Pregenerated sensors for NXPH1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046178Ensembl transcript IDs: ENSMUST00000060369.4, ENSMUST00000160300.2
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACAAGCTCCTCCCTCCATAGAAAGAAAAGCCACCCTGTATCACCTTaGATGTGTCTACTGTATGCTGGGAAAAAGCTACTACACTGTGTT | + |
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Preference number: 1 (lower is better) Translates to: TSSSLHRKKSHPVSP*MCLLYAGKKLLHCV Trigger: AACACAGTGTAGTAGCTTTTTCCCAGCATACAGTAGACACATTCAAGGTGATACAGGGTGGCTTTTCTTTCTATGGAGGGAGGAGCTTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060369.4 ENSMUST00000160300.2 |
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| 3UTR-3UTR TCA 90 bp | TGCAAGAATGGATGCTCATGGGCCTCTATTCGTGACAGCATGTCTTCAGATGAGGACAGCCCTGTCCTATaGCCTTTAACTCCGCAGGCT | + |
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Preference number: 2 (lower is better) Translates to: CKNGCSWASIRDSMSSDEDSPVL*PLTPQA Trigger: AGCCTGCGGAGTTAAAGGTCATAGGACAGGGCTGTC...CTCATCTGAAGACATGCTGTCACGAATAGAGGCCCATGAGCATCCATTCTTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060369.4 ENSMUST00000160300.2 |
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| 3UTR-3UTR TCA 90 bp | TGCAAGAATGGATGCTCATGGGCCTCTATTCGTGACAGCATGTCTTCAGATGAGCCTTCTTCCTTAAGGTaGCAGCCCTGTCCTATGACC | + |
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Preference number: 2 (lower is better) Translates to: CKNGCSWASIRDSMSSDEPSSLR*QPCPMT Trigger: GGTCATAGGACAGGGCTGTCACCTTAAGGAAGAAGG...CTCATCTGAAGACATGCTGTCACGAATAGAGGCCCATGAGCATCCATTCTTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060369.4 ENSMUST00000160300.2 |
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| 3UTR-3UTR TCA 90 bp | TTTTCCACTAGCATGTGTGCACCAGTCAACAAGAGCAGCAAGGTAGACACATTCCCTTCTTCCTTAAGGTaGCAGCCCTGTCCTATGACC | + |
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Preference number: 2 (lower is better) Translates to: FSTSMCAPVNKSSKVDTFPSSLR*QPCPMT Trigger: GGTCATAGGACAGGGCTGTCACCTTAAGGAAGAAGG...GAATGTGTCTACCTTGCTGCTCTTGTTGACTGGTGCACACATGCTAGTGGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060369.4 ENSMUST00000160300.2 |
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| 3UTR-3UTR TCA 90 bp | CCATTTAACAAGCATATAACTCCTACAGTAGTATTCACCAGCACAGCTACTCCAGACAGCCCTGTCCTATaGCCTTTAACTCCGCAGGCT | + |
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Preference number: 2 (lower is better) Translates to: PFNKHITPTVVFTSTATPDSPVL*PLTPQA Trigger: AGCCTGCGGAGTTAAAGGTCATAGGACAGGGCTGTC...TGGAGTAGCTGTGCTGGTGAATACTACTGTAGGAGTTATATGCTTGTTAAATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060369.4 ENSMUST00000160300.2 |
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| 3UTR-3UTR TCA 90 bp | ATAAGACAGACACTTATAACTTACATGGTGTCTGCCCGGCATTTCCCTTCTCAACAGCATGTCTTCAGATaGGACTCTGAGATCTATGGT | + |
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Preference number: 2 (lower is better) Translates to: IRQTLITYMVSARHFPSQQHVFR*DSEIYG Trigger: ACCATAGATCTCAGAGTCTCATCTGAAGACATGCTG...TTGAGAAGGGAAATGCCGGGCAGACACCATGTAAGTTATAAGTGTCTGTCTTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060369.4 ENSMUST00000160300.2 |
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| 3UTR-3UTR TCA 90 bp | ATAAGACAGACACTTATAACTTACATGGTGTCTGCCCGGCATTTCCCTTCTCAAGATTTACAACTATGCTaGGAGATGAAGCTGACTGTG | + |
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Preference number: 2 (lower is better) Translates to: IRQTLITYMVSARHFPSQDLQLC*EMKLTV Trigger: CACAGTCAGCTTCATCTCTCAGCATAGTTGTAAATC...TTGAGAAGGGAAATGCCGGGCAGACACCATGTAAGTTATAAGTGTCTGTCTTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060369.4 ENSMUST00000160300.2 |
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| 3UTR-3UTR TCA 90 bp | ATAAGACAGACACTTATAACTTACATGGTGTCTGCCCGGCATTTCCCTTCTCAAATGATAGATGTGAGCTaGAATGTGCAAGAATGGATG | + |
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Preference number: 2 (lower is better) Translates to: IRQTLITYMVSARHFPSQMIDVS*NVQEWM Trigger: CATCCATTCTTGCACATTTCAGCTCACATCTATCAT...TTGAGAAGGGAAATGCCGGGCAGACACCATGTAAGTTATAAGTGTCTGTCTTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060369.4 ENSMUST00000160300.2 |
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| 3UTR-3UTR TCA 90 bp | CCATTTAACAAGCATATAACTCCTACAGTAGTATTCACCAGCACAGCTACTCCAGATCATAGTTTGTCCTaGACCATCATGAGTCAGACA | + |
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Preference number: 2 (lower is better) Translates to: PFNKHITPTVVFTSTATPDHSLS*TIMSQT Trigger: TGTCTGACTCATGATGGTTCAGGACAAACTATGATC...TGGAGTAGCTGTGCTGGTGAATACTACTGTAGGAGTTATATGCTTGTTAAATGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060369.4 ENSMUST00000160300.2 |
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| 3UTR-3UTR CCA 90 bp | TGTGTAGTAAAGATAAGACAGACACTTATAACTTACATGGTGTCTGCCCGGCATGTAGGAATGCATGAGTaGGGATTATCGATTAGCATG | + |
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Preference number: 2 (lower is better) Translates to: CVVKIRQTLITYMVSARHVGMHE*GLSISM Trigger: CATGCTAATCGATAATCCCCACTCATGCATTCCTAC...ATGCCGGGCAGACACCATGTAAGTTATAAGTGTCTGTCTTATCTTTACTACACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060369.4 ENSMUST00000160300.2 |
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| 3UTR-3UTR CCA 90 bp | CCATTTAACAAGCATATAACTCCTACAGTAGTATTCACCAGCACAGCTACTCCAGTAGGAATGCATGAGTaGGGATTATCGATTAGCATG | + |
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Preference number: 2 (lower is better) Translates to: PFNKHITPTVVFTSTATPVGMHE*GLSISM Trigger: CATGCTAATCGATAATCCCCACTCATGCATTCCTAC...TGGAGTAGCTGTGCTGGTGAATACTACTGTAGGAGTTATATGCTTGTTAAATGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060369.4 ENSMUST00000160300.2 |
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| 3UTR-3UTR CCA 90 bp | TGTGTAGTAAAGATAAGACAGACACTTATAACTTACATGGTGTCTGCCCGGCATGTGTCTACTGTATGCTaGGAAAAAGCTACTACACTG | + |
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Preference number: 2 (lower is better) Translates to: CVVKIRQTLITYMVSARHVSTVC*EKATTL Trigger: CAGTGTAGTAGCTTTTTCCCAGCATACAGTAGACAC...ATGCCGGGCAGACACCATGTAAGTTATAAGTGTCTGTCTTATCTTTACTACACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060369.4 ENSMUST00000160300.2 |
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| 3UTR-3UTR TCA 90 bp | ATTCGTGACAGCATGTCTTCAGATGAGACTCTGAGATCTATGGTGATTTACAACCTGACTGTGCAGAAATaGCATCAATTGTTTTCCACT | + |
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Preference number: 2 (lower is better) Translates to: IRDSMSSDETLRSMVIYNLTVQK*HQLFST Trigger: AGTGGAAAACAATTGATGTCATTTCTGCACAGTCAG...GTTGTAAATCACCATAGATCTCAGAGTCTCATCTGAAGACATGCTGTCACGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060369.4 ENSMUST00000160300.2 |
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| 3UTR GCA 72 bp | GAACTTGTGTTAAGCAGCCTTAGTTGGTATCAGCATTaGAAAGGTCCGGTGATAGGCAAGATAAGCTGTCCG | + |
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Preference number: 3 (lower is better) Translates to: ELVLSSLSWYQH*KGPVIGKISCP Trigger: CGGACAGCTTATCTTGCCTATCACCGGACCTTTGCAATGCTGATACCAACTAAGGCTGCTTAACACAAGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060369.4 ENSMUST00000160300.2 |
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| 3UTR TCA 72 bp | AAAGCTCTCTCACAGGGAACCATGATAGATGTGAGCTaGAATGTGCAAGAATGGATGCTCATGGGCCTCTAT | + |
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Preference number: 3 (lower is better) Translates to: KALSQGTMIDVS*NVQEWMLMGLY Trigger: ATAGAGGCCCATGAGCATCCATTCTTGCACATTTCAGCTCACATCTATCATGGTTCCCTGTGAGAGAGCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060369.4 ENSMUST00000160300.2 |
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| 3UTR TCA 72 bp | TCCCTCCATAGAAAGAAAAGCCACCCTGTATCACCTTaGATGTGTCTACTGTATGCTGGGAAAAAGCTACTA | + |
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Preference number: 3 (lower is better) Translates to: SLHRKKSHPVSP*MCLLYAGKKLL Trigger: TAGTAGCTTTTTCCCAGCATACAGTAGACACATTCAAGGTGATACAGGGTGGCTTTTCTTTCTATGGAGGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060369.4 ENSMUST00000160300.2 |
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| 3UTR GCA 72 bp | AAAGATAAGACAGACACTTATAACTTACATGGTGTCTaGCCGGCATTTCCCTTCTCAAATAATGATCAGAAC | + |
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Preference number: 3 (lower is better) Translates to: KDKTDTYNLHGV*PAFPFSNNDQN Trigger: GTTCTGATCATTATTTGAGAAGGGAAATGCCGGGCAGACACCATGTAAGTTATAAGTGTCTGTCTTATCTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060369.4 ENSMUST00000160300.2 |
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| CDS-3UTR CCA 90 bp | AACAAGAGCAGCAAGGTAGACACATTCCAGGCAACAGATGTGACCTTCTTCCTTCAATGGGCCGTCTTTTaGCCCTGGGCCGAGGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: NKSSKVDTFQATDVTFFLQWAVF*PWAEAP Trigger: AGGAGCCTCGGCCCAGGGCCAAAAGACGGCCCATTG...AAGGAAGAAGGTCACATCTGTTGCCTGGAATGTGTCTACCTTGCTGCTCTTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060369.4 ENSMUST00000160300.2 |
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| CDS-3UTR CCA 90 bp | TCATGGGCCTCTATTCGTGACAGCATGTCTTCAGATGAGACTCTGAGATCTATGGCCGTCTTTTGGCCCTaGGCCGAGGCTCCTGAAGAT | + |
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Preference number: 4 (lower is better) Translates to: SWASIRDSMSSDETLRSMAVFWP*AEAPED Trigger: ATCTTCAGGAGCCTCGGCCCAGGGCCAAAAGACGGC...CATAGATCTCAGAGTCTCATCTGAAGACATGCTGTCACGAATAGAGGCCCATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060369.4 ENSMUST00000160300.2 |
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| CDS-3UTR TCA 90 bp | TCATGGGCCTCTATTCGTGACAGCATGTCTTCAGATGAGACTCTGAGATCTATGTTAGGTTGGCACACGTaGCCAAGTAGACGGTGGGCT | + |
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Preference number: 4 (lower is better) Translates to: SWASIRDSMSSDETLRSMLGWHT*PSRRWA Trigger: AGCCCACCGTCTACTTGGTCACGTGTGCCAACCTAA...CATAGATCTCAGAGTCTCATCTGAAGACATGCTGTCACGAATAGAGGCCCATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060369.4 ENSMUST00000160300.2 |
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| CDS-3UTR CCA 90 bp | TCATGGGCCTCTATTCGTGACAGCATGTCTTCAGATGAGACTCTGAGATCTATGGCTCCTGAAGATCTGTaGAGTTCCTCAGCCAGTCCC | + |
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Preference number: 4 (lower is better) Translates to: SWASIRDSMSSDETLRSMAPEDL*SSSASP Trigger: GGGACTGGCTGAGGAACTCCACAGATCTTCAGGAGC...CATAGATCTCAGAGTCTCATCTGAAGACATGCTGTCACGAATAGAGGCCCATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060369.4 ENSMUST00000160300.2 |
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| CDS-3UTR CCA 90 bp | CCATTTAACAAGCATATAACTCCTACAGTAGTATTCACCAGCACAGCTACTCCACAATGGGCCGTCTTTTaGCCCTGGGCCGAGGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: PFNKHITPTVVFTSTATPQWAVF*PWAEAP Trigger: AGGAGCCTCGGCCCAGGGCCAAAAGACGGCCCATTG...TGGAGTAGCTGTGCTGGTGAATACTACTGTAGGAGTTATATGCTTGTTAAATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060369.4 ENSMUST00000160300.2 |
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| CDS-3UTR TCA 90 bp | TGCATGAGTGGGGATTATCGATTAGCATGGACTCAAGACCTTAAAAGAGATTTCCTGGGCCGAGGCTCCTaGAGATCTGTGGAGTTCCTC | + |
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Preference number: 4 (lower is better) Translates to: CMSGDYRLAWTQDLKRDFLGRGS*RSVEFL Trigger: GAGGAACTCCACAGATCTTCAGGAGCCTCGGCCCAG...GAAATCTCTTTTAAGGTCTTGAGTCCATGCTAATCGATAATCCCCACTCATGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060369.4 ENSMUST00000160300.2 |
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| CDS-3UTR TCA 90 bp | TGTGTAGTAAAGATAAGACAGACACTTATAACTTACATGGTGTCTGCCCGGCATCTGGGCCGAGGCTCCTaGAGATCTGTGGAGTTCCTC | + |
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Preference number: 4 (lower is better) Translates to: CVVKIRQTLITYMVSARHLGRGS*RSVEFL Trigger: GAGGAACTCCACAGATCTTCAGGAGCCTCGGCCCAG...ATGCCGGGCAGACACCATGTAAGTTATAAGTGTCTGTCTTATCTTTACTACACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060369.4 ENSMUST00000160300.2 |
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| CDS-3UTR TCA 90 bp | AACAAGAGCAGCAAGGTAGACACATTCCAGGCAACAGATGTGACCTTCTTCCTTTTGGGGGCACCAAGCTaGCAGATACATTCCCTTGAC | + |
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Preference number: 4 (lower is better) Translates to: NKSSKVDTFQATDVTFFLLGAPS*QIHSLD Trigger: GTCAAGGGAATGTATCTGTCAGCTTGGTGCCCCCAA...AAGGAAGAAGGTCACATCTGTTGCCTGGAATGTGTCTACCTTGCTGCTCTTGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060369.4 ENSMUST00000160300.2 |
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| CDS-3UTR CCA 90 bp | TGCATGAGTGGGGATTATCGATTAGCATGGACTCAAGACCTTAAAAGAGATTTCGCCGTCTTTTGGCCCTaGGCCGAGGCTCCTGAAGAT | + |
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Preference number: 4 (lower is better) Translates to: CMSGDYRLAWTQDLKRDFAVFWP*AEAPED Trigger: ATCTTCAGGAGCCTCGGCCCAGGGCCAAAAGACGGC...GAAATCTCTTTTAAGGTCTTGAGTCCATGCTAATCGATAATCCCCACTCATGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000060369.4 ENSMUST00000160300.2 |
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| CDS-3UTR TCA 90 bp | TGCATGAGTGGGGATTATCGATTAGCATGGACTCAAGACCTTAAAAGAGATTTCTTAGGTTGGCACACGTaGCCAAGTAGACGGTGGGCT | + |
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Preference number: 4 (lower is better) Translates to: CMSGDYRLAWTQDLKRDFLGWHT*PSRRWA Trigger: AGCCCACCGTCTACTTGGTCACGTGTGCCAACCTAA...GAAATCTCTTTTAAGGTCTTGAGTCCATGCTAATCGATAATCCCCACTCATGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060369.4 ENSMUST00000160300.2 |
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| CDS-3UTR TCA 90 bp | AACAAGAGCAGCAAGGTAGACACATTCCAGGCAACAGATGTGACCTTCTTCCTTCTGGTAACAGGTTTTTaGAGGGTCGTAGTTGCAGAG | + |
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Preference number: 4 (lower is better) Translates to: NKSSKVDTFQATDVTFFLLVTGF*RVVVAE Trigger: CTCTGCAACTACGACCCTTCAAAAACCTGTTACCAG...AAGGAAGAAGGTCACATCTGTTGCCTGGAATGTGTCTACCTTGCTGCTCTTGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060369.4 ENSMUST00000160300.2 |
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| CDS-3UTR GCA 90 bp | AACAAGAGCAGCAAGGTAGACACATTCCAGGCAACAGATGTGACCTTCTTCCTTTTGAAGGGTCGTAGTTaGAGAGTGTGTTCTTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: NKSSKVDTFQATDVTFFLLKGRS*RVCSWW Trigger: CCACCAAGAACACACTCTGCAACTACGACCCTTCAA...AAGGAAGAAGGTCACATCTGTTGCCTGGAATGTGTCTACCTTGCTGCTCTTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060369.4 ENSMUST00000160300.2 |
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| CDS-3UTR TCA 90 bp | TGTGTAGTAAAGATAAGACAGACACTTATAACTTACATGGTGTCTGCCCGGCATTTGGGGGCACCAAGCTaGCAGATACATTCCCTTGAC | + |
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Preference number: 4 (lower is better) Translates to: CVVKIRQTLITYMVSARHLGAPS*QIHSLD Trigger: GTCAAGGGAATGTATCTGTCAGCTTGGTGCCCCCAA...ATGCCGGGCAGACACCATGTAAGTTATAAGTGTCTGTCTTATCTTTACTACACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060369.4 ENSMUST00000160300.2 |
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| CDS-3UTR TCA 90 bp | ATAAGACAGACACTTATAACTTACATGGTGTCTGCCCGGCATTTCCCTTCTCAACTGGTAACAGGTTTTTaGAGGGTCGTAGTTGCAGAG | + |
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Preference number: 4 (lower is better) Translates to: IRQTLITYMVSARHFPSQLVTGF*RVVVAE Trigger: CTCTGCAACTACGACCCTTCAAAAACCTGTTACCAG...TTGAGAAGGGAAATGCCGGGCAGACACCATGTAAGTTATAAGTGTCTGTCTTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060369.4 ENSMUST00000160300.2 |
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| CDS-3UTR GCA 90 bp | ATAAGACAGACACTTATAACTTACATGGTGTCTGCCCGGCATTTCCCTTCTCAAGCTTTAGCGTGGATTTaGTGCTCCCTGACTTCAGTA | + |
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Preference number: 4 (lower is better) Translates to: IRQTLITYMVSARHFPSQALAWI*CSLTSV Trigger: TACTGAAGTCAGGGAGCAGCAAATCCACGCTAAAGC...TTGAGAAGGGAAATGCCGGGCAGACACCATGTAAGTTATAAGTGTCTGTCTTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060369.4 ENSMUST00000160300.2 |
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| CDS-3UTR GCA 90 bp | TGCAAGAATGGATGCTCATGGGCCTCTATTCGTGACAGCATGTCTTCAGATGAGAATCACGGTTTGTTGTaGCAAATCGAATTCCACGAT | + |
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Preference number: 4 (lower is better) Translates to: CKNGCSWASIRDSMSSDENHGLL*QIEFHD Trigger: ATCGTGGAATTCGATTTGGCACAACAAACCGTGATT...CTCATCTGAAGACATGCTGTCACGAATAGAGGCCCATGAGCATCCATTCTTGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060369.4 ENSMUST00000160300.2 |
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| CDS-3UTR CCA 90 bp | TGCATGAGTGGGGATTATCGATTAGCATGGACTCAAGACCTTAAAAGAGATTTCCTCAGAATAAGGTTCTaGGGTGTCATAGCGCAGGTC | + |
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Preference number: 4 (lower is better) Translates to: CMSGDYRLAWTQDLKRDFLRIRF*GVIAQV Trigger: GACCTGCGCTATGACACCCCAGAACCTTATTCTGAG...GAAATCTCTTTTAAGGTCTTGAGTCCATGCTAATCGATAATCCCCACTCATGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060369.4 ENSMUST00000160300.2 |
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| CDS-3UTR CCA 90 bp | ATTCGTGACAGCATGTCTTCAGATGAGACTCTGAGATCTATGGTGATTTACAACCTCAGAATAAGGTTCTaGGGTGTCATAGCGCAGGTC | + |
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Preference number: 4 (lower is better) Translates to: IRDSMSSDETLRSMVIYNLRIRF*GVIAQV Trigger: GACCTGCGCTATGACACCCCAGAACCTTATTCTGAG...GTTGTAAATCACCATAGATCTCAGAGTCTCATCTGAAGACATGCTGTCACGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060369.4 ENSMUST00000160300.2 |
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| CDS-3UTR CCA 90 bp | AGACAGACACTTATAACTTACATGGTGTCTGCCCGGCATTTCCCTTCTCAAATATTCCACGATTTTTGTTaGGGGCACCAAGCTGACAGA | + |
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Preference number: 4 (lower is better) Translates to: RQTLITYMVSARHFPSQIFHDFC*GHQADR Trigger: TCTGTCAGCTTGGTGCCCCCAACAAAAATCGTGGAA...TATTTGAGAAGGGAAATGCCGGGCAGACACCATGTAAGTTATAAGTGTCTGTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060369.4 ENSMUST00000160300.2 |
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| CDS-3UTR TCA 90 bp | CCATTTAACAAGCATATAACTCCTACAGTAGTATTCACCAGCACAGCTACTCCAACAGATACATTCCCTTaGCCAGTGGAGTTATGCCTG | + |
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Preference number: 4 (lower is better) Translates to: PFNKHITPTVVFTSTATPTDTFP*PVELCL Trigger: CAGGCATAACTCCACTGGTCAAGGGAATGTATCTGT...TGGAGTAGCTGTGCTGGTGAATACTACTGTAGGAGTTATATGCTTGTTAAATGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060369.4 ENSMUST00000160300.2 |
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| CDS-3UTR GCA 90 bp | TTTTCCACTAGCATGTGTGCACCAGTCAACAAGAGCAGCAAGGTAGACACATTCAATCACGGTTTGTTGTaGCAAATCGAATTCCACGAT | + |
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Preference number: 4 (lower is better) Translates to: FSTSMCAPVNKSSKVDTFNHGLL*QIEFHD Trigger: ATCGTGGAATTCGATTTGGCACAACAAACCGTGATT...GAATGTGTCTACCTTGCTGCTCTTGTTGACTGGTGCACACATGCTAGTGGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060369.4 ENSMUST00000160300.2 |
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| CDS-3UTR CCA 90 bp | TGTGTAGTAAAGATAAGACAGACACTTATAACTTACATGGTGTCTGCCCGGCATTTCCACGATTTTTGTTaGGGGCACCAAGCTGACAGA | + |
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Preference number: 4 (lower is better) Translates to: CVVKIRQTLITYMVSARHFHDFC*GHQADR Trigger: TCTGTCAGCTTGGTGCCCCCAACAAAAATCGTGGAA...ATGCCGGGCAGACACCATGTAAGTTATAAGTGTCTGTCTTATCTTTACTACACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060369.4 ENSMUST00000160300.2 |
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| CDS-3UTR GCA 90 bp | ATAAGACAGACACTTATAACTTACATGGTGTCTGCCCGGCATTTCCCTTCTCAACTTTCTGTCCATATGTaGTTTAGCGTGGATTTGCTG | + |
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Preference number: 4 (lower is better) Translates to: IRQTLITYMVSARHFPSQLSVHM*FSVDLL Trigger: CAGCAAATCCACGCTAAAGCACATATGGACAGAAAG...TTGAGAAGGGAAATGCCGGGCAGACACCATGTAAGTTATAAGTGTCTGTCTTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060369.4 ENSMUST00000160300.2 |
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| CDS-3UTR CCA 90 bp | ATTCGTGACAGCATGTCTTCAGATGAGACTCTGAGATCTATGGTGATTTACAACATATGTGCTTTAGCGTaGATTTGCTGCTCCCTGACT | + |
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Preference number: 4 (lower is better) Translates to: IRDSMSSDETLRSMVIYNICALA*ICCSLT Trigger: AGTCAGGGAGCAGCAAATCCACGCTAAAGCACATAT...GTTGTAAATCACCATAGATCTCAGAGTCTCATCTGAAGACATGCTGTCACGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060369.4 ENSMUST00000160300.2 |
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| CDS-3UTR CCA 90 bp | TGTGTAGTAAAGATAAGACAGACACTTATAACTTACATGGTGTCTGCCCGGCATATATGTGCTTTAGCGTaGATTTGCTGCTCCCTGACT | + |
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Preference number: 4 (lower is better) Translates to: CVVKIRQTLITYMVSARHICALA*ICCSLT Trigger: AGTCAGGGAGCAGCAAATCCACGCTAAAGCACATAT...ATGCCGGGCAGACACCATGTAAGTTATAAGTGTCTGTCTTATCTTTACTACACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060369.4 ENSMUST00000160300.2 |
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| CDS TCA 90 bp | CCAGTTTTAACAATGGGCCGTCTTTTGGCCCTGGGCCGAGGCTCCTaGAGATCTGTGGAGTTCCTCAGCCAGTCCCAGAGGTCTTGCTCA | + |
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Preference number: 5 (lower is better) Translates to: PVLTMGRLLALGRGS*RSVEFLSQSQRSCS Trigger: TGAGCAAGACCTCTGGGACTGGCTGAGGAACTCCACAGATCTTCAGGAGCCTCGGCCCAGGGCCAAAAGACGGCCCATTGTTAAAACTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060369.4 ENSMUST00000160300.2 |
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| CDS CCA 90 bp | CAATGGGCCGTCTTTTGGCCCTGGGCCGAGGCTCCTGAAGATCTGTaGAGTTCCTCAGCCAGTCCCAGAGGTCTTGCTCAGAATAAGGTT | + |
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Preference number: 5 (lower is better) Translates to: QWAVFWPWAEAPEDL*SSSASPRGLAQNKV Trigger: AACCTTATTCTGAGCAAGACCTCTGGGACTGGCTGAGGAACTCCACAGATCTTCAGGAGCCTCGGCCCAGGGCCAAAAGACGGCCCATTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060369.4 ENSMUST00000160300.2 |
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| CDS-3UTR CAA 90 bp | TGCAAGAATGGATGCTCATGGGCCTCTATTCGTGACAGCATGTCTTCAGATGAGACAATGGGCCGTCTTTaGGCCCTGGGCCGAGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: CKNGCSWASIRDSMSSDETMGRL*ALGRGS Trigger: GGAGCCTCGGCCCAGGGCCAAAAGACGGCCCATTGT...CTCATCTGAAGACATGCTGTCACGAATAGAGGCCCATGAGCATCCATTCTTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060369.4 ENSMUST00000160300.2 |
||
| CDS TCA 90 bp | ACTTCAGTAGTTCCGATTTCCCACCATTTGTTAGGTTGGCACACGTaGCCAAGTAGACGGTGGGCTGCAGGAGGAGAAGAACGTACCAGC | + |
|
Preference number: 5 (lower is better) Translates to: TSVVPISHHLLGWHT*PSRRWAAGGEERTS Trigger: GCTGGTACGTTCTTCTCCTCCTGCAGCCCACCGTCTACTTGGTCACGTGTGCCAACCTAACAAATGGTGGGAAATCGGAACTACTGAAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060369.4 ENSMUST00000160300.2 |
||
| CDS-3UTR CAA 90 bp | ATTCGTGACAGCATGTCTTCAGATGAGACTCTGAGATCTATGGTGATTTACAACACAATGGGCCGTCTTTaGGCCCTGGGCCGAGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: IRDSMSSDETLRSMVIYNTMGRL*ALGRGS Trigger: GGAGCCTCGGCCCAGGGCCAAAAGACGGCCCATTGT...GTTGTAAATCACCATAGATCTCAGAGTCTCATCTGAAGACATGCTGTCACGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060369.4 ENSMUST00000160300.2 |
||
| CDS CCA 90 bp | GGAGTTCCTCAGCCAGTCCCAGAGGTCTTGCTCAGAATAAGGTTCTaGGGTGTCATAGCGCAGGTCCAAATCTGTGTCATTTTCTTTACC | + |
|
Preference number: 5 (lower is better) Translates to: GVPQPVPEVLLRIRF*GVIAQVQICVIFFT Trigger: GGTAAAGAAAATGACACAGATTTGGACCTGCGCTATGACACCCCAGAACCTTATTCTGAGCAAGACCTCTGGGACTGGCTGAGGAACTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060369.4 ENSMUST00000160300.2 |
||
| CDS-3UTR CAA 90 bp | AACAAGAGCAGCAAGGTAGACACATTCCAGGCAACAGATGTGACCTTCTTCCTTCCAGGACACGTGACTTaGGGTCTGCTCCTGGTAACA | + |
|
Preference number: 5 (lower is better) Translates to: NKSSKVDTFQATDVTFFLPGHVT*GLLLVT Trigger: TGTTACCAGGAGCAGACCCAAAGTCACGTGTCCTGG...AAGGAAGAAGGTCACATCTGTTGCCTGGAATGTGTCTACCTTGCTGCTCTTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060369.4 ENSMUST00000160300.2 |
||
| CDS TCA 90 bp | GCGCAGGTCCAAATCTGTGTCATTTTCTTTACCACGGAAAGTCTGTaGGAGGAGCCGACTGATAGACAAGTCTTTGCTGCTTTCTGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: AQVQICVIFFTTESL*EEPTDRQVFAAFCP Trigger: TGGACAGAAAGCAGCAAAGACTTGTCTATCAGTCGGCTCCTCTCACAGACTTTCCGTGGTAAAGAAAATGACACAGATTTGGACCTGCGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060369.4 ENSMUST00000160300.2 |
||
| CDS GCA 90 bp | AGGAGCCGACTGATAGACAAGTCTTTGCTGCTTTCTGTCCATATGTaGTTTAGCGTGGATTTGCTGCTCCCTGACTTCAGTAGTTCCGAT | + |
|
Preference number: 5 (lower is better) Translates to: RSRLIDKSLLLSVHM*FSVDLLLPDFSSSD Trigger: ATCGGAACTACTGAAGTCAGGGAGCAGCAAATCCACGCTAAAGCACATATGGACAGAAAGCAGCAAAGACTTGTCTATCAGTCGGCTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060369.4 ENSMUST00000160300.2 |
||
| CDS-3UTR CAA 90 bp | TCATGGGCCTCTATTCGTGACAGCATGTCTTCAGATGAGACTCTGAGATCTATGTTGCAGAGTGTGTTCTaGGTGGCCTTGTCAACCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SWASIRDSMSSDETLRSMLQSVF*VALSTF Trigger: GAAGGTTGACAAGGCCACCAAGAACACACTCTGCAA...CATAGATCTCAGAGTCTCATCTGAAGACATGCTGTCACGAATAGAGGCCCATGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060369.4 ENSMUST00000160300.2 |
||
| CDS-3UTR CAA 90 bp | TCATGGGCCTCTATTCGTGACAGCATGTCTTCAGATGAGACTCTGAGATCTATGCCTGGTAACAGGTTTTaGAAGGGTCGTAGTTGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: SWASIRDSMSSDETLRSMPGNRF*KGRSCR Trigger: TCTGCAACTACGACCCTTCAAAAACCTGTTACCAGG...CATAGATCTCAGAGTCTCATCTGAAGACATGCTGTCACGAATAGAGGCCCATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060369.4 ENSMUST00000160300.2 |
||
| CDS-3UTR CAA 90 bp | CCATTTAACAAGCATATAACTCCTACAGTAGTATTCACCAGCACAGCTACTCCACCAGGACACGTGACTTaGGGTCTGCTCCTGGTAACA | + |
|
Preference number: 5 (lower is better) Translates to: PFNKHITPTVVFTSTATPPGHVT*GLLLVT Trigger: TGTTACCAGGAGCAGACCCAAAGTCACGTGTCCTGG...TGGAGTAGCTGTGCTGGTGAATACTACTGTAGGAGTTATATGCTTGTTAAATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060369.4 ENSMUST00000160300.2 |
||
| CDS CCA 90 bp | ATCAATCACGGTTTGTTGTGCCAAATCGAATTCCACGATTTTTGTTaGGGGCACCAAGCTGACAGATACATTCCCTTGACCAGTGGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: INHGLLCQIEFHDFC*GHQADRYIPLTSGV Trigger: AACTCCACTGGTCAAGGGAATGTATCTGTCAGCTTGGTGCCCCCAACAAAAATCGTGGAATTCGATTTGGCACAACAAACCGTGATTGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060369.4 ENSMUST00000160300.2 |
||
| CDS-3UTR CAA 90 bp | AGACAGACACTTATAACTTACATGGTGTCTGCCCGGCATTTCCCTTCTCAAATATTGCAGAGTGTGTTCTaGGTGGCCTTGTCAACCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RQTLITYMVSARHFPSQILQSVF*VALSTF Trigger: GAAGGTTGACAAGGCCACCAAGAACACACTCTGCAA...TATTTGAGAAGGGAAATGCCGGGCAGACACCATGTAAGTTATAAGTGTCTGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060369.4 ENSMUST00000160300.2 |
||
| CDS GCA 90 bp | ACAGTTGAAGGACTTGGAATCTTTAGCATCAATCACGGTTTGTTGTaGCAAATCGAATTCCACGATTTTTGTTGGGGGCACCAAGCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: TVEGLGIFSINHGLL*QIEFHDFCWGHQAD Trigger: GTCAGCTTGGTGCCCCCAACAAAAATCGTGGAATTCGATTTGGCACAACAAACCGTGATTGATGCTAAAGATTCCAAGTCCTTCAACTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000060369.4 ENSMUST00000160300.2 |
||
| CDS-3UTR CAA 90 bp | TTTTCCACTAGCATGTGTGCACCAGTCAACAAGAGCAGCAAGGTAGACACATTCCTGATAGACAAGTCTTaGCTGCTTTCTGTCCATATG | + |
|
Preference number: 5 (lower is better) Translates to: FSTSMCAPVNKSSKVDTFLIDKS*LLSVHM Trigger: CATATGGACAGAAAGCAGCAAAGACTTGTCTATCAG...GAATGTGTCTACCTTGCTGCTCTTGTTGACTGGTGCACACATGCTAGTGGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060369.4 ENSMUST00000160300.2 |
||
| CDS-3UTR CAA 90 bp | AACAAGAGCAGCAAGGTAGACACATTCCAGGCAACAGATGTGACCTTCTTCCTTCTGATAGACAAGTCTTaGCTGCTTTCTGTCCATATG | + |
|
Preference number: 5 (lower is better) Translates to: NKSSKVDTFQATDVTFFLLIDKS*LLSVHM Trigger: CATATGGACAGAAAGCAGCAAAGACTTGTCTATCAG...AAGGAAGAAGGTCACATCTGTTGCCTGGAATGTGTCTACCTTGCTGCTCTTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060369.4 ENSMUST00000160300.2 |
||
| CDS-3UTR CAA 90 bp | AGACAGACACTTATAACTTACATGGTGTCTGCCCGGCATTTCCCTTCTCAAATAGACAGATACATTCCCTaGACCAGTGGAGTTATGCCT | + |
|
Preference number: 5 (lower is better) Translates to: RQTLITYMVSARHFPSQIDRYIP*TSGVMP Trigger: AGGCATAACTCCACTGGTCAAGGGAATGTATCTGTC...TATTTGAGAAGGGAAATGCCGGGCAGACACCATGTAAGTTATAAGTGTCTGTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060369.4 ENSMUST00000160300.2 |
||
| CDS-3UTR CAA 90 bp | TCATGGGCCTCTATTCGTGACAGCATGTCTTCAGATGAGACTCTGAGATCTATGATCAATCACGGTTTGTaGTGCCAAATCGAATTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: SWASIRDSMSSDETLRSMINHGL*CQIEFH Trigger: GTGGAATTCGATTTGGCACAACAAACCGTGATTGAT...CATAGATCTCAGAGTCTCATCTGAAGACATGCTGTCACGAATAGAGGCCCATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060369.4 ENSMUST00000160300.2 |
||
| CDS-3UTR CAA 90 bp | ATTCGTGACAGCATGTCTTCAGATGAGACTCTGAGATCTATGGTGATTTACAACGTGTTCTTGGTGGCCTaGTCAACCTTCTCATACTCA | + |
|
Preference number: 5 (lower is better) Translates to: IRDSMSSDETLRSMVIYNVFLVA*STFSYS Trigger: TGAGTATGAGAAGGTTGACAAGGCCACCAAGAACAC...GTTGTAAATCACCATAGATCTCAGAGTCTCATCTGAAGACATGCTGTCACGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060369.4 ENSMUST00000160300.2 |
||
| CDS-3UTR CAA 90 bp | TGCATGAGTGGGGATTATCGATTAGCATGGACTCAAGACCTTAAAAGAGATTTCGTGTTCTTGGTGGCCTaGTCAACCTTCTCATACTCA | + |
|
Preference number: 5 (lower is better) Translates to: CMSGDYRLAWTQDLKRDFVFLVA*STFSYS Trigger: TGAGTATGAGAAGGTTGACAAGGCCACCAAGAACAC...GAAATCTCTTTTAAGGTCTTGAGTCCATGCTAATCGATAATCCCCACTCATGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060369.4 ENSMUST00000160300.2 |
||
| CDS-3UTR CAA 90 bp | CCATTTAACAAGCATATAACTCCTACAGTAGTATTCACCAGCACAGCTACTCCACCTGGTAACAGGTTTTaGAAGGGTCGTAGTTGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: PFNKHITPTVVFTSTATPPGNRF*KGRSCR Trigger: TCTGCAACTACGACCCTTCAAAAACCTGTTACCAGG...TGGAGTAGCTGTGCTGGTGAATACTACTGTAGGAGTTATATGCTTGTTAAATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060369.4 ENSMUST00000160300.2 |
||
| CDS-3UTR CAA 90 bp | ATAAGACAGACACTTATAACTTACATGGTGTCTGCCCGGCATTTCCCTTCTCAAATCAATCACGGTTTGTaGTGCCAAATCGAATTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: IRQTLITYMVSARHFPSQINHGL*CQIEFH Trigger: GTGGAATTCGATTTGGCACAACAAACCGTGATTGAT...TTGAGAAGGGAAATGCCGGGCAGACACCATGTAAGTTATAAGTGTCTGTCTTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060369.4 ENSMUST00000160300.2 |
||
| CDS TCA 72 bp | ACAATGGGCCGTCTTTTGGCCCTGGGCCGAGGCTCCTaGAGATCTGTGGAGTTCCTCAGCCAGTCCCAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: TMGRLLALGRGS*RSVEFLSQSQR Trigger: CCTCTGGGACTGGCTGAGGAACTCCACAGATCTTCAGGAGCCTCGGCCCAGGGCCAAAAGACGGCCCATTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060369.4 ENSMUST00000160300.2 |
||
| CDS CCA 72 bp | GTCTTTTGGCCCTGGGCCGAGGCTCCTGAAGATCTGTaGAGTTCCTCAGCCAGTCCCAGAGGTCTTGCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: VFWPWAEAPEDL*SSSASPRGLAQ Trigger: CTGAGCAAGACCTCTGGGACTGGCTGAGGAACTCCACAGATCTTCAGGAGCCTCGGCCCAGGGCCAAAAGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060369.4 ENSMUST00000160300.2 |
||
| CDS TCA 72 bp | GTTCCGATTTCCCACCATTTGTTAGGTTGGCACACGTaGCCAAGTAGACGGTGGGCTGCAGGAGGAGAAGAA | + |
|
Preference number: 6 (lower is better) Translates to: VPISHHLLGWHT*PSRRWAAGGEE Trigger: TTCTTCTCCTCCTGCAGCCCACCGTCTACTTGGTCACGTGTGCCAACCTAACAAATGGTGGGAAATCGGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060369.4 ENSMUST00000160300.2 |
||
| CDS CCA 72 bp | CAGCCAGTCCCAGAGGTCTTGCTCAGAATAAGGTTCTaGGGTGTCATAGCGCAGGTCCAAATCTGTGTCATT | + |
|
Preference number: 6 (lower is better) Translates to: QPVPEVLLRIRF*GVIAQVQICVI Trigger: AATGACACAGATTTGGACCTGCGCTATGACACCCCAGAACCTTATTCTGAGCAAGACCTCTGGGACTGGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060369.4 ENSMUST00000160300.2 |
||
| CDS GCA 72 bp | TGCTGCTTTCTGTCCATATGTGCTTTAGCGTGGATTTaGTGCTCCCTGACTTCAGTAGTTCCGATTTCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: CCFLSICALAWI*CSLTSVVPISH Trigger: GTGGGAAATCGGAACTACTGAAGTCAGGGAGCAGCAAATCCACGCTAAAGCACATATGGACAGAAAGCAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060369.4 ENSMUST00000160300.2 |
||
| CDS GCA 72 bp | TCTGCTCCTGGTAACAGGTTTTTGAAGGGTCGTAGTTaGAGAGTGTGTTCTTGGTGGCCTTGTCAACCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: SAPGNRFLKGRS*RVCSWWPCQPS Trigger: AGAAGGTTGACAAGGCCACCAAGAACACACTCTGCAACTACGACCCTTCAAAAACCTGTTACCAGGAGCAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060369.4 ENSMUST00000160300.2 |
||
| CDS CAA 90 bp | TTACCACGGAAAGTCTGTGAGAGGAGCCGACTGATAGACAAGTCTTaGCTGCTTTCTGTCCATATGTGCTTTAGCGTGGATTTGCTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: LPRKVCERSRLIDKS*LLSVHMCFSVDLLL Trigger: GAGCAGCAAATCCACGCTAAAGCACATATGGACAGAAAGCAGCAAAGACTTGTCTATCAGTCGGCTCCTCTCACAGACTTTCCGTGGTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060369.4 ENSMUST00000160300.2 |
||
| CDS TCA 72 bp | AATCGAATTCCACGATTTTTGTTGGGGGCACCAAGCTaGCAGATACATTCCCTTGACCAGTGGAGTTATGCC | + |
|
Preference number: 6 (lower is better) Translates to: NRIPRFLLGAPS*QIHSLDQWSYA Trigger: GGCATAACTCCACTGGTCAAGGGAATGTATCTGTCAGCTTGGTGCCCCCAACAAAAATCGTGGAATTCGATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000060369.4 ENSMUST00000160300.2 |
||
| CDS GCA 72 bp | TGCTTTCTGTCCATATGTGCTTTAGCGTGGATTTGCTaGTCCCTGACTTCAGTAGTTCCGATTTCCCACCAT | + |
|
Preference number: 6 (lower is better) Translates to: CFLSICALAWIC*SLTSVVPISHH Trigger: ATGGTGGGAAATCGGAACTACTGAAGTCAGGGAGCAGCAAATCCACGCTAAAGCACATATGGACAGAAAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060369.4 ENSMUST00000160300.2 |
||
| CDS CCA 72 bp | GGTTTGTTGTGCCAAATCGAATTCCACGATTTTTGTTaGGGGCACCAAGCTGACAGATACATTCCCTTGACC | + |
|
Preference number: 6 (lower is better) Translates to: GLLCQIEFHDFC*GHQADRYIPLT Trigger: GGTCAAGGGAATGTATCTGTCAGCTTGGTGCCCCCAACAAAAATCGTGGAATTCGATTTGGCACAACAAACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060369.4 ENSMUST00000160300.2 |
||
| CDS CAA 72 bp | TTGCTGCTTTCTGTCCATATGTGCTTTAGCGTGGATTaGCTGCTCCCTGACTTCAGTAGTTCCGATTTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: LLLSVHMCFSVD*LLPDFSSSDFP Trigger: TGGGAAATCGGAACTACTGAAGTCAGGGAGCAGCAAATCCACGCTAAAGCACATATGGACAGAAAGCAGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060369.4 ENSMUST00000160300.2 |
||
| CDS CAA 90 bp | GCGACAGTTGAAGGACTTGGAATCTTTAGCATCAATCACGGTTTGTaGTGCCAAATCGAATTCCACGATTTTTGTTGGGGGCACCAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: ATVEGLGIFSINHGL*CQIEFHDFCWGHQA Trigger: AGCTTGGTGCCCCCAACAAAAATCGTGGAATTCGATTTGGCACAACAAACCGTGATTGATGCTAAAGATTCCAAGTCCTTCAACTGTCGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000060369.4 ENSMUST00000160300.2 |
||
| CDS GCA 72 bp | CTGATAGACAAGTCTTTGCTGCTTTCTGTCCATATGTaGTTTAGCGTGGATTTGCTGCTCCCTGACTTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: LIDKSLLLSVHM*FSVDLLLPDFS Trigger: ACTGAAGTCAGGGAGCAGCAAATCCACGCTAAAGCACATATGGACAGAAAGCAGCAAAGACTTGTCTATCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060369.4 ENSMUST00000160300.2 |
||
| CDS CAA 72 bp | AAAGTCTGTGAGAGGAGCCGACTGATAGACAAGTCTTaGCTGCTTTCTGTCCATATGTGCTTTAGCGTGGAT | + |
|
Preference number: 6 (lower is better) Translates to: KVCERSRLIDKS*LLSVHMCFSVD Trigger: ATCCACGCTAAAGCACATATGGACAGAAAGCAGCAAAGACTTGTCTATCAGTCGGCTCCTCTCACAGACTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060369.4 ENSMUST00000160300.2 |
||
| CDS TCA 72 bp | CAAATCTGTGTCATTTTCTTTACCACGGAAAGTCTGTaGGAGGAGCCGACTGATAGACAAGTCTTTGCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: QICVIFFTTESL*EEPTDRQVFAA Trigger: AGCAGCAAAGACTTGTCTATCAGTCGGCTCCTCTCACAGACTTTCCGTGGTAAAGAAAATGACACAGATTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060369.4 ENSMUST00000160300.2 |
||
| CDS TCA 72 bp | TTTGTTGGGGGCACCAAGCTGACAGATACATTCCCTTaGCCAGTGGAGTTATGCCTGAAATATACACTAAAG | + |
|
Preference number: 6 (lower is better) Translates to: FVGGTKLTDTFP*PVELCLKYTLK Trigger: CTTTAGTGTATATTTCAGGCATAACTCCACTGGTCAAGGGAATGTATCTGTCAGCTTGGTGCCCCCAACAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060369.4 ENSMUST00000160300.2 |
||
| CDS GCA 72 bp | GGACTTGGAATCTTTAGCATCAATCACGGTTTGTTGTaGCAAATCGAATTCCACGATTTTTGTTGGGGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: GLGIFSINHGLL*QIEFHDFCWGH Trigger: GTGCCCCCAACAAAAATCGTGGAATTCGATTTGGCACAACAAACCGTGATTGATGCTAAAGATTCCAAGTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000060369.4 ENSMUST00000160300.2 |
||
| CDS CAA 90 bp | AATGCGACAGTTGAAGGACTTGGAATCTTTAGCATCAATCACGGTTaGTTGTGCCAAATCGAATTCCACGATTTTTGTTGGGGGCACCAA | + |
|
Preference number: 6 (lower is better) Translates to: NATVEGLGIFSINHG*LCQIEFHDFCWGHQ Trigger: TTGGTGCCCCCAACAAAAATCGTGGAATTCGATTTGGCACAACAAACCGTGATTGATGCTAAAGATTCCAAGTCCTTCAACTGTCGCATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000060369.4 ENSMUST00000160300.2 |
||
| CDS CAA 72 bp | TTTTGTTGGGGGCACCAAGCTGACAGATACATTCCCTaGACCAGTGGAGTTATGCCTGAAATATACACTAAA | + |
|
Preference number: 6 (lower is better) Translates to: FCWGHQADRYIP*TSGVMPEIYTK Trigger: TTTAGTGTATATTTCAGGCATAACTCCACTGGTCAAGGGAATGTATCTGTCAGCTTGGTGCCCCCAACAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060369.4 ENSMUST00000160300.2 |
||
| CDS CAA 72 bp | GAAGGACTTGGAATCTTTAGCATCAATCACGGTTTGTaGTGCCAAATCGAATTCCACGATTTTTGTTGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: EGLGIFSINHGL*CQIEFHDFCWG Trigger: CCCCCAACAAAAATCGTGGAATTCGATTTGGCACAACAAACCGTGATTGATGCTAAAGATTCCAAGTCCTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060369.4 ENSMUST00000160300.2 |
||
| CDS CAA 72 bp | GTTGAAGGACTTGGAATCTTTAGCATCAATCACGGTTaGTTGTGCCAAATCGAATTCCACGATTTTTGTTGG | + |
|
Preference number: 6 (lower is better) Translates to: VEGLGIFSINHG*LCQIEFHDFCW Trigger: CCAACAAAAATCGTGGAATTCGATTTGGCACAACAAACCGTGATTGATGCTAAAGATTCCAAGTCCTTCAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060369.4 ENSMUST00000160300.2 |
||