGGTCAGCTGGGTCCAGGAT +
Preference number: 4 (lower is better)
Translates to: CVCIRRDLEGSQSNLHQKGHIPC*VSWVQD
Trigger: ATCCTGGACCCAGCTGACCCAACAGGGAATGTGGCC...TTTTTGATGCAAGTTGGATTGGGATCCTTCCAGGTCTCTTCTTATACATACACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000080322.8
CDS-3UTR GCA 90 bp CTTGTGTGTATGTATAAGAAGAGACCTGGAAGGATCCCAATCCAACTTGCATCATTTCTGAGCTGTCTGTaGAGGTATTTGGAGACCTCC +
Preference number: 4 (lower is better)
Translates to: LVCMYKKRPGRIPIQLASFLSCL*RYLETS
Trigger: GGAGGTCTCCAAATACCTGCACAGACAGCTCAGAAA...TGATGCAAGTTGGATTGGGATCCTTCCAGGTCTCTTCTTATACATACACACAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080322.8
CDS-3UTR GCA 90 bp TTGTGTGTATGTATAAGAAGAGACCTGGAAGGATCCCAATCCAACTTGCATCAACAGTTCTCTTCTACCTaGTCAAAAGGTACAGGAACC +
Preference number: 4 (lower is better)
Translates to: LCVCIRRDLEGSQSNLHQQFSST*SKGTGT
Trigger: GGTTCCTGTACCTTTTGAGCAGGTAGAAGAGAACTG...TTGATGCAAGTTGGATTGGGATCCTTCCAGGTCTCTTCTTATACATACACACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080322.8
CDS TCA 90 bp GGGGGCGCTCAGCTTGAAGCTCAGAGACCGGGCGTTGGGCCACCATaGACTCTGGACCTCAAACTTGACTCTAAAACGTCTCTCATGCTG +
Preference number: 5 (lower is better)
Translates to: GGAQLEAQRPGVGPP*TLDLKLDSKTSLML
Trigger: CAGCATGAGAGACGTTTTAGAGTCAAGTTTGAGGTCCAGAGTTCATGGTGGCCCAACGCCCGGTCTCTGAGCTTCAAGCTGAGCGCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000080322.8
CDS-3UTR CAA 90 bp TGTGTATGTATAAGAAGAGACCTGGAAGGATCCCAATCCAACTTGCATCAAAAACGGCCACATTCCCTGTaGGGTCAGCTGGGTCCAGGA +
Preference number: 5 (lower is better)
Translates to: CVCIRRDLEGSQSNLHQKRPHSL*GQLGPG
Trigger: TCCTGGACCCAGCTGACCCAACAGGGAATGTGGCCG...TTTTTGATGCAAGTTGGATTGGGATCCTTCCAGGTCTCTTCTTATACATACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000080322.8
CDS-3UTR CAA 90 bp CTCTTGTGTGTATGTATAAGAAGAGACCTGGAAGGATCCCAATCCAACTTGCATCTTCTCCTTACACAGTaGGTACCAGTGCTTGACCAG +
Preference number: 5 (lower is better)
Translates to: LLCVCIRRDLEGSQSNLHLLLTQ*VPVLDQ
Trigger: CTGGTCAAGCACTGGTACCAACTGTGTAAGGAGAAG...ATGCAAGTTGGATTGGGATCCTTCCAGGTCTCTTCTTATACATACACACAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080322.8
CDS TCA 90 bp AGCTGTTTCTTAATTTCCTTGATGAACTCTCCCCGTCGGTTTAACTaGTCCTCAAAGCTGGTGAGATTGTTAAGGAACACCACCAGGTCA +
Preference number: 5 (lower is better)
Translates to: SCFLISLMNSPRRFN*SSKLVRLLRNTTRS
Trigger: TGACCTGGTGGTGTTCCTTAACAATCTCACCAGCTTTGAGGATCAGTTAAACCGACGGGGAGAGTTCATCAAGGAAATTAAGAAACAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080322.8
CDS-3UTR CAA 90 bp CTTGTGTGTATGTATAAGAAGAGACCTGGAAGGATCCCAATCCAACTTGCATCAATAACATCCATTCCCTaGTTCCCAGGCAAAGACAGT +
Preference number: 5 (lower is better)
Translates to: LVCMYKKRPGRIPIQLASITSIP*FPGKDS
Trigger: ACTGTCTTTGCCTGGGAACAAGGGAATGGATGTTAT...TGATGCAAGTTGGATTGGGATCCTTCCAGGTCTCTTCTTATACATACACACAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080322.8
CDS-3UTR CAA 90 bp CTCTTGTGTGTATGTATAAGAAGAGACCTGGAAGGATCCCAATCCAACTTGCATGGAGACCTCCTGGTGTaGAAAGTCATAATACTTTGT +
Preference number: 5 (lower is better)
Translates to: LLCVCIRRDLEGSQSNLHGDLLV*KVIILC
Trigger: ACAAAGTATTATGACTTTCAACACCAGGAGGTCTCC...ATGCAAGTTGGATTGGGATCCTTCCAGGTCTCTTCTTATACATACACACAAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080322.8
CDS CAA 90 bp AACACCACCAGGTCAGCGTCTGACTTGCCCTTGAGTGTGGTGCCTTaGCCTGAGGAGCCACCCTTCACCACCTTGGAGACCCTCACTGGG +
Preference number: 6 (lower is better)
Translates to: NTTRSASDLPLSVVP*PEEPPFTTLETLTG
Trigger: CCCAGTGAGGGTCTCCAAGGTGGTGAAGGGTGGCTCCTCAGGCAAAGGCACCACACTCAAGGGCAAGTCAGACGCTGACCTGGTGGTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080322.8
CDS CAA 72 bp AGGTCAGCGTCTGACTTGCCCTTGAGTGTGGTGCCTTaGCCTGAGGAGCCACCCTTCACCACCTTGGAGACC +
Preference number: 6 (lower is better)
Translates to: RSASDLPLSVVP*PEEPPFTTLET
Trigger: GGTCTCCAAGGTGGTGAAGGGTGGCTCCTCAGGCAAAGGCACCACACTCAAGGGCAAGTCAGACGCTGACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080322.8
CDS TCA 72 bp ACTCGCCATCCTTCCCCAGGGAGGTACATTCCTCGATaGGGATGGCATAGATTCTGGGATCAGGCTTGCTGG +
Preference number: 6 (lower is better)
Translates to: TRHPSPGRYIPR*GWHRFWDQACW
Trigger: CCAGCAAGCCTGATCCCAGAATCTATGCCATCCTCATCGAGGAATGTACCTCCCTGGGGAAGGATGGCGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080322.8
CDS TCA 72 bp CATAACATCCATTCCCTTGTTCCCAGGCAAAGACAGTaGGCAACTCTAGGGCGTACTGTGGAGGCAATGGCT +
Preference number: 6 (lower is better)
Translates to: HNIHSLVPRQRQ*ATLGRTVEAMA
Trigger: AGCCATTGCCTCCACAGTACGCCCTAGAGTTGCTCACTGTCTTTGCCTGGGAACAAGGGAATGGATGTTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080322.8
CDS CCA 72 bp GCTGGAAGTATTAACATGACCCAGGACATCAAAGGCTaGCAGCACATCAAACTCCACCTCCTGATGCAGATG +
Preference number: 6 (lower is better)
Translates to: AGSINMTQDIKG*QHIKLHLLMQM
Trigger: CATCTGCATCAGGAGGTGGAGTTTGATGTGCTGCCAGCCTTTGATGTCCTGGGTCATGTTAATACTTCCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080322.8
CDS CAA 90 bp GGCTTTTCTGAGCTGTCTGTGCAGGTATTTGGAGACCTCCTGGTGTaGAAAGTCATAATACTTTGTCCAGTAGATTCGAAGATGCTGATA +
Preference number: 6 (lower is better)
Translates to: GFSELSVQVFGDLLV*KVIILCPVDSKMLI
Trigger: TATCAGCATCTTCGAATCTACTGGACAAAGTATTATGACTTTCAACACCAGGAGGTCTCCAAATACCTGCACAGACAGCTCAGAAAAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080322.8