Pregenerated sensors for NXPH3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046719Ensembl transcript IDs: ENSMUST00000058866.8
Found 62 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGGGGATTTCTGGAAAGGAATGGCCTGGCTGGTGACCGAGAGTCATaGCAGCAAACACCCAAGGGTGGGGATGAGGTTGCCATTTCAGCC | + |
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Preference number: 1 (lower is better) Translates to: RGFLERNGLAGDRES*QQTPKGGDEVAISA Trigger: GGCTGAAATGGCAACCTCATCCCCACCCTTGGGTGTTTGCTGTCATGACTCTCGGTCACCAGCCAGGCCATTCCTTTCCAGAAATCCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058866.8 |
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| 3UTR TCA 90 bp | CTGACCACTGTCCTCCTTCTGAATAGCAAGGAGAGAGACAAAGGTTaGGGTCTTCTCTGTGGCTTGATCTGGGGTTGCCTGGCTTCCCTG | + |
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Preference number: 1 (lower is better) Translates to: LTTVLLLNSKERDKG*GLLCGLIWGCLASL Trigger: CAGGGAAGCCAGGCAACCCCAGATCAAGCCACAGAGAAGACCTCAACCTTTGTCTCTCTCCTTGCTATTCAGAAGGAGGACAGTGGTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058866.8 |
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| 3UTR-3UTR CCA 90 bp | TCTTCTCTGTGGCTTGATCTGGGGTTGCCTGGCTTCCCTGCCCAGGGGCCTCGGGGTTGGGCACAGCACTaGGGACCCTTCCCCAACACC | + |
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Preference number: 2 (lower is better) Translates to: SSLWLDLGLPGFPAQGPRGWAQH*GPFPNT Trigger: GGTGTTGGGGAAGGGTCCCCAGTGCTGTGCCCAACC...CCGAGGCCCCTGGGCAGGGAAGCCAGGCAACCCCAGATCAAGCCACAGAGAAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000058866.8 |
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| 3UTR-3UTR GCA 90 bp | GGAGAGAGACAAAGGTTGAGGTCTTCTCTGTGGCTTGATCTGGGGTTGCCTGGCAGCCAGCCAGCCTCCTaGACCGGCCTCTGCCGCCCA | + |
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Preference number: 2 (lower is better) Translates to: GERQRLRSSLWLDLGLPGSQPAS*TGLCRP Trigger: TGGGCGGCAGAGGCCGGTGCAGGAGGCTGGCTGGCT...GCCAGGCAACCCCAGATCAAGCCACAGAGAAGACCTCAACCTTTGTCTCTCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058866.8 |
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| 3UTR-3UTR GCA 90 bp | ATCCCTATCCCAGAATGCCCCAGTCTTACAGGAAGAACTGGCTGTCAAGGGAGGGAAGGGGCTGCCCACTaGCGGCTCCCACGGGAGACG | + |
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Preference number: 2 (lower is better) Translates to: IPIPECPSLTGRTGCQGREGAAH*RLPRET Trigger: CGTCTCCCGTGGGAGCCGGCAGTGGGCAGCCCCTTC...CCTCCCTTGACAGCCAGTTCTTCCTGTAAGACTGGGGCATTCTGGGATAGGGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058866.8 |
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| 3UTR-3UTR TCA 90 bp | GGAGAGAGACAAAGGTTGAGGTCTTCTCTGTGGCTTGATCTGGGGTTGCCTGGCCACCCCCTCCCTACCTaGGGTCCATCCCTTTCCCTG | + |
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Preference number: 2 (lower is better) Translates to: GERQRLRSSLWLDLGLPGHPLPT*GPSLSL Trigger: CAGGGAAAGGGATGGACCTCAGGTAGGGAGGGGGTG...GCCAGGCAACCCCAGATCAAGCCACAGAGAAGACCTCAACCTTTGTCTCTCTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058866.8 |
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| 3UTR-3UTR GCA 90 bp | AACAAGTATCTTCTAACCTCAGGTTGGGCACAGCACTGGGGACCCTTCCCCAACGTCCATCCCTTTCCCTaGCCAGTGTCCAGCCAGCCA | + |
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Preference number: 2 (lower is better) Translates to: NKYLLTSGWAQHWGPFPNVHPFP*PVSSQP Trigger: TGGCTGGCTGGACACTGGGCAGGGAAAGGGATGGAC...GTTGGGGAAGGGTCCCCAGTGCTGTGCCCAACCTGAGGTTAGAAGATACTTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058866.8 |
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| 3UTR-3UTR TCA 90 bp | ATCCCTATCCCAGAATGCCCCAGTCTTACAGGAAGAACTGGCTGTCAAGGGAGGGAGAGAGACAAAGGTTaGGGTCTTCTCTGTGGCTTG | + |
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Preference number: 2 (lower is better) Translates to: IPIPECPSLTGRTGCQGRERDKG*GLLCGL Trigger: CAAGCCACAGAGAAGACCTCAACCTTTGTCTCTCTC...CCTCCCTTGACAGCCAGTTCTTCCTGTAAGACTGGGGCATTCTGGGATAGGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058866.8 |
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| 3UTR-3UTR TCA 90 bp | ATCCCTATCCCAGAATGCCCCAGTCTTACAGGAAGAACTGGCTGTCAAGGGAGGCCACTGTCCTCCTTCTaGATAGCAAGGAGAGAGACA | + |
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Preference number: 2 (lower is better) Translates to: IPIPECPSLTGRTGCQGRPLSSF*IARRET Trigger: TGTCTCTCTCCTTGCTATTCAGAAGGAGGACAGTGG...CCTCCCTTGACAGCCAGTTCTTCCTGTAAGACTGGGGCATTCTGGGATAGGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058866.8 |
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| 3UTR-3UTR CAA 90 bp | TCTTCTCTGTGGCTTGATCTGGGGTTGCCTGGCTTCCCTGCCCAGGGGCCTCGGGGCCCAGCATCTGCTTaGGATAGGAGGGAAAGCCCT | + |
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Preference number: 3 (lower is better) Translates to: SSLWLDLGLPGFPAQGPRGPASA*DRRESP Trigger: AGGGCTTTCCCTCCTATCCAAAGCAGATGCTGGGCC...CCGAGGCCCCTGGGCAGGGAAGCCAGGCAACCCCAGATCAAGCCACAGAGAAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058866.8 |
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| 3UTR TCA 72 bp | GGTTGGGCACAGCACTGGGGACCCTTCCCCAACACCTaGCGCTTGATCCTGACCCACCAGGCCTCTCTTCCT | + |
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Preference number: 3 (lower is better) Translates to: GWAQHWGPFPNT*RLILTHQASLP Trigger: AGGAAGAGAGGCCTGGTGGGTCAGGATCAAGCGTCAGGTGTTGGGGAAGGGTCCCCAGTGCTGTGCCCAACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058866.8 |
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| 3UTR TCA 72 bp | CCGAGAGTCATGACAGCAAACACCCAAGGGTGGGGATaGGGTTGCCATTTCAGCCTCAGTGCGGGGGAGGGG | + |
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Preference number: 3 (lower is better) Translates to: PRVMTANTQGWG*GCHFSLSAGEG Trigger: CCCCTCCCCCGCACTGAGGCTGAAATGGCAACCTCATCCCCACCCTTGGGTGTTTGCTGTCATGACTCTCGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058866.8 |
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| 3UTR-3UTR CAA 90 bp | ATCCCTATCCCAGAATGCCCCAGTCTTACAGGAAGAACTGGCTGTCAAGGGAGGTGGCTTGATCTGGGGTaGCCTGGCTTCCCTGCCCAG | + |
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Preference number: 3 (lower is better) Translates to: IPIPECPSLTGRTGCQGRWLDLG*PGFPAQ Trigger: CTGGGCAGGGAAGCCAGGCAACCCCAGATCAAGCCA...CCTCCCTTGACAGCCAGTTCTTCCTGTAAGACTGGGGCATTCTGGGATAGGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058866.8 |
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| 3UTR TCA 72 bp | GGAGAGGGGATTTCTGGAAAGGAATGGCCTGGCTGGTaGCCGAGAGTCATGACAGCAAACACCCAAGGGTGG | + |
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Preference number: 3 (lower is better) Translates to: GEGISGKEWPGW*PRVMTANTQGW Trigger: CCACCCTTGGGTGTTTGCTGTCATGACTCTCGGTCACCAGCCAGGCCATTCCTTTCCAGAAATCCCCTCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058866.8 |
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| 3UTR-3UTR CAA 90 bp | ATCCCTATCCCAGAATGCCCCAGTCTTACAGGAAGAACTGGCTGTCAAGGGAGGTCTTCTAACCTCAGGTaGGGCACAGCACTGGGGACC | + |
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Preference number: 3 (lower is better) Translates to: IPIPECPSLTGRTGCQGRSSNLR*GTALGT Trigger: GGTCCCCAGTGCTGTGCCCAACCTGAGGTTAGAAGA...CCTCCCTTGACAGCCAGTTCTTCCTGTAAGACTGGGGCATTCTGGGATAGGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058866.8 |
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| 3UTR-3UTR CAA 90 bp | ATCCCTATCCCAGAATGCCCCAGTCTTACAGGAAGAACTGGCTGTCAAGGGAGGGGTCTTCTCTGTGGCTaGATCTGGGGTTGCCTGGCT | + |
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Preference number: 3 (lower is better) Translates to: IPIPECPSLTGRTGCQGRGLLCG*IWGCLA Trigger: AGCCAGGCAACCCCAGATCAAGCCACAGAGAAGACC...CCTCCCTTGACAGCCAGTTCTTCCTGTAAGACTGGGGCATTCTGGGATAGGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058866.8 |
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| 3UTR-3UTR CAA 90 bp | CCCAGCAAAGGAGGCTCTATCCCTATCCCAGAATGCCCCAGTCTTACAGGAAGAAAGTTGTCTACACAGTaGGACTCCCCTTTGCTGACC | + |
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Preference number: 3 (lower is better) Translates to: PSKGGSIPIPECPSLTGRKLSTQ*DSPLLT Trigger: GGTCAGCAAAGGGGAGTCCAACTGTGTAGACAACTT...TCTTCCTGTAAGACTGGGGCATTCTGGGATAGGGATAGAGCCTCCTTTGCTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058866.8 |
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| CDS-3UTR TCA 90 bp | TCTTCTCTGTGGCTTGATCTGGGGTTGCCTGGCTTCCCTGCCCAGGGGCCTCGGGACTTAGGTGAGATATaGCCTCGCTTGCGAGGCACC | + |
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Preference number: 4 (lower is better) Translates to: SSLWLDLGLPGFPAQGPRDLGEI*PRLRGT Trigger: GGTGCCTCGCAAGCGAGGTCATATCTCACCTAAGTC...CCGAGGCCCCTGGGCAGGGAAGCCAGGCAACCCCAGATCAAGCCACAGAGAAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058866.8 |
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| CDS-3UTR CCA 90 bp | CAACACCTGACGCTTGATCCTGACCCACCAGGCCTCTCTTCCTCTCCACCCCCTCGAGGCTGGCCCTCATaGTCATCGTGTTCAGGGTCC | + |
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Preference number: 4 (lower is better) Translates to: QHLTLDPDPPGLSSSPPPRGWPS*SSCSGS Trigger: GGACCCTGAACACGATGACCATGAGGGCCAGCCTCG...AGGGGGTGGAGAGGAAGAGAGGCCTGGTGGGTCAGGATCAAGCGTCAGGTGTTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058866.8 |
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| CDS-3UTR CCA 90 bp | GGAGAGAGACAAAGGTTGAGGTCTTCTCTGTGGCTTGATCTGGGGTTGCCTGGCACAGCCCTAGGAGGGTaGAGTTGGCCAAGGGGCGGG | + |
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Preference number: 4 (lower is better) Translates to: GERQRLRSSLWLDLGLPGTALGG*SWPRGG Trigger: CCCGCCCCTTGGCCAACTCCACCCTCCTAGGGCTGT...GCCAGGCAACCCCAGATCAAGCCACAGAGAAGACCTCAACCTTTGTCTCTCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058866.8 |
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| CDS-3UTR CCA 90 bp | GGGAGGGAGCACTCTCAGCAGGTGGTTAGGGCAGAGGATGGGCATACAGCACATTTTGTTTGGGGCGGTTaGGGGGCTGCCCAAGGACAC | + |
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Preference number: 4 (lower is better) Translates to: GREHSQQVVRAEDGHTAHFVWGG*GAAQGH Trigger: GTGTCCTTGGGCAGCCCCCCAACCGCCCCAAACAAA...ATGTGCTGTATGCCCATCCTCTGCCCTAACCACCTGCTGAGAGTGCTCCCTCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000058866.8 |
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| CDS-3UTR CCA 90 bp | GGGAGGGAGCACTCTCAGCAGGTGGTTAGGGCAGAGGATGGGCATACAGCACATATCTTGGCTGGGTCGTaGGTACAGAGCGAGGTCCGG | + |
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Preference number: 4 (lower is better) Translates to: GREHSQQVVRAEDGHTAHILAGS*VQSEVR Trigger: CCGGACCTCGCTCTGTACCCACGACCCAGCCAAGAT...ATGTGCTGTATGCCCATCCTCTGCCCTAACCACCTGCTGAGAGTGCTCCCTCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058866.8 |
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| CDS-3UTR CCA 90 bp | CAACACCTGACGCTTGATCCTGACCCACCAGGCCTCTCTTCCTCTCCACCCCCTCACGGGAACAGATCTTaGCTGGGTCGTGGGTACAGA | + |
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Preference number: 4 (lower is better) Translates to: QHLTLDPDPPGLSSSPPPHGNRS*LGRGYR Trigger: TCTGTACCCACGACCCAGCCAAGATCTGTTCCCGTG...AGGGGGTGGAGAGGAAGAGAGGCCTGGTGGGTCAGGATCAAGCGTCAGGTGTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058866.8 |
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| CDS-3UTR CCA 90 bp | AACAAGTATCTTCTAACCTCAGGTTGGGCACAGCACTGGGGACCCTTCCCCAACGGGAGCAGCTCCAGGTaGCCGAGCTCTGAGCGTGGT | + |
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Preference number: 4 (lower is better) Translates to: NKYLLTSGWAQHWGPFPNGSSSR*PSSERG Trigger: ACCACGCTCAGAGCTCGGCCACCTGGAGCTGCTCCC...GTTGGGGAAGGGTCCCCAGTGCTGTGCCCAACCTGAGGTTAGAAGATACTTGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058866.8 |
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| CDS-3UTR TCA 90 bp | AACAAGTATCTTCTAACCTCAGGTTGGGCACAGCACTGGGGACCCTTCCCCAACGGCGGAAGTGGACGCTaGAGGTCCCGTTTCCGTGGT | + |
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Preference number: 4 (lower is better) Translates to: NKYLLTSGWAQHWGPFPNGGSGR*RSRFRG Trigger: ACCACGGAAACGGGACCTTCAGCGTCCACTTCCGCC...GTTGGGGAAGGGTCCCCAGTGCTGTGCCCAACCTGAGGTTAGAAGATACTTGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058866.8 |
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| CDS-3UTR CCA 90 bp | ATCCCTATCCCAGAATGCCCCAGTCTTACAGGAAGAACTGGCTGTCAAGGGAGGTGGCCCGTGGCGTTGTaGCGGAAGTGGACGCTGAAG | + |
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Preference number: 4 (lower is better) Translates to: IPIPECPSLTGRTGCQGRWPVAL*RKWTLK Trigger: CTTCAGCGTCCACTTCCGCCACAACGCCACGGGCCA...CCTCCCTTGACAGCCAGTTCTTCCTGTAAGACTGGGGCATTCTGGGATAGGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058866.8 |
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| CDS-3UTR CCA 90 bp | TGGCTGGTGACCGAGAGTCATGACAGCAAACACCCAAGGGTGGGGATGAGGTTGACAACTTTGAAGGGCTaGGAGCAGCTCCAGGTGGCC | + |
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Preference number: 4 (lower is better) Translates to: WLVTESHDSKHPRVGMRLTTLKG*EQLQVA Trigger: GGCCACCTGGAGCTGCTCCCAGCCCTTCAAAGTTGT...CAACCTCATCCCCACCCTTGGGTGTTTGCTGTCATGACTCTCGGTCACCAGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058866.8 |
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| CDS-3UTR TCA 90 bp | ATCCCTATCCCAGAATGCCCCAGTCTTACAGGAAGAACTGGCTGTCAAGGGAGGGGGGCGGGACTTAGGTaGGATATGACCTCGCTTGCG | + |
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Preference number: 4 (lower is better) Translates to: IPIPECPSLTGRTGCQGRGAGLR*DMTSLA Trigger: CGCAAGCGAGGTCATATCTCACCTAAGTCCCGCCCC...CCTCCCTTGACAGCCAGTTCTTCCTGTAAGACTGGGGCATTCTGGGATAGGGAT 57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000058866.8 |
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| CDS-3UTR TCA 90 bp | GGAGAGAGACAAAGGTTGAGGTCTTCTCTGTGGCTTGATCTGGGGTTGCCTGGCAGACGCAGACAACTTTaGAGGGCTGGGAGCAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: GERQRLRSSLWLDLGLPGRRRQL*RAGSSS Trigger: GGAGCTGCTCCCAGCCCTTCAAAGTTGTCTGCGTCT...GCCAGGCAACCCCAGATCAAGCCACAGAGAAGACCTCAACCTTTGTCTCTCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058866.8 |
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| CDS-3UTR CCA 90 bp | AACAAGTATCTTCTAACCTCAGGTTGGGCACAGCACTGGGGACCCTTCCCCAACACCCTAGGCCGAGGCTaGCCCTCATGGTCATCGTGT | + |
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Preference number: 4 (lower is better) Translates to: NKYLLTSGWAQHWGPFPNTLGRG*PSWSSC Trigger: ACACGATGACCATGAGGGCCAGCCTCGGCCTAGGGT...GTTGGGGAAGGGTCCCCAGTGCTGTGCCCAACCTGAGGTTAGAAGATACTTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058866.8 |
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| CDS-3UTR TCA 90 bp | ATCCCTATCCCAGAATGCCCCAGTCTTACAGGAAGAACTGGCTGTCAAGGGAGGCCACAATCTTGCCTGTaGCCAGCAGGTTCAGGGCCA | + |
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Preference number: 4 (lower is better) Translates to: IPIPECPSLTGRTGCQGRPQSCL*PAGSGP Trigger: TGGCCCTGAACCTGCTGGTCACAGGCAAGATTGTGG...CCTCCCTTGACAGCCAGTTCTTCCTGTAAGACTGGGGCATTCTGGGATAGGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058866.8 |
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| CDS-3UTR CCA 90 bp | ATCCCTATCCCAGAATGCCCCAGTCTTACAGGAAGAACTGGCTGTCAAGGGAGGATGGAGATGTTACCTTaGCCCGTGGCGTTGTGGCGG | + |
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Preference number: 4 (lower is better) Translates to: IPIPECPSLTGRTGCQGRMEMLP*PVALWR Trigger: CCGCCACAACGCCACGGGCCAAGGTAACATCTCCAT...CCTCCCTTGACAGCCAGTTCTTCCTGTAAGACTGGGGCATTCTGGGATAGGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058866.8 |
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| CDS-3UTR TCA 90 bp | TGGCTGGTGACCGAGAGTCATGACAGCAAACACCCAAGGGTGGGGATGAGGTTGACTCCATCCGGCAGTTaGAAATTTTGGATGCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: WLVTESHDSKHPRVGMRLTPSGS*KFWMPW Trigger: CCAAGGCATCCAAAATTTTCAACTGCCGGATGGAGT...CAACCTCATCCCCACCCTTGGGTGTTTGCTGTCATGACTCTCGGTCACCAGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058866.8 |
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| CDS-3UTR CCA 90 bp | AACAAGTATCTTCTAACCTCAGGTTGGGCACAGCACTGGGGACCCTTCCCCAACAAGGTCCCGTTTCCGTaGTCCACAATCTTGCCTGTG | + |
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Preference number: 4 (lower is better) Translates to: NKYLLTSGWAQHWGPFPNKVPFP*STILPV Trigger: CACAGGCAAGATTGTGGACCACGGAAACGGGACCTT...GTTGGGGAAGGGTCCCCAGTGCTGTGCCCAACCTGAGGTTAGAAGATACTTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058866.8 |
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| CDS-3UTR CCA 90 bp | CAAGGAGAGAGACAAAGGTTGAGGTCTTCTCTGTGGCTTGATCTGGGGTTGCCTGGAACAGATCTTGGCTaGGTCGTGGGTACAGAGCGA | + |
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Preference number: 4 (lower is better) Translates to: QGERQRLRSSLWLDLGLPGTDLG*VVGTER Trigger: TCGCTCTGTACCCACGACCCAGCCAAGATCTGTTCC...AGGCAACCCCAGATCAAGCCACAGAGAAGACCTCAACCTTTGTCTCTCTCCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058866.8 |
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| CDS-3UTR TCA 90 bp | CCCAGCAAAGGAGGCTCTATCCCTATCCCAGAATGCCCCAGTCTTACAGGAAGAATCTGCTGCTCTTGGTaGAACTCCACAGCTTTGCTG | + |
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Preference number: 4 (lower is better) Translates to: PSKGGSIPIPECPSLTGRICCSW*NSTALL Trigger: CAGCAAAGCTGTGGAGTTTCACCAAGAGCAGCAGAT...TCTTCCTGTAAGACTGGGGCATTCTGGGATAGGGATAGAGCCTCCTTTGCTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058866.8 |
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| CDS-3UTR TCA 90 bp | ATCCCTATCCCAGAATGCCCCAGTCTTACAGGAAGAACTGGCTGTCAAGGGAGGATGCCTTGGCTTCGATaGAGATCTGCTGCTCTTGGT | + |
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Preference number: 4 (lower is better) Translates to: IPIPECPSLTGRTGCQGRMPWLR*RSAALG Trigger: ACCAAGAGCAGCAGATCTTCATCGAAGCCAAGGCAT...CCTCCCTTGACAGCCAGTTCTTCCTGTAAGACTGGGGCATTCTGGGATAGGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058866.8 |
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| CDS-3UTR TCA 90 bp | CAAGGAGAGAGACAAAGGTTGAGGTCTTCTCTGTGGCTTGATCTGGGGTTGCCTTCAGGGCCACTGTCTTaGTGTTGGAGTAGAAATCAC | + |
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Preference number: 4 (lower is better) Translates to: QGERQRLRSSLWLDLGLPSGPLS*CWSRNH Trigger: GTGATTTCTACTCCAACATCAAGACAGTGGCCCTGA...AGGCAACCCCAGATCAAGCCACAGAGAAGACCTCAACCTTTGTCTCTCTCCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058866.8 |
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| 3UTR CAA 72 bp | CTCCATCCTAAGTTGTCTACACAGTTGGACTCCCCTTaGCTGACCACTGTCCTCCTTCTGAATAGCAAGGAG | + |
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Preference number: 4 (lower is better) Translates to: LHPKLSTQLDSP*LTTVLLLNSKE Trigger: CTCCTTGCTATTCAGAAGGAGGACAGTGGTCAGCAAAGGGGAGTCCAACTGTGTAGACAACTTAGGATGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058866.8 |
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| CDS-3UTR GCA 90 bp | AACAAGTATCTTCTAACCTCAGGTTGGGCACAGCACTGGGGACCCTTCCCCAACCCAGTCGATAGTCCGTaGTATAGAAGGCAATATAGA | + |
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Preference number: 4 (lower is better) Translates to: NKYLLTSGWAQHWGPFPNPVDSP*YRRQYR Trigger: TCTATATTGCCTTCTATAGCACGGACTATCGACTGG...GTTGGGGAAGGGTCCCCAGTGCTGTGCCCAACCTGAGGTTAGAAGATACTTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058866.8 |
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| CDS-3UTR GCA 90 bp | ATCCCTATCCCAGAATGCCCCAGTCTTACAGGAAGAACTGGCTGTCAAGGGAGGGTTGAAAATTTTGGATaGCTTGGCTTCGATGAAGAT | + |
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Preference number: 4 (lower is better) Translates to: IPIPECPSLTGRTGCQGRVENFG*LGFDED Trigger: ATCTTCATCGAAGCCAAGGCATCCAAAATTTTCAAC...CCTCCCTTGACAGCCAGTTCTTCCTGTAAGACTGGGGCATTCTGGGATAGGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058866.8 |
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| CDS CCA 90 bp | CCAGGTGGCCGAGCTCTGAGCGTGGTCACGGGAACAGATCTTGGCTaGGTCGTGGGTACAGAGCGAGGTCCGGCGGCCCCGTTCTACCTT | + |
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Preference number: 5 (lower is better) Translates to: PGGRALSVVTGTDLG*VVGTERGPAAPFYL Trigger: AAGGTAGAACGGGGCCGCCGGACCTCGCTCTGTACCCACGACCCAGCCAAGATCTGTTCCCGTGACCACGCTCAGAGCTCGGCCACCTGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058866.8 |
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| CDS CCA 90 bp | AGCTCCAGGTGGCCGAGCTCTGAGCGTGGTCACGGGAACAGATCTTaGCTGGGTCGTGGGTACAGAGCGAGGTCCGGCGGCCCCGTTCTA | + |
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Preference number: 5 (lower is better) Translates to: SSRWPSSERGHGNRS*LGRGYRARSGGPVL Trigger: TAGAACGGGGCCGCCGGACCTCGCTCTGTACCCACGACCCAGCCAAGATCTGTTCCCGTGACCACGCTCAGAGCTCGGCCACCTGGAGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058866.8 |
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| CDS TCA 90 bp | CCTAGGAGGGTGGAGTTGGCCAAGGGGCGGGACTTAGGTGAGATATaGCCTCGCTTGCGAGGCACCCTAGGCCGAGGCTGGCCCTCATGG | + |
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Preference number: 5 (lower is better) Translates to: PRRVELAKGRDLGEI*PRLRGTLGRGWPSW Trigger: CCATGAGGGCCAGCCTCGGCCTAGGGTGCCTCGCAAGCGAGGTCATATCTCACCTAAGTCCCGCCCCTTGGCCAACTCCACCCTCCTAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058866.8 |
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| CDS-3UTR CAA 90 bp | TGGCTGGTGACCGAGAGTCATGACAGCAAACACCCAAGGGTGGGGATGAGGTTGCCTTGGCCCGTGGCGTaGTGGCGGAAGTGGACGCTG | + |
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Preference number: 5 (lower is better) Translates to: WLVTESHDSKHPRVGMRLPWPVA*WRKWTL Trigger: CAGCGTCCACTTCCGCCACAACGCCACGGGCCAAGG...CAACCTCATCCCCACCCTTGGGTGTTTGCTGTCATGACTCTCGGTCACCAGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058866.8 |
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| CDS CCA 90 bp | GGGGGTACAAGGCTGATGGAGATGTTACCTTGGCCCGTGGCGTTGTaGCGGAAGTGGACGCTGAAGGTCCCGTTTCCGTGGTCCACAATC | + |
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Preference number: 5 (lower is better) Translates to: GGTRLMEMLPWPVAL*RKWTLKVPFPWSTI Trigger: GATTGTGGACCACGGAAACGGGACCTTCAGCGTCCACTTCCGCCACAACGCCACGGGCCAAGGTAACATCTCCATCAGCCTTGTACCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058866.8 |
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| CDS-3UTR CAA 90 bp | TCTTCTCTGTGGCTTGATCTGGGGTTGCCTGGCTTCCCTGCCCAGGGGCCTCGGCGGCAGTTGAAAATTTaGGATGCCTTGGCTTCGATG | + |
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Preference number: 5 (lower is better) Translates to: SSLWLDLGLPGFPAQGPRRQLKI*DALASM Trigger: CATCGAAGCCAAGGCATCCAAAATTTTCAACTGCCG...CCGAGGCCCCTGGGCAGGGAAGCCAGGCAACCCCAGATCAAGCCACAGAGAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058866.8 |
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| CDS-3UTR CAA 90 bp | AACAAGTATCTTCTAACCTCAGGTTGGGCACAGCACTGGGGACCCTTCCCCAACGATGGAGATGTTACCTaGGCCCGTGGCGTTGTGGCG | + |
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Preference number: 5 (lower is better) Translates to: NKYLLTSGWAQHWGPFPNDGDVT*ARGVVA Trigger: CGCCACAACGCCACGGGCCAAGGTAACATCTCCATC...GTTGGGGAAGGGTCCCCAGTGCTGTGCCCAACCTGAGGTTAGAAGATACTTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058866.8 |
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| CDS-3UTR CAA 90 bp | CAAGGAGAGAGACAAAGGTTGAGGTCTTCTCTGTGGCTTGATCTGGGGTTGCCTAGGCGGGCCATCGTCTaGGCCGCAGATGACCAGATA | + |
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Preference number: 5 (lower is better) Translates to: QGERQRLRSSLWLDLGLPRRAIV*AADDQI Trigger: TATCTGGTCATCTGCGGCCAAGACGATGGCCCGCCT...AGGCAACCCCAGATCAAGCCACAGAGAAGACCTCAACCTTTGTCTCTCTCCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058866.8 |
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| CDS-3UTR CAA 90 bp | GAGAGACAAAGGTTGAGGTCTTCTCTGTGGCTTGATCTGGGGTTGCCTGGCTTCTCACGGGAACAGATCTaGGCTGGGTCGTGGGTACAG | + |
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Preference number: 5 (lower is better) Translates to: ERQRLRSSLWLDLGLPGFSREQI*AGSWVQ Trigger: CTGTACCCACGACCCAGCCAAGATCTGTTCCCGTGA...GAAGCCAGGCAACCCCAGATCAAGCCACAGAGAAGACCTCAACCTTTGTCTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058866.8 |
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| CDS-3UTR CAA 90 bp | GGGAGGGAGCACTCTCAGCAGGTGGTTAGGGCAGAGGATGGGCATACAGCACATAAAATTTTGGATGCCTaGGCTTCGATGAAGATCTGC | + |
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Preference number: 5 (lower is better) Translates to: GREHSQQVVRAEDGHTAHKILDA*ASMKIC Trigger: GCAGATCTTCATCGAAGCCAAGGCATCCAAAATTTT...ATGTGCTGTATGCCCATCCTCTGCCCTAACCACCTGCTGAGAGTGCTCCCTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058866.8 |
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| CDS-3UTR CAA 90 bp | GGAGAGAGACAAAGGTTGAGGTCTTCTCTGTGGCTTGATCTGGGGTTGCCTGGCCACTCCATCCGGCAGTaGAAAATTTTGGATGCCTTG | + |
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Preference number: 5 (lower is better) Translates to: GERQRLRSSLWLDLGLPGHSIRQ*KILDAL Trigger: CAAGGCATCCAAAATTTTCAACTGCCGGATGGAGTG...GCCAGGCAACCCCAGATCAAGCCACAGAGAAGACCTCAACCTTTGTCTCTCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058866.8 |
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| CDS-3UTR CAA 90 bp | GAGAGACAAAGGTTGAGGTCTTCTCTGTGGCTTGATCTGGGGTTGCCTGGCTTCGAAGATCTGCTGCTCTaGGTGAAACTCCACAGCTTT | + |
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Preference number: 5 (lower is better) Translates to: ERQRLRSSLWLDLGLPGFEDLLL*VKLHSF Trigger: AAAGCTGTGGAGTTTCACCAAGAGCAGCAGATCTTC...GAAGCCAGGCAACCCCAGATCAAGCCACAGAGAAGACCTCAACCTTTGTCTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058866.8 |
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| CDS GCA 90 bp | CCGTTCTACCTTCTCCCACTCCATCCGGCAGTTGAAAATTTTGGATaGCTTGGCTTCGATGAAGATCTGCTGCTCTTGGTGAAACTCCAC | + |
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Preference number: 5 (lower is better) Translates to: PFYLLPLHPAVENFG*LGFDEDLLLLVKLH Trigger: GTGGAGTTTCACCAAGAGCAGCAGATCTTCATCGAAGCCAAGGCATCCAAAATTTTCAACTGCCGGATGGAGTGGGAGAAGGTAGAACGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058866.8 |
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| CDS CCA 72 bp | CGAGCTCTGAGCGTGGTCACGGGAACAGATCTTGGCTaGGTCGTGGGTACAGAGCGAGGTCCGGCGGCCCCG | + |
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Preference number: 6 (lower is better) Translates to: RALSVVTGTDLG*VVGTERGPAAP Trigger: CGGGGCCGCCGGACCTCGCTCTGTACCCACGACCCAGCCAAGATCTGTTCCCGTGACCACGCTCAGAGCTCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058866.8 |
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| CDS CCA 72 bp | TGGCCGAGCTCTGAGCGTGGTCACGGGAACAGATCTTaGCTGGGTCGTGGGTACAGAGCGAGGTCCGGCGGC | + |
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Preference number: 6 (lower is better) Translates to: WPSSERGHGNRS*LGRGYRARSGG Trigger: GCCGCCGGACCTCGCTCTGTACCCACGACCCAGCCAAGATCTGTTCCCGTGACCACGCTCAGAGCTCGGCCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058866.8 |
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| CDS TCA 72 bp | GTGGAGTTGGCCAAGGGGCGGGACTTAGGTGAGATATaGCCTCGCTTGCGAGGCACCCTAGGCCGAGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: VELAKGRDLGEI*PRLRGTLGRGW Trigger: CCAGCCTCGGCCTAGGGTGCCTCGCAAGCGAGGTCATATCTCACCTAAGTCCCGCCCCTTGGCCAACTCCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058866.8 |
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| CDS TCA 72 bp | CCTCTGAGCCAGGCGGGCCATCGTCTTGGCCGCAGATaGCCAGATAGAGGCTGCCCTGCACTAGGAACACGA | + |
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Preference number: 6 (lower is better) Translates to: PLSQAGHRLGRR*PDRGCPALGTR Trigger: TCGTGTTCCTAGTGCAGGGCAGCCTCTATCTGGTCATCTGCGGCCAAGACGATGGCCCGCCTGGCTCAGAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058866.8 |
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| CDS CCA 72 bp | AGGCTGATGGAGATGTTACCTTGGCCCGTGGCGTTGTaGCGGAAGTGGACGCTGAAGGTCCCGTTTCCGTGG | + |
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Preference number: 6 (lower is better) Translates to: RLMEMLPWPVAL*RKWTLKVPFPW Trigger: CCACGGAAACGGGACCTTCAGCGTCCACTTCCGCCACAACGCCACGGGCCAAGGTAACATCTCCATCAGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058866.8 |
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| CDS CAA 72 bp | ACAAGGCTGATGGAGATGTTACCTTGGCCCGTGGCGTaGTGGCGGAAGTGGACGCTGAAGGTCCCGTTTCCG | + |
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Preference number: 6 (lower is better) Translates to: TRLMEMLPWPVA*WRKWTLKVPFP Trigger: CGGAAACGGGACCTTCAGCGTCCACTTCCGCCACAACGCCACGGGCCAAGGTAACATCTCCATCAGCCTTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058866.8 |
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| CDS GCA 72 bp | CTTCTCCCACTCCATCCGGCAGTTGAAAATTTTGGATaGCTTGGCTTCGATGAAGATCTGCTGCTCTTGGTG | + |
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Preference number: 6 (lower is better) Translates to: LLPLHPAVENFG*LGFDEDLLLLV Trigger: CACCAAGAGCAGCAGATCTTCATCGAAGCCAAGGCATCCAAAATTTTCAACTGCCGGATGGAGTGGGAGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058866.8 |
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| CDS CAA 72 bp | TCTACCTTCTCCCACTCCATCCGGCAGTTGAAAATTTaGGATGCCTTGGCTTCGATGAAGATCTGCTGCTCT | + |
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Preference number: 6 (lower is better) Translates to: STFSHSIRQLKI*DALASMKICCS Trigger: AGAGCAGCAGATCTTCATCGAAGCCAAGGCATCCAAAATTTTCAACTGCCGGATGGAGTGGGAGAAGGTAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058866.8 |
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