Pregenerated sensors for NYX (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051228Ensembl transcript IDs: ENSMUST00000050434.6
Found 116 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CATGACCACGAGAAAAGCTGGTGTGTCAGGGGCCCTGAGTGGGACTaGGCATCACACACTCCACACTCAGAACTCCATGAACGTTCACAT | + |
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Preference number: 1 (lower is better) Translates to: HDHEKSWCVRGPEWD*ASHTPHSELHERSH Trigger: ATGTGAACGTTCATGGAGTTCTGAGTGTGGAGTGTGTGATGCCCAGTCCCACTCAGGGCCCCTGACACACCAGCTTTTCTCGTGGTCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
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| 3UTR TCA 90 bp | CCATTTTCTCCCAGGATTGCGGTCCCCCTTGCACCCACGAATAACTaGGTCCCACGGGACGGGAAATCAATGGATGCCCATGTGACAAAA | + |
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Preference number: 1 (lower is better) Translates to: PFSPRIAVPLAPTNN*VPRDGKSMDAHVTK Trigger: TTTTGTCACATGGGCATCCATTGATTTCCCGTCCCGTGGGACTCAGTTATTCGTGGGTGCAAGGGGGACCGCAATCCTGGGAGAAAATGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
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| 3UTR-3UTR TCA 90 bp | GAACCATCCCAGCTGGAGATGCTCTGCGCTGCTGACAGAGCATGTTGTGGGAACCACAATCTCCCACCCTaGCAAGCCAAATGGTCTCGT | + |
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Preference number: 2 (lower is better) Translates to: EPSQLEMLCAADRACCGNHNLPP*QAKWSR Trigger: ACGAGACCATTTGGCTTGTCAGGGTGGGAGATTGTG...GTTCCCACAACATGCTCTGTCAGCAGCGCAGAGCATCTCCAGCTGGGATGGTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
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| 3UTR-3UTR CCA 90 bp | GAACCATCCCAGCTGGAGATGCTCTGCGCTGCTGACAGAGCATGTTGTGGGAACAGAAAAGACAGGGATTaGGTTTATGGGCTACTGACA | + |
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Preference number: 2 (lower is better) Translates to: EPSQLEMLCAADRACCGNRKDRD*VYGLLT Trigger: TGTCAGTAGCCCATAAACCCAATCCCTGTCTTTTCT...GTTCCCACAACATGCTCTGTCAGCAGCGCAGAGCATCTCCAGCTGGGATGGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
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| 3UTR-3UTR CCA 90 bp | GCTGGTAGAGCTTTGTCCTTGGGAATACAGTGGGAATACCCTGGGGAATCTGAGACAGGCAGTTACTCATaGCAGTCAAGCAAACCTTCC | + |
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Preference number: 2 (lower is better) Translates to: AGRALSLGIQWEYPGESETGSYS*QSSKPS Trigger: GGAAGGTTTGCTTGACTGCCATGAGTAACTGCCTGT...CTCAGATTCCCCAGGGTATTCCCACTGTATTCCCAAGGACAAAGCTCTACCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
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| 3UTR-3UTR CCA 90 bp | TCAGCAACAACTGCCTGTCTTGGATCTAAGTCTTTTTCCCATGCCCTTTTTCTAAGAGTGCCCGCCACCTaGAGCCTGACTTCAGCCCTT | + |
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Preference number: 2 (lower is better) Translates to: SATTACLGSKSFSHALFLRVPAT*SLTSAL Trigger: AAGGGCTGAAGTCAGGCTCCAGGTGGCGGGCACTCT...TAGAAAAAGGGCATGGGAAAAAGACTTAGATCCAAGACAGGCAGTTGTTGCTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
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| 3UTR-3UTR CCA 90 bp | CAGCCCAGGAGACAACATTTAAGAGGCAACCTGCCAACAGTTACCCTCATGGCCGTAGAGCTTTGTCCTTaGGAATACAGTGGGAATACC | + |
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Preference number: 2 (lower is better) Translates to: QPRRQHLRGNLPTVTLMAVELCP*EYSGNT Trigger: GGTATTCCCACTGTATTCCCAAGGACAAAGCTCTAC...GGCCATGAGGGTAACTGTTGGCAGGTTGCCTCTTAAATGTTGTCTCCTGGGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
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| 3UTR-3UTR CCA 90 bp | TCAGCAACAACTGCCTGTCTTGGATCTAAGTCTTTTTCCCATGCCCTTTTTCTACAGGGATTGGGTTTATaGGCTACTGACAGAGAAGAG | + |
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Preference number: 2 (lower is better) Translates to: SATTACLGSKSFSHALFLQGLGL*ATDREE Trigger: CTCTTCTCTGTCAGTAGCCCATAAACCCAATCCCTG...TAGAAAAAGGGCATGGGAAAAAGACTTAGATCCAAGACAGGCAGTTGTTGCTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
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| 3UTR-3UTR TCA 90 bp | GTCATGAGTATAGAAGCCAGGGCCTCTCCCATTTTAGGCAAGCACTATAAAACTACTCACAATAGCATTTaGAAGACTCTGAAAAGGCTT | + |
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Preference number: 2 (lower is better) Translates to: VMSIEARASPILGKHYKTTHNSI*KTLKRL Trigger: AAGCCTTTTCAGAGTCTTTCAAATGCTATTGTGAGT...AGTTTTATAGTGCTTGCCTAAAATGGGAGAGGCCCTGGCTTCTATACTCATGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
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| 3UTR TCA 72 bp | CCCAGGATTGCGGTCCCCCTTGCACCCACGAATAACTaGGTCCCACGGGACGGGAAATCAATGGATGCCCAT | + |
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Preference number: 3 (lower is better) Translates to: PRIAVPLAPTNN*VPRDGKSMDAH Trigger: ATGGGCATCCATTGATTTCCCGTCCCGTGGGACTCAGTTATTCGTGGGTGCAAGGGGGACCGCAATCCTGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
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| 3UTR CCA 72 bp | CAAATTCCAGAGTTAAGACGCAGAGTGCCCGCCACCTaGAGCCTGACTTCAGCCCTTGTGTCCCCTGATGCC | + |
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Preference number: 3 (lower is better) Translates to: QIPELRRRVPAT*SLTSALVSPDA Trigger: GGCATCAGGGGACACAAGGGCTGAAGTCAGGCTCCAGGTGGCGGGCACTCTGCGTCTTAACTCTGGAATTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
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| 3UTR GCA 72 bp | CCATCCCTGATAGAACCATCCCAGCTGGAGATGCTCTaGGCTGCTGACAGAGCATGTTGTGGGAACAGACAC | + |
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Preference number: 3 (lower is better) Translates to: PSLIEPSQLEML*AADRACCGNRH Trigger: GTGTCTGTTCCCACAACATGCTCTGTCAGCAGCGCAGAGCATCTCCAGCTGGGATGGTTCTATCAGGGATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
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| 3UTR CCA 72 bp | GAGAAAAGCTGGTGTGTCAGGGGCCCTGAGTGGGACTaGGCATCACACACTCCACACTCAGAACTCCATGAA | + |
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Preference number: 3 (lower is better) Translates to: EKSWCVRGPEWD*ASHTPHSELHE Trigger: TTCATGGAGTTCTGAGTGTGGAGTGTGTGATGCCCAGTCCCACTCAGGGCCCCTGACACACCAGCTTTTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
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| 3UTR TCA 72 bp | GATAGAACCATCCCAGCTGGAGATGCTCTGCGCTGCTaGCAGAGCATGTTGTGGGAACAGACACTCTTCCCA | + |
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Preference number: 3 (lower is better) Translates to: DRTIPAGDALRC*QSMLWEQTLFP Trigger: TGGGAAGAGTGTCTGTTCCCACAACATGCTCTGTCAGCAGCGCAGAGCATCTCCAGCTGGGATGGTTCTATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
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| 3UTR CCA 72 bp | ATGGATGCTGGTAGAGCTTTGTCCTTGGGAATACAGTaGGAATACCCTGGGGAATCTGAGTCCCCTTCACAC | + |
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Preference number: 3 (lower is better) Translates to: MDAGRALSLGIQ*EYPGESESPSH Trigger: GTGTGAAGGGGACTCAGATTCCCCAGGGTATTCCCACTGTATTCCCAAGGACAAAGCTCTACCAGCATCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
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| 3UTR-3UTR CAA 90 bp | GTCATGAGTATAGAAGCCAGGGCCTCTCCCATTTTAGGCAAGCACTATAAAACTCATTTTCTCCCAGGATaGCGGTCCCCCTTGCACCCA | + |
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Preference number: 3 (lower is better) Translates to: VMSIEARASPILGKHYKTHFLPG*RSPLHP Trigger: TGGGTGCAAGGGGGACCGCAATCCTGGGAGAAAATG...AGTTTTATAGTGCTTGCCTAAAATGGGAGAGGCCCTGGCTTCTATACTCATGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
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| 3UTR TCA 72 bp | GACTTCCAAGGACATGAGTTACGTGCTGAGCCCGCCTaGCACCCAAAGTTGTTAAGGAGGATCCAAATTCCA | + |
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Preference number: 3 (lower is better) Translates to: DFQGHELRAEPA*HPKLLRRIQIP Trigger: TGGAATTTGGATCCTCCTTAACAACTTTGGGTGTCAGGCGGGCTCAGCACGTAACTCATGTCCTTGGAAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
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| 3UTR GCA 72 bp | TTGATACCCACTCCAGTGGCATTCCCCAGAGCTCTCTaGCTAGAGCCATCTTTGGTGACAAACTGTTTCTTC | + |
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Preference number: 3 (lower is better) Translates to: LIPTPVAFPRAL*LEPSLVTNCFF Trigger: GAAGAAACAGTTTGTCACCAAAGATGGCTCTAGGCAGAGAGCTCTGGGGAATGCCACTGGAGTGGGTATCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
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| 3UTR-3UTR CAA 90 bp | GCTGGTAGAGCTTTGTCCTTGGGAATACAGTGGGAATACCCTGGGGAATCTGAGCAACAACTGCCTGTCTaGGATCTAAGTCTTTTTCCC | + |
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Preference number: 3 (lower is better) Translates to: AGRALSLGIQWEYPGESEQQLPV*DLSLFP Trigger: GGGAAAAAGACTTAGATCCAAGACAGGCAGTTGTTG...CTCAGATTCCCCAGGGTATTCCCACTGTATTCCCAAGGACAAAGCTCTACCAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
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| 3UTR TCA 72 bp | CCTGGGGAATCTGAGTCCCCTTCACACACAGGTCTTTaGTTTCTACTCTCCTGGCTGTTAGTCTCCATTCAA | + |
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Preference number: 3 (lower is better) Translates to: PGESESPSHTGL*FLLSWLLVSIQ Trigger: TTGAATGGAGACTAACAGCCAGGAGAGTAGAAATCAAAGACCTGTGTGTGAAGGGGACTCAGATTCCCCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
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| 3UTR-3UTR CAA 90 bp | GTCATGAGTATAGAAGCCAGGGCCTCTCCCATTTTAGGCAAGCACTATAAAACTGATAGCACCCTCTACTaGGTCTCCAGCTCCTTTTTC | + |
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Preference number: 3 (lower is better) Translates to: VMSIEARASPILGKHYKTDSTLY*VSSSFF Trigger: GAAAAAGGAGCTGGAGACCAAGTAGAGGGTGCTATC...AGTTTTATAGTGCTTGCCTAAAATGGGAGAGGCCCTGGCTTCTATACTCATGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
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| 3UTR-3UTR CAA 90 bp | ACGTTCACATGGATGCTGGTAGAGCTTTGTCCTTGGGAATACAGTGGGAATACCCTGATGCCCACTTCTTaGTTCTTTGTTAATTCCCCC | + |
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Preference number: 3 (lower is better) Translates to: TFTWMLVELCPWEYSGNTLMPTS*FFVNSP Trigger: GGGGGAATTAACAAAGAACAAAGAAGTGGGCATCAG...GGTATTCCCACTGTATTCCCAAGGACAAAGCTCTACCAGCATCCATGTGAACGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
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| 3UTR-3UTR CAA 90 bp | TCTCCATTCAAGCAGCTCACAATAACTTCCATCCCTGATAGAACCATCCCAGCTTGCCTAGAGCCATCTTaGGTGACAAACTGTTTCTTC | + |
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Preference number: 3 (lower is better) Translates to: SPFKQLTITSIPDRTIPACLEPS*VTNCFF Trigger: GAAGAAACAGTTTGTCACCAAAGATGGCTCTAGGCA...AGCTGGGATGGTTCTATCAGGGATGGAAGTTATTGTGAGCTGCTTGAATGGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
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| 3UTR TCA 72 bp | ATTCTTCTCTTTTTCAATGTGTTAGAGACCATACCATaGGAAAGCGAGCTTTTCACAATCTCCCACCCTGAC | + |
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Preference number: 3 (lower is better) Translates to: ILLFFNVLETIP*ESELFTISHPD Trigger: GTCAGGGTGGGAGATTGTGAAAAGCTCGCTTTCTCATGGTATGGTCTCTAACACATTGAAAAAGAGAAGAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
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| CDS-3UTR GCA 90 bp | CCATCCCAGCTGGAGATGCTCTGCGCTGCTGACAGAGCATGTTGTGGGAACAGAAGGCGCGTGCCACGCTaGCCAGCGCGTTGCCGCCCA | + |
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Preference number: 4 (lower is better) Translates to: PSQLEMLCAADRACCGNRRRVPR*PARCRP Trigger: TGGGCGGCAACGCGCTGGGCAGCGTGGCACGCGCCT...TCTGTTCCCACAACATGCTCTGTCAGCAGCGCAGAGCATCTCCAGCTGGGATGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
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| CDS-3UTR TCA 90 bp | GAACCATCCCAGCTGGAGATGCTCTGCGCTGCTGACAGAGCATGTTGTGGGAACCGTTGCCGCCCAGGTTaGGGGTGCGCAGGCGGCGAA | + |
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Preference number: 4 (lower is better) Translates to: EPSQLEMLCAADRACCGNRCRPG*GCAGGE Trigger: TTCGCCGCCTGCGCACCCTCAACCTGGGCGGCAACG...GTTCCCACAACATGCTCTGTCAGCAGCGCAGAGCATCTCCAGCTGGGATGGTTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
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| CDS-3UTR GCA 90 bp | CCGTTAGGAACCTGCAACTTCTGCAATCAGCTCAGGCTGGTTCTGCTGCCAACACCACGTGGCTGCAGGTaGAGGCCGCAGGGCAGGCCC | + |
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Preference number: 4 (lower is better) Translates to: PLGTCNFCNQLRLVLLPTPRGCR*RPQGRP Trigger: GGGCCTGCCCTGCGGCCTGCACCTGCAGCCACGTGG...TGTTGGCAGCAGAACCAGCCTGAGCTGATTGCAGAAGTTGCAGGTTCCTAACGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
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| CDS-3UTR CCA 90 bp | AAATGGTCTCGTGCTAGGAGCCGGTCGTCACTCCCTTCTCCCTGTTCCCTTCCTACCTGGCTGAGGTCCTaGCCGGCCACAGAGCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: KWSRARSRSSLPSPCSLPTWLRS*PATEPG Trigger: CCCAGGCTCTGTGGCCGGCCAGGACCTCAGCCAGGT...AGGAAGGGAACAGGGAGAAGGGAGTGACGACCGGCTCCTAGCACGAGACCATTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
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| CDS-3UTR TCA 90 bp | AAATGGTCTCGTGCTAGGAGCCGGTCGTCACTCCCTTCTCCCTGTTCCCTTCCTCGGCTGCGCTCGAAATaGGCGTGCGTCAGGTTGGCG | + |
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Preference number: 4 (lower is better) Translates to: KWSRARSRSSLPSPCSLPRLRSK*ACVRLA Trigger: CGCCAACCTGACGCACGCTCATTTCGAGCGCAGCCG...AGGAAGGGAACAGGGAGAAGGGAGTGACGACCGGCTCCTAGCACGAGACCATTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
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| CDS-3UTR TCA 90 bp | CCATCCCAGCTGGAGATGCTCTGCGCTGCTGACAGAGCATGTTGTGGGAACAGACAAAGACCACCTGGCTaGGGTCCTGGCCGGCCACAG | + |
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Preference number: 4 (lower is better) Translates to: PSQLEMLCAADRACCGNRQRPPG*GPGRPQ Trigger: CTGTGGCCGGCCAGGACCTCAGCCAGGTGGTCTTTG...TCTGTTCCCACAACATGCTCTGTCAGCAGCGCAGAGCATCTCCAGCTGGGATGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
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| CDS-3UTR CCA 90 bp | AAATGGTCTCGTGCTAGGAGCCGGTCGTCACTCCCTTCTCCCTGTTCCCTTCCTCGCTCAAAGACCACCTaGCTGAGGTCCTGGCCGGCC | + |
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Preference number: 4 (lower is better) Translates to: KWSRARSRSSLPSPCSLPRSKTT*LRSWPA Trigger: GGCCGGCCAGGACCTCAGCCAGGTGGTCTTTGAGCG...AGGAAGGGAACAGGGAGAAGGGAGTGACGACCGGCTCCTAGCACGAGACCATTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
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| CDS-3UTR TCA 90 bp | GCTGGTAGAGCTTTGTCCTTGGGAATACAGTGGGAATACCCTGGGGAATCTGAGGGTTGGCCTGCAGGCTaGGCGAGCGCAGACGCCGCA | + |
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Preference number: 4 (lower is better) Translates to: AGRALSLGIQWEYPGESEGWPAG*ASADAA Trigger: TGCGGCGTCTGCGCTCGCTCAGCCTGCAGGCCAACC...CTCAGATTCCCCAGGGTATTCCCACTGTATTCCCAAGGACAAAGCTCTACCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
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| CDS-3UTR GCA 90 bp | GCTGGTAGAGCTTTGTCCTTGGGAATACAGTGGGAATACCCTGGGGAATCTGAGCGCAGCTCACCGTTGTaGGCCAGGCGCAGCTCGGCC | + |
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Preference number: 4 (lower is better) Translates to: AGRALSLGIQWEYPGESERSSPL*ARRSSA Trigger: GGCCGAGCTGCGCCTGGCGCACAACGGTGAGCTGCG...CTCAGATTCCCCAGGGTATTCCCACTGTATTCCCAAGGACAAAGCTCTACCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
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| CDS-3UTR CCA 90 bp | AAATGGTCTCGTGCTAGGAGCCGGTCGTCACTCCCTTCTCCCTGTTCCCTTCCTTCCGGTCCAGATCGATaGAGGCCGCCTCGCACGGAA | + |
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Preference number: 4 (lower is better) Translates to: KWSRARSRSSLPSPCSLPSGPDR*RPPRTE Trigger: TTCCGTGCGAGGCGGCCTCCATCGATCTGGACCGGA...AGGAAGGGAACAGGGAGAAGGGAGTGACGACCGGCTCCTAGCACGAGACCATTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
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| CDS-3UTR TCA 90 bp | CTCCAGTTACTACAGGCAGTTACTCATGGCAGTCAAGCAAACCTTCCCCCTTTTGACGCTCGGGGACGCTaGAGAGGCGGCAGGCCGCCA | + |
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Preference number: 4 (lower is better) Translates to: LQLLQAVTHGSQANLPPFDARGR*RGGRPP Trigger: TGGCGGCCTGCCGCCTCTTCAGCGTCCCCGAGCGTC...AAAAGGGGGAAGGTTTGCTTGACTGCCATGAGTAACTGCCTGTAGTAACTGGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
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| CDS-3UTR GCA 90 bp | ACTCATGGCAGTCAAGCAAACCTTCCCCCTTTTGGCCAAAGTGGTTTGGGTCACCGCACGCGGTTGGCCTaGAGGCTGAGCGAGCGCAGA | + |
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Preference number: 4 (lower is better) Translates to: THGSQANLPPFGQSGLGHRTRLA*RLSERR Trigger: TCTGCGCTCGCTCAGCCTGCAGGCCAACCGCGTGCG...GTGACCCAAACCACTTTGGCCAAAAGGGGGAAGGTTTGCTTGACTGCCATGAGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
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| CDS-3UTR CCA 90 bp | CCGTTAGGAACCTGCAACTTCTGCAATCAGCTCAGGCTGGTTCTGCTGCCAACACAGCCACGTTCCACGTaGCTGCAGGTGCAGGCCGCA | + |
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Preference number: 4 (lower is better) Translates to: PLGTCNFCNQLRLVLLPTQPRST*LQVQAA Trigger: TGCGGCCTGCACCTGCAGCCACGTGGAACGTGGCTG...TGTTGGCAGCAGAACCAGCCTGAGCTGATTGCAGAAGTTGCAGGTTCCTAACGG 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
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| CDS-3UTR CCA 90 bp | GAACCATCCCAGCTGGAGATGCTCTGCGCTGCTGACAGAGCATGTTGTGGGAACGCCCAGGAAGAAACCTaGCTGGAAAGCGGCCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: EPSQLEMLCAADRACCGNAQEET*LESGPG Trigger: TCCTGGGCCGCTTTCCAGCCAGGTTTCTTCCTGGGC...GTTCCCACAACATGCTCTGTCAGCAGCGCAGAGCATCTCCAGCTGGGATGGTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
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| CDS-3UTR CCA 90 bp | CAGCCCAGGAGACAACATTTAAGAGGCAACCTGCCAACAGTTACCCTCATGGCCCTCCACAGGGGCCCTTaGGGCCAGCAGCTTGGAGAG | + |
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Preference number: 4 (lower is better) Translates to: QPRRQHLRGNLPTVTLMALHRGP*GQQLGE Trigger: CTCTCCAAGCTGCTGGCCCCAAGGGCCCCTGTGGAG...GGCCATGAGGGTAACTGTTGGCAGGTTGCCTCTTAAATGTTGTCTCCTGGGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
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| CDS-3UTR CCA 90 bp | GTTTCTTCCACCCACAGCAAGAACTTTAACTACCAATCCCATTCCTATTCCCTCGAGCGTGCGTCAGGTTaGCGAGGCCCCGGAGCGCGC | + |
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Preference number: 4 (lower is better) Translates to: VSSTHSKNFNYQSHSYSLERASG*RGPGAR Trigger: GCGCGCTCCGGGGCCTCGCCAACCTGACGCACGCTC...GAGGGAATAGGAATGGGATTGGTAGTTAAAGTTCTTGCTGTGGGTGGAAGAAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
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| CDS-3UTR TCA 90 bp | CCATCCCAGCTGGAGATGCTCTGCGCTGCTGACAGAGCATGTTGTGGGAACAGACTTCCTCAACAAAGGTaGTGCTGTTGCGGTCCAGGT | + |
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Preference number: 4 (lower is better) Translates to: PSQLEMLCAADRACCGNRLPQQR*CCCGPG Trigger: ACCTGGACCGCAACAGCATCACCTTTGTTGAGGAAG...TCTGTTCCCACAACATGCTCTGTCAGCAGCGCAGAGCATCTCCAGCTGGGATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
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| CDS-3UTR CCA 90 bp | ACTCATGGCAGTCAAGCAAACCTTCCCCCTTTTGGCCAAAGTGGTTTGGGTCACAAGGACAGGTTATTGTaGCGCAGCGACAGGCGGCGC | + |
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Preference number: 4 (lower is better) Translates to: THGSQANLPPFGQSGLGHKDRLL*RSDRRR Trigger: GCGCCGCCTGTCGCTGCGCCACAATAACCTGTCCTT...GTGACCCAAACCACTTTGGCCAAAAGGGGGAAGGTTTGCTTGACTGCCATGAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
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| CDS-3UTR CCA 90 bp | CCGTTAGGAACCTGCAACTTCTGCAATCAGCTCAGGCTGGTTCTGCTGCCAACAAGGCCCGAGAGGTTCTaGAAGGCGCCTTCCTCAACA | + |
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Preference number: 4 (lower is better) Translates to: PLGTCNFCNQLRLVLLPTRPERF*KAPSST Trigger: TGTTGAGGAAGGCGCCTTCCAGAACCTCTCGGGCCT...TGTTGGCAGCAGAACCAGCCTGAGCTGATTGCAGAAGTTGCAGGTTCCTAACGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
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| CDS-3UTR CCA 90 bp | AGGTCTTTGATTTCTACTCTCCTGGCTGTTAGTCTCCATTCAAGCAGCTCACAAGCCGGCCACAGAGCCTaGGGAGGCGCACGCCACATC | + |
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Preference number: 4 (lower is better) Translates to: RSLISTLLAVSLHSSSSQAGHRA*GGARHI Trigger: GATGTGGCGTGCGCCTCCCCAGGCTCTGTGGCCGGC...TTGTGAGCTGCTTGAATGGAGACTAACAGCCAGGAGAGTAGAAATCAAAGACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
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| CDS-3UTR CCA 90 bp | GCTGGTAGAGCTTTGTCCTTGGGAATACAGTGGGAATACCCTGGGGAATCTGAGCCCACCACCACATACTaGGCCAGGCTGAGCAAGACG | + |
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Preference number: 4 (lower is better) Translates to: AGRALSLGIQWEYPGESEPTTTY*ARLSKT Trigger: CGTCTTGCTCAGCCTGGCCCAGTATGTGGTGGTGGG...CTCAGATTCCCCAGGGTATTCCCACTGTATTCCCAAGGACAAAGCTCTACCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
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| CDS-3UTR GCA 90 bp | GTTTCTTCCACCCACAGCAAGAACTTTAACTACCAATCCCATTCCTATTCCCTCCCCGCTCGCCCAGGATaGGCAGGCCATTCCGGTCCA | + |
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Preference number: 4 (lower is better) Translates to: VSSTHSKNFNYQSHSYSLPARPG*AGHSGP Trigger: TGGACCGGAATGGCCTGCGCATCCTGGGCGAGCGGG...GAGGGAATAGGAATGGGATTGGTAGTTAAAGTTCTTGCTGTGGGTGGAAGAAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
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| CDS-3UTR GCA 90 bp | GTTTCTTCCACCCACAGCAAGAACTTTAACTACCAATCCCATTCCTATTCCCTCGCAACGACGGCAGCGTaGCAAAGGCCCGCTCGCCCA | + |
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Preference number: 4 (lower is better) Translates to: VSSTHSKNFNYQSHSYSLATTAA*QRPARP Trigger: TGGGCGAGCGGGCCTTTGGCACGCTGCCGTCGTTGC...GAGGGAATAGGAATGGGATTGGTAGTTAAAGTTCTTGCTGTGGGTGGAAGAAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
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| CDS-3UTR TCA 90 bp | GTGTGGAAGAAGTATCATGTTAGAAAAGACAGGGATTGGGTTTATGGGCTACTGGATTGTCGAAGGCCGTaGGCTCGCGCAGGGCCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VWKKYHVRKDRDWVYGLLDCRRP*ARAGPA Trigger: TGCCGGCCCTGCGCGAGCTCACGGCCTTCGACAATC...CAGTAGCCCATAAACCCAATCCCTGTCTTTTCTAACATGATACTTCTTCCACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
||
| CDS-3UTR TCA 90 bp | TCTCCATTCAAGCAGCTCACAATAACTTCCATCCCTGATAGAACCATCCCAGCTCCAGCAGGTTGTCGTTaGGCAGCAGGTCCTCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SPFKQLTITSIPDRTIPAPAGCR*AAGPPG Trigger: CCCTGGAGGACCTGCTGCTCAACGACAACCTGCTGG...AGCTGGGATGGTTCTATCAGGGATGGAAGTTATTGTGAGCTGCTTGAATGGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
||
| CDS-3UTR TCA 90 bp | CAGCCCAGGAGACAACATTTAAGAGGCAACCTGCCAACAGTTACCCTCATGGCCGCAAGACGCAAGAGGTaGAGAGAAACGTGGCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: QPRRQHLRGNLPTVTLMAARRKR*RETWPC Trigger: ACAAGGCCACGTTTCTCTTCACCTCTTGCGTCTTGC...GGCCATGAGGGTAACTGTTGGCAGGTTGCCTCTTAAATGTTGTCTCCTGGGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
||
| CDS-3UTR CCA 90 bp | TCTCCATTCAAGCAGCTCACAATAACTTCCATCCCTGATAGAACCATCCCAGCTACCTGCTCACAGTGGTaGCCACTGGCTCCGGACTCG | + |
|
Preference number: 4 (lower is better) Translates to: SPFKQLTITSIPDRTIPATCSQW*PLAPDS Trigger: CGAGTCCGGAGCCAGTGGCCACCACTGTGAGCAGGT...AGCTGGGATGGTTCTATCAGGGATGGAAGTTATTGTGAGCTGCTTGAATGGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
||
| 3UTR CAA 72 bp | CAGTTACTCATGGCAGTCAAGCAAACCTTCCCCCTTTaGGCCAAAGTGGTTTGGGTCACTTCAGTGTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QLLMAVKQTFPL*AKVVWVTSVWQ Trigger: CTGCCACACTGAAGTGACCCAAACCACTTTGGCCAAAAGGGGGAAGGTTTGCTTGACTGCCATGAGTAACTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
||
| 3UTR CAA 72 bp | GTGGCATTCCCCAGAGCTCTCTGCCTAGAGCCATCTTaGGTGACAAACTGTTTCTTCCACCCACAGCAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: VAFPRALCLEPS*VTNCFFHPQQE Trigger: TTCTTGCTGTGGGTGGAAGAAACAGTTTGTCACCAAAGATGGCTCTAGGCAGAGAGCTCTGGGGAATGCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
||
| CDS-3UTR GCA 90 bp | GTTTCTTCCACCCACAGCAAGAACTTTAACTACCAATCCCATTCCTATTCCCTCCACAGCGCCAAGGATTaGGGAAAAGGAAGAGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: VSSTHSKNFNYQSHSYSLHSAKD*GKGRGG Trigger: GCCGCCTCTTCCTTTTCCGCAATCCTTGGCGCTGTG...GAGGGAATAGGAATGGGATTGGTAGTTAAAGTTCTTGCTGTGGGTGGAAGAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
||
| CDS-3UTR CCA 90 bp | GTGTGGAAGAAGTATCATGTTAGAAAAGACAGGGATTGGGTTTATGGGCTACTGGCTCCCAGGTGGTATTaGCTACCTCCTCCACAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: VWKKYHVRKDRDWVYGLLAPRWY*LPPPQG Trigger: CCCCTGTGGAGGAGGTAGCCAATACCACCTGGGAGC...CAGTAGCCCATAAACCCAATCCCTGTCTTTTCTAACATGATACTTCTTCCACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
||
| 3UTR CAA 72 bp | ACTGCTCACAGTGTTGAGGCTTACCAAGCATCTCCTTaGCAGACACGTGGCATGTTTATTGGCCTGATCACC | + |
|
Preference number: 4 (lower is better) Translates to: TAHSVEAYQASP*QTRGMFIGLIT Trigger: GGTGATCAGGCCAATAAACATGCCACGTGTCTGCAAAGGAGATGCTTGGTAAGCCTCAACACTGTGAGCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
||
| 3UTR CAA 72 bp | AACTCCATGAACGTTCACATGGATGCTGGTAGAGCTTaGTCCTTGGGAATACAGTGGGAATACCCTGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: NSMNVHMDAGRA*SLGIQWEYPGE Trigger: TTCCCCAGGGTATTCCCACTGTATTCCCAAGGACAAAGCTCTACCAGCATCCATGTGAACGTTCATGGAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
||
| CDS TCA 90 bp | GCTCGCGCAGGGCCGGCAGCTCGGCCAGGAGACGCTCGGGGACGCTaGAGAGGCGGCAGGCCGCCAGGTCCAGGCGGCGTAGGCGGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: ARAGPAARPGDARGR*RGGRPPGPGGVGGP Trigger: TGGGCCGCCTACGCCGCCTGGACCTGGCGGCCTGCCGCCTCTTCAGCGTCCCCGAGCGTCTCCTGGCCGAGCTGCCGGCCCTGCGCGAGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
||
| CDS TCA 90 bp | CCCGGAGCGCGCCGGGCACCCGGCGGAAGAGATTGTCGAAGGCCGTaGGCTCGCGCAGGGCCGGCAGCTCGGCCAGGAGACGCTCGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: PGARRAPGGRDCRRP*ARAGPAARPGDARG Trigger: TCCCCGAGCGTCTCCTGGCCGAGCTGCCGGCCCTGCGCGAGCTCACGGCCTTCGACAATCTCTTCCGCCGGGTGCCCGGCGCGCTCCGGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
||
| CDS TCA 90 bp | AGCAGCGAGCCGGAGGCCACGGCCTCGATGCGGCTGCGCTCGAAATaGGCGTGCGTCAGGTTGGCGAGGCCCCGGAGCGCGCCGGGCACC | + |
|
Preference number: 5 (lower is better) Translates to: SSEPEATASMRLRSK*ACVRLARPRSAPGT Trigger: GGTGCCCGGCGCGCTCCGGGGCCTCGCCAACCTGACGCACGCTCATTTCGAGCGCAGCCGCATCGAGGCCGTGGCCTCCGGCTCGCTGCT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
||
| CDS TCA 90 bp | CAAAGGCCCCGGCATGCACCGCGCGCACGCGGTTGGCCTGCAGGCTaGGCGAGCGCAGACGCCGCATGCCCAGCAGCGAGCCGGAGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: QRPRHAPRARGWPAG*ASADAACPAASRRP Trigger: TGGCCTCCGGCTCGCTGCTGGGCATGCGGCGTCTGCGCTCGCTCAGCCTGCAGGCCAACCGCGTGCGCGCGGTGCATGCCGGGGCCTTTG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
||
| CDS GCA 90 bp | CAGTCGCCAAAGGCCCCGGCATGCACCGCGCGCACGCGGTTGGCCTaGAGGCTGAGCGAGCGCAGACGCCGCATGCCCAGCAGCGAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: QSPKAPACTARTRLA*RLSERRRRMPSSEP Trigger: CGGCTCGCTGCTGGGCATGCGGCGTCTGCGCTCGCTCAGCCTGCAGGCCAACCGCGTGCGCGCGGTGCATGCCGGGGCCTTTGGCGACTG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
||
| CDS GCA 90 bp | GCCGCATGCCCAGCAGCGAGCCGGAGGCCACGGCCTCGATGCGGCTaGGCTCGAAATGAGCGTGCGTCAGGTTGGCGAGGCCCCGGAGCG | + |
|
Preference number: 5 (lower is better) Translates to: AACPAASRRPRPRCG*ARNERASGWRGPGA Trigger: CGCTCCGGGGCCTCGCCAACCTGACGCACGCTCATTTCGAGCGCAGCCGCATCGAGGCCGTGGCCTCCGGCTCGCTGCTGGGCATGCGGC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
||
| CDS GCA 90 bp | CACGGTCACAGCGCACTGAGCAGCCACGTTCCACGTGGCTGCAGGTaGAGGCCGCAGGGCAGGCCCGCAGACAGGCCTCGGTGGCCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: HGHSALSSHVPRGCR*RPQGRPADRPRWPW Trigger: CCAGGGCCACCGAGGCCTGTCTGCGGGCCTGCCCTGCGGCCTGCACCTGCAGCCACGTGGAACGTGGCTGCTCAGTGCGCTGTGACCGTG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
||
| CDS GCA 90 bp | GGCGGCGCAACGACGGCAGCGTGCCAAAGGCCCGCTCGCCCAGGATaGGCAGGCCATTCCGGTCCAGATCGATGGAGGCCGCCTCGCACG | + |
|
Preference number: 5 (lower is better) Translates to: GGATTAACQRPARPG*AGHSGPDRWRPPRT Trigger: CGTGCGAGGCGGCCTCCATCGATCTGGACCGGAATGGCCTGCGCATCCTGGGCGAGCGGGCCTTTGGCACGCTGCCGTCGTTGCGCCGCC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
||
| CDS GCA 90 bp | GCAGACGCCGCATGCCCAGCAGCGAGCCGGAGGCCACGGCCTCGATaGGGCTGCGCTCGAAATGAGCGTGCGTCAGGTTGGCGAGGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: ADAACPAASRRPRPR*GCARNERASGWRGP Trigger: GGGGCCTCGCCAACCTGACGCACGCTCATTTCGAGCGCAGCCGCATCGAGGCCGTGGCCTCCGGCTCGCTGCTGGGCATGCGGCGTCTGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
||
| CDS CCA 90 bp | TGGAGGCCCGCACGGTCACAGCGCACTGAGCAGCCACGTTCCACGTaGCTGCAGGTGCAGGCCGCAGGGCAGGCCCGCAGACAGGCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: WRPARSQRTEQPRST*LQVQAAGQARRQAS Trigger: CGAGGCCTGTCTGCGGGCCTGCCCTGCGGCCTGCACCTGCAGCCACGTGGAACGTGGCTGCTCAGTGCGCTGTGACCGTGCGGGCCTCCA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
||
| CDS CCA 90 bp | AGGCCCGCTCGCCCAGGATGCGCAGGCCATTCCGGTCCAGATCGATaGAGGCCGCCTCGCACGGAAACTCCTGGGGCACCCGCTGGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: RPARPGCAGHSGPDR*RPPRTETPGAPAGG Trigger: GCCTCCAGCGGGTGCCCCAGGAGTTTCCGTGCGAGGCGGCCTCCATCGATCTGGACCGGAATGGCCTGCGCATCCTGGGCGAGCGGGCCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
||
| CDS CCA 90 bp | CCACGGCCTCGATGCGGCTGCGCTCGAAATGAGCGTGCGTCAGGTTaGCGAGGCCCCGGAGCGCGCCGGGCACCCGGCGGAAGAGATTGT | + |
|
Preference number: 5 (lower is better) Translates to: PRPRCGCARNERASG*RGPGARRAPGGRDC Trigger: ACAATCTCTTCCGCCGGGTGCCCGGCGCGCTCCGGGGCCTCGCCAACCTGACGCACGCTCATTTCGAGCGCAGCCGCATCGAGGCCGTGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
||
| CDS CCA 90 bp | AGATCGATGGAGGCCGCCTCGCACGGAAACTCCTGGGGCACCCGCTaGAGGCCCGCACGGTCACAGCGCACTGAGCAGCCACGTTCCACG | + |
|
Preference number: 5 (lower is better) Translates to: RSMEAASHGNSWGTR*RPARSQRTEQPRST Trigger: CGTGGAACGTGGCTGCTCAGTGCGCTGTGACCGTGCGGGCCTCCAGCGGGTGCCCCAGGAGTTTCCGTGCGAGGCGGCCTCCATCGATCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
||
| CDS CCA 90 bp | CCATTCCGGTCCAGATCGATGGAGGCCGCCTCGCACGGAAACTCCTaGGGCACCCGCTGGAGGCCCGCACGGTCACAGCGCACTGAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: PFRSRSMEAASHGNS*GTRWRPARSQRTEQ Trigger: CTGCTCAGTGCGCTGTGACCGTGCGGGCCTCCAGCGGGTGCCCCAGGAGTTTCCGTGCGAGGCGGCCTCCATCGATCTGGACCGGAATGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
||
| CDS GCA 90 bp | ACAGGTTATTGTGGCGCAGCGACAGGCGGCGCAACGACGGCAGCGTaGCAAAGGCCCGCTCGCCCAGGATGCGCAGGCCATTCCGGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: TGYCGAATGGATTAA*QRPARPGCAGHSGP Trigger: TGGACCGGAATGGCCTGCGCATCCTGGGCGAGCGGGCCTTTGGCACGCTGCCGTCGTTGCGCCGCCTGTCGCTGCGCCACAATAACCTGT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
||
| CDS CCA 90 bp | GGCAGGCCCTTGAAGGCGCCGGGCGTGATGAAGGACAGGTTATTGTaGCGCAGCGACAGGCGGCGCAACGACGGCAGCGTGCCAAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: GRPLKAPGVMKDRLL*RSDRRRNDGSVPKA Trigger: GGCCTTTGGCACGCTGCCGTCGTTGCGCCGCCTGTCGCTGCGCCACAATAACCTGTCCTTCATCACGCCCGGCGCCTTCAAGGGCCTGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
||
| CDS TCA 90 bp | GATGCTGTTGCGGTCCAGGTAAAGCAGCTCGAGCTCTGCCAGGTCTaGGAACCAGGCGCGTGCCACGCTGCCCAGCGCGTTGCCGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: DAVAVQVKQLELCQV*EPGACHAAQRVAAQ Trigger: CTGGGCGGCAACGCGCTGGGCAGCGTGGCACGCGCCTGGTTCTCAGACCTGGCAGAGCTCGAGCTGCTTTACCTGGACCGCAACAGCATC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
||
| CDS CCA 90 bp | CAGAGGCCATCAGAGGAGCGCTCAAAGACCACCTGGCTGAGGTCCTaGCCGGCCACAGAGCCTGGGGAGGCGCACGCCACATCAGCCACA | + |
|
Preference number: 5 (lower is better) Translates to: QRPSEERSKTTWLRS*PATEPGEAHATSAT Trigger: TGTGGCTGATGTGGCGTGCGCCTCCCCAGGCTCTGTGGCCGGCCAGGACCTCAGCCAGGTGGTCTTTGAGCGCTCCTCTGATGGCCTCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
||
| CDS-3UTR CAA 90 bp | AAATGGTCTCGTGCTAGGAGCCGGTCGTCACTCCCTTCTCCCTGTTCCCTTCCTACCGCGCGCACGCGGTaGGCCTGCAGGCTGAGCGAG | + |
|
Preference number: 5 (lower is better) Translates to: KWSRARSRSSLPSPCSLPTARTR*ACRLSE Trigger: CTCGCTCAGCCTGCAGGCCAACCGCGTGCGCGCGGT...AGGAAGGGAACAGGGAGAAGGGAGTGACGACCGGCTCCTAGCACGAGACCATTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
||
| CDS-3UTR CAA 90 bp | AAATGGTCTCGTGCTAGGAGCCGGTCGTCACTCCCTTCTCCCTGTTCCCTTCCTGCGTTGCCGCCCAGGTaGAGGGTGCGCAGGCGGCGA | + |
|
Preference number: 5 (lower is better) Translates to: KWSRARSRSSLPSPCSLPALPPR*RVRRRR Trigger: TCGCCGCCTGCGCACCCTCAACCTGGGCGGCAACGC...AGGAAGGGAACAGGGAGAAGGGAGTGACGACCGGCTCCTAGCACGAGACCATTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
||
| CDS GCA 90 bp | TGGAAAGCGGCCCAGGAGAGCACAGTGAGACGGTTGCCATTGAGATaGAGGGCCAGGAGGCCCGAGAGGTTCTGGAAGGCGCCTTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: WKAAQESTVRRLPLR*RARRPERFWKAPSS Trigger: TGAGGAAGGCGCCTTCCAGAACCTCTCGGGCCTCCTGGCCCTGCATCTCAATGGCAACCGTCTCACTGTGCTCTCCTGGGCCGCTTTCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
||
| CDS TCA 90 bp | CCAGGAGGCCCGAGAGGTTCTGGAAGGCGCCTTCCTCAACAAAGGTaGTGCTGTTGCGGTCCAGGTAAAGCAGCTCGAGCTCTGCCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: PGGPRGSGRRLPQQR*CCCGPGKAARALPG Trigger: ACCTGGCAGAGCTCGAGCTGCTTTACCTGGACCGCAACAGCATCACCTTTGTTGAGGAAGGCGCCTTCCAGAACCTCTCGGGCCTCCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
||
| CDS CCA 90 bp | AGACGGTTGCCATTGAGATGCAGGGCCAGGAGGCCCGAGAGGTTCTaGAAGGCGCCTTCCTCAACAAAGGTGATGCTGTTGCGGTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: RRLPLRCRARRPERF*KAPSSTKVMLLRSR Trigger: CCTGGACCGCAACAGCATCACCTTTGTTGAGGAAGGCGCCTTCCAGAACCTCTCGGGCCTCCTGGCCCTGCATCTCAATGGCAACCGTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
||
| CDS-3UTR CAA 90 bp | AAATGGTCTCGTGCTAGGAGCCGGTCGTCACTCCCTTCTCCCTGTTCCCTTCCTAGCGTGGCCAGCAGGTaGTCGTTGAGCAGCAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: KWSRARSRSSLPSPCSLPSVASR*SLSSRS Trigger: GGACCTGCTGCTCAACGACAACCTGCTGGCCACGCT...AGGAAGGGAACAGGGAGAAGGGAGTGACGACCGGCTCCTAGCACGAGACCATTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
||
| CDS-3UTR CAA 90 bp | AAATGGTCTCGTGCTAGGAGCCGGTCGTCACTCCCTTCTCCCTGTTCCCTTCCTACGCAGCCACTCCAGTaGGCAGTCACAGCGCCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: KWSRARSRSSLPSPCSLPTQPLQ*AVTAPR Trigger: CCTTGGCGCTGTGACTGCCAACTGGAGTGGCTGCGT...AGGAAGGGAACAGGGAGAAGGGAGTGACGACCGGCTCCTAGCACGAGACCATTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
||
| CDS-3UTR CAA 90 bp | GAACCATCCCAGCTGGAGATGCTCTGCGCTGCTGACAGAGCATGTTGTGGGAACTCACAGCGCCAAGGATaGCGGAAAAGGAAGAGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: EPSQLEMLCAADRACCGNSQRQG*RKRKRR Trigger: CCGCCTCTTCCTTTTCCGCAATCCTTGGCGCTGTGA...GTTCCCACAACATGCTCTGTCAGCAGCGCAGAGCATCTCCAGCTGGGATGGTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
||
| CDS-3UTR CAA 90 bp | ACGTTCACATGGATGCTGGTAGAGCTTTGTCCTTGGGAATACAGTGGGAATACCCCTCCACAGGGGCCCTaGGGGCCAGCAGCTTGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: TFTWMLVELCPWEYSGNTPPQGP*GPAAWR Trigger: TCTCCAAGCTGCTGGCCCCAAGGGCCCCTGTGGAGG...GGTATTCCCACTGTATTCCCAAGGACAAAGCTCTACCAGCATCCATGTGAACGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
||
| CDS-3UTR CAA 90 bp | CTTGGATCTAAGTCTTTTTCCCATGCCCTTTTTCTAATGCCCTGTCTACCTTCCACGCTGCCCAGCGCGTaGCCGCCCAGGTTGAGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LGSKSFSHALFLMPCLPSTLPSA*PPRLRV Trigger: CACCCTCAACCTGGGCGGCAACGCGCTGGGCAGCGT...GGAAGGTAGACAGGGCATTAGAAAAAGGGCATGGGAAAAAGACTTAGATCCAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
||
| CDS-3UTR CAA 90 bp | ACGTTCACATGGATGCTGGTAGAGCTTTGTCCTTGGGAATACAGTGGGAATACCATGAAGGACAGGTTATaGTGGCGCAGCGACAGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: TFTWMLVELCPWEYSGNTMKDRL*WRSDRR Trigger: CCGCCTGTCGCTGCGCCACAATAACCTGTCCTTCAT...GGTATTCCCACTGTATTCCCAAGGACAAAGCTCTACCAGCATCCATGTGAACGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
||
| CDS TCA 72 bp | CGCGTGCCACGCTGCCCAGCGCGTTGCCGCCCAGGTTaGGGGTGCGCAGGCGGCGAAGGCCGCGGAAGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: RVPRCPARCRPG*GCAGGEGRGRR Trigger: CCGCCTTCCGCGGCCTTCGCCGCCTGCGCACCCTCAACCTGGGCGGCAACGCGCTGGGCAGCGTGGCACGCG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
||
| CDS CAA 90 bp | AGGTTGGCGAGGCCCCGGAGCGCGCCGGGCACCCGGCGGAAGAGATaGTCGAAGGCCGTGAGCTCGCGCAGGGCCGGCAGCTCGGCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: RLARPRSAPGTRRKR*SKAVSSRRAGSSAR Trigger: CCTGGCCGAGCTGCCGGCCCTGCGCGAGCTCACGGCCTTCGACAATCTCTTCCGCCGGGTGCCCGGCGCGCTCCGGGGCCTCGCCAACCT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
||
| CDS CAA 90 bp | GCGCCGCAGTCGCCAAAGGCCCCGGCATGCACCGCGCGCACGCGGTaGGCCTGCAGGCTGAGCGAGCGCAGACGCCGCATGCCCAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: APQSPKAPACTARTR*ACRLSERRRRMPSS Trigger: GCTGCTGGGCATGCGGCGTCTGCGCTCGCTCAGCCTGCAGGCCAACCGCGTGCGCGCGGTGCATGCCGGGGCCTTTGGCGACTGCGGCGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
||
| CDS TCA 72 bp | GGGCCGGCAGCTCGGCCAGGAGACGCTCGGGGACGCTaGAGAGGCGGCAGGCCGCCAGGTCCAGGCGGCGTA | + |
|
Preference number: 6 (lower is better) Translates to: GPAARPGDARGR*RGGRPPGPGGV Trigger: TACGCCGCCTGGACCTGGCGGCCTGCCGCCTCTTCAGCGTCCCCGAGCGTCTCCTGGCCGAGCTGCCGGCCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
||
| CDS CAA 72 bp | AGGCCCCGGAGCGCGCCGGGCACCCGGCGGAAGAGATaGTCGAAGGCCGTGAGCTCGCGCAGGGCCGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: RPRSAPGTRRKR*SKAVSSRRAGS Trigger: GCTGCCGGCCCTGCGCGAGCTCACGGCCTTCGACAATCTCTTCCGCCGGGTGCCCGGCGCGCTCCGGGGCCT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
||
| CDS TCA 72 bp | CGGCATGCACCGCGCGCACGCGGTTGGCCTGCAGGCTaGGCGAGCGCAGACGCCGCATGCCCAGCAGCGAGC | + |
|
Preference number: 6 (lower is better) Translates to: RHAPRARGWPAG*ASADAACPAAS Trigger: GCTCGCTGCTGGGCATGCGGCGTCTGCGCTCGCTCAGCCTGCAGGCCAACCGCGTGCGCGCGGTGCATGCCG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
||
| CDS GCA 72 bp | AAGGCCCCGGCATGCACCGCGCGCACGCGGTTGGCCTaGAGGCTGAGCGAGCGCAGACGCCGCATGCCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: KAPACTARTRLA*RLSERRRRMPS Trigger: GCTGGGCATGCGGCGTCTGCGCTCGCTCAGCCTGCAGGCCAACCGCGTGCGCGCGGTGCATGCCGGGGCCTT 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
||
| CDS GCA 72 bp | TCCTCCAGGGCGCCGCAGTCGCCAAAGGCCCCGGCATaGACCGCGCGCACGCGGTTGGCCTGCAGGCTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: SSRAPQSPKAPA*TARTRLACRLS Trigger: GCTCAGCCTGCAGGCCAACCGCGTGCGCGCGGTGCATGCCGGGGCCTTTGGCGACTGCGGCGCCCTGGAGGA 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
||
| CDS CCA 72 bp | CGATGCGGCTGCGCTCGAAATGAGCGTGCGTCAGGTTaGCGAGGCCCCGGAGCGCGCCGGGCACCCGGCGGA | + |
|
Preference number: 6 (lower is better) Translates to: RCGCARNERASG*RGPGARRAPGG Trigger: TCCGCCGGGTGCCCGGCGCGCTCCGGGGCCTCGCCAACCTGACGCACGCTCATTTCGAGCGCAGCCGCATCG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
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| CDS TCA 72 bp | CGCCGGGCACCCGGCGGAAGAGATTGTCGAAGGCCGTaGGCTCGCGCAGGGCCGGCAGCTCGGCCAGGAGAC | + |
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Preference number: 6 (lower is better) Translates to: RRAPGGRDCRRP*ARAGPAARPGD Trigger: GTCTCCTGGCCGAGCTGCCGGCCCTGCGCGAGCTCACGGCCTTCGACAATCTCTTCCGCCGGGTGCCCGGCG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
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| CDS TCA 72 bp | CCGGAGGCCACGGCCTCGATGCGGCTGCGCTCGAAATaGGCGTGCGTCAGGTTGGCGAGGCCCCGGAGCGCG | + |
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Preference number: 6 (lower is better) Translates to: PEATASMRLRSK*ACVRLARPRSA Trigger: CGCGCTCCGGGGCCTCGCCAACCTGACGCACGCTCATTTCGAGCGCAGCCGCATCGAGGCCGTGGCCTCCGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
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| CDS TCA 72 bp | GGGCACCCGCTGGAGGCCCGCACGGTCACAGCGCACTaGGCAGCCACGTTCCACGTGGCTGCAGGTGCAGGC | + |
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Preference number: 6 (lower is better) Translates to: GHPLEARTVTAH*AATFHVAAGAG Trigger: GCCTGCACCTGCAGCCACGTGGAACGTGGCTGCTCAGTGCGCTGTGACCGTGCGGGCCTCCAGCGGGTGCCC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
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| CDS GCA 72 bp | TGTGGCGCAGCGACAGGCGGCGCAACGACGGCAGCGTaGCAAAGGCCCGCTCGCCCAGGATGCGCAGGCCAT | + |
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Preference number: 6 (lower is better) Translates to: CGAATGGATTAA*QRPARPGCAGH Trigger: ATGGCCTGCGCATCCTGGGCGAGCGGGCCTTTGGCACGCTGCCGTCGTTGCGCCGCCTGTCGCTGCGCCACA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
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| CDS CAA 72 bp | TCTGAGAACCAGGCGCGTGCCACGCTGCCCAGCGCGTaGCCGCCCAGGTTGAGGGTGCGCAGGCGGCGAAGG | + |
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Preference number: 6 (lower is better) Translates to: SENQARATLPSA*PPRLRVRRRRR Trigger: CCTTCGCCGCCTGCGCACCCTCAACCTGGGCGGCAACGCGCTGGGCAGCGTGGCACGCGCCTGGTTCTCAGA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
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| CDS GCA 72 bp | CCAGCAGCGAGCCGGAGGCCACGGCCTCGATGCGGCTaGGCTCGAAATGAGCGTGCGTCAGGTTGGCGAGGC | + |
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Preference number: 6 (lower is better) Translates to: PAASRRPRPRCG*ARNERASGWRG Trigger: GCCTCGCCAACCTGACGCACGCTCATTTCGAGCGCAGCCGCATCGAGGCCGTGGCCTCCGGCTCGCTGCTGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
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| CDS CCA 72 bp | TCCAGATCGATGGAGGCCGCCTCGCACGGAAACTCCTaGGGCACCCGCTGGAGGCCCGCACGGTCACAGCGC | + |
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Preference number: 6 (lower is better) Translates to: SRSMEAASHGNS*GTRWRPARSQR Trigger: GCGCTGTGACCGTGCGGGCCTCCAGCGGGTGCCCCAGGAGTTTCCGTGCGAGGCGGCCTCCATCGATCTGGA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
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| CDS GCA 72 bp | ACGACGGCAGCGTGCCAAAGGCCCGCTCGCCCAGGATaGGCAGGCCATTCCGGTCCAGATCGATGGAGGCCG | + |
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Preference number: 6 (lower is better) Translates to: TTAACQRPARPG*AGHSGPDRWRP Trigger: CGGCCTCCATCGATCTGGACCGGAATGGCCTGCGCATCCTGGGCGAGCGGGCCTTTGGCACGCTGCCGTCGT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
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| CDS GCA 72 bp | GCATGCCCAGCAGCGAGCCGGAGGCCACGGCCTCGATaGGGCTGCGCTCGAAATGAGCGTGCGTCAGGTTGG | + |
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Preference number: 6 (lower is better) Translates to: ACPAASRRPRPR*GCARNERASGW Trigger: CCAACCTGACGCACGCTCATTTCGAGCGCAGCCGCATCGAGGCCGTGGCCTCCGGCTCGCTGCTGGGCATGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
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| CDS CCA 72 bp | CGCCCAGGATGCGCAGGCCATTCCGGTCCAGATCGATaGAGGCCGCCTCGCACGGAAACTCCTGGGGCACCC | + |
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Preference number: 6 (lower is better) Translates to: RPGCAGHSGPDR*RPPRTETPGAP Trigger: GGGTGCCCCAGGAGTTTCCGTGCGAGGCGGCCTCCATCGATCTGGACCGGAATGGCCTGCGCATCCTGGGCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
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| CDS CAA 90 bp | CGCGGCAGGCCCTTGAAGGCGCCGGGCGTGATGAAGGACAGGTTATaGTGGCGCAGCGACAGGCGGCGCAACGACGGCAGCGTGCCAAAG | + |
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Preference number: 6 (lower is better) Translates to: RGRPLKAPGVMKDRL*WRSDRRRNDGSVPK Trigger: CTTTGGCACGCTGCCGTCGTTGCGCCGCCTGTCGCTGCGCCACAATAACCTGTCCTTCATCACGCCCGGCGCCTTCAAGGGCCTGCCGCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
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| CDS CAA 90 bp | TCACCGTTGTGCGCCAGGCGCAGCTCGGCCAACCGCGGCAGGCCCTaGAAGGCGCCGGGCGTGATGAAGGACAGGTTATTGTGGCGCAGC | + |
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Preference number: 6 (lower is better) Translates to: SPLCARRSSANRGRP*KAPGVMKDRLLWRS Trigger: GCTGCGCCACAATAACCTGTCCTTCATCACGCCCGGCGCCTTCAAGGGCCTGCCGCGGTTGGCCGAGCTGCGCCTGGCGCACAACGGTGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
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| CDS TCA 72 bp | GGGCCCTTGGGGCCAGCAGCTTGGAGAGGAGGCTGCTaGACCTGCTCACAGTGGTGGCCACTGGCTCCGGAC | + |
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Preference number: 6 (lower is better) Translates to: GPLGPAAWRGGC*TCSQWWPLAPD Trigger: GTCCGGAGCCAGTGGCCACCACTGTGAGCAGGTTCAGCAGCCTCCTCTCCAAGCTGCTGGCCCCAAGGGCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
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| CDS CAA 72 bp | CCCTTGAAGGCGCCGGGCGTGATGAAGGACAGGTTATaGTGGCGCAGCGACAGGCGGCGCAACGACGGCAGC | + |
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Preference number: 6 (lower is better) Translates to: PLKAPGVMKDRL*WRSDRRRNDGS Trigger: GCTGCCGTCGTTGCGCCGCCTGTCGCTGCGCCACAATAACCTGTCCTTCATCACGCCCGGCGCCTTCAAGGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
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| CDS CCA 72 bp | TTGAAGGCGCCGGGCGTGATGAAGGACAGGTTATTGTaGCGCAGCGACAGGCGGCGCAACGACGGCAGCGTG | + |
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Preference number: 6 (lower is better) Translates to: LKAPGVMKDRLL*RSDRRRNDGSV Trigger: CACGCTGCCGTCGTTGCGCCGCCTGTCGCTGCGCCACAATAACCTGTCCTTCATCACGCCCGGCGCCTTCAA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
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| CDS CAA 90 bp | CCTGGCTGGAAAGCGGCCCAGGAGAGCACAGTGAGACGGTTGCCATaGAGATGCAGGGCCAGGAGGCCCGAGAGGTTCTGGAAGGCGCCT | + |
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Preference number: 6 (lower is better) Translates to: PGWKAAQESTVRRLP*RCRARRPERFWKAP Trigger: AGGCGCCTTCCAGAACCTCTCGGGCCTCCTGGCCCTGCATCTCAATGGCAACCGTCTCACTGTGCTCTCCTGGGCCGCTTTCCAGCCAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
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| CDS GCA 72 bp | GCCCAGGAGAGCACAGTGAGACGGTTGCCATTGAGATaGAGGGCCAGGAGGCCCGAGAGGTTCTGGAAGGCG | + |
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Preference number: 6 (lower is better) Translates to: AQESTVRRLPLR*RARRPERFWKA Trigger: CGCCTTCCAGAACCTCTCGGGCCTCCTGGCCCTGCATCTCAATGGCAACCGTCTCACTGTGCTCTCCTGGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
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| CDS CCA 72 bp | GAGGAGGCTGCTGAACCTGCTCACAGTGGTGGCCACTaGCTCCGGACTCGGGCCAGGACTGGACGTGGTAAA | + |
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Preference number: 6 (lower is better) Translates to: EEAAEPAHSGGH*LRTRARTGRGK Trigger: TTTACCACGTCCAGTCCTGGCCCGAGTCCGGAGCCAGTGGCCACCACTGTGAGCAGGTTCAGCAGCCTCCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
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| CDS CAA 72 bp | TCATTCAACGAGACGTTGACCAGCTCCCAGGTGGTATaGGCTACCTCCTCCACAGGGGCCCTTGGGGCCAGC | + |
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Preference number: 6 (lower is better) Translates to: SFNETLTSSQVV*ATSSTGALGAS Trigger: GCTGGCCCCAAGGGCCCCTGTGGAGGAGGTAGCCAATACCACCTGGGAGCTGGTCAACGTCTCGTTGAATGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
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| CDS CAA 90 bp | AAGAAACCTGGCTGGAAAGCGGCCCAGGAGAGCACAGTGAGACGGTaGCCATTGAGATGCAGGGCCAGGAGGCCCGAGAGGTTCTGGAAG | + |
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Preference number: 6 (lower is better) Translates to: KKPGWKAAQESTVRR*PLRCRARRPERFWK Trigger: CTTCCAGAACCTCTCGGGCCTCCTGGCCCTGCATCTCAATGGCAACCGTCTCACTGTGCTCTCCTGGGCCGCTTTCCAGCCAGGTTTCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
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| CDS CCA 72 bp | CCATTGAGATGCAGGGCCAGGAGGCCCGAGAGGTTCTaGAAGGCGCCTTCCTCAACAAAGGTGATGCTGTTG | + |
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Preference number: 6 (lower is better) Translates to: PLRCRARRPERF*KAPSSTKVMLL Trigger: CAACAGCATCACCTTTGTTGAGGAAGGCGCCTTCCAGAACCTCTCGGGCCTCCTGGCCCTGCATCTCAATGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050434.6 |
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