Pregenerated sensors for OAF (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032014Ensembl transcript IDs: ENSMUST00000034512.7, ENSMUST00000213286.2
Found 93 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGTGGCTTCAGGGCCAGCGGCTCAGGAAGAGACCTAAGACCTGATTaGGTTGCCACGCTCTCTGGTGGTCAGCGAAGAATTTGCAGGCCC | + |
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Preference number: 1 (lower is better) Translates to: CGFRASGSGRDLRPD*VATLSGGQRRICRP Trigger: GGGCCTGCAAATTCTTCGCTGACCACCAGAGAGCGTGGCAACCCAATCAGGTCTTAGGTCTCTTCCTGAGCCGCTGGCCCTGAAGCCACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034512.7 |
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| 3UTR GCA 90 bp | ACTGGTGTTTTGCTTGCATGTATGAGCTCCACGTACAAGGTCTCTTaGAAGCCAGAAGAGGGCATCAGATTTACCATGTGGGTCTTGAGC | + |
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Preference number: 1 (lower is better) Translates to: TGVLLACMSSTYKVS*KPEEGIRFTMWVLS Trigger: GCTCAAGACCCACATGGTAAATCTGATGCCCTCTTCTGGCTTGCAAGAGACCTTGTACGTGGAGCTCATACATGCAAGCAAAACACCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034512.7 |
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| 3UTR TCA 90 bp | TTATATAACTTACTTGTGTTTCCACTGGTGTTTTGCTTGCATGTATaGGCTCCACGTACAAGGTCTCTTGCAAGCCAGAAGAGGGCATCA | + |
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Preference number: 1 (lower is better) Translates to: LYNLLVFPLVFCLHV*APRTRSLASQKRAS Trigger: TGATGCCCTCTTCTGGCTTGCAAGAGACCTTGTACGTGGAGCTCATACATGCAAGCAAAACACCAGTGGAAACACAAGTAAGTTATATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034512.7 |
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| 3UTR CCA 90 bp | TTCGGTCCTTGCCTCATCATTTATATAACTTACTTGTGTTTCCACTaGTGTTTTGCTTGCATGTATGAGCTCCACGTACAAGGTCTCTTG | + |
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Preference number: 1 (lower is better) Translates to: FGPCLIIYITYLCFH*CFACMYELHVQGLL Trigger: CAAGAGACCTTGTACGTGGAGCTCATACATGCAAGCAAAACACCAGTGGAAACACAAGTAAGTTATATAAATGATGAGGCAAGGACCGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034512.7 |
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| 3UTR GCA 90 bp | CTCATCATTTATATAACTTACTTGTGTTTCCACTGGTGTTTTGCTTaGATGTATGAGCTCCACGTACAAGGTCTCTTGCAAGCCAGAAGA | + |
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Preference number: 1 (lower is better) Translates to: LIIYITYLCFHWCFA*MYELHVQGLLQARR Trigger: TCTTCTGGCTTGCAAGAGACCTTGTACGTGGAGCTCATACATGCAAGCAAAACACCAGTGGAAACACAAGTAAGTTATATAAATGATGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034512.7 |
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| 3UTR CCA 90 bp | TTTAATTTTATTATATGTGTTAGAGCACTTGGAGGCCATAAAAGGTaGCCGATCTCCATTATGTTGATGTTACAGGTGTCCGTGACACTC | + |
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Preference number: 1 (lower is better) Translates to: FNFIICVRALGGHKR*PISIMLMLQVSVTL Trigger: GAGTGTCACGGACACCTGTAACATCAACATAATGGAGATCGGCCACCTTTTATGGCCTCCAAGTGCTCTAACACATATAATAAAATTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034512.7 |
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| 3UTR CAA 90 bp | CTGAAGTATCCAAATTGGGTCTCAGGAAAGGCACACGCGGTGGTCTaGGAGGCAGCATCCCTACTCCCCGTTGCCCCCAGGGTAGAGAGA | + |
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Preference number: 2 (lower is better) Translates to: LKYPNWVSGKAHAVV*EAASLLPVAPRVER Trigger: TCTCTCTACCCTGGGGGCAACGGGGAGTAGGGATGCTGCCTCCAAGACCACCGCGTGTGCCTTTCCTGAGACCCAATTTGGATACTTCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034512.7 |
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| 3UTR-3UTR CCA 90 bp | CAGCTGTCCCTCTCTGGTTCCCTTGCTGGTGAGATAGTGTGCTACAGGGCCATGCCCAATGCCTCAAGATaGGCACAGGTGGGCATCAGG | + |
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Preference number: 2 (lower is better) Translates to: QLSLSGSLAGEIVCYRAMPNASR*AQVGIR Trigger: CCTGATGCCCACCTGTGCCCATCTTGAGGCATTGGG...CATGGCCCTGTAGCACACTATCTCACCAGCAAGGGAACCAGAGAGGGACAGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034512.7 |
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| 3UTR-3UTR TCA 90 bp | TGCCCGCTGAAGTATCCAAATTGGGTCTCAGGAAAGGCACACGCGGTGGTCTTGGCGGGACATTTCAGGTaGAAGGAAGAGGGGAGGGTA | + |
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Preference number: 2 (lower is better) Translates to: CPLKYPNWVSGKAHAVVLAGHFR*KEEGRV Trigger: TACCCTCCCCTCTTCCTTTCACCTGAAATGTCCCGC...CAAGACCACCGCGTGTGCCTTTCCTGAGACCCAATTTGGATACTTCAGCGGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034512.7 |
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| 3UTR-3UTR TCA 90 bp | GGGCATCAGATTTACCATGTGGGTCTTGAGCATGGAACATGGGATCTCTGGAAGTGGTTCCCTTGCTGGTaGGATAGTGTGCTACAGGGC | + |
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Preference number: 2 (lower is better) Translates to: GHQIYHVGLEHGTWDLWKWFPCW*DSVLQG Trigger: GCCCTGTAGCACACTATCTCACCAGCAAGGGAACCA...CTTCCAGAGATCCCATGTTCCATGCTCAAGACCCACATGGTAAATCTGATGCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034512.7 |
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| 3UTR-3UTR GCA 90 bp | CTTGCATGTATGAGCTCCACGTACAAGGTCTCTTGCAAGCCAGAAGAGGGCATCTTTCCTTGTACTTCATaGTCCCTCCCTGCCCCAGAA | + |
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Preference number: 2 (lower is better) Translates to: LACMSSTYKVSCKPEEGIFPCTS*SLPAPE Trigger: TTCTGGGGCAGGGAGGGAGCATGAAGTACAAGGAAA...GATGCCCTCTTCTGGCTTGCAAGAGACCTTGTACGTGGAGCTCATACATGCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034512.7 |
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| 3UTR-3UTR TCA 90 bp | TTGCTTGCATGTATGAGCTCCACGTACAAGGTCTCTTGCAAGCCAGAAGAGGGCAGTGTTCTTAATCACTaGGCCATCCTGAAGTCCCTA | + |
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Preference number: 2 (lower is better) Translates to: LLACMSSTYKVSCKPEEGSVLNH*AILKSL Trigger: TAGGGACTTCAGGATGGCTCAGTGATTAAGAACACT...GCCCTCTTCTGGCTTGCAAGAGACCTTGTACGTGGAGCTCATACATGCAAGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034512.7 |
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| 3UTR CAA 90 bp | AAAAAGCAGCACGTGCTCTTAACTACTGAGTCCTTCCCAGCTCCCTaGTTCCATCATCTTAAGCACAGAGCCTCTCACAGATCACACAAT | + |
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Preference number: 2 (lower is better) Translates to: KKQHVLLTTESFPAP*FHHLKHRASHRSHN Trigger: ATTGTGTGATCTGTGAGAGGCTCTGTGCTTAAGATGATGGAACAAGGGAGCTGGGAAGGACTCAGTAGTTAAGAGCACGTGCTGCTTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034512.7 |
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| 3UTR-3UTR CCA 90 bp | TCCATCATCTTAAGCACAGAGCCTCTCACAGATCACACAATAGGACCTTTAGAACTGAAGTATCCAAATTaGGTCTCAGGAAAGGCACAC | + |
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Preference number: 2 (lower is better) Translates to: SIILSTEPLTDHTIGPLELKYPN*VSGKAH Trigger: GTGTGCCTTTCCTGAGACCCAATTTGGATACTTCAG...TTCTAAAGGTCCTATTGTGTGATCTGTGAGAGGCTCTGTGCTTAAGATGATGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034512.7 |
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| 3UTR CAA 90 bp | CCCATCCTGAGCAAATTCGCTATAAATGAGCTATGTCTTCGGTCCTaGCCTCATCATTTATATAACTTACTTGTGTTTCCACTGGTGTTT | + |
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Preference number: 2 (lower is better) Translates to: PILSKFAINELCLRS*PHHLYNLLVFPLVF Trigger: AAACACCAGTGGAAACACAAGTAAGTTATATAAATGATGAGGCAAGGACCGAAGACATAGCTCATTTATAGCGAATTTGCTCAGGATGGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034512.7 |
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| 3UTR CCA 72 bp | CAAATTGGGTCTCAGGAAAGGCACACGCGGTGGTCTTaGAGGCAGCATCCCTACTCCCCGTTGCCCCCAGGG | + |
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Preference number: 3 (lower is better) Translates to: QIGSQERHTRWS*RQHPYSPLPPG Trigger: CCCTGGGGGCAACGGGGAGTAGGGATGCTGCCTCCAAGACCACCGCGTGTGCCTTTCCTGAGACCCAATTTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034512.7 |
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| 3UTR TCA 72 bp | GAGTCCCCAGCTGTCCCTCTCTGGTTCCCTTGCTGGTaGGATAGTGTGCTACAGGGCCATGCCTCCGGAACA | + |
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Preference number: 3 (lower is better) Translates to: ESPAVPLWFPCW*DSVLQGHASGT Trigger: TGTTCCGGAGGCATGGCCCTGTAGCACACTATCTCACCAGCAAGGGAACCAGAGAGGGACAGCTGGGGACTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034512.7 |
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| 3UTR TCA 72 bp | GCACAGGTGGGCATCAGGGCTGCCTCAAGGTTGCGGTaGCACCCTTTCACAGTCATGCAGATGAGGTTGTGG | + |
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Preference number: 3 (lower is better) Translates to: AQVGIRAASRLR*HPFTVMQMRLW Trigger: CCACAACCTCATCTGCATGACTGTGAAAGGGTGTCACCGCAACCTTGAGGCAGCCCTGATGCCCACCTGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034512.7 |
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| 3UTR CCA 72 bp | AGTATCCAAATTGGGTCTCAGGAAAGGCACACGCGGTaGTCTTGGAGGCAGCATCCCTACTCCCCGTTGCCC | + |
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Preference number: 3 (lower is better) Translates to: SIQIGSQERHTR*SWRQHPYSPLP Trigger: GGGCAACGGGGAGTAGGGATGCTGCCTCCAAGACCACCGCGTGTGCCTTTCCTGAGACCCAATTTGGATACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034512.7 |
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| 3UTR GCA 72 bp | CAATGCCTCAAGATGGGCACAGGTGGGCATCAGGGCTaGCTCAAGGTTGCGGTGACACCCTTTCACAGTCAT | + |
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Preference number: 3 (lower is better) Translates to: QCLKMGTGGHQG*LKVAVTPFHSH Trigger: ATGACTGTGAAAGGGTGTCACCGCAACCTTGAGGCAGCCCTGATGCCCACCTGTGCCCATCTTGAGGCATTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034512.7 |
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| 3UTR CCA 72 bp | AGGGCCAGCGGCTCAGGAAGAGACCTAAGACCTGATTaGGTTGCCACGCTCTCTGGTGGTCAGCGAAGAATT | + |
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Preference number: 3 (lower is better) Translates to: RASGSGRDLRPD*VATLSGGQRRI Trigger: AATTCTTCGCTGACCACCAGAGAGCGTGGCAACCCAATCAGGTCTTAGGTCTCTTCCTGAGCCGCTGGCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034512.7 |
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| 3UTR GCA 72 bp | TGGGTTGCCACGCTCTCTGGTGGTCAGCGAAGAATTTaGAGGCCCAAGTATCCGTTCTTGGTCCTCTGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: WVATLSGGQRRI*RPKYPFLVLCL Trigger: GAGACAGAGGACCAAGAACGGATACTTGGGCCTGCAAATTCTTCGCTGACCACCAGAGAGCGTGGCAACCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034512.7 ENSMUST00000213286.2 |
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| 3UTR TCA 72 bp | TACATCAGTCCAGGGGCAGGAAGAATCGGTGCCCGCTaGAGTATCCAAATTGGGTCTCAGGAAAGGCACACG | + |
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Preference number: 3 (lower is better) Translates to: YISPGAGRIGAR*SIQIGSQERHT Trigger: CGTGTGCCTTTCCTGAGACCCAATTTGGATACTTCAGCGGGCACCGATTCTTCCTGCCCCTGGACTGATGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034512.7 |
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| 3UTR TCA 72 bp | GTGCATTTTGATTCCACCTTCGCGGGACATTTCAGGTaGAAGGAAGAGGGGAGGGTATCCGTCTGGAGAACT | + |
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Preference number: 3 (lower is better) Translates to: VHFDSTFAGHFR*KEEGRVSVWRT Trigger: AGTTCTCCAGACGGATACCCTCCCCTCTTCCTTTCACCTGAAATGTCCCGCGAAGGTGGAATCAAAATGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034512.7 |
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| 3UTR TCA 72 bp | AGCCAGAAGAGGGCATCAGATTTACCATGTGGGTCTTaGGCATGGAACATGGGATCTCTGGAAGAGCAGCCA | + |
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Preference number: 3 (lower is better) Translates to: SQKRASDLPCGS*AWNMGSLEEQP Trigger: TGGCTGCTCTTCCAGAGATCCCATGTTCCATGCTCAAGACCCACATGGTAAATCTGATGCCCTCTTCTGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034512.7 |
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| 3UTR GCA 72 bp | ACCAAAGTACATCAGTCCAGGGGCAGGAAGAATCGGTaGCCGCTGAAGTATCCAAATTGGGTCTCAGGAAAG | + |
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Preference number: 3 (lower is better) Translates to: TKVHQSRGRKNR*PLKYPNWVSGK Trigger: CTTTCCTGAGACCCAATTTGGATACTTCAGCGGGCACCGATTCTTCCTGCCCCTGGACTGATGTACTTTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034512.7 |
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| 3UTR-3UTR CAA 90 bp | TTCCCAGCTCCCTTGTTCCATCATCTTAAGCACAGAGCCTCTCACAGATCACACGCTGAAGTATCCAAATaGGGTCTCAGGAAAGGCACA | + |
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Preference number: 3 (lower is better) Translates to: FPAPLFHHLKHRASHRSHAEVSK*GLRKGT Trigger: TGTGCCTTTCCTGAGACCCAATTTGGATACTTCAGC...GTGTGATCTGTGAGAGGCTCTGTGCTTAAGATGATGGAACAAGGGAGCTGGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034512.7 |
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| 3UTR GCA 72 bp | TTGCTTGCATGTATGAGCTCCACGTACAAGGTCTCTTaGAAGCCAGAAGAGGGCATCAGATTTACCATGTGG | + |
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Preference number: 3 (lower is better) Translates to: LLACMSSTYKVS*KPEEGIRFTMW Trigger: CCACATGGTAAATCTGATGCCCTCTTCTGGCTTGCAAGAGACCTTGTACGTGGAGCTCATACATGCAAGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034512.7 |
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| 3UTR CCA 72 bp | TCTTGCAAGCCAGAAGAGGGCATCAGATTTACCATGTaGGTCTTGAGCATGGAACATGGGATCTCTGGAAGA | + |
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Preference number: 3 (lower is better) Translates to: SCKPEEGIRFTM*VLSMEHGISGR Trigger: TCTTCCAGAGATCCCATGTTCCATGCTCAAGACCCACATGGTAAATCTGATGCCCTCTTCTGGCTTGCAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034512.7 |
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| 3UTR-3UTR CAA 90 bp | TTCCCAGCTCCCTTGTTCCATCATCTTAAGCACAGAGCCTCTCACAGATCACACGAATTCAAGTTTTCCTaGTACTTCATGCTCCCTCCC | + |
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Preference number: 3 (lower is better) Translates to: FPAPLFHHLKHRASHRSHEFKFS*YFMLPP Trigger: GGGAGGGAGCATGAAGTACAAGGAAAACTTGAATTC...GTGTGATCTGTGAGAGGCTCTGTGCTTAAGATGATGGAACAAGGGAGCTGGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034512.7 |
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| 3UTR TCA 72 bp | TTACTTGTGTTTCCACTGGTGTTTTGCTTGCATGTATaGGCTCCACGTACAAGGTCTCTTGCAAGCCAGAAG | + |
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Preference number: 3 (lower is better) Translates to: LLVFPLVFCLHV*APRTRSLASQK Trigger: CTTCTGGCTTGCAAGAGACCTTGTACGTGGAGCTCATACATGCAAGCAAAACACCAGTGGAAACACAAGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034512.7 |
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| 3UTR TCA 72 bp | CATGGCCTTGCCCATCCTGAGCAAATTCGCTATAAATaGGCTATGTCTTCGGTCCTTGCCTCATCATTTATA | + |
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Preference number: 3 (lower is better) Translates to: HGLAHPEQIRYK*AMSSVLASSFI Trigger: TATAAATGATGAGGCAAGGACCGAAGACATAGCTCATTTATAGCGAATTTGCTCAGGATGGGCAAGGCCATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034512.7 |
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| 3UTR TCA 72 bp | GGGATCTCTGGAAGAGCAGCCAGTGTTCTTAATCACTaGGCCATCCTGAAGTCCCTAGTTTTTAATTTTAAA | + |
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Preference number: 3 (lower is better) Translates to: GISGRAASVLNH*AILKSLVFNFK Trigger: TTTAAAATTAAAAACTAGGGACTTCAGGATGGCTCAGTGATTAAGAACACTGGCTGCTCTTCCAGAGATCCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034512.7 |
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| 3UTR GCA 72 bp | TATATAACTTACTTGTGTTTCCACTGGTGTTTTGCTTaGATGTATGAGCTCCACGTACAAGGTCTCTTGCAA | + |
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Preference number: 3 (lower is better) Translates to: YITYLCFHWCFA*MYELHVQGLLQ Trigger: TTGCAAGAGACCTTGTACGTGGAGCTCATACATGCAAGCAAAACACCAGTGGAAACACAAGTAAGTTATATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034512.7 |
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| 3UTR CCA 72 bp | TGCCTCATCATTTATATAACTTACTTGTGTTTCCACTaGTGTTTTGCTTGCATGTATGAGCTCCACGTACAA | + |
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Preference number: 3 (lower is better) Translates to: CLIIYITYLCFH*CFACMYELHVQ Trigger: TTGTACGTGGAGCTCATACATGCAAGCAAAACACCAGTGGAAACACAAGTAAGTTATATAAATGATGAGGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034512.7 |
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| 3UTR CAA 72 bp | CCAAATTGGGTCTCAGGAAAGGCACACGCGGTGGTCTaGGAGGCAGCATCCCTACTCCCCGTTGCCCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: PNWVSGKAHAVV*EAASLLPVAPR Trigger: CCTGGGGGCAACGGGGAGTAGGGATGCTGCCTCCAAGACCACCGCGTGTGCCTTTCCTGAGACCCAATTTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034512.7 |
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| CDS-3UTR GCA 90 bp | GTATCCAAATTGGGTCTCAGGAAAGGCACACGCGGTGGTCTTGGAGGCAGCATCCTCAGCCTGCCGCACTaGGCGGGGGTTTTTCTGCCG | + |
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Preference number: 4 (lower is better) Translates to: VSKLGLRKGTRGGLGGSILSLPH*AGVFLP Trigger: CGGCAGAAAAACCCCCGCGCAGTGCGGCAGGCTGAG...GATGCTGCCTCCAAGACCACCGCGTGTGCCTTTCCTGAGACCCAATTTGGATAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000034512.7 |
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| CDS-3UTR GCA 90 bp | TTGCCACGCTCTCTGGTGGTCAGCGAAGAATTTGCAGGCCCAAGTATCCGTTCTGCGCGGGGGTTTTTCTaGCGGAGCTTGGCCATGGCC | + |
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Preference number: 4 (lower is better) Translates to: LPRSLVVSEEFAGPSIRSARGFF*RSLAMA Trigger: GGCCATGGCCAAGCTCCGGCAGAAAAACCCCCGCGC...AGAACGGATACTTGGGCCTGCAAATTCTTCGCTGACCACCAGAGAGCGTGGCAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000034512.7 |
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| CDS-3UTR CCA 90 bp | CCCAGGGTAGAGAGAAGGCACTGTAACCAGACACAGGAGCTGGGGCACGAGTCCATACTTGAGCATGCATaGGTACCAGGCCAGGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: PRVERRHCNQTQELGHESILEHA*VPGQAQ Trigger: CTGAGCCTGGCCTGGTACCCATGCATGCTCAAGTAT...GGACTCGTGCCCCAGCTCCTGTGTCTGGTTACAGTGCCTTCTCTCTACCCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034512.7 |
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| CDS-3UTR CCA 90 bp | GGGTTGCCACGCTCTCTGGTGGTCAGCGAAGAATTTGCAGGCCCAAGTATCCGTACACTTGTAGGGCGCTaGCCGATCACGACTGTGGCA | + |
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Preference number: 4 (lower is better) Translates to: GLPRSLVVSEEFAGPSIRTLVGR*PITTVA Trigger: TGCCACAGTCGTGATCGGCCAGCGCCCTACAAGTGT...ACGGATACTTGGGCCTGCAAATTCTTCGCTGACCACCAGAGAGCGTGGCAACCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034512.7 ENSMUST00000213286.2 |
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| CDS-3UTR TCA 90 bp | TGCCCGCTGAAGTATCCAAATTGGGTCTCAGGAAAGGCACACGCGGTGGTCTTGTGGCCTCACTGGGGATaGTGTCATTGTGGTGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: CPLKYPNWVSGKAHAVVLWPHWG*CHCGAA Trigger: GGCTGCACCACAATGACATCATCCCCAGTGAGGCCA...CAAGACCACCGCGTGTGCCTTTCCTGAGACCCAATTTGGATACTTCAGCGGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034512.7 |
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| CDS-3UTR CCA 90 bp | TTGCCACGCTCTCTGGTGGTCAGCGAAGAATTTGCAGGCCCAAGTATCCGTTCTCCTGGCGGGTGTAGATaGCATCTGTGGCCTCAGCAC | + |
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Preference number: 4 (lower is better) Translates to: LPRSLVVSEEFAGPSIRSPGGCR*HLWPQH Trigger: GTGCTGAGGCCACAGATGCCATCTACACCCGCCAGG...AGAACGGATACTTGGGCCTGCAAATTCTTCGCTGACCACCAGAGAGCGTGGCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034512.7 ENSMUST00000213286.2 |
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| 3UTR CAA 72 bp | GGGCAGGAAGAATCGGTGCCCGCTGAAGTATCCAAATaGGGTCTCAGGAAAGGCACACGCGGTGGTCTTGGA | + |
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Preference number: 4 (lower is better) Translates to: GQEESVPAEVSK*GLRKGTRGGLG Trigger: TCCAAGACCACCGCGTGTGCCTTTCCTGAGACCCAATTTGGATACTTCAGCGGGCACCGATTCTTCCTGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034512.7 |
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| CDS-3UTR CCA 90 bp | GGGTTGCCACGCTCTCTGGTGGTCAGCGAAGAATTTGCAGGCCCAAGTATCCGTATACTTGAGCATGCATaGGTACCAGGCCAGGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: GLPRSLVVSEEFAGPSIRILEHA*VPGQAQ Trigger: CTGAGCCTGGCCTGGTACCCATGCATGCTCAAGTAT...ACGGATACTTGGGCCTGCAAATTCTTCGCTGACCACCAGAGAGCGTGGCAACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034512.7 ENSMUST00000213286.2 |
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| CDS-3UTR TCA 90 bp | GTTGCCACGCTCTCTGGTGGTCAGCGAAGAATTTGCAGGCCCAAGTATCCGTTCGACTGTGGCAATACTTaGGCATGCATGGGTACCAGG | + |
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Preference number: 4 (lower is better) Translates to: VATLSGGQRRICRPKYPFDCGNT*ACMGTR Trigger: CCTGGTACCCATGCATGCTCAAGTATTGCCACAGTC...GAACGGATACTTGGGCCTGCAAATTCTTCGCTGACCACCAGAGAGCGTGGCAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034512.7 ENSMUST00000213286.2 |
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| CDS-3UTR TCA 90 bp | CCACGCTCTCTGGTGGTCAGCGAAGAATTTGCAGGCCCAAGTATCCGTTCTTGGGACTGTGGCAATACTTaGGCATGCATGGGTACCAGG | + |
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Preference number: 4 (lower is better) Translates to: PRSLVVSEEFAGPSIRSWDCGNT*ACMGTR Trigger: CCTGGTACCCATGCATGCTCAAGTATTGCCACAGTC...CCAAGAACGGATACTTGGGCCTGCAAATTCTTCGCTGACCACCAGAGAGCGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034512.7 ENSMUST00000213286.2 |
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| CDS-3UTR CCA 90 bp | TCAGCGAAGAATTTGCAGGCCCAAGTATCCGTTCTTGGTCCTCTGTCTCCTGTTCGCTCTGTCCAGAACTaGACATCCTCCTGGCGGGTG | + |
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Preference number: 4 (lower is better) Translates to: SAKNLQAQVSVLGPLSPVRSVQN*TSSWRV Trigger: CACCCGCCAGGAGGATGTCCAGTTCTGGACAGAGCG...AACAGGAGACAGAGGACCAAGAACGGATACTTGGGCCTGCAAATTCTTCGCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034512.7 ENSMUST00000213286.2 |
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| 3UTR CAA 72 bp | TTGGGTTGCCACGCTCTCTGGTGGTCAGCGAAGAATTaGCAGGCCCAAGTATCCGTTCTTGGTCCTCTGTCT | + |
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Preference number: 4 (lower is better) Translates to: LGCHALWWSAKN*QAQVSVLGPLS Trigger: AGACAGAGGACCAAGAACGGATACTTGGGCCTGCAAATTCTTCGCTGACCACCAGAGAGCGTGGCAACCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034512.7 ENSMUST00000213286.2 |
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| CDS-3UTR TCA 90 bp | TGGAACATGGGATCTCTGGAAGAGCAGCCAGTGTTCTTAATCACTGAGCCATCCCAAAGTGCCTGGAACTaGCTCTGCCCCTTCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: WNMGSLEEQPVFLITEPSQSAWN*LCPFSS Trigger: GCTGGAGAAGGGGCAGAGTCAGTTCCAGGCACTTTG...GGATGGCTCAGTGATTAAGAACACTGGCTGCTCTTCCAGAGATCCCATGTTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034512.7 |
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| CDS-3UTR CCA 90 bp | AGACCTGATTGGGTTGCCACGCTCTCTGGTGGTCAGCGAAGAATTTGCAGGCCCTGTAGATGGCATCTGTaGCCTCAGCACATACGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: RPDWVATLSGGQRRICRPCRWHL*PQHIRC Trigger: ACAACGTATGTGCTGAGGCCACAGATGCCATCTACA...GGGCCTGCAAATTCTTCGCTGACCACCAGAGAGCGTGGCAACCCAATCAGGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034512.7 ENSMUST00000213286.2 |
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| CDS-3UTR CCA 90 bp | CTGATTGGGTTGCCACGCTCTCTGGTGGTCAGCGAAGAATTTGCAGGCCCAAGTCCTGTTCTAATGCCTTaGGCAGAGCCTCGAAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: LIGLPRSLVVSEEFAGPSPVLMP*AEPRKQ Trigger: CTGTTTTCGAGGCTCTGCCCAAGGCATTAGAACAGG...ACTTGGGCCTGCAAATTCTTCGCTGACCACCAGAGAGCGTGGCAACCCAATCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034512.7 ENSMUST00000213286.2 |
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| CDS-3UTR CCA 90 bp | CCACGCTCTCTGGTGGTCAGCGAAGAATTTGCAGGCCCAAGTATCCGTTCTTGGGGCCGATCACGACTGTaGCAATACTTGAGCATGCAT | + |
|
Preference number: 4 (lower is better) Translates to: PRSLVVSEEFAGPSIRSWGRSRL*QYLSMH Trigger: ATGCATGCTCAAGTATTGCCACAGTCGTGATCGGCC...CCAAGAACGGATACTTGGGCCTGCAAATTCTTCGCTGACCACCAGAGAGCGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034512.7 ENSMUST00000213286.2 |
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| CDS-3UTR CCA 90 bp | TGGAACATGGGATCTCTGGAAGAGCAGCCAGTGTTCTTAATCACTGAGCCATCCACACTTGTAGGGCGCTaGCCGATCACGACTGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: WNMGSLEEQPVFLITEPSTLVGR*PITTVA Trigger: TGCCACAGTCGTGATCGGCCAGCGCCCTACAAGTGT...GGATGGCTCAGTGATTAAGAACACTGGCTGCTCTTCCAGAGATCCCATGTTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034512.7 |
||
| 3UTR CAA 72 bp | AAGCCAGAAGAGGGCATCAGATTTACCATGTGGGTCTaGAGCATGGAACATGGGATCTCTGGAAGAGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: KPEEGIRFTMWV*SMEHGISGRAA Trigger: GGCTGCTCTTCCAGAGATCCCATGTTCCATGCTCAAGACCCACATGGTAAATCTGATGCCCTCTTCTGGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034512.7 |
||
| CDS-3UTR CCA 90 bp | CTTGCATGTATGAGCTCCACGTACAAGGTCTCTTGCAAGCCAGAAGAGGGCATCTGTAGATGGCATCTGTaGCCTCAGCACATACGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LACMSSTYKVSCKPEEGICRWHL*PQHIRC Trigger: ACAACGTATGTGCTGAGGCCACAGATGCCATCTACA...GATGCCCTCTTCTGGCTTGCAAGAGACCTTGTACGTGGAGCTCATACATGCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034512.7 |
||
| CDS-3UTR CCA 90 bp | CGTACAAGGTCTCTTGCAAGCCAGAAGAGGGCATCAGATTTACCATGTGGGTCTGGCCGATCACGACTGTaGCAATACTTGAGCATGCAT | + |
|
Preference number: 4 (lower is better) Translates to: RTRSLASQKRASDLPCGSGRSRL*QYLSMH Trigger: ATGCATGCTCAAGTATTGCCACAGTCGTGATCGGCC...AGACCCACATGGTAAATCTGATGCCCTCTTCTGGCTTGCAAGAGACCTTGTACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034512.7 |
||
| CDS-3UTR CCA 90 bp | ATAACTTACTTGTGTTTCCACTGGTGTTTTGCTTGCATGTATGAGCTCCACGTACCTGGCGGGTGTAGATaGCATCTGTGGCCTCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: ITYLCFHWCFACMYELHVPGGCR*HLWPQH Trigger: GTGCTGAGGCCACAGATGCCATCTACACCCGCCAGG...TACGTGGAGCTCATACATGCAAGCAAAACACCAGTGGAAACACAAGTAAGTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034512.7 |
||
| 3UTR CAA 72 bp | TTTGCTTGCATGTATGAGCTCCACGTACAAGGTCTCTaGCAAGCCAGAAGAGGGCATCAGATTTACCATGTG | + |
|
Preference number: 4 (lower is better) Translates to: FACMYELHVQGL*QARRGHQIYHV Trigger: CACATGGTAAATCTGATGCCCTCTTCTGGCTTGCAAGAGACCTTGTACGTGGAGCTCATACATGCAAGCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034512.7 |
||
| CDS-3UTR CCA 90 bp | AATTTTATTATATGTGTTAGAGCACTTGGAGGCCATAAAAGGTGGCCGATCTCCCCTGTTCTAATGCCTTaGGCAGAGCCTCGAAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: NFIICVRALGGHKRWPISPVLMP*AEPRKQ Trigger: CTGTTTTCGAGGCTCTGCCCAAGGCATTAGAACAGG...GGAGATCGGCCACCTTTTATGGCCTCCAAGTGCTCTAACACATATAATAAAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000034512.7 |
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| CDS GCA 90 bp | TGTCGGGCAGTCTCACTCGGACCCGCAGCTCGGCCGGAGCGCCGCTaGCCGCGCCCACGCCGTGCAGCGCCCCAAGCAGCAGCGGCGACA | + |
|
Preference number: 5 (lower is better) Translates to: CRAVSLGPAARPERR*PRPRRAAPQAAAAT Trigger: TGTCGCCGCTGCTGCTTGGGGCGCTGCACGGCGTGGGCGCGGGCAGCGGCGCTCCGGCCGAGCTGCGGGTCCGAGTGAGACTGCCCGACA 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034512.7 |
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| CDS CCA 90 bp | ATGCTGTCCGCGTCGCTGTCCGCCTGTAGACTCTCCTCGATCACCTaGCTGTCGGGCAGTCTCACTCGGACCCGCAGCTCGGCCGGAGCG | + |
|
Preference number: 5 (lower is better) Translates to: MLSASLSACRLSSIT*LSGSLTRTRSSAGA Trigger: CGCTCCGGCCGAGCTGCGGGTCCGAGTGAGACTGCCCGACAGCCAGGTGATCGAGGAGAGTCTACAGGCGGACAGCGACGCGGACAGCAT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034512.7 |
||
| CDS CCA 90 bp | CTGTCCAGAACTGGACATCCTCCTGGCGGGTGTAGATGGCATCTGTaGCCTCAGCACATACGTTGTGGAGATGGGGACTCAGCAGGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: LSRTGHPPGGCRWHL*PQHIRCGDGDSAGP Trigger: GGGGCCTGCTGAGTCCCCATCTCCACAACGTATGTGCTGAGGCCACAGATGCCATCTACACCCGCCAGGAGGATGTCCAGTTCTGGACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034512.7 |
||
| CDS CCA 90 bp | CACCTCGCTCTGTCCAGAACTGGACATCCTCCTGGCGGGTGTAGATaGCATCTGTGGCCTCAGCACATACGTTGTGGAGATGGGGACTCA | + |
|
Preference number: 5 (lower is better) Translates to: HLALSRTGHPPGGCR*HLWPQHIRCGDGDS Trigger: TGAGTCCCCATCTCCACAACGTATGTGCTGAGGCCACAGATGCCATCTACACCCGCCAGGAGGATGTCCAGTTCTGGACAGAGCGAGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034512.7 |
||
| CDS CCA 90 bp | GTAGGGCGCTGGCCGATCACGACTGTGGCAATACTTGAGCATGCATaGGTACCAGGCCAGGCTCAGACTGTAGTGGCAAGTACAGGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: VGRWPITTVAILEHA*VPGQAQTVVASTGL Trigger: AAGCCCTGTACTTGCCACTACAGTCTGAGCCTGGCCTGGTACCCATGCATGCTCAAGTATTGCCACAGTCGTGATCGGCCAGCGCCCTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034512.7 ENSMUST00000213286.2 |
||
| CDS-3UTR CAA 90 bp | CCCAGGGTAGAGAGAAGGCACTGTAACCAGACACAGGAGCTGGGGCACGAGTCCCTGGGGATGATGTCATaGTGGTGCAGCCTTGTGACA | + |
|
Preference number: 5 (lower is better) Translates to: PRVERRHCNQTQELGHESLGMMS*WCSLVT Trigger: TGTCACAAGGCTGCACCACAATGACATCATCCCCAG...GGACTCGTGCCCCAGCTCCTGTGTCTGGTTACAGTGCCTTCTCTCTACCCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034512.7 |
||
| CDS-3UTR CAA 90 bp | GACCTGATTGGGTTGCCACGCTCTCTGGTGGTCAGCGAAGAATTTGCAGGCCCAGCCTCAGCACATACGTaGTGGAGATGGGGACTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: DLIGLPRSLVVSEEFAGPASAHT*WRWGLS Trigger: GCTGAGTCCCCATCTCCACAACGTATGTGCTGAGGC...TGGGCCTGCAAATTCTTCGCTGACCACCAGAGAGCGTGGCAACCCAATCAGGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034512.7 |
||
| CDS TCA 90 bp | ATGTCATTGTGGTGCAGCCTTGTGACAAAGCAAAGTGCCTGGAACTaGCTCTGCCCCTTCTCCAGCTCCCCGAGGATCAGGGCTCGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: MSLWCSLVTKQSAWN*LCPFSSSPRIRARK Trigger: CTTCCGAGCCCTGATCCTCGGGGAGCTGGAGAAGGGGCAGAGTCAGTTCCAGGCACTTTGCTTTGTCACAAGGCTGCACCACAATGACAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034512.7 |
||
| CDS CCA 90 bp | CCCCAACTCGTCCACAACGAGGTAATTCCGCCTGTTCTAATGCCTTaGGCAGAGCCTCGAAAACAGAACTGTCCACACCAAGGGCCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: PQLVHNEVIPPVLMP*AEPRKQNCPHQGPS Trigger: GGACGGCCCTTGGTGTGGACAGTTCTGTTTTCGAGGCTCTGCCCAAGGCATTAGAACAGGCGGAATTACCTCGTTGTGGACGAGTTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213286.2 |
||
| CDS CCA 90 bp | CCCCAACTCGTCCACAACGAGGTAATTCCGCCTGTTCTAATGCCTTaGGCAGAGCCTCGAAAACAGAACTGTCCACACCTCGCTCTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: PQLVHNEVIPPVLMP*AEPRKQNCPHLALS Trigger: GGACAGAGCGAGGTGTGGACAGTTCTGTTTTCGAGGCTCTGCCCAAGGCATTAGAACAGGCGGAATTACCTCGTTGTGGACGAGTTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034512.7 |
||
| CDS CCA 90 bp | GGTGTAGCTTTTCCTGCAGCTTCGGATGCCACACTTGTAGGGCGCTaGCCGATCACGACTGTGGCAATACTTGAGCATGCATGGGTACCA | + |
|
Preference number: 5 (lower is better) Translates to: GVAFPAASDATLVGR*PITTVAILEHAWVP Trigger: TGGTACCCATGCATGCTCAAGTATTGCCACAGTCGTGATCGGCCAGCGCCCTACAAGTGTGGCATCCGAAGCTGCAGGAAAAGCTACACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034512.7 ENSMUST00000213286.2 |
||
| CDS-3UTR CAA 90 bp | CTTGCATGTATGAGCTCCACGTACAAGGTCTCTTGCAAGCCAGAAGAGGGCATCAGAGTGCCGTCGGGTTaGCGCAGATCAAGGCTGATG | + |
|
Preference number: 5 (lower is better) Translates to: LACMSSTYKVSCKPEEGIRVPSG*RRSRLM Trigger: CATCAGCCTTGATCTGCGCAAACCCGACGGCACTCT...GATGCCCTCTTCTGGCTTGCAAGAGACCTTGTACGTGGAGCTCATACATGCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034512.7 |
||
| CDS-3UTR CAA 90 bp | CTGATTGGGTTGCCACGCTCTCTGGTGGTCAGCGAAGAATTTGCAGGCCCAAGTGCCTGTTCTAATGCCTaGGGCAGAGCCTCGAAAACA | + |
|
Preference number: 5 (lower is better) Translates to: LIGLPRSLVVSEEFAGPSACSNA*GRASKT Trigger: TGTTTTCGAGGCTCTGCCCAAGGCATTAGAACAGGC...ACTTGGGCCTGCAAATTCTTCGCTGACCACCAGAGAGCGTGGCAACCCAATCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034512.7 ENSMUST00000213286.2 |
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| CDS GCA 90 bp | GAGGTACATAGAAGTCAAAGGTGTAGCTTTTCCTGCAGCTTCGGATaGCACACTTGTAGGGCGCTGGCCGATCACGACTGTGGCAATACT | + |
|
Preference number: 5 (lower is better) Translates to: EVHRSQRCSFSCSFG*HTCRALADHDCGNT Trigger: AGTATTGCCACAGTCGTGATCGGCCAGCGCCCTACAAGTGTGGCATCCGAAGCTGCAGGAAAAGCTACACCTTTGACTTCTATGTACCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034512.7 ENSMUST00000213286.2 |
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| CDS GCA 90 bp | ACAGTTGCTTCTGAGGTACATAGAAGTCAAAGGTGTAGCTTTTCCTaGAGCTTCGGATGCCACACTTGTAGGGCGCTGGCCGATCACGAC | + |
|
Preference number: 5 (lower is better) Translates to: TVASEVHRSQRCSFS*SFGCHTCRALADHD Trigger: GTCGTGATCGGCCAGCGCCCTACAAGTGTGGCATCCGAAGCTGCAGGAAAAGCTACACCTTTGACTTCTATGTACCTCAGAAGCAACTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034512.7 ENSMUST00000213286.2 |
||
| CDS-3UTR CAA 90 bp | CTGATTGGGTTGCCACGCTCTCTGGTGGTCAGCGAAGAATTTGCAGGCCCAAGTATCCCAGAGGCACAGTaGCTTCTGAGGTACATAGAA | + |
|
Preference number: 5 (lower is better) Translates to: LIGLPRSLVVSEEFAGPSIPEAQ*LLRYIE Trigger: TTCTATGTACCTCAGAAGCAACTGTGCCTCTGGGAT...ACTTGGGCCTGCAAATTCTTCGCTGACCACCAGAGAGCGTGGCAACCCAATCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034512.7 ENSMUST00000213286.2 |
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| CDS-3UTR CAA 90 bp | ATAACTTACTTGTGTTTCCACTGGTGTTTTGCTTGCATGTATGAGCTCCACGTATTTTTCTGCCGGAGCTaGGCCATGGCCTCACTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: ITYLCFHWCFACMYELHVFFCRS*AMASLG Trigger: CCCCAGTGAGGCCATGGCCAAGCTCCGGCAGAAAAA...TACGTGGAGCTCATACATGCAAGCAAAACACCAGTGGAAACACAAGTAAGTTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034512.7 |
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| CDS-3UTR CAA 90 bp | CGTACAAGGTCTCTTGCAAGCCAGAAGAGGGCATCAGATTTACCATGTGGGTCTATCCCAGAGGCACAGTaGCTTCTGAGGTACATAGAA | + |
|
Preference number: 5 (lower is better) Translates to: RTRSLASQKRASDLPCGSIPEAQ*LLRYIE Trigger: TTCTATGTACCTCAGAAGCAACTGTGCCTCTGGGAT...AGACCCACATGGTAAATCTGATGCCCTCTTCTGGCTTGCAAGAGACCTTGTACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034512.7 |
||
| CDS GCA 72 bp | AGCTCGGCCGGAGCGCCGCTGCCCGCGCCCACGCCGTaGAGCGCCCCAAGCAGCAGCGGCGACAGCAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SSAGAPLPAPTP*SAPSSSGDSSS Trigger: GCTGCTGCTGTCGCCGCTGCTGCTTGGGGCGCTGCACGGCGTGGGCGCGGGCAGCGGCGCTCCGGCCGAGCT 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034512.7 |
||
| CDS CCA 72 bp | GCGTCGCTGTCCGCCTGTAGACTCTCCTCGATCACCTaGCTGTCGGGCAGTCTCACTCGGACCCGCAGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: ASLSACRLSSIT*LSGSLTRTRSS Trigger: CGAGCTGCGGGTCCGAGTGAGACTGCCCGACAGCCAGGTGATCGAGGAGAGTCTACAGGCGGACAGCGACGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034512.7 |
||
| CDS CAA 90 bp | TCCTTCTTGAAATCCGCGATGAAGGAGATGAGAGTGCCGTCGGGTTaGCGCAGATCAAGGCTGATGCTGTCCGCGTCGCTGTCCGCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: SFLKSAMKEMRVPSG*RRSRLMLSASLSAC Trigger: ACAGGCGGACAGCGACGCGGACAGCATCAGCCTTGATCTGCGCAAACCCGACGGCACTCTCATCTCCTTCATCGCGGATTTCAAGAAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034512.7 |
||
| CDS CAA 72 bp | AAATCCGCGATGAAGGAGATGAGAGTGCCGTCGGGTTaGCGCAGATCAAGGCTGATGCTGTCCGCGTCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: KSAMKEMRVPSG*RRSRLMLSASL Trigger: CAGCGACGCGGACAGCATCAGCCTTGATCTGCGCAAACCCGACGGCACTCTCATCTCCTTCATCGCGGATTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034512.7 |
||
| CDS CCA 72 bp | ACTGGACATCCTCCTGGCGGGTGTAGATGGCATCTGTaGCCTCAGCACATACGTTGTGGAGATGGGGACTCA | + |
|
Preference number: 6 (lower is better) Translates to: TGHPPGGCRWHL*PQHIRCGDGDS Trigger: TGAGTCCCCATCTCCACAACGTATGTGCTGAGGCCACAGATGCCATCTACACCCGCCAGGAGGATGTCCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034512.7 |
||
| CDS CAA 90 bp | TCCCCAACTCGTCCACAACGAGGTAATTCCGCCTGTTCTAATGCCTaGGGCAGAGCCTCGAAAACAGAACTGTCCACACCAAGGGCCGTC | + |
|
Preference number: 6 (lower is better) Translates to: SPTRPQRGNSACSNA*GRASKTELSTPRAV Trigger: GACGGCCCTTGGTGTGGACAGTTCTGTTTTCGAGGCTCTGCCCAAGGCATTAGAACAGGCGGAATTACCTCGTTGTGGACGAGTTGGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213286.2 |
||
| CDS GCA 72 bp | GATGTCATTGTGGTGCAGCCTTGTGACAAAGCAAAGTaGCTGGAACTGACTCTGCCCCTTCTCCAGCTCCCC | + |
|
Preference number: 6 (lower is better) Translates to: DVIVVQPCDKAK*LELTLPLLQLP Trigger: GGGGAGCTGGAGAAGGGGCAGAGTCAGTTCCAGGCACTTTGCTTTGTCACAAGGCTGCACCACAATGACATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034512.7 |
||
| CDS CCA 72 bp | CTGTCCAGAACTGGACATCCTCCTGGCGGGTGTAGATaGCATCTGTGGCCTCAGCACATACGTTGTGGAGAT | + |
|
Preference number: 6 (lower is better) Translates to: LSRTGHPPGGCR*HLWPQHIRCGD Trigger: ATCTCCACAACGTATGTGCTGAGGCCACAGATGCCATCTACACCCGCCAGGAGGATGTCCAGTTCTGGACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034512.7 ENSMUST00000213286.2 |
||
| CDS CCA 72 bp | TGGCCGATCACGACTGTGGCAATACTTGAGCATGCATaGGTACCAGGCCAGGCTCAGACTGTAGTGGCAAGT | + |
|
Preference number: 6 (lower is better) Translates to: WPITTVAILEHA*VPGQAQTVVAS Trigger: ACTTGCCACTACAGTCTGAGCCTGGCCTGGTACCCATGCATGCTCAAGTATTGCCACAGTCGTGATCGGCCA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034512.7 ENSMUST00000213286.2 |
||
| CDS CCA 72 bp | TTTCCTGCAGCTTCGGATGCCACACTTGTAGGGCGCTaGCCGATCACGACTGTGGCAATACTTGAGCATGCA | + |
|
Preference number: 6 (lower is better) Translates to: FPAASDATLVGR*PITTVAILEHA Trigger: TGCATGCTCAAGTATTGCCACAGTCGTGATCGGCCAGCGCCCTACAAGTGTGGCATCCGAAGCTGCAGGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034512.7 ENSMUST00000213286.2 |
||
| CDS CAA 90 bp | TCCCCAACTCGTCCACAACGAGGTAATTCCGCCTGTTCTAATGCCTaGGGCAGAGCCTCGAAAACAGAACTGTCCACACCTCGCTCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: SPTRPQRGNSACSNA*GRASKTELSTPRSV Trigger: GACAGAGCGAGGTGTGGACAGTTCTGTTTTCGAGGCTCTGCCCAAGGCATTAGAACAGGCGGAATTACCTCGTTGTGGACGAGTTGGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034512.7 |
||
| CDS GCA 72 bp | TCTGAGGTACATAGAAGTCAAAGGTGTAGCTTTTCCTaGAGCTTCGGATGCCACACTTGTAGGGCGCTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: SEVHRSQRCSFS*SFGCHTCRALA Trigger: GGCCAGCGCCCTACAAGTGTGGCATCCGAAGCTGCAGGAAAAGCTACACCTTTGACTTCTATGTACCTCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034512.7 ENSMUST00000213286.2 |
||
| CDS CCA 72 bp | GTCCACAACGAGGTAATTCCGCCTGTTCTAATGCCTTaGGCAGAGCCTCGAAAACAGAACTGTCCACACCTC | + |
|
Preference number: 6 (lower is better) Translates to: VHNEVIPPVLMP*AEPRKQNCPHL Trigger: GAGGTGTGGACAGTTCTGTTTTCGAGGCTCTGCCCAAGGCATTAGAACAGGCGGAATTACCTCGTTGTGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034512.7 |
||
| CDS CAA 72 bp | CGTCCACAACGAGGTAATTCCGCCTGTTCTAATGCCTaGGGCAGAGCCTCGAAAACAGAACTGTCCACACCT | + |
|
Preference number: 6 (lower is better) Translates to: RPQRGNSACSNA*GRASKTELSTP Trigger: AGGTGTGGACAGTTCTGTTTTCGAGGCTCTGCCCAAGGCATTAGAACAGGCGGAATTACCTCGTTGTGGACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034512.7 |
||
| CDS CAA 72 bp | CGTCCACAACGAGGTAATTCCGCCTGTTCTAATGCCTaGGGCAGAGCCTCGAAAACAGAACTGTCCACACCA | + |
|
Preference number: 6 (lower is better) Translates to: RPQRGNSACSNA*GRASKTELSTP Trigger: TGGTGTGGACAGTTCTGTTTTCGAGGCTCTGCCCAAGGCATTAGAACAGGCGGAATTACCTCGTTGTGGACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213286.2 |
||
| CDS CCA 72 bp | GTCCACAACGAGGTAATTCCGCCTGTTCTAATGCCTTaGGCAGAGCCTCGAAAACAGAACTGTCCACACCAA | + |
|
Preference number: 6 (lower is better) Translates to: VHNEVIPPVLMP*AEPRKQNCPHQ Trigger: TTGGTGTGGACAGTTCTGTTTTCGAGGCTCTGCCCAAGGCATTAGAACAGGCGGAATTACCTCGTTGTGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213286.2 |
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