Pregenerated sensors for NXPE5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047592Ensembl transcript IDs: ENSMUST00000110929.9, ENSMUST00000159798.8, ENSMUST00000159964.2, ENSMUST00000161047.8, ENSMUST00000162519.2
Found 207 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CACCACCTCACCAAACCACTCCACTCCCTGGGGCCTCCAGTCTCTTaGGGGTTAGGTGAATCTTCTCTGACAACCCAGACCTGGCCGTCC | + |
|
Preference number: 1 (lower is better) Translates to: HHLTKPLHSLGPPVS*GLGESSLTTQTWPS Trigger: GGACGGCCAGGTCTGGGTTGTCAGAGAAGATTCACCTAACCCTCAAGAGACTGGAGGCCCCAGGGAGTGGAGTGGTTTGGTGAGGTGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000159798.8 ENSMUST00000159964.2 |
||
| 3UTR TCA 90 bp | CAAACCACTCCACTCCCTGGGGCCTCCAGTCTCTTGAGGGTTAGGTaGATCTTCTCTGACAACCCAGACCTGGCCGTCCTCTGCTGTATA | + |
|
Preference number: 1 (lower is better) Translates to: QTTPLPGASSLLRVR*IFSDNPDLAVLCCI Trigger: TATACAGCAGAGGACGGCCAGGTCTGGGTTGTCAGAGAAGATTCACCTAACCCTCAAGAGACTGGAGGCCCCAGGGAGTGGAGTGGTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159798.8 ENSMUST00000159964.2 |
||
| 3UTR GCA 90 bp | TCACTCTGTGGACCAGGCAGAAACTTTCAGAGATACTCCTGCCTCTaGCTCCCTAGTGCTGGGATTGCAGGTATGTGGCTCCACCATCCA | + |
|
Preference number: 1 (lower is better) Translates to: SLCGPGRNFQRYSCL*LPSAGIAGMWLHHP Trigger: TGGATGGTGGAGCCACATACCTGCAATCCCAGCACTAGGGAGGCAGAGGCAGGAGTATCTCTGAAAGTTTCTGCCTGGTCCACAGAGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159798.8 ENSMUST00000159964.2 |
||
| 3UTR CCA 90 bp | CTGCGTGCAGGTGCCCATGATGGCCAGAAGAGGTCATTGTTTCCATaGGAACAAGAGTTACAGGGAGTTTTAAGCTACTCATCTAACTGG | + |
|
Preference number: 1 (lower is better) Translates to: LRAGAHDGQKRSLFP*EQELQGVLSYSSNW Trigger: CCAGTTAGATGAGTAGCTTAAAACTCCCTGTAACTCTTGTTCCCATGGAAACAATGACCTCTTCTGGCCATCATGGGCACCTGCACGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159964.2 |
||
| 3UTR TCA 90 bp | TTTGAGTATCTGTGTGAGTATATGCCATCTGCGTGCAGGTGCCCATaGTGGCCAGAAGAGGTCATTGTTTCCATGGGAACAAGAGTTACA | + |
|
Preference number: 1 (lower is better) Translates to: FEYLCEYMPSACRCP*WPEEVIVSMGTRVT Trigger: TGTAACTCTTGTTCCCATGGAAACAATGACCTCTTCTGGCCATCATGGGCACCTGCACGCAGATGGCATATACTCACACAGATACTCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159964.2 |
||
| 3UTR GCA 90 bp | CCAGAGCTGTGGACACAAAGAAAAAGATGTTTGAAACTTTCTGGCTaGCAGCCTAGCTCTAGAGTCCAGAGACCCTTTCTCAAAGAACAA | + |
|
Preference number: 1 (lower is better) Translates to: PELWTQRKRCLKLSG*QPSSRVQRPFLKEQ Trigger: TTGTTCTTTGAGAAAGGGTCTCTGGACTCTAGAGCTAGGCTGGCAGCCAGAAAGTTTCAAACATCTTTTTCTTTGTGTCCACAGCTCTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000159798.8 ENSMUST00000159964.2 |
||
| 3UTR TCA 90 bp | ACACGAGGGTTTGAGTTTGAGTTCCCAGCAACACATTTAAAGATCTaGTATGAACTTTGTGCCTGTAACTCCAGAGCTGTGGACACAAAG | + |
|
Preference number: 1 (lower is better) Translates to: TRGFEFEFPATHLKI*YELCACNSRAVDTK Trigger: CTTTGTGTCCACAGCTCTGGAGTTACAGGCACAAAGTTCATATCAGATCTTTAAATGTGTTGCTGGGAACTCAAACTCAAACCCTCGTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159798.8 ENSMUST00000159964.2 |
||
| 3UTR GCA 90 bp | GGATGCCCTAAGATCTTATATTCAGAAAGGGATTGTGTACATATATaGAAAACATGGTCTCCTAATATAAAACTAGATTGTCCATGTGGT | + |
|
Preference number: 1 (lower is better) Translates to: GCPKILYSERDCVHI*KTWSPNIKLDCPCG Trigger: ACCACATGGACAATCTAGTTTTATATTAGGAGACCATGTTTTGCATATATGTACACAATCCCTTTCTGAATATAAGATCTTAGGGCATCC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000159798.8 ENSMUST00000159964.2 |
||
| 3UTR-3UTR TCA 90 bp | AGCCATCTCTTCAGCCTCCATGCCTGCAGGCAAGCTTGGACATTGGTAATTTGGCTTTGTAGACCAGGCTaGCCTCGAACTCAGAATGGT | + |
|
Preference number: 2 (lower is better) Translates to: SHLFSLHACRQAWTLVIWLCRPG*PRTQNG Trigger: ACCATTCTGAGTTCGAGGTCAGCCTGGTCTACAAAG...CCAAATTACCAATGTCCAAGCTTGCCTGCAGGCATGGAGGCTGAAGAGATGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159964.2 |
||
| 3UTR-3UTR GCA 90 bp | AGCCTAGCTCTAGAGTCCAGAGACCCTTTCTCAAAGAACAAAGGTGACAGTGATCAGGCTCTCCATCCATaGAGCCTCAGATCCCTCAGG | + |
|
Preference number: 2 (lower is better) Translates to: SLALESRDPFSKNKGDSDQALHP*SLRSLR Trigger: CCTGAGGGATCTGAGGCTGCATGGATGGAGAGCCTG...ATCACTGTCACCTTTGTTCTTTGAGAAAGGGTCTCTGGACTCTAGAGCTAGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159798.8 ENSMUST00000159964.2 |
||
| 3UTR-3UTR TCA 90 bp | CAGCACCAAGCCATCTCTTCAGCCTCCATGCCTGCAGGCAAGCTTGGACATTGGAAAGAAAAAGATGTTTaGAACTTTCTGGCTGCCAGC | + |
|
Preference number: 2 (lower is better) Translates to: QHQAISSASMPAGKLGHWKEKDV*NFLAAS Trigger: GCTGGCAGCCAGAAAGTTTCAAACATCTTTTTCTTT...CCAATGTCCAAGCTTGCCTGCAGGCATGGAGGCTGAAGAGATGGCTTGGTGCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159964.2 |
||
| 3UTR-3UTR GCA 90 bp | CCATGGGAACAAGAGTTACAGGGAGTTTTAAGCTACTCATCTAACTGGGGTGCTAGATACTCCTGCCTCTaGCTCCCTAGTGCTGGGATT | + |
|
Preference number: 2 (lower is better) Translates to: PWEQELQGVLSYSSNWGARYSCL*LPSAGI Trigger: AATCCCAGCACTAGGGAGGCAGAGGCAGGAGTATCT...AGCACCCCAGTTAGATGAGTAGCTTAAAACTCCCTGTAACTCTTGTTCCCATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159964.2 |
||
| 3UTR-3UTR CCA 90 bp | AGCCATCTCTTCAGCCTCCATGCCTGCAGGCAAGCTTGGACATTGGTAATTTGGTTGGAACTCACTCTGTaGACCAGGCAGAAACTTTCA | + |
|
Preference number: 2 (lower is better) Translates to: SHLFSLHACRQAWTLVIWLELTL*TRQKLS Trigger: TGAAAGTTTCTGCCTGGTCCACAGAGTGAGTTCCAA...CCAAATTACCAATGTCCAAGCTTGCCTGCAGGCATGGAGGCTGAAGAGATGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159964.2 |
||
| 3UTR CAA 90 bp | TTTGTGCCTGTAACTCCAGAGCTGTGGACACAAAGAAAAAGATGTTaGAAACTTTCTGGCTGCCAGCCTAGCTCTAGAGTCCAGAGACCC | + |
|
Preference number: 2 (lower is better) Translates to: FVPVTPELWTQRKRC*KLSGCQPSSRVQRP Trigger: GGGTCTCTGGACTCTAGAGCTAGGCTGGCAGCCAGAAAGTTTCAAACATCTTTTTCTTTGTGTCCACAGCTCTGGAGTTACAGGCACAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000159798.8 ENSMUST00000159964.2 |
||
| 3UTR CAA 90 bp | ATATGCCATCTGCGTGCAGGTGCCCATGATGGCCAGAAGAGGTCATaGTTTCCATGGGAACAAGAGTTACAGGGAGTTTTAAGCTACTCA | + |
|
Preference number: 2 (lower is better) Translates to: ICHLRAGAHDGQKRS*FPWEQELQGVLSYS Trigger: TGAGTAGCTTAAAACTCCCTGTAACTCTTGTTCCCATGGAAACAATGACCTCTTCTGGCCATCATGGGCACCTGCACGCAGATGGCATAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159964.2 |
||
| 3UTR-3UTR TCA 90 bp | AAGAGGTTGGACGAAGGGATTAGATTCTCTGGAATTGGAGTTACAGATGGTTGTTCCTGGTCTACCCTGTaGCTGTTCCCCATCCCATAC | + |
|
Preference number: 2 (lower is better) Translates to: KRLDEGIRFSGIGVTDGCSWSTL*LFPIPY Trigger: GTATGGGATGGGGAACAGTCACAGGGTAGACCAGGA...ACAACCATCTGTAACTCCAATTCCAGAGAATCTAATCCCTTCGTCCAACCTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159964.2 |
||
| 3UTR-3UTR GCA 90 bp | GCCTCCCTAGTGCTGGGATTGCAGGTATGTGGCTCCACCATCCAGCTAAAAGCTAGTGATAGAACAGGATaGCCTAAGATCTTATATTCA | + |
|
Preference number: 2 (lower is better) Translates to: ASLVLGLQVCGSTIQLKASDRTG*PKILYS Trigger: TGAATATAAGATCTTAGGGCATCCTGTTCTATCACT...AGCTTTTAGCTGGATGGTGGAGCCACATACCTGCAATCCCAGCACTAGGGAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159798.8 ENSMUST00000159964.2 |
||
| 3UTR-3UTR TCA 90 bp | AGATTTTATACCACTCCTGGTCTACCCTGTGACTGTTCCCCATCCCATACCTCCAAAGAAAAAGATGTTTaGAACTTTCTGGCTGCCAGC | + |
|
Preference number: 2 (lower is better) Translates to: RFYTTPGLPCDCSPSHTSKEKDV*NFLAAS Trigger: GCTGGCAGCCAGAAAGTTTCAAACATCTTTTTCTTT...GGAGGTATGGGATGGGGAACAGTCACAGGGTAGACCAGGAGTGGTATAAAATCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000159798.8 ENSMUST00000159964.2 |
||
| 3UTR-3UTR GCA 90 bp | ACTAGATTGTCCATGTGGTGCATAGAGAGAAGTATAAAATATGGAACCAAGTGTCAGGCTCTCCATCCATaGAGCCTCAGATCCCTCAGG | + |
|
Preference number: 2 (lower is better) Translates to: TRLSMWCIERSIKYGTKCQALHP*SLRSLR Trigger: CCTGAGGGATCTGAGGCTGCATGGATGGAGAGCCTG...ACACTTGGTTCCATATTTTATACTTCTCTCTATGCACCACATGGACAATCTAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 |
||
| 3UTR-3UTR GCA 90 bp | AGATTGTCCATGTGGTGCATAGAGAGAAGTATAAAATATGGAACCAAGTGTCATCAGGCTCTCCATCCATaGAGCCTCAGATCCCTCAGG | + |
|
Preference number: 2 (lower is better) Translates to: RLSMWCIERSIKYGTKCHQALHP*SLRSLR Trigger: CCTGAGGGATCTGAGGCTGCATGGATGGAGAGCCTG...ATGACACTTGGTTCCATATTTTATACTTCTCTCTATGCACCACATGGACAATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 |
||
| 3UTR-3UTR CCA 90 bp | AGATTTTATACCACTCCTGGTCTACCCTGTGACTGTTCCCCATCCCATACCTCCACTAGATTGTCCATGTaGTGCATAGAGAGAAGTATA | + |
|
Preference number: 2 (lower is better) Translates to: RFYTTPGLPCDCSPSHTSTRLSM*CIERSI Trigger: TATACTTCTCTCTATGCACCACATGGACAATCTAGT...GGAGGTATGGGATGGGGAACAGTCACAGGGTAGACCAGGAGTGGTATAAAATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000159798.8 ENSMUST00000159964.2 |
||
| 3UTR CAA 90 bp | TTGTTTGTATTCATGTGCTCCACCTGTATGCAAGGCTTAAAGAGGTaGGACGAAGGGATTAGATTCTCTGGAATTGGAGTTACAGATGGT | + |
|
Preference number: 2 (lower is better) Translates to: LFVFMCSTCMQGLKR*DEGIRFSGIGVTDG Trigger: ACCATCTGTAACTCCAATTCCAGAGAATCTAATCCCTTCGTCCAACCTCTTTAAGCCTTGCATACAGGTGGAGCACATGAATACAAACAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159964.2 |
||
| 3UTR-3UTR GCA 90 bp | CCATGGGAACAAGAGTTACAGGGAGTTTTAAGCTACTCATCTAACTGGGGTGCTTTGACCGTATGTGCATaGACATTTTGTTTGTATTCA | + |
|
Preference number: 2 (lower is better) Translates to: PWEQELQGVLSYSSNWGALTVCA*TFCLYS Trigger: TGAATACAAACAAAATGTGCATGCACATACGGTCAA...AGCACCCCAGTTAGATGAGTAGCTTAAAACTCCCTGTAACTCTTGTTCCCATGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000159964.2 |
||
| 3UTR-3UTR GCA 90 bp | TTGTTTCCATGGGAACAAGAGTTACAGGGAGTTTTAAGCTACTCATCTAACTGGAGATTGTCCATGTGGTaGATAGAGAGAAGTATAAAA | + |
|
Preference number: 2 (lower is better) Translates to: LFPWEQELQGVLSYSSNWRLSMW*IERSIK Trigger: TTTTATACTTCTCTCTATGCACCACATGGACAATCT...CCAGTTAGATGAGTAGCTTAAAACTCCCTGTAACTCTTGTTCCCATGGAAACAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159964.2 |
||
| 3UTR-3UTR CCA 90 bp | AACTTTGTGCCTGTAACTCCAGAGCTGTGGACACAAAGAAAAAGATGTTTGAAAACTAGATTGTCCATGTaGTGCATAGAGAGAAGTATA | + |
|
Preference number: 2 (lower is better) Translates to: NFVPVTPELWTQRKRCLKTRLSM*CIERSI Trigger: TATACTTCTCTCTATGCACCACATGGACAATCTAGT...TTTCAAACATCTTTTTCTTTGTGTCCACAGCTCTGGAGTTACAGGCACAAAGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000159798.8 ENSMUST00000159964.2 |
||
| 3UTR-3UTR GCA 90 bp | AAGGTGACAGTGATAGAACAGGATGCCCTAAGATCTTATATTCAGAAAGGGATTAGATTGTCCATGTGGTaGATAGAGAGAAGTATAAAA | + |
|
Preference number: 2 (lower is better) Translates to: KVTVIEQDALRSYIQKGIRLSMW*IERSIK Trigger: TTTTATACTTCTCTCTATGCACCACATGGACAATCT...AATCCCTTTCTGAATATAAGATCTTAGGGCATCCTGTTCTATCACTGTCACCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159798.8 ENSMUST00000159964.2 |
||
| 3UTR-3UTR GCA 90 bp | AACTTTGTGCCTGTAACTCCAGAGCTGTGGACACAAAGAAAAAGATGTTTGAAAAGTGATAGAACAGGATaGCCTAAGATCTTATATTCA | + |
|
Preference number: 2 (lower is better) Translates to: NFVPVTPELWTQRKRCLKSDRTG*PKILYS Trigger: TGAATATAAGATCTTAGGGCATCCTGTTCTATCACT...TTTCAAACATCTTTTTCTTTGTGTCCACAGCTCTGGAGTTACAGGCACAAAGTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000159798.8 ENSMUST00000159964.2 |
||
| 3UTR TCA 72 bp | CCACTCCCTGGGGCCTCCAGTCTCTTGAGGGTTAGGTaGATCTTCTCTGACAACCCAGACCTGGCCGTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: PLPGASSLLRVR*IFSDNPDLAVL Trigger: GAGGACGGCCAGGTCTGGGTTGTCAGAGAAGATTCACCTAACCCTCAAGAGACTGGAGGCCCCAGGGAGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159798.8 ENSMUST00000159964.2 |
||
| 3UTR-3UTR CAA 90 bp | GGATGTCCCCACCTCCCCAACCACCACCTCACCAAACCACTCCACTCCCTGGGGATTAAAAAGAGGGGTTaGGGAGATAGTTCAGTAGGT | + |
|
Preference number: 3 (lower is better) Translates to: GCPHLPNHHLTKPLHSLGIKKRG*GDSSVG Trigger: ACCTACTGAACTATCTCCCAAACCCCTCTTTTTAAT...CCCCAGGGAGTGGAGTGGTTTGGTGAGGTGGTGGTTGGGGAGGTGGGGACATCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 2 transcripts: ENSMUST00000159798.8 ENSMUST00000159964.2 |
||
| 3UTR GCA 72 bp | CTCTGTGGACCAGGCAGAAACTTTCAGAGATACTCCTaGCTCTGCCTCCCTAGTGCTGGGATTGCAGGTATG | + |
|
Preference number: 3 (lower is better) Translates to: LCGPGRNFQRYS*LCLPSAGIAGM Trigger: CATACCTGCAATCCCAGCACTAGGGAGGCAGAGGCAGGAGTATCTCTGAAAGTTTCTGCCTGGTCCACAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159798.8 ENSMUST00000159964.2 |
||
| 3UTR TCA 72 bp | CTGTGTGAGTATATGCCATCTGCGTGCAGGTGCCCATaGTGGCCAGAAGAGGTCATTGTTTCCATGGGAACA | + |
|
Preference number: 3 (lower is better) Translates to: LCEYMPSACRCP*WPEEVIVSMGT Trigger: TGTTCCCATGGAAACAATGACCTCTTCTGGCCATCATGGGCACCTGCACGCAGATGGCATATACTCACACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159964.2 |
||
| 3UTR GCA 72 bp | CTCACAGCACCAAGCCATCTCTTCAGCCTCCATGCCTaGAGGCAAGCTTGGACATTGGTAATTTGGGAAAAA | + |
|
Preference number: 3 (lower is better) Translates to: LTAPSHLFSLHA*RQAWTLVIWEK Trigger: TTTTTCCCAAATTACCAATGTCCAAGCTTGCCTGCAGGCATGGAGGCTGAAGAGATGGCTTGGTGCTGTGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159964.2 |
||
| 3UTR CCA 72 bp | TGCCTCTGCCTCCCTAGTGCTGGGATTGCAGGTATGTaGCTCCACCATCCAGCTAAAAGCTGTCTTTTAAAA | + |
|
Preference number: 3 (lower is better) Translates to: CLCLPSAGIAGM*LHHPAKSCLLK Trigger: TTTTAAAAGACAGCTTTTAGCTGGATGGTGGAGCCACATACCTGCAATCCCAGCACTAGGGAGGCAGAGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000159798.8 ENSMUST00000159964.2 |
||
| 3UTR CCA 72 bp | TGTGTTAGGGGCCTCACATCAGCAAGCCTAGTATGCTaGTTTTTCAAGGCAGCATTTCTCTCTGTAGCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: CVRGLTSASLVC*FFKAAFLSVAL Trigger: CAGGGCTACAGAGAGAAATGCTGCCTTGAAAAACCAGCATACTAGGCTTGCTGATGTGAGGCCCCTAACACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000159798.8 ENSMUST00000159964.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCTCTGACAACCCAGACCTGGCCGTCCTCTGCTGTATATGTGTTAGGGGCCTCCAAAGAAAAAGATGTTaGAAACTTTCTGGCTGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: FSDNPDLAVLCCICVRGLQRKRC*KLSGCQ Trigger: CTGGCAGCCAGAAAGTTTCAAACATCTTTTTCTTTG...GAGGCCCCTAACACATATACAGCAGAGGACGGCCAGGTCTGGGTTGTCAGAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000159798.8 ENSMUST00000159964.2 |
||
| 3UTR GCA 72 bp | ATATGTGTTAGGGGCCTCACATCAGCAAGCCTAGTATaGTGGTTTTTCAAGGCAGCATTTCTCTCTGTAGCC | + |
|
Preference number: 3 (lower is better) Translates to: ICVRGLTSASLV*WFFKAAFLSVA Trigger: GGCTACAGAGAGAAATGCTGCCTTGAAAAACCAGCATACTAGGCTTGCTGATGTGAGGCCCCTAACACATAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000159798.8 ENSMUST00000159964.2 |
||
| 3UTR CCA 72 bp | CAAGAGTTACAGGGAGTTTTAAGCTACTCATCTAACTaGGGTGCTCTGCAAGAGCAGCAAACACTCACAGCA | + |
|
Preference number: 3 (lower is better) Translates to: QELQGVLSYSSN*GALQEQQTLTA Trigger: TGCTGTGAGTGTTTGCTGCTCTTGCAGAGCACCCCAGTTAGATGAGTAGCTTAAAACTCCCTGTAACTCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159964.2 |
||
| 3UTR CCA 72 bp | GGTGCCCATGATGGCCAGAAGAGGTCATTGTTTCCATaGGAACAAGAGTTACAGGGAGTTTTAAGCTACTCA | + |
|
Preference number: 3 (lower is better) Translates to: GAHDGQKRSLFP*EQELQGVLSYS Trigger: TGAGTAGCTTAAAACTCCCTGTAACTCTTGTTCCCATGGAAACAATGACCTCTTCTGGCCATCATGGGCACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159964.2 |
||
| 3UTR GCA 72 bp | TGGACACAAAGAAAAAGATGTTTGAAACTTTCTGGCTaGCAGCCTAGCTCTAGAGTCCAGAGACCCTTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: WTQRKRCLKLSG*QPSSRVQRPFL Trigger: GAGAAAGGGTCTCTGGACTCTAGAGCTAGGCTGGCAGCCAGAAAGTTTCAAACATCTTTTTCTTTGTGTCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000159798.8 ENSMUST00000159964.2 |
||
| 3UTR GCA 72 bp | GACCGTATGTGCATGCACATTTTGTTTGTATTCATGTaGTCCACCTGTATGCAAGGCTTAAAGAGGTTGGAC | + |
|
Preference number: 3 (lower is better) Translates to: DRMCMHILFVFM*STCMQGLKRLD Trigger: GTCCAACCTCTTTAAGCCTTGCATACAGGTGGAGCACATGAATACAAACAAAATGTGCATGCACATACGGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159964.2 |
||
| 3UTR TCA 72 bp | TTTGAGTTTGAGTTCCCAGCAACACATTTAAAGATCTaGTATGAACTTTGTGCCTGTAACTCCAGAGCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: FEFEFPATHLKI*YELCACNSRAV Trigger: CACAGCTCTGGAGTTACAGGCACAAAGTTCATATCAGATCTTTAAATGTGTTGCTGGGAACTCAAACTCAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159798.8 ENSMUST00000159964.2 |
||
| 3UTR GCA 72 bp | TTCTCAAAGAACAAAGGTGACAGTGATAGAACAGGATaGCCTAAGATCTTATATTCAGAAAGGGATTGTGTA | + |
|
Preference number: 3 (lower is better) Translates to: FSKNKGDSDRTG*PKILYSERDCV Trigger: TACACAATCCCTTTCTGAATATAAGATCTTAGGGCATCCTGTTCTATCACTGTCACCTTTGTTCTTTGAGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159798.8 ENSMUST00000159964.2 |
||
| CDS-3UTR GCA 90 bp | GGATGTCCCCACCTCCCCAACCACCACCTCACCAAACCACTCCACTCCCTGGGGGGGAGGCCACTGGGGTaGGGAGAGAACGCAGGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GCPHLPNHHLTKPLHSLGGRPLG*GENAGA Trigger: GGCCCCTGCGTTCTCTCCGCACCCCAGTGGCCTCCC...CCCCAGGGAGTGGAGTGGTTTGGTGAGGTGGTGGTTGGGGAGGTGGGGACATCC 68% GC, longest homopolymer 7 nt, total homopolymer stretches 23 nt. Matches the following 2 transcripts: ENSMUST00000159798.8 ENSMUST00000159964.2 |
||
| CDS-3UTR GCA 90 bp | GGATGTCCCCACCTCCCCAACCACCACCTCACCAAACCACTCCACTCCCTGGGGCTCCCCTGGGACTCCTaGTCTCAATTCTGGGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GCPHLPNHHLTKPLHSLGLPWDS*SQFWAQ Trigger: CTGGGCCCAGAATTGAGAGCAGGAGTCCCAGGGGAG...CCCCAGGGAGTGGAGTGGTTTGGTGAGGTGGTGGTTGGGGAGGTGGGGACATCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000159798.8 ENSMUST00000159964.2 |
||
| CDS-3UTR CCA 90 bp | GGATGTCCCCACCTCCCCAACCACCACCTCACCAAACCACTCCACTCCCTGGGGGGGAAAGTGGTAAAGTaGGCCCCGATGCCCAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: GCPHLPNHHLTKPLHSLGGKVVK*APMPST Trigger: GGTGCTGGGCATCGGGGCCCACTTTACCACTTTCCC...CCCCAGGGAGTGGAGTGGTTTGGTGAGGTGGTGGTTGGGGAGGTGGGGACATCC 63% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENSMUST00000159798.8 ENSMUST00000159964.2 |
||
| CDS-3UTR GCA 90 bp | GGATGTCCCCACCTCCCCAACCACCACCTCACCAAACCACTCCACTCCCTGGGGGGAGGTCATTTCCCATaGATCCACAAAGGCCACTCG | + |
|
Preference number: 4 (lower is better) Translates to: GCPHLPNHHLTKPLHSLGGGHFP*IHKGHS Trigger: CGAGTGGCCTTTGTGGATGCATGGGAAATGACCTCC...CCCCAGGGAGTGGAGTGGTTTGGTGAGGTGGTGGTTGGGGAGGTGGGGACATCC 60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000159798.8 ENSMUST00000159964.2 |
||
| CDS-3UTR GCA 90 bp | GGATGTCCCCACCTCCCCAACCACCACCTCACCAAACCACTCCACTCCCTGGGGCTAACATGTAGACAATaGGGCCAGCCAGGCAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GCPHLPNHHLTKPLHSLGLTCRQ*GQPGSS Trigger: TGAACTGCCTGGCTGGCCGCATTGTCTACATGTTAG...CCCCAGGGAGTGGAGTGGTTTGGTGAGGTGGTGGTTGGGGAGGTGGGGACATCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000159798.8 ENSMUST00000159964.2 |
||
| CDS-3UTR CCA 90 bp | TTCTCTGACAACCCAGACCTGGCCGTCCTCTGCTGTATATGTGTTAGGGGCCTCTCCTGCTCTCAATTCTaGGCCCAGCAGCTGTGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: FSDNPDLAVLCCICVRGLSCSQF*AQQLCP Trigger: CGGGCACAGCTGCTGGGCCCAGAATTGAGAGCAGGA...GAGGCCCCTAACACATATACAGCAGAGGACGGCCAGGTCTGGGTTGTCAGAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159798.8 ENSMUST00000159964.2 |
||
| CDS-3UTR CCA 90 bp | ACACTCACAGCACCAAGCCATCTCTTCAGCCTCCATGCCTGCAGGCAAGCTTGGGACAGTGCTGGGTTGTaGGAGCCAATGGATCATGGG | + |
|
Preference number: 4 (lower is better) Translates to: TLTAPSHLFSLHACRQAWDSAGL*EPMDHG Trigger: CCCATGATCCATTGGCTCCCACAACCCAGCACTGTC...CCAAGCTTGCCTGCAGGCATGGAGGCTGAAGAGATGGCTTGGTGCTGTGAGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159964.2 |
||
| CDS-3UTR CCA 90 bp | AGATTTTATACCACTCCTGGTCTACCCTGTGACTGTTCCCCATCCCATACCTCCCGCAGGGGCCAGCTGTaGGCCCTCCAGTGCAACACT | + |
|
Preference number: 4 (lower is better) Translates to: RFYTTPGLPCDCSPSHTSRRGQL*ALQCNT Trigger: AGTGTTGCACTGGAGGGCCCACAGCTGGCCCCTGCG...GGAGGTATGGGATGGGGAACAGTCACAGGGTAGACCAGGAGTGGTATAAAATCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000159798.8 ENSMUST00000159964.2 |
||
| CDS-3UTR CCA 90 bp | GCCTCCCTAGTGCTGGGATTGCAGGTATGTGGCTCCACCATCCAGCTAAAAGCTGACAGTGCTGGGTTGTaGGAGCCAATGGATCATGGG | + |
|
Preference number: 4 (lower is better) Translates to: ASLVLGLQVCGSTIQLKADSAGL*EPMDHG Trigger: CCCATGATCCATTGGCTCCCACAACCCAGCACTGTC...AGCTTTTAGCTGGATGGTGGAGCCACATACCTGCAATCCCAGCACTAGGGAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159798.8 ENSMUST00000159964.2 |
||
| CDS-3UTR TCA 90 bp | GCCTCCCTAGTGCTGGGATTGCAGGTATGTGGCTCCACCATCCAGCTAAAAGCTGATTCACCTGCAGTGTaGGCCAGTCACTGCCATACA | + |
|
Preference number: 4 (lower is better) Translates to: ASLVLGLQVCGSTIQLKADSPAV*ASHCHT Trigger: TGTATGGCAGTGACTGGCTCACACTGCAGGTGAATC...AGCTTTTAGCTGGATGGTGGAGCCACATACCTGCAATCCCAGCACTAGGGAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159798.8 ENSMUST00000159964.2 |
||
| CDS-3UTR CCA 90 bp | CAGCACCAAGCCATCTCTTCAGCCTCCATGCCTGCAGGCAAGCTTGGACATTGGGCCAATAGAGAAGGCTaGTCAGGTTGGGGAGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QHQAISSASMPAGKLGHWANREG*SGWGVL Trigger: AAGAACTCCCCAACCTGACCAGCCTTCTCTATTGGC...CCAATGTCCAAGCTTGCCTGCAGGCATGGAGGCTGAAGAGATGGCTTGGTGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159964.2 |
||
| CDS-3UTR CCA 90 bp | CAGCACCAAGCCATCTCTTCAGCCTCCATGCCTGCAGGCAAGCTTGGACATTGGCCTGTCTTCACCAGTTaGAGGCCAATAGAGAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QHQAISSASMPAGKLGHWPVFTS*RPIEKA Trigger: AGCCTTCTCTATTGGCCTCCAACTGGTGAAGACAGG...CCAATGTCCAAGCTTGCCTGCAGGCATGGAGGCTGAAGAGATGGCTTGGTGCTG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159964.2 |
||
| CDS-3UTR GCA 90 bp | TTCTCTGACAACCCAGACCTGGCCGTCCTCTGCTGTATATGTGTTAGGGGCCTCCTAACATGTAGACAATaGGGCCAGCCAGGCAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: FSDNPDLAVLCCICVRGLLTCRQ*GQPGSS Trigger: TGAACTGCCTGGCTGGCCGCATTGTCTACATGTTAG...GAGGCCCCTAACACATATACAGCAGAGGACGGCCAGGTCTGGGTTGTCAGAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159798.8 ENSMUST00000159964.2 |
||
| CDS-3UTR CCA 90 bp | GCCTCCCTAGTGCTGGGATTGCAGGTATGTGGCTCCACCATCCAGCTAAAAGCTTGGGTGGATGTTGTCTaGCACATTCAAGGTGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: ASLVLGLQVCGSTIQLKAWVDVV*HIQGGG Trigger: ACCTCCACCTTGAATGTGCCAGACAACATCCACCCA...AGCTTTTAGCTGGATGGTGGAGCCACATACCTGCAATCCCAGCACTAGGGAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159798.8 ENSMUST00000159964.2 |
||
| CDS-3UTR GCA 90 bp | AGATTTTATACCACTCCTGGTCTACCCTGTGACTGTTCCCCATCCCATACCTCCTCTCTCCAGACCCTTTaGAGGACCCTAACTGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RFYTTPGLPCDCSPSHTSSLQTL*RTLTAS Trigger: TGAGGCAGTTAGGGTCCTGCAAAGGGTCTGGAGAGA...GGAGGTATGGGATGGGGAACAGTCACAGGGTAGACCAGGAGTGGTATAAAATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000159798.8 ENSMUST00000159964.2 |
||
| CDS-3UTR GCA 90 bp | AGATTGTCCATGTGGTGCATAGAGAGAAGTATAAAATATGGAACCAAGTGTCATGGGAGGCCACTGGGGTaGGGAGAGAACGCAGGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RLSMWCIERSIKYGTKCHGRPLG*GENAGA Trigger: GGCCCCTGCGTTCTCTCCGCACCCCAGTGGCCTCCC...ATGACACTTGGTTCCATATTTTATACTTCTCTCTATGCACCACATGGACAATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 |
||
| CDS-3UTR GCA 90 bp | ACTAGATTGTCCATGTGGTGCATAGAGAGAAGTATAAAATATGGAACCAAGTGTGGGAGGCCACTGGGGTaGGGAGAGAACGCAGGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: TRLSMWCIERSIKYGTKCGRPLG*GENAGA Trigger: GGCCCCTGCGTTCTCTCCGCACCCCAGTGGCCTCCC...ACACTTGGTTCCATATTTTATACTTCTCTCTATGCACCACATGGACAATCTAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 |
||
| CDS-3UTR TCA 90 bp | AGCCTAGCTCTAGAGTCCAGAGACCCTTTCTCAAAGAACAAAGGTGACAGTGATGCTACATGGAGGCCTTaGGGGCAAGGCCATGTTACT | + |
|
Preference number: 4 (lower is better) Translates to: SLALESRDPFSKNKGDSDATWRP*GQGHVT Trigger: AGTAACATGGCCTTGCCCTCAAGGCCTCCATGTAGC...ATCACTGTCACCTTTGTTCTTTGAGAAAGGGTCTCTGGACTCTAGAGCTAGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159798.8 ENSMUST00000159964.2 |
||
| CDS-3UTR GCA 90 bp | AAGAGGTTGGACGAAGGGATTAGATTCTCTGGAATTGGAGTTACAGATGGTTGTCTGTGGGCCCTCCAGTaGAACACTGTCCCCCGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: KRLDEGIRFSGIGVTDGCLWALQ*NTVPRV Trigger: AACTCGGGGGACAGTGTTGCACTGGAGGGCCCACAG...ACAACCATCTGTAACTCCAATTCCAGAGAATCTAATCCCTTCGTCCAACCTCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159964.2 |
||
| CDS-3UTR GCA 90 bp | GGATATATTAACTTGACCGTATGTGCATGCACATTTTGTTTGTATTCATGTGCTGGGAGGCCACTGGGGTaGGGAGAGAACGCAGGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GYINLTVCACTFCLYSCAGRPLG*GENAGA Trigger: GGCCCCTGCGTTCTCTCCGCACCCCAGTGGCCTCCC...AGCACATGAATACAAACAAAATGTGCATGCACATACGGTCAAGTTAATATATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000159964.2 |
||
| CDS-3UTR CCA 90 bp | AGCCTAGCTCTAGAGTCCAGAGACCCTTTCTCAAAGAACAAAGGTGACAGTGATACTCAGGGACAGTGCTaGGTTGTGGGAGCCAATGGA | + |
|
Preference number: 4 (lower is better) Translates to: SLALESRDPFSKNKGDSDTQGQC*VVGANG Trigger: TCCATTGGCTCCCACAACCCAGCACTGTCCCTGAGT...ATCACTGTCACCTTTGTTCTTTGAGAAAGGGTCTCTGGACTCTAGAGCTAGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159798.8 ENSMUST00000159964.2 |
||
| CDS-3UTR CCA 90 bp | AAGGTGACAGTGATAGAACAGGATGCCCTAAGATCTTATATTCAGAAAGGGATTCGCAGGGGCCAGCTGTaGGCCCTCCAGTGCAACACT | + |
|
Preference number: 4 (lower is better) Translates to: KVTVIEQDALRSYIQKGIRRGQL*ALQCNT Trigger: AGTGTTGCACTGGAGGGCCCACAGCTGGCCCCTGCG...AATCCCTTTCTGAATATAAGATCTTAGGGCATCCTGTTCTATCACTGTCACCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159798.8 ENSMUST00000159964.2 |
||
| 3UTR CAA 72 bp | CTGCGTGCAGGTGCCCATGATGGCCAGAAGAGGTCATaGTTTCCATGGGAACAAGAGTTACAGGGAGTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: LRAGAHDGQKRS*FPWEQELQGVL Trigger: TAAAACTCCCTGTAACTCTTGTTCCCATGGAAACAATGACCTCTTCTGGCCATCATGGGCACCTGCACGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159964.2 |
||
| CDS-3UTR GCA 90 bp | AGCCATCTCTTCAGCCTCCATGCCTGCAGGCAAGCTTGGACATTGGTAATTTGGACCTTTTCAGCTGTCTaGAATTCTGCTCCAGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SHLFSLHACRQAWTLVIWTFSAV*NSAPAS Trigger: TGAAGCTGGAGCAGAATTGCAGACAGCTGAAAAGGT...CCAAATTACCAATGTCCAAGCTTGCCTGCAGGCATGGAGGCTGAAGAGATGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159964.2 |
||
| CDS-3UTR CCA 90 bp | ATGTGCTCCACCTGTATGCAAGGCTTAAAGAGGTTGGACGAAGGGATTAGATTCATCCTTCACCTCCCCTaGGACTCCTGCTCTCAATTC | + |
|
Preference number: 4 (lower is better) Translates to: MCSTCMQGLKRLDEGIRFILHLP*DSCSQF Trigger: GAATTGAGAGCAGGAGTCCCAGGGGAGGTGAAGGAT...GAATCTAATCCCTTCGTCCAACCTCTTTAAGCCTTGCATACAGGTGGAGCACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159964.2 |
||
| CDS-3UTR CCA 90 bp | AGATTGTCCATGTGGTGCATAGAGAGAAGTATAAAATATGGAACCAAGTGTCATCGCAGGGGCCAGCTGTaGGCCCTCCAGTGCAACACT | + |
|
Preference number: 4 (lower is better) Translates to: RLSMWCIERSIKYGTKCHRRGQL*ALQCNT Trigger: AGTGTTGCACTGGAGGGCCCACAGCTGGCCCCTGCG...ATGACACTTGGTTCCATATTTTATACTTCTCTCTATGCACCACATGGACAATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 |
||
| CDS-3UTR CCA 90 bp | TTGTTTCCATGGGAACAAGAGTTACAGGGAGTTTTAAGCTACTCATCTAACTGGGGGAAAGTGGTAAAGTaGGCCCCGATGCCCAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: LFPWEQELQGVLSYSSNWGKVVK*APMPST Trigger: GGTGCTGGGCATCGGGGCCCACTTTACCACTTTCCC...CCAGTTAGATGAGTAGCTTAAAACTCCCTGTAACTCTTGTTCCCATGGAAACAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000159964.2 |
||
| CDS-3UTR CCA 90 bp | AGATTTTATACCACTCCTGGTCTACCCTGTGACTGTTCCCCATCCCATACCTCCCTGGCACATTCAAGGTaGAGGTCATTTCCCATGCAT | + |
|
Preference number: 4 (lower is better) Translates to: RFYTTPGLPCDCSPSHTSLAHSR*RSFPMH Trigger: ATGCATGGGAAATGACCTCCACCTTGAATGTGCCAG...GGAGGTATGGGATGGGGAACAGTCACAGGGTAGACCAGGAGTGGTATAAAATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000159798.8 ENSMUST00000159964.2 |
||
| CDS-3UTR GCA 90 bp | AACAAAGGTGACAGTGATAGAACAGGATGCCCTAAGATCTTATATTCAGAAAGGCTGTGGGCCCTCCAGTaGAACACTGTCCCCCGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: NKGDSDRTGCPKILYSERLWALQ*NTVPRV Trigger: AACTCGGGGGACAGTGTTGCACTGGAGGGCCCACAG...CCTTTCTGAATATAAGATCTTAGGGCATCCTGTTCTATCACTGTCACCTTTGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000159798.8 ENSMUST00000159964.2 |
||
| CDS-3UTR CCA 90 bp | TTGTTTCCATGGGAACAAGAGTTACAGGGAGTTTTAAGCTACTCATCTAACTGGTGCTCCAGCTTCAGCTaGTGTCTGGAGGTGCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LFPWEQELQGVLSYSSNWCSSFS*CLEVLE Trigger: CTCCAGCACCTCCAGACACCAGCTGAAGCTGGAGCA...CCAGTTAGATGAGTAGCTTAAAACTCCCTGTAACTCTTGTTCCCATGGAAACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159964.2 |
||
| CDS-3UTR TCA 90 bp | AAGGTGACAGTGATAGAACAGGATGCCCTAAGATCTTATATTCAGAAAGGGATTAGGTTGGGGAGTTCTTaGGGCAGAGAGTCCCAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: KVTVIEQDALRSYIQKGIRLGSS*GRESQS Trigger: CGACTGGGACTCTCTGCCTCAAGAACTCCCCAACCT...AATCCCTTTCTGAATATAAGATCTTAGGGCATCCTGTTCTATCACTGTCACCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159798.8 ENSMUST00000159964.2 |
||
| CDS-3UTR GCA 90 bp | ACTAGATTGTCCATGTGGTGCATAGAGAGAAGTATAAAATATGGAACCAAGTGTCTCCCCTGGGACTCCTaGTCTCAATTCTGGGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TRLSMWCIERSIKYGTKCLPWDS*SQFWAQ Trigger: CTGGGCCCAGAATTGAGAGCAGGAGTCCCAGGGGAG...ACACTTGGTTCCATATTTTATACTTCTCTCTATGCACCACATGGACAATCTAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 |
||
| CDS-3UTR GCA 90 bp | AGATTGTCCATGTGGTGCATAGAGAGAAGTATAAAATATGGAACCAAGTGTCATCTGTGGGCCCTCCAGTaGAACACTGTCCCCCGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: RLSMWCIERSIKYGTKCHLWALQ*NTVPRV Trigger: AACTCGGGGGACAGTGTTGCACTGGAGGGCCCACAG...ATGACACTTGGTTCCATATTTTATACTTCTCTCTATGCACCACATGGACAATCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 |
||
| CDS-3UTR GCA 90 bp | ACTAGATTGTCCATGTGGTGCATAGAGAGAAGTATAAAATATGGAACCAAGTGTCTGTGGGCCCTCCAGTaGAACACTGTCCCCCGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: TRLSMWCIERSIKYGTKCLWALQ*NTVPRV Trigger: AACTCGGGGGACAGTGTTGCACTGGAGGGCCCACAG...ACACTTGGTTCCATATTTTATACTTCTCTCTATGCACCACATGGACAATCTAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 |
||
| CDS-3UTR CCA 90 bp | ATGCACATTTTGTTTGTATTCATGTGCTCCACCTGTATGCAAGGCTTAAAGAGGGAAGGCTGGTCAGGTTaGGGAGTTCTTGAGGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: MHILFVFMCSTCMQGLKREGWSG*GVLEAE Trigger: CTCTGCCTCAAGAACTCCCCAACCTGACCAGCCTTC...CCTCTTTAAGCCTTGCATACAGGTGGAGCACATGAATACAAACAAAATGTGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159964.2 |
||
| CDS-3UTR CCA 90 bp | AGATTGTCCATGTGGTGCATAGAGAGAAGTATAAAATATGGAACCAAGTGTCATTCCTGCTCTCAATTCTaGGCCCAGCAGCTGTGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: RLSMWCIERSIKYGTKCHSCSQF*AQQLCP Trigger: CGGGCACAGCTGCTGGGCCCAGAATTGAGAGCAGGA...ATGACACTTGGTTCCATATTTTATACTTCTCTCTATGCACCACATGGACAATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 |
||
| CDS-3UTR CCA 90 bp | ACTAGATTGTCCATGTGGTGCATAGAGAGAAGTATAAAATATGGAACCAAGTGTTCCTGCTCTCAATTCTaGGCCCAGCAGCTGTGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: TRLSMWCIERSIKYGTKCSCSQF*AQQLCP Trigger: CGGGCACAGCTGCTGGGCCCAGAATTGAGAGCAGGA...ACACTTGGTTCCATATTTTATACTTCTCTCTATGCACCACATGGACAATCTAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 |
||
| CDS-3UTR CCA 90 bp | ACTAGATTGTCCATGTGGTGCATAGAGAGAAGTATAAAATATGGAACCAAGTGTGGGAAAGTGGTAAAGTaGGCCCCGATGCCCAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: TRLSMWCIERSIKYGTKCGKVVK*APMPST Trigger: GGTGCTGGGCATCGGGGCCCACTTTACCACTTTCCC...ACACTTGGTTCCATATTTTATACTTCTCTCTATGCACCACATGGACAATCTAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 |
||
| CDS-3UTR CCA 90 bp | AGATTGTCCATGTGGTGCATAGAGAGAAGTATAAAATATGGAACCAAGTGTCATGGGAAAGTGGTAAAGTaGGCCCCGATGCCCAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: RLSMWCIERSIKYGTKCHGKVVK*APMPST Trigger: GGTGCTGGGCATCGGGGCCCACTTTACCACTTTCCC...ATGACACTTGGTTCCATATTTTATACTTCTCTCTATGCACCACATGGACAATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 |
||
| CDS-3UTR TCA 90 bp | AGATTGTCCATGTGGTGCATAGAGAGAAGTATAAAATATGGAACCAAGTGTCATAGGTTGGGGAGTTCTTaGGGCAGAGAGTCCCAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: RLSMWCIERSIKYGTKCHRLGSS*GRESQS Trigger: CGACTGGGACTCTCTGCCTCAAGAACTCCCCAACCT...ATGACACTTGGTTCCATATTTTATACTTCTCTCTATGCACCACATGGACAATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 |
||
| CDS-3UTR TCA 90 bp | AAGGTGACAGTGATAGAACAGGATGCCCTAAGATCTTATATTCAGAAAGGGATTGGCAAAGTAGAGGGTTaGGCACAGAACCAGCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KVTVIEQDALRSYIQKGIGKVEG*AQNQLS Trigger: GGAGAGCTGGTTCTGTGCTCAACCCTCTACTTTGCC...AATCCCTTTCTGAATATAAGATCTTAGGGCATCCTGTTCTATCACTGTCACCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159798.8 ENSMUST00000159964.2 |
||
| CDS-3UTR TCA 90 bp | AACTTTGTGCCTGTAACTCCAGAGCTGTGGACACAAAGAAAAAGATGTTTGAAAGCTACATGGAGGCCTTaGGGGCAAGGCCATGTTACT | + |
|
Preference number: 4 (lower is better) Translates to: NFVPVTPELWTQRKRCLKATWRP*GQGHVT Trigger: AGTAACATGGCCTTGCCCTCAAGGCCTCCATGTAGC...TTTCAAACATCTTTTTCTTTGTGTCCACAGCTCTGGAGTTACAGGCACAAAGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000159798.8 ENSMUST00000159964.2 |
||
| CDS-3UTR CCA 90 bp | AACAAAGGTGACAGTGATAGAACAGGATGCCCTAAGATCTTATATTCAGAAAGGGAAGGCTGGTCAGGTTaGGGAGTTCTTGAGGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: NKGDSDRTGCPKILYSEREGWSG*GVLEAE Trigger: CTCTGCCTCAAGAACTCCCCAACCTGACCAGCCTTC...CCTTTCTGAATATAAGATCTTAGGGCATCCTGTTCTATCACTGTCACCTTTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159798.8 ENSMUST00000159964.2 |
||
| CDS-3UTR TCA 90 bp | GGATATATTAACTTGACCGTATGTGCATGCACATTTTGTTTGTATTCATGTGCTAGGTTGGGGAGTTCTTaGGGCAGAGAGTCCCAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: GYINLTVCACTFCLYSCARLGSS*GRESQS Trigger: CGACTGGGACTCTCTGCCTCAAGAACTCCCCAACCT...AGCACATGAATACAAACAAAATGTGCATGCACATACGGTCAAGTTAATATATCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159964.2 |
||
| CDS-3UTR TCA 90 bp | ACTAGATTGTCCATGTGGTGCATAGAGAGAAGTATAAAATATGGAACCAAGTGTGGCAAAGTAGAGGGTTaGGCACAGAACCAGCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TRLSMWCIERSIKYGTKCGKVEG*AQNQLS Trigger: GGAGAGCTGGTTCTGTGCTCAACCCTCTACTTTGCC...ACACTTGGTTCCATATTTTATACTTCTCTCTATGCACCACATGGACAATCTAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 |
||
| CDS-3UTR TCA 90 bp | AGATTGTCCATGTGGTGCATAGAGAGAAGTATAAAATATGGAACCAAGTGTCATGGCAAAGTAGAGGGTTaGGCACAGAACCAGCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RLSMWCIERSIKYGTKCHGKVEG*AQNQLS Trigger: GGAGAGCTGGTTCTGTGCTCAACCCTCTACTTTGCC...ATGACACTTGGTTCCATATTTTATACTTCTCTCTATGCACCACATGGACAATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 |
||
| CDS-3UTR TCA 90 bp | AGATTGTCCATGTGGTGCATAGAGAGAAGTATAAAATATGGAACCAAGTGTCATGCTACATGGAGGCCTTaGGGGCAAGGCCATGTTACT | + |
|
Preference number: 4 (lower is better) Translates to: RLSMWCIERSIKYGTKCHATWRP*GQGHVT Trigger: AGTAACATGGCCTTGCCCTCAAGGCCTCCATGTAGC...ATGACACTTGGTTCCATATTTTATACTTCTCTCTATGCACCACATGGACAATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 |
||
| CDS-3UTR TCA 90 bp | AACTTTGTGCCTGTAACTCCAGAGCTGTGGACACAAAGAAAAAGATGTTTGAAAGATTCACCTGCAGTGTaGGCCAGTCACTGCCATACA | + |
|
Preference number: 4 (lower is better) Translates to: NFVPVTPELWTQRKRCLKDSPAV*ASHCHT Trigger: TGTATGGCAGTGACTGGCTCACACTGCAGGTGAATC...TTTCAAACATCTTTTTCTTTGTGTCCACAGCTCTGGAGTTACAGGCACAAAGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000159798.8 ENSMUST00000159964.2 |
||
| CDS-3UTR GCA 90 bp | AAGGTGACAGTGATAGAACAGGATGCCCTAAGATCTTATATTCAGAAAGGGATTGGAGGTCATTTCCCATaGATCCACAAAGGCCACTCG | + |
|
Preference number: 4 (lower is better) Translates to: KVTVIEQDALRSYIQKGIGGHFP*IHKGHS Trigger: CGAGTGGCCTTTGTGGATGCATGGGAAATGACCTCC...AATCCCTTTCTGAATATAAGATCTTAGGGCATCCTGTTCTATCACTGTCACCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159798.8 ENSMUST00000159964.2 |
||
| CDS-3UTR CCA 90 bp | AGATTGTCCATGTGGTGCATAGAGAGAAGTATAAAATATGGAACCAAGTGTCATGACAGTGCTGGGTTGTaGGAGCCAATGGATCATGGG | + |
|
Preference number: 4 (lower is better) Translates to: RLSMWCIERSIKYGTKCHDSAGL*EPMDHG Trigger: CCCATGATCCATTGGCTCCCACAACCCAGCACTGTC...ATGACACTTGGTTCCATATTTTATACTTCTCTCTATGCACCACATGGACAATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 |
||
| CDS-3UTR CCA 90 bp | AGATTGTCCATGTGGTGCATAGAGAGAAGTATAAAATATGGAACCAAGTGTCATACTCAGGGACAGTGCTaGGTTGTGGGAGCCAATGGA | + |
|
Preference number: 4 (lower is better) Translates to: RLSMWCIERSIKYGTKCHTQGQC*VVGANG Trigger: TCCATTGGCTCCCACAACCCAGCACTGTCCCTGAGT...ATGACACTTGGTTCCATATTTTATACTTCTCTCTATGCACCACATGGACAATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 |
||
| CDS-3UTR CCA 90 bp | AGATTGTCCATGTGGTGCATAGAGAGAAGTATAAAATATGGAACCAAGTGTCATGAAGGCTGGTCAGGTTaGGGAGTTCTTGAGGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RLSMWCIERSIKYGTKCHEGWSG*GVLEAE Trigger: CTCTGCCTCAAGAACTCCCCAACCTGACCAGCCTTC...ATGACACTTGGTTCCATATTTTATACTTCTCTCTATGCACCACATGGACAATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 |
||
| CDS-3UTR CCA 90 bp | ACTAGATTGTCCATGTGGTGCATAGAGAGAAGTATAAAATATGGAACCAAGTGTGAAGGCTGGTCAGGTTaGGGAGTTCTTGAGGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: TRLSMWCIERSIKYGTKCEGWSG*GVLEAE Trigger: CTCTGCCTCAAGAACTCCCCAACCTGACCAGCCTTC...ACACTTGGTTCCATATTTTATACTTCTCTCTATGCACCACATGGACAATCTAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 |
||
| 3UTR CAA 72 bp | TTCATGTGCTCCACCTGTATGCAAGGCTTAAAGAGGTaGGACGAAGGGATTAGATTCTCTGGAATTGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: FMCSTCMQGLKR*DEGIRFSGIGV Trigger: AACTCCAATTCCAGAGAATCTAATCCCTTCGTCCAACCTCTTTAAGCCTTGCATACAGGTGGAGCACATGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159964.2 |
||
| CDS-3UTR TCA 90 bp | ACTAGATTGTCCATGTGGTGCATAGAGAGAAGTATAAAATATGGAACCAAGTGTCAGGCCAAGGCATCATaGAGCAGAGCACCAAAACCA | + |
|
Preference number: 4 (lower is better) Translates to: TRLSMWCIERSIKYGTKCQAKAS*SRAPKP Trigger: TGGTTTTGGTGCTCTGCTTCATGATGCCTTGGCCTG...ACACTTGGTTCCATATTTTATACTTCTCTCTATGCACCACATGGACAATCTAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000161047.8 |
||
| CDS-3UTR TCA 90 bp | AGATTGTCCATGTGGTGCATAGAGAGAAGTATAAAATATGGAACCAAGTGTCATCAGGCCAAGGCATCATaGAGCAGAGCACCAAAACCA | + |
|
Preference number: 4 (lower is better) Translates to: RLSMWCIERSIKYGTKCHQAKAS*SRAPKP Trigger: TGGTTTTGGTGCTCTGCTTCATGATGCCTTGGCCTG...ATGACACTTGGTTCCATATTTTATACTTCTCTCTATGCACCACATGGACAATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000161047.8 |
||
| CDS-3UTR TCA 90 bp | ACTAGATTGTCCATGTGGTGCATAGAGAGAAGTATAAAATATGGAACCAAGTGTGATTCACCTGCAGTGTaGGCCAGTCACTGCCATACA | + |
|
Preference number: 4 (lower is better) Translates to: TRLSMWCIERSIKYGTKCDSPAV*ASHCHT Trigger: TGTATGGCAGTGACTGGCTCACACTGCAGGTGAATC...ACACTTGGTTCCATATTTTATACTTCTCTCTATGCACCACATGGACAATCTAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 |
||
| CDS-3UTR TCA 90 bp | AGATTGTCCATGTGGTGCATAGAGAGAAGTATAAAATATGGAACCAAGTGTCATGATTCACCTGCAGTGTaGGCCAGTCACTGCCATACA | + |
|
Preference number: 4 (lower is better) Translates to: RLSMWCIERSIKYGTKCHDSPAV*ASHCHT Trigger: TGTATGGCAGTGACTGGCTCACACTGCAGGTGAATC...ATGACACTTGGTTCCATATTTTATACTTCTCTCTATGCACCACATGGACAATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 |
||
| CDS-3UTR GCA 90 bp | AGATTGTCCATGTGGTGCATAGAGAGAAGTATAAAATATGGAACCAAGTGTCATTCTCTCCAGACCCTTTaGAGGACCCTAACTGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RLSMWCIERSIKYGTKCHSLQTL*RTLTAS Trigger: TGAGGCAGTTAGGGTCCTGCAAAGGGTCTGGAGAGA...ATGACACTTGGTTCCATATTTTATACTTCTCTCTATGCACCACATGGACAATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 |
||
| CDS-3UTR GCA 90 bp | ACTAGATTGTCCATGTGGTGCATAGAGAGAAGTATAAAATATGGAACCAAGTGTTCTCTCCAGACCCTTTaGAGGACCCTAACTGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: TRLSMWCIERSIKYGTKCSLQTL*RTLTAS Trigger: TGAGGCAGTTAGGGTCCTGCAAAGGGTCTGGAGAGA...ACACTTGGTTCCATATTTTATACTTCTCTCTATGCACCACATGGACAATCTAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 |
||
| CDS-3UTR GCA 90 bp | AAGGTGACAGTGATAGAACAGGATGCCCTAAGATCTTATATTCAGAAAGGGATTTTACTCATGTTCCCCTaGGTTGCTGGTAAGACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KVTVIEQDALRSYIQKGILLMFP*VAGKTR Trigger: CCTGGTCTTACCAGCAACGCAGGGGAACATGAGTAA...AATCCCTTTCTGAATATAAGATCTTAGGGCATCCTGTTCTATCACTGTCACCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000159798.8 ENSMUST00000159964.2 |
||
| CDS-3UTR GCA 90 bp | ACTAGATTGTCCATGTGGTGCATAGAGAGAAGTATAAAATATGGAACCAAGTGTGGAGGTCATTTCCCATaGATCCACAAAGGCCACTCG | + |
|
Preference number: 4 (lower is better) Translates to: TRLSMWCIERSIKYGTKCGGHFP*IHKGHS Trigger: CGAGTGGCCTTTGTGGATGCATGGGAAATGACCTCC...ACACTTGGTTCCATATTTTATACTTCTCTCTATGCACCACATGGACAATCTAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 |
||
| CDS-3UTR CCA 90 bp | AGATTGTCCATGTGGTGCATAGAGAGAAGTATAAAATATGGAACCAAGTGTCATATCCTTCACCTCCCCTaGGACTCCTGCTCTCAATTC | + |
|
Preference number: 4 (lower is better) Translates to: RLSMWCIERSIKYGTKCHILHLP*DSCSQF Trigger: GAATTGAGAGCAGGAGTCCCAGGGGAGGTGAAGGAT...ATGACACTTGGTTCCATATTTTATACTTCTCTCTATGCACCACATGGACAATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 |
||
| CDS-3UTR CCA 90 bp | TTCTCAAAGAACAAAGGTGACAGTGATAGAACAGGATGCCCTAAGATCTTATATATCCTTCACCTCCCCTaGGACTCCTGCTCTCAATTC | + |
|
Preference number: 4 (lower is better) Translates to: FSKNKGDSDRTGCPKILYILHLP*DSCSQF Trigger: GAATTGAGAGCAGGAGTCCCAGGGGAGGTGAAGGAT...ATATAAGATCTTAGGGCATCCTGTTCTATCACTGTCACCTTTGTTCTTTGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159798.8 ENSMUST00000159964.2 |
||
| CDS-3UTR CCA 90 bp | ACTAGATTGTCCATGTGGTGCATAGAGAGAAGTATAAAATATGGAACCAAGTGTATCCTTCACCTCCCCTaGGACTCCTGCTCTCAATTC | + |
|
Preference number: 4 (lower is better) Translates to: TRLSMWCIERSIKYGTKCILHLP*DSCSQF Trigger: GAATTGAGAGCAGGAGTCCCAGGGGAGGTGAAGGAT...ACACTTGGTTCCATATTTTATACTTCTCTCTATGCACCACATGGACAATCTAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 |
||
| CDS-3UTR GCA 90 bp | AGATTGTCCATGTGGTGCATAGAGAGAAGTATAAAATATGGAACCAAGTGTCATTTACTCATGTTCCCCTaGGTTGCTGGTAAGACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RLSMWCIERSIKYGTKCHLLMFP*VAGKTR Trigger: CCTGGTCTTACCAGCAACGCAGGGGAACATGAGTAA...ATGACACTTGGTTCCATATTTTATACTTCTCTCTATGCACCACATGGACAATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 |
||
| CDS-3UTR GCA 90 bp | AGATTGTCCATGTGGTGCATAGAGAGAAGTATAAAATATGGAACCAAGTGTCATCTAACATGTAGACAATaGGGCCAGCCAGGCAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RLSMWCIERSIKYGTKCHLTCRQ*GQPGSS Trigger: TGAACTGCCTGGCTGGCCGCATTGTCTACATGTTAG...ATGACACTTGGTTCCATATTTTATACTTCTCTCTATGCACCACATGGACAATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 |
||
| CDS-3UTR GCA 90 bp | ACTAGATTGTCCATGTGGTGCATAGAGAGAAGTATAAAATATGGAACCAAGTGTCTAACATGTAGACAATaGGGCCAGCCAGGCAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TRLSMWCIERSIKYGTKCLTCRQ*GQPGSS Trigger: TGAACTGCCTGGCTGGCCGCATTGTCTACATGTTAG...ACACTTGGTTCCATATTTTATACTTCTCTCTATGCACCACATGGACAATCTAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 |
||
| CDS-3UTR CCA 90 bp | ACTAGATTGTCCATGTGGTGCATAGAGAGAAGTATAAAATATGGAACCAAGTGTGCCAATAGAGAAGGCTaGTCAGGTTGGGGAGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TRLSMWCIERSIKYGTKCANREG*SGWGVL Trigger: AAGAACTCCCCAACCTGACCAGCCTTCTCTATTGGC...ACACTTGGTTCCATATTTTATACTTCTCTCTATGCACCACATGGACAATCTAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 |
||
| CDS-3UTR CCA 90 bp | TTCTCAAAGAACAAAGGTGACAGTGATAGAACAGGATGCCCTAAGATCTTATATGCCAATAGAGAAGGCTaGTCAGGTTGGGGAGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: FSKNKGDSDRTGCPKILYANREG*SGWGVL Trigger: AAGAACTCCCCAACCTGACCAGCCTTCTCTATTGGC...ATATAAGATCTTAGGGCATCCTGTTCTATCACTGTCACCTTTGTTCTTTGAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159798.8 ENSMUST00000159964.2 |
||
| CDS-3UTR CCA 90 bp | AGATTGTCCATGTGGTGCATAGAGAGAAGTATAAAATATGGAACCAAGTGTCATCCTGTCTTCACCAGTTaGAGGCCAATAGAGAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RLSMWCIERSIKYGTKCHPVFTS*RPIEKA Trigger: AGCCTTCTCTATTGGCCTCCAACTGGTGAAGACAGG...ATGACACTTGGTTCCATATTTTATACTTCTCTCTATGCACCACATGGACAATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 |
||
| CDS-3UTR CCA 90 bp | TTCTCAAAGAACAAAGGTGACAGTGATAGAACAGGATGCCCTAAGATCTTATATCCTGTCTTCACCAGTTaGAGGCCAATAGAGAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: FSKNKGDSDRTGCPKILYPVFTS*RPIEKA Trigger: AGCCTTCTCTATTGGCCTCCAACTGGTGAAGACAGG...ATATAAGATCTTAGGGCATCCTGTTCTATCACTGTCACCTTTGTTCTTTGAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159798.8 ENSMUST00000159964.2 |
||
| CDS-3UTR CCA 90 bp | AGATTGTCCATGTGGTGCATAGAGAGAAGTATAAAATATGGAACCAAGTGTCATTGGGTGGATGTTGTCTaGCACATTCAAGGTGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: RLSMWCIERSIKYGTKCHWVDVV*HIQGGG Trigger: ACCTCCACCTTGAATGTGCCAGACAACATCCACCCA...ATGACACTTGGTTCCATATTTTATACTTCTCTCTATGCACCACATGGACAATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 |
||
| CDS-3UTR CCA 90 bp | AGATTGTCCATGTGGTGCATAGAGAGAAGTATAAAATATGGAACCAAGTGTCATCTGGCACATTCAAGGTaGAGGTCATTTCCCATGCAT | + |
|
Preference number: 4 (lower is better) Translates to: RLSMWCIERSIKYGTKCHLAHSR*RSFPMH Trigger: ATGCATGGGAAATGACCTCCACCTTGAATGTGCCAG...ATGACACTTGGTTCCATATTTTATACTTCTCTCTATGCACCACATGGACAATCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 |
||
| CDS-3UTR TCA 90 bp | ACTAGATTGTCCATGTGGTGCATAGAGAGAAGTATAAAATATGGAACCAAGTGTCAAGGCTATTATATTTaGTGCTCTGGGTTCAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TRLSMWCIERSIKYGTKCQGYYI*CSGFKS Trigger: AGACTTGAACCCAGAGCATCAAATATAATAGCCTTG...ACACTTGGTTCCATATTTTATACTTCTCTCTATGCACCACATGGACAATCTAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161047.8 |
||
| 3UTR CAA 72 bp | TTTGTCTCTCTTGACCTAAGATGTTCTCTATTCCTTTaGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: FVSLDLRCSLFL*LLLLLLLLLLL Trigger: CAACAACAACAACAACAACAACAACAACAACAACAAAAGGAATAGAGAACATCTTAGGTCAAGAGAGACAAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159964.2 |
||
| CDS GCA 90 bp | GGCCGTGTAGTTCTCTGGCCACAGAGTGCAGGGAGGCCACTGGGGTaGGGAGAGAACGCAGGGGCCAGCTGTGGGCCCTCCAGTGCAACA | + |
|
Preference number: 5 (lower is better) Translates to: GRVVLWPQSAGRPLG*GENAGASCGPSSAT Trigger: TGTTGCACTGGAGGGCCCACAGCTGGCCCCTGCGTTCTCTCCGCACCCCAGTGGCCTCCCTGCACTCTGTGGCCAGAGAACTACACGGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 |
||
| CDS CCA 90 bp | GCACCACCACTGTGTAGGGTCCCCCAGCCAGGCCGTGTAGTTCTCTaGCCACAGAGTGCAGGGAGGCCACTGGGGTGCGGAGAGAACGCA | + |
|
Preference number: 5 (lower is better) Translates to: APPLCRVPQPGRVVL*PQSAGRPLGCGENA Trigger: TGCGTTCTCTCCGCACCCCAGTGGCCTCCCTGCACTCTGTGGCCAGAGAACTACACGGCCTGGCTGGGGGACCCTACACAGTGGTGGTGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 |
||
| CDS GCA 90 bp | CTTTGCAGGACCCTAACTGCCTCACTGGAGTGGATCAGCCGCACTTaGACCTGGGCCCGTCCAGCCCAGAGCAGGGGGAACGACAAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LCRTLTASLEWISRT*TWARPAQSRGNDKR Trigger: CCTCTTGTCGTTCCCCCTGCTCTGGGCTGGACGGGCCCAGGTGCAAGTGCGGCTGATCCACTCCAGTGAGGCAGTTAGGGTCCTGCAAAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 |
||
| CDS GCA 90 bp | CCTGGGCCCGTCCAGCCCAGAGCAGGGGGAACGACAAGAGGTAAGTaGCATTCTTCAGATCCTTCACCTCCCCTGGGACTCCTGCTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: PGPVQPRAGGTTRGK*HSSDPSPPLGLLLS Trigger: TGAGAGCAGGAGTCCCAGGGGAGGTGAAGGATCTGAAGAATGGCACTTACCTCTTGTCGTTCCCCCTGCTCTGGGCTGGACGGGCCCAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 ENSMUST00000162519.2 |
||
| CDS CCA 90 bp | TTTTCTCTCCAGACCCTTTGCAGGACCCTAACTGCCTCACTGGAGTaGATCAGCCGCACTTGCACCTGGGCCCGTCCAGCCCAGAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: FSLQTLCRTLTASLE*ISRTCTWARPAQSR Trigger: CCTGCTCTGGGCTGGACGGGCCCAGGTGCAAGTGCGGCTGATCCACTCCAGTGAGGCAGTTAGGGTCCTGCAAAGGGTCTGGAGAGAAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 |
||
| CDS-3UTR CAA 90 bp | GGATGTCCCCACCTCCCCAACCACCACCTCACCAAACCACTCCACTCCCTGGGGCCCTGTCTTCACCAGTaGGAGGCCAATAGAGAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: GCPHLPNHHLTKPLHSLGPCLHQ*EANREG Trigger: GCCTTCTCTATTGGCCTCCAACTGGTGAAGACAGGG...CCCCAGGGAGTGGAGTGGTTTGGTGAGGTGGTGGTTGGGGAGGTGGGGACATCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000159798.8 ENSMUST00000159964.2 |
||
| CDS-3UTR CAA 90 bp | GGATGTCCCCACCTCCCCAACCACCACCTCACCAAACCACTCCACTCCCTGGGGTTCTCTCCAGACCCTTaGCAGGACCCTAACTGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: GCPHLPNHHLTKPLHSLGFSPDP*QDPNCL Trigger: GAGGCAGTTAGGGTCCTGCAAAGGGTCTGGAGAGAA...CCCCAGGGAGTGGAGTGGTTTGGTGAGGTGGTGGTTGGGGAGGTGGGGACATCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000159798.8 ENSMUST00000159964.2 |
||
| CDS-3UTR CAA 90 bp | GGATGTCCCCACCTCCCCAACCACCACCTCACCAAACCACTCCACTCCCTGGGGCCAGAAACCACATCCTaGTACTGGCAGGTAGGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: GCPHLPNHHLTKPLHSLGPETTS*YWQVGP Trigger: AGGGCCTACCTGCCAGTACAAGGATGTGGTTTCTGG...CCCCAGGGAGTGGAGTGGTTTGGTGAGGTGGTGGTTGGGGAGGTGGGGACATCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000159798.8 ENSMUST00000159964.2 |
||
| CDS GCA 90 bp | GATGACCAGAGTACTGGGTTCGTGGTCCAACAGGGCCTTCACAGCTaGCCGAATCCCTACCAGTCTTCGGGCAAAGATGGAGGGAGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: DDQSTGFVVQQGLHS*PNPYQSSGKDGGRE Trigger: TTCCCTCCCTCCATCTTTGCCCGAAGACTGGTAGGGATTCGGGCAGCTGTGAAGGCCCTGTTGGACCACGAACCCAGTACTCTGGTCATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 |
||
| CDS CCA 90 bp | GGCTGGTCAGGTTGGGGAGTTCTTGAGGCAGAGAGTCCCAGTCGATaGATTCTGAGACATACTCAGGGACAGTGCTGGGTTGTGGGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: GWSGWGVLEAESPSR*ILRHTQGQCWVVGA Trigger: GGCTCCCACAACCCAGCACTGTCCCTGAGTATGTCTCAGAATCCATCGACTGGGACTCTCTGCCTCAAGAACTCCCCAACCTGACCAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 ENSMUST00000162519.2 |
||
| CDS GCA 90 bp | GAGGTAAGTGCCATTCTTCAGATCCTTCACCTCCCCTGGGACTCCTaGTCTCAATTCTGGGCCCAGCAGCTGTGCCCGAAACAGATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: EVSAILQILHLPWDS*SQFWAQQLCPKQIS Trigger: GGAGATCTGTTTCGGGCACAGCTGCTGGGCCCAGAATTGAGAGCAGGAGTCCCAGGGGAGGTGAAGGATCTGAAGAATGGCACTTACCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 ENSMUST00000162519.2 |
||
| CDS-3UTR CAA 90 bp | ACACTCACAGCACCAAGCCATCTCTTCAGCCTCCATGCCTGCAGGCAAGCTTGGAGGGACAGTGCTGGGTaGTGGGAGCCAATGGATCAT | + |
|
Preference number: 5 (lower is better) Translates to: TLTAPSHLFSLHACRQAWRDSAG*WEPMDH Trigger: ATGATCCATTGGCTCCCACAACCCAGCACTGTCCCT...CCAAGCTTGCCTGCAGGCATGGAGGCTGAAGAGATGGCTTGGTGCTGTGAGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159964.2 |
||
| CDS CCA 90 bp | GAACGACAAGAGGTAAGTGCCATTCTTCAGATCCTTCACCTCCCCTaGGACTCCTGCTCTCAATTCTGGGCCCAGCAGCTGTGCCCGAAA | + |
|
Preference number: 5 (lower is better) Translates to: ERQEVSAILQILHLP*DSCSQFWAQQLCPK Trigger: TTTCGGGCACAGCTGCTGGGCCCAGAATTGAGAGCAGGAGTCCCAGGGGAGGTGAAGGATCTGAAGAATGGCACTTACCTCTTGTCGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 ENSMUST00000162519.2 |
||
| CDS-3UTR CAA 90 bp | TTCTCTGACAACCCAGACCTGGCCGTCCTCTGCTGTATATGTGTTAGGGGCCTCCCCTGTCTTCACCAGTaGGAGGCCAATAGAGAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: FSDNPDLAVLCCICVRGLPCLHQ*EANREG Trigger: GCCTTCTCTATTGGCCTCCAACTGGTGAAGACAGGG...GAGGCCCCTAACACATATACAGCAGAGGACGGCCAGGTCTGGGTTGTCAGAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000159798.8 ENSMUST00000159964.2 |
||
| CDS-3UTR CAA 90 bp | GGATGTCCCCACCTCCCCAACCACCACCTCACCAAACCACTCCACTCCCTGGGGTCAGATAACTTCCACTaGAGTGACCCACTAAAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: GCPHLPNHHLTKPLHSLGSDNFH*SDPLKH Trigger: ATGCTTTAGTGGGTCACTCAAGTGGAAGTTATCTGA...CCCCAGGGAGTGGAGTGGTTTGGTGAGGTGGTGGTTGGGGAGGTGGGGACATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000159798.8 ENSMUST00000159964.2 |
||
| CDS-3UTR CAA 90 bp | AGATTTTATACCACTCCTGGTCTACCCTGTGACTGTTCCCCATCCCATACCTCCAGAAGCCAGAGGGTTTaGGAGACAGGTGGCCCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: RFYTTPGLPCDCSPSHTSRSQRV*ETGGPG Trigger: GCCCGGGCCACCTGTCTCCAAAACCCTCTGGCTTCT...GGAGGTATGGGATGGGGAACAGTCACAGGGTAGACCAGGAGTGGTATAAAATCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000159798.8 ENSMUST00000159964.2 |
||
| CDS TCA 90 bp | CAGGTTGGGGAGTTCTTGAGGCAGAGAGTCCCAGTCGATGGATTCTaGGACATACTCAGGGACAGTGCTGGGTTGTGGGAGCCAATGGAT | + |
|
Preference number: 5 (lower is better) Translates to: QVGEFLRQRVPVDGF*DILRDSAGLWEPMD Trigger: ATCCATTGGCTCCCACAACCCAGCACTGTCCCTGAGTATGTCTCAGAATCCATCGACTGGGACTCTCTGCCTCAAGAACTCCCCAACCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 ENSMUST00000162519.2 |
||
| CDS GCA 90 bp | CTACATGGAGGCCTTGAGGGCAAGGCCATGTTACTCATGTTCCCCTaGGTTGCTGGTAAGACCAGGATTGGAGGTACACCTGAAGGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: LHGGLEGKAMLLMFP*VAGKTRIGGTPEGS Trigger: ACTCCCTTCAGGTGTACCTCCAATCCTGGTCTTACCAGCAACGCAGGGGAACATGAGTAACATGGCCTTGCCCTCAAGGCCTCCATGTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 |
||
| CDS CCA 90 bp | ACCACATCCTTGTACTGGCAGGTAGGCCCTTTGGCTCCAGTTGACTaGGGGTCCACGTTACAGATGACAGTCTCTAGAGGCCCATCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: TTSLYWQVGPLAPVD*GSTLQMTVSRGPSV Trigger: AACAGATGGGCCTCTAGAGACTGTCATCTGTAACGTGGACCCCCAGTCAACTGGAGCCAAAGGGCCTACCTGCCAGTACAAGGATGTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 |
||
| CDS-3UTR CAA 90 bp | AGCCTAGCTCTAGAGTCCAGAGACCCTTTCTCAAAGAACAAAGGTGACAGTGATTGGCAGGTAGGCCCTTaGGCTCCAGTTGACTGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SLALESRDPFSKNKGDSDWQVGP*APVDWG Trigger: CCCCCAGTCAACTGGAGCCAAAGGGCCTACCTGCCA...ATCACTGTCACCTTTGTTCTTTGAGAAAGGGTCTCTGGACTCTAGAGCTAGGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159798.8 ENSMUST00000159964.2 |
||
| CDS-3UTR CAA 90 bp | AGATTTTATACCACTCCTGGTCTACCCTGTGACTGTTCCCCATCCCATACCTCCGGGCAAAGTAGAGGGTaGAGCACAGAACCAGCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: RFYTTPGLPCDCSPSHTSGQSRG*STEPAL Trigger: GAGAGCTGGTTCTGTGCTCAACCCTCTACTTTGCCC...GGAGGTATGGGATGGGGAACAGTCACAGGGTAGACCAGGAGTGGTATAAAATCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000159798.8 ENSMUST00000159964.2 |
||
| CDS-3UTR CAA 90 bp | AGCCATCTCTTCAGCCTCCATGCCTGCAGGCAAGCTTGGACATTGGTAATTTGGCTGGTAAGACCAGGATaGGAGGTACACCTGAAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: SHLFSLHACRQAWTLVIWLVRPG*EVHLKG Trigger: TCCCTTCAGGTGTACCTCCAATCCTGGTCTTACCAG...CCAAATTACCAATGTCCAAGCTTGCCTGCAGGCATGGAGGCTGAAGAGATGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159964.2 |
||
| CDS-3UTR CAA 90 bp | AAGAGGTTGGACGAAGGGATTAGATTCTCTGGAATTGGAGTTACAGATGGTTGTAGAAGCCAGAGGGTTTaGGAGACAGGTGGCCCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: KRLDEGIRFSGIGVTDGCRSQRV*ETGGPG Trigger: GCCCGGGCCACCTGTCTCCAAAACCCTCTGGCTTCT...ACAACCATCTGTAACTCCAATTCCAGAGAATCTAATCCCTTCGTCCAACCTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159964.2 |
||
| CDS-3UTR CAA 90 bp | AGCCTAGCTCTAGAGTCCAGAGACCCTTTCTCAAAGAACAAAGGTGACAGTGATAGGGACAGTGCTGGGTaGTGGGAGCCAATGGATCAT | + |
|
Preference number: 5 (lower is better) Translates to: SLALESRDPFSKNKGDSDRDSAG*WEPMDH Trigger: ATGATCCATTGGCTCCCACAACCCAGCACTGTCCCT...ATCACTGTCACCTTTGTTCTTTGAGAAAGGGTCTCTGGACTCTAGAGCTAGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159798.8 ENSMUST00000159964.2 |
||
| CDS-3UTR CAA 90 bp | AACAAAGGTGACAGTGATAGAACAGGATGCCCTAAGATCTTATATTCAGAAAGGTGGCAGGTAGGCCCTTaGGCTCCAGTTGACTGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: NKGDSDRTGCPKILYSERWQVGP*APVDWG Trigger: CCCCCAGTCAACTGGAGCCAAAGGGCCTACCTGCCA...CCTTTCTGAATATAAGATCTTAGGGCATCCTGTTCTATCACTGTCACCTTTGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159798.8 ENSMUST00000159964.2 |
||
| CDS-3UTR CAA 90 bp | AGCCTAGCTCTAGAGTCCAGAGACCCTTTCTCAAAGAACAAAGGTGACAGTGATCTGGTAAGACCAGGATaGGAGGTACACCTGAAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: SLALESRDPFSKNKGDSDLVRPG*EVHLKG Trigger: TCCCTTCAGGTGTACCTCCAATCCTGGTCTTACCAG...ATCACTGTCACCTTTGTTCTTTGAGAAAGGGTCTCTGGACTCTAGAGCTAGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159798.8 ENSMUST00000159964.2 |
||
| CDS-3UTR CAA 90 bp | AGATTGTCCATGTGGTGCATAGAGAGAAGTATAAAATATGGAACCAAGTGTCATTGGCAGGTAGGCCCTTaGGCTCCAGTTGACTGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: RLSMWCIERSIKYGTKCHWQVGP*APVDWG Trigger: CCCCCAGTCAACTGGAGCCAAAGGGCCTACCTGCCA...ATGACACTTGGTTCCATATTTTATACTTCTCTCTATGCACCACATGGACAATCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 |
||
| CDS-3UTR CAA 90 bp | ACTAGATTGTCCATGTGGTGCATAGAGAGAAGTATAAAATATGGAACCAAGTGTTGGCAGGTAGGCCCTTaGGCTCCAGTTGACTGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: TRLSMWCIERSIKYGTKCWQVGP*APVDWG Trigger: CCCCCAGTCAACTGGAGCCAAAGGGCCTACCTGCCA...ACACTTGGTTCCATATTTTATACTTCTCTCTATGCACCACATGGACAATCTAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 |
||
| CDS-3UTR CAA 90 bp | ACTAGATTGTCCATGTGGTGCATAGAGAGAAGTATAAAATATGGAACCAAGTGTAGAAGCCAGAGGGTTTaGGAGACAGGTGGCCCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: TRLSMWCIERSIKYGTKCRSQRV*ETGGPG Trigger: GCCCGGGCCACCTGTCTCCAAAACCCTCTGGCTTCT...ACACTTGGTTCCATATTTTATACTTCTCTCTATGCACCACATGGACAATCTAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 |
||
| CDS-3UTR CAA 90 bp | ATGCACATTTTGTTTGTATTCATGTGCTCCACCTGTATGCAAGGCTTAAAGAGGGGGCAAAGTAGAGGGTaGAGCACAGAACCAGCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: MHILFVFMCSTCMQGLKRGQSRG*STEPAL Trigger: GAGAGCTGGTTCTGTGCTCAACCCTCTACTTTGCCC...CCTCTTTAAGCCTTGCATACAGGTGGAGCACATGAATACAAACAAAATGTGCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159964.2 |
||
| CDS CCA 90 bp | GGCTACATGGAGGCCTTGAGGGCAAGGCTATTATATTTGATGCTCTaGGTTCAAGTCTTAGCACTGAATAAACCAGCTTTGTCAGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: GYMEALRARLLYLML*VQVLALNKPALSAS Trigger: AGAAGCTGACAAAGCTGGTTTATTCAGTGCTAAGACTTGAACCCAGAGCATCAAATATAATAGCCTTGCCCTCAAGGCCTCCATGTAGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161047.8 |
||
| CDS-3UTR CAA 90 bp | ACTAGATTGTCCATGTGGTGCATAGAGAGAAGTATAAAATATGGAACCAAGTGTCAGGTTGGGGAGTTCTaGAGGCAGAGAGTCCCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: TRLSMWCIERSIKYGTKCQVGEF*RQRVPV Trigger: GACTGGGACTCTCTGCCTCAAGAACTCCCCAACCTG...ACACTTGGTTCCATATTTTATACTTCTCTCTATGCACCACATGGACAATCTAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 |
||
| CDS-3UTR CAA 90 bp | AACAAAGGTGACAGTGATAGAACAGGATGCCCTAAGATCTTATATTCAGAAAGGTTCTCTCCAGACCCTTaGCAGGACCCTAACTGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: NKGDSDRTGCPKILYSERFSPDP*QDPNCL Trigger: GAGGCAGTTAGGGTCCTGCAAAGGGTCTGGAGAGAA...CCTTTCTGAATATAAGATCTTAGGGCATCCTGTTCTATCACTGTCACCTTTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159798.8 ENSMUST00000159964.2 |
||
| CDS-3UTR CAA 90 bp | AGATTGTCCATGTGGTGCATAGAGAGAAGTATAAAATATGGAACCAAGTGTCATAGGGACAGTGCTGGGTaGTGGGAGCCAATGGATCAT | + |
|
Preference number: 5 (lower is better) Translates to: RLSMWCIERSIKYGTKCHRDSAG*WEPMDH Trigger: ATGATCCATTGGCTCCCACAACCCAGCACTGTCCCT...ATGACACTTGGTTCCATATTTTATACTTCTCTCTATGCACCACATGGACAATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 |
||
| CDS-3UTR CAA 90 bp | ACTAGATTGTCCATGTGGTGCATAGAGAGAAGTATAAAATATGGAACCAAGTGTAGGGACAGTGCTGGGTaGTGGGAGCCAATGGATCAT | + |
|
Preference number: 5 (lower is better) Translates to: TRLSMWCIERSIKYGTKCRDSAG*WEPMDH Trigger: ATGATCCATTGGCTCCCACAACCCAGCACTGTCCCT...ACACTTGGTTCCATATTTTATACTTCTCTCTATGCACCACATGGACAATCTAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 |
||
| CDS-3UTR CAA 90 bp | ACTAGATTGTCCATGTGGTGCATAGAGAGAAGTATAAAATATGGAACCAAGTGTCCCTGTCTTCACCAGTaGGAGGCCAATAGAGAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: TRLSMWCIERSIKYGTKCPCLHQ*EANREG Trigger: GCCTTCTCTATTGGCCTCCAACTGGTGAAGACAGGG...ACACTTGGTTCCATATTTTATACTTCTCTCTATGCACCACATGGACAATCTAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 |
||
| CDS-3UTR CAA 90 bp | AGATTGTCCATGTGGTGCATAGAGAGAAGTATAAAATATGGAACCAAGTGTCATCCCTGTCTTCACCAGTaGGAGGCCAATAGAGAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: RLSMWCIERSIKYGTKCHPCLHQ*EANREG Trigger: GCCTTCTCTATTGGCCTCCAACTGGTGAAGACAGGG...ATGACACTTGGTTCCATATTTTATACTTCTCTCTATGCACCACATGGACAATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 |
||
| CDS-3UTR CAA 90 bp | AGATTGTCCATGTGGTGCATAGAGAGAAGTATAAAATATGGAACCAAGTGTCATTTCTCTCCAGACCCTTaGCAGGACCCTAACTGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: RLSMWCIERSIKYGTKCHFSPDP*QDPNCL Trigger: GAGGCAGTTAGGGTCCTGCAAAGGGTCTGGAGAGAA...ATGACACTTGGTTCCATATTTTATACTTCTCTCTATGCACCACATGGACAATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 |
||
| CDS-3UTR CAA 90 bp | AGATTGTCCATGTGGTGCATAGAGAGAAGTATAAAATATGGAACCAAGTGTCATCCAGAAACCACATCCTaGTACTGGCAGGTAGGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: RLSMWCIERSIKYGTKCHPETTS*YWQVGP Trigger: AGGGCCTACCTGCCAGTACAAGGATGTGGTTTCTGG...ATGACACTTGGTTCCATATTTTATACTTCTCTCTATGCACCACATGGACAATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 |
||
| CDS-3UTR CAA 90 bp | ACTAGATTGTCCATGTGGTGCATAGAGAGAAGTATAAAATATGGAACCAAGTGTCCAGAAACCACATCCTaGTACTGGCAGGTAGGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: TRLSMWCIERSIKYGTKCPETTS*YWQVGP Trigger: AGGGCCTACCTGCCAGTACAAGGATGTGGTTTCTGG...ACACTTGGTTCCATATTTTATACTTCTCTCTATGCACCACATGGACAATCTAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 |
||
| CDS-3UTR CAA 90 bp | AGATTGTCCATGTGGTGCATAGAGAGAAGTATAAAATATGGAACCAAGTGTCATGGGCAAAGTAGAGGGTaGAGCACAGAACCAGCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: RLSMWCIERSIKYGTKCHGQSRG*STEPAL Trigger: GAGAGCTGGTTCTGTGCTCAACCCTCTACTTTGCCC...ATGACACTTGGTTCCATATTTTATACTTCTCTCTATGCACCACATGGACAATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 |
||
| CDS-3UTR CAA 90 bp | ACTAGATTGTCCATGTGGTGCATAGAGAGAAGTATAAAATATGGAACCAAGTGTGGGCAAAGTAGAGGGTaGAGCACAGAACCAGCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: TRLSMWCIERSIKYGTKCGQSRG*STEPAL Trigger: GAGAGCTGGTTCTGTGCTCAACCCTCTACTTTGCCC...ACACTTGGTTCCATATTTTATACTTCTCTCTATGCACCACATGGACAATCTAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 |
||
| CDS-3UTR CAA 90 bp | AGATTGTCCATGTGGTGCATAGAGAGAAGTATAAAATATGGAACCAAGTGTCATCTGGTAAGACCAGGATaGGAGGTACACCTGAAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: RLSMWCIERSIKYGTKCHLVRPG*EVHLKG Trigger: TCCCTTCAGGTGTACCTCCAATCCTGGTCTTACCAG...ATGACACTTGGTTCCATATTTTATACTTCTCTCTATGCACCACATGGACAATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 |
||
| CDS-3UTR CAA 90 bp | ACTAGATTGTCCATGTGGTGCATAGAGAGAAGTATAAAATATGGAACCAAGTGTCTGGTAAGACCAGGATaGGAGGTACACCTGAAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: TRLSMWCIERSIKYGTKCLVRPG*EVHLKG Trigger: TCCCTTCAGGTGTACCTCCAATCCTGGTCTTACCAG...ACACTTGGTTCCATATTTTATACTTCTCTCTATGCACCACATGGACAATCTAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 |
||
| CDS-3UTR CAA 90 bp | ACTAGATTGTCCATGTGGTGCATAGAGAGAAGTATAAAATATGGAACCAAGTGTTTCCTTGGGTGGATGTaGTCTGGCACATTCAAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: TRLSMWCIERSIKYGTKCFLGWM*SGTFKV Trigger: CACCTTGAATGTGCCAGACAACATCCACCCAAGGAA...ACACTTGGTTCCATATTTTATACTTCTCTCTATGCACCACATGGACAATCTAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 |
||
| CDS-3UTR CAA 90 bp | AGATTGTCCATGTGGTGCATAGAGAGAAGTATAAAATATGGAACCAAGTGTCATTTCCTTGGGTGGATGTaGTCTGGCACATTCAAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: RLSMWCIERSIKYGTKCHFLGWM*SGTFKV Trigger: CACCTTGAATGTGCCAGACAACATCCACCCAAGGAA...ATGACACTTGGTTCCATATTTTATACTTCTCTCTATGCACCACATGGACAATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 |
||
| CDS-3UTR CAA 90 bp | AGATTGTCCATGTGGTGCATAGAGAGAAGTATAAAATATGGAACCAAGTGTCATCCAGTATTGGCCAGTTaGATGATGACCAGAGTACTG | + |
|
Preference number: 5 (lower is better) Translates to: RLSMWCIERSIKYGTKCHPVLAS*MMTRVL Trigger: CAGTACTCTGGTCATCATCAAACTGGCCAATACTGG...ATGACACTTGGTTCCATATTTTATACTTCTCTCTATGCACCACATGGACAATCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 |
||
| CDS-3UTR CAA 90 bp | TTCTCAAAGAACAAAGGTGACAGTGATAGAACAGGATGCCCTAAGATCTTATATCCAGTATTGGCCAGTTaGATGATGACCAGAGTACTG | + |
|
Preference number: 5 (lower is better) Translates to: FSKNKGDSDRTGCPKILYPVLAS*MMTRVL Trigger: CAGTACTCTGGTCATCATCAAACTGGCCAATACTGG...ATATAAGATCTTAGGGCATCCTGTTCTATCACTGTCACCTTTGTTCTTTGAGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159798.8 ENSMUST00000159964.2 |
||
| CDS-3UTR CAA 90 bp | GGATATATTAACTTGACCGTATGTGCATGCACATTTTGTTTGTATTCATGTGCTCCAGTATTGGCCAGTTaGATGATGACCAGAGTACTG | + |
|
Preference number: 5 (lower is better) Translates to: GYINLTVCACTFCLYSCAPVLAS*MMTRVL Trigger: CAGTACTCTGGTCATCATCAAACTGGCCAATACTGG...AGCACATGAATACAAACAAAATGTGCATGCACATACGGTCAAGTTAATATATCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159964.2 |
||
| CDS-3UTR CAA 90 bp | AGATTGTCCATGTGGTGCATAGAGAGAAGTATAAAATATGGAACCAAGTGTCATTCAGATAACTTCCACTaGAGTGACCCACTAAAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: RLSMWCIERSIKYGTKCHSDNFH*SDPLKH Trigger: ATGCTTTAGTGGGTCACTCAAGTGGAAGTTATCTGA...ATGACACTTGGTTCCATATTTTATACTTCTCTCTATGCACCACATGGACAATCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 |
||
| CDS-3UTR CAA 90 bp | ACTAGATTGTCCATGTGGTGCATAGAGAGAAGTATAAAATATGGAACCAAGTGTGCAAGGCTATTATATTaGATGCTCTGGGTTCAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: TRLSMWCIERSIKYGTKCARLLY*MLWVQV Trigger: GACTTGAACCCAGAGCATCAAATATAATAGCCTTGC...ACACTTGGTTCCATATTTTATACTTCTCTCTATGCACCACATGGACAATCTAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161047.8 |
||
| CDS CCA 72 bp | CTGTGTAGGGTCCCCCAGCCAGGCCGTGTAGTTCTCTaGCCACAGAGTGCAGGGAGGCCACTGGGGTGCGGA | + |
|
Preference number: 6 (lower is better) Translates to: LCRVPQPGRVVL*PQSAGRPLGCG Trigger: TCCGCACCCCAGTGGCCTCCCTGCACTCTGTGGCCAGAGAACTACACGGCCTGGCTGGGGGACCCTACACAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 |
||
| CDS GCA 72 bp | ACCCTAACTGCCTCACTGGAGTGGATCAGCCGCACTTaGACCTGGGCCCGTCCAGCCCAGAGCAGGGGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: TLTASLEWISRT*TWARPAQSRGN Trigger: GTTCCCCCTGCTCTGGGCTGGACGGGCCCAGGTGCAAGTGCGGCTGATCCACTCCAGTGAGGCAGTTAGGGT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 |
||
| CDS GCA 72 bp | CGGAGAGAACGCAGGGGCCAGCTGTGGGCCCTCCAGTaGAACACTGTCCCCCGAGTTGTCTCCACAGCCATC | + |
|
Preference number: 6 (lower is better) Translates to: RRERRGQLWALQ*NTVPRVVSTAI Trigger: GATGGCTGTGGAGACAACTCGGGGGACAGTGTTGCACTGGAGGGCCCACAGCTGGCCCCTGCGTTCTCTCCG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 |
||
| CDS CCA 72 bp | ACTGCCTCACTGGAGTGGATCAGCCGCACTTGCACCTaGGCCCGTCCAGCCCAGAGCAGGGGGAACGACAAG | + |
|
Preference number: 6 (lower is better) Translates to: TASLEWISRTCT*ARPAQSRGNDK Trigger: CTTGTCGTTCCCCCTGCTCTGGGCTGGACGGGCCCAGGTGCAAGTGCGGCTGATCCACTCCAGTGAGGCAGT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 |
||
| CDS CAA 72 bp | GACCCTAACTGCCTCACTGGAGTGGATCAGCCGCACTaGCACCTGGGCCCGTCCAGCCCAGAGCAGGGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: DPNCLTGVDQPH*HLGPSSPEQGE Trigger: TTCCCCCTGCTCTGGGCTGGACGGGCCCAGGTGCAAGTGCGGCTGATCCACTCCAGTGAGGCAGTTAGGGTC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 |
||
| CDS CAA 90 bp | CCTTTGCAGGACCCTAACTGCCTCACTGGAGTGGATCAGCCGCACTaGCACCTGGGCCCGTCCAGCCCAGAGCAGGGGGAACGACAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: PLQDPNCLTGVDQPH*HLGPSSPEQGERQE Trigger: CTCTTGTCGTTCCCCCTGCTCTGGGCTGGACGGGCCCAGGTGCAAGTGCGGCTGATCCACTCCAGTGAGGCAGTTAGGGTCCTGCAAAGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 |
||
| CDS CCA 72 bp | ATCCTTCACCTCCCCTGGGACTCCTGCTCTCAATTCTaGGCCCAGCAGCTGTGCCCGAAACAGATCTCCACC | + |
|
Preference number: 6 (lower is better) Translates to: ILHLPWDSCSQF*AQQLCPKQIST Trigger: GGTGGAGATCTGTTTCGGGCACAGCTGCTGGGCCCAGAATTGAGAGCAGGAGTCCCAGGGGAGGTGAAGGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 ENSMUST00000162519.2 |
||
| CDS CAA 72 bp | GTTTTGGAGACAGGTGGCCCGGGCTACATGGAGGCCTaGAGGGCAAGGCCATGTTACTCATGTTCCCCTGCG | + |
|
Preference number: 6 (lower is better) Translates to: VLETGGPGYMEA*RARPCYSCSPA Trigger: CGCAGGGGAACATGAGTAACATGGCCTTGCCCTCAAGGCCTCCATGTAGCCCGGGCCACCTGTCTCCAAAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 |
||
| CDS CAA 90 bp | AGCCAGAGGGTTTTGGAGACAGGTGGCCCGGGCTACATGGAGGCCTaGAGGGCAAGGCCATGTTACTCATGTTCCCCTGCGTTGCTGGTA | + |
|
Preference number: 6 (lower is better) Translates to: SQRVLETGGPGYMEA*RARPCYSCSPALLV Trigger: TACCAGCAACGCAGGGGAACATGAGTAACATGGCCTTGCCCTCAAGGCCTCCATGTAGCCCGGGCCACCTGTCTCCAAAACCCTCTGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 |
||
| CDS GCA 72 bp | GTCCAGCCCAGAGCAGGGGGAACGACAAGAGGTAAGTaGCATTCTTCAGATCCTTCACCTCCCCTGGGACTC | + |
|
Preference number: 6 (lower is better) Translates to: VQPRAGGTTRGK*HSSDPSPPLGL Trigger: GAGTCCCAGGGGAGGTGAAGGATCTGAAGAATGGCACTTACCTCTTGTCGTTCCCCCTGCTCTGGGCTGGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 ENSMUST00000162519.2 |
||
| CDS CCA 72 bp | CAGAACCAGCTCTCCCCAGAAACCACATCCTTGTACTaGCAGGTAGGCCCTTTGGCTCCAGTTGACTGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: QNQLSPETTSLY*QVGPLAPVDWG Trigger: CCCCCAGTCAACTGGAGCCAAAGGGCCTACCTGCCAGTACAAGGATGTGGTTTCTGGGGAGAGCTGGTTCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 |
||
| CDS CAA 72 bp | AGCTGTGGGCCCTCCAGTGCAACACTGTCCCCCGAGTaGTCTCCACAGCCATCAGAGGACCTACCTGATAAG | + |
|
Preference number: 6 (lower is better) Translates to: SCGPSSATLSPE*SPQPSEDLPDK Trigger: CTTATCAGGTAGGTCCTCTGATGGCTGTGGAGACAACTCGGGGGACAGTGTTGCACTGGAGGGCCCACAGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 |
||
| CDS CAA 72 bp | AGTGCCATCTGTCTTGGTAGTAGAAGCCAGAGGGTTTaGGAGACAGGTGGCCCGGGCTACATGGAGGCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: SAICLGSRSQRV*ETGGPGYMEAL Trigger: CAAGGCCTCCATGTAGCCCGGGCCACCTGTCTCCAAAACCCTCTGGCTTCTACTACCAAGACAGATGGCACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 |
||
| CDS CAA 90 bp | AGAATGTTGAGTGCCATCTGTCTTGGTAGTAGAAGCCAGAGGGTTTaGGAGACAGGTGGCCCGGGCTACATGGAGGCCTTGAGGGCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: RMLSAICLGSRSQRV*ETGGPGYMEALRAR Trigger: CCTTGCCCTCAAGGCCTCCATGTAGCCCGGGCCACCTGTCTCCAAAACCCTCTGGCTTCTACTACCAAGACAGATGGCACTCAACATTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 |
||
| CDS GCA 72 bp | ACTGCCGAAGTGTGGAATCCCCTAACATGTAGACAATaGGGCCAGCCAGGCAGTTCAGGATGCTGTCCACAG | + |
|
Preference number: 6 (lower is better) Translates to: TAEVWNPLTCRQ*GQPGSSGCCPQ Trigger: CTGTGGACAGCATCCTGAACTGCCTGGCTGGCCGCATTGTCTACATGTTAGGGGATTCCACACTTCGGCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 |
||
| CDS CCA 72 bp | AGTCGATGGATTCTGAGACATACTCAGGGACAGTGCTaGGTTGTGGGAGCCAATGGATCATGGGCTCAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: SRWILRHTQGQC*VVGANGSWAQA Trigger: GGCCTGAGCCCATGATCCATTGGCTCCCACAACCCAGCACTGTCCCTGAGTATGTCTCAGAATCCATCGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 ENSMUST00000162519.2 |
||
| CDS CCA 72 bp | TTGTACTGGCAGGTAGGCCCTTTGGCTCCAGTTGACTaGGGGTCCACGTTACAGATGACAGTCTCTAGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: LYWQVGPLAPVD*GSTLQMTVSRG Trigger: GCCTCTAGAGACTGTCATCTGTAACGTGGACCCCCAGTCAACTGGAGCCAAAGGGCCTACCTGCCAGTACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 |
||
| CDS TCA 72 bp | GAGTTCTTGAGGCAGAGAGTCCCAGTCGATGGATTCTaGGACATACTCAGGGACAGTGCTGGGTTGTGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: EFLRQRVPVDGF*DILRDSAGLWE Trigger: CTCCCACAACCCAGCACTGTCCCTGAGTATGTCTCAGAATCCATCGACTGGGACTCTCTGCCTCAAGAACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 ENSMUST00000162519.2 |
||
| CDS GCA 72 bp | CATGAAGCAGAGCACCTTTTCAGCTGTCTGCAATTCTaGTCCAGCTTCAGCTGGTGTCTGGAGGTGCTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: HEAEHLFSCLQF*SSFSWCLEVLE Trigger: CTCCAGCACCTCCAGACACCAGCTGAAGCTGGAGCAGAATTGCAGACAGCTGAAAAGGTGCTCTGCTTCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159964.2 |
||
| CDS CCA 72 bp | GGTTGGGGAGTTCTTGAGGCAGAGAGTCCCAGTCGATaGATTCTGAGACATACTCAGGGACAGTGCTGGGTT | + |
|
Preference number: 6 (lower is better) Translates to: GWGVLEAESPSR*ILRHTQGQCWV Trigger: AACCCAGCACTGTCCCTGAGTATGTCTCAGAATCCATCGACTGGGACTCTCTGCCTCAAGAACTCCCCAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 ENSMUST00000162519.2 |
||
| CDS CAA 90 bp | ATGGAGGCCTTGAGGGCAAGGCCATGTTACTCATGTTCCCCTGCGTaGCTGGTAAGACCAGGATTGGAGGTACACCTGAAGGGAGTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: MEALRARPCYSCSPA*LVRPGLEVHLKGVS Trigger: AGAAACTCCCTTCAGGTGTACCTCCAATCCTGGTCTTACCAGCAACGCAGGGGAACATGAGTAACATGGCCTTGCCCTCAAGGCCTCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 |
||
| CDS TCA 72 bp | CTTTGGCTCCAGTTGACTGGGGGTCCACGTTACAGATaGCAGTCTCTAGAGGCCCATCTGTTCCTCGGAAAT | + |
|
Preference number: 6 (lower is better) Translates to: LWLQLTGGPRYR*QSLEAHLFLGN Trigger: ATTTCCGAGGAACAGATGGGCCTCTAGAGACTGTCATCTGTAACGTGGACCCCCAGTCAACTGGAGCCAAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 |
||
| CDS GCA 72 bp | CAAGGCATCATGAAGCAGAGCACCTTTTCAGCTGTCTaGAATTCTGCTCCAGCTTCAGCTGGTGTCTGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: QGIMKQSTFSAV*NSAPASAGVWR Trigger: CCTCCAGACACCAGCTGAAGCTGGAGCAGAATTGCAGACAGCTGAAAAGGTGCTCTGCTTCATGATGCCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159964.2 |
||
| CDS CCA 72 bp | AAGACCAGGATTGGAGGTACACCTGAAGGGAGTTTCTaGTCAGTCACATTCCCAGCCAGCAGGGCTTCATCA | + |
|
Preference number: 6 (lower is better) Translates to: KTRIGGTPEGSF*SVTFPASRASS Trigger: TGATGAAGCCCTGCTGGCTGGGAATGTGACTGACCAGAAACTCCCTTCAGGTGTACCTCCAATCCTGGTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 |
||
| CDS CAA 72 bp | TTGAGGGCAAGGCCATGTTACTCATGTTCCCCTGCGTaGCTGGTAAGACCAGGATTGGAGGTACACCTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: LRARPCYSCSPA*LVRPGLEVHLK Trigger: CTTCAGGTGTACCTCCAATCCTGGTCTTACCAGCAACGCAGGGGAACATGAGTAACATGGCCTTGCCCTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 |
||
| CDS CAA 72 bp | GTTTTGGAGACAGGTGGCCCGGGCTACATGGAGGCCTaGAGGGCAAGGCTATTATATTTGATGCTCTGGGTT | + |
|
Preference number: 6 (lower is better) Translates to: VLETGGPGYMEA*RARLLYLMLWV Trigger: AACCCAGAGCATCAAATATAATAGCCTTGCCCTCAAGGCCTCCATGTAGCCCGGGCCACCTGTCTCCAAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161047.8 |
||
| CDS TCA 72 bp | GTCCACAGTGGGGAAAGAGCGACTAGAACAGAATGTTaGGTGCCATCTGTCTTGGTAGTAGAAGCCAGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: VHSGERATRTEC*VPSVLVVEARG Trigger: CCCTCTGGCTTCTACTACCAAGACAGATGGCACTCAACATTCTGTTCTAGTCGCTCTTTCCCCACTGTGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 |
||
| CDS TCA 72 bp | TTGTCTCCACAGCCATCAGAGGACCTACCTGATAAGTaGCATGTAGATCAACTGGCTTCAGGGAGGGCACTG | + |
|
Preference number: 6 (lower is better) Translates to: LSPQPSEDLPDK*HVDQLASGRAL Trigger: CAGTGCCCTCCCTGAAGCCAGTTGATCTACATGTCACTTATCAGGTAGGTCCTCTGATGGCTGTGGAGACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 |
||
| CDS CCA 72 bp | TCACATTCCCAGCCAGCAGGGCTTCATCATGTGACGTaGTCACCTTCAGATAACTTCCACTTGAGTGACCCA | + |
|
Preference number: 6 (lower is better) Translates to: SHSQPAGLHHVT*SPSDNFHLSDP Trigger: TGGGTCACTCAAGTGGAAGTTATCTGAAGGTGACCACGTCACATGATGAAGCCCTGCTGGCTGGGAATGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 |
||
| CDS CAA 72 bp | TACTCATGTTCCCCTGCGTTGCTGGTAAGACCAGGATaGGAGGTACACCTGAAGGGAGTTTCTGGTCAGTCA | + |
|
Preference number: 6 (lower is better) Translates to: YSCSPALLVRPG*EVHLKGVSGQS Trigger: TGACTGACCAGAAACTCCCTTCAGGTGTACCTCCAATCCTGGTCTTACCAGCAACGCAGGGGAACATGAGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 |
||
| CDS CAA 90 bp | GGTGGCCCGGGCTACATGGAGGCCTTGAGGGCAAGGCTATTATATTaGATGCTCTGGGTTCAAGTCTTAGCACTGAATAAACCAGCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: GGPGYMEALRARLLY*MLWVQVLALNKPAL Trigger: CAAAGCTGGTTTATTCAGTGCTAAGACTTGAACCCAGAGCATCAAATATAATAGCCTTGCCCTCAAGGCCTCCATGTAGCCCGGGCCACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161047.8 |
||
| CDS CAA 90 bp | TATTTGATGCTCTGGGTTCAAGTCTTAGCACTGAATAAACCAGCTTaGTCAGCTTCTGGCCCATGTTACTCATGTTCCCCTGCGTTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: YLMLWVQVLALNKPA*SASGPCYSCSPALL Trigger: CAGCAACGCAGGGGAACATGAGTAACATGGGCCAGAAGCTGACAAAGCTGGTTTATTCAGTGCTAAGACTTGAACCCAGAGCATCAAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161047.8 |
||
| CDS CAA 72 bp | ACTTCATTGCGGACAATAAGCTTCCTTGGGTGGATGTaGTCTGGCACATTCAAGGTGGAGGTCATTTCCCAT | + |
|
Preference number: 6 (lower is better) Translates to: TSLRTISFLGWM*SGTFKVEVISH Trigger: ATGGGAAATGACCTCCACCTTGAATGTGCCAGACAACATCCACCCAAGGAAGCTTATTGTCCGCAATGAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 |
||
| CDS CAA 72 bp | CTCTGGGTTCAAGTCTTAGCACTGAATAAACCAGCTTaGTCAGCTTCTGGCCCATGTTACTCATGTTCCCCT | + |
|
Preference number: 6 (lower is better) Translates to: LWVQVLALNKPA*SASGPCYSCSP Trigger: AGGGGAACATGAGTAACATGGGCCAGAAGCTGACAAAGCTGGTTTATTCAGTGCTAAGACTTGAACCCAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161047.8 |
||
| CDS CAA 90 bp | AATAATTCCACTTCATTGCGGACAATAAGCTTCCTTGGGTGGATGTaGTCTGGCACATTCAAGGTGGAGGTCATTTCCCATGCATCCACA | + |
|
Preference number: 6 (lower is better) Translates to: NNSTSLRTISFLGWM*SGTFKVEVISHAST Trigger: TGTGGATGCATGGGAAATGACCTCCACCTTGAATGTGCCAGACAACATCCACCCAAGGAAGCTTATTGTCCGCAATGAAGTGGAATTATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 |
||
| CDS CCA 72 bp | GAGGCCTTGAGGGCAAGGCTATTATATTTGATGCTCTaGGTTCAAGTCTTAGCACTGAATAAACCAGCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: EALRARLLYLML*VQVLALNKPAL Trigger: CAAAGCTGGTTTATTCAGTGCTAAGACTTGAACCCAGAGCATCAAATATAATAGCCTTGCCCTCAAGGCCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161047.8 |
||
| CDS CAA 72 bp | GGCTACATGGAGGCCTTGAGGGCAAGGCTATTATATTaGATGCTCTGGGTTCAAGTCTTAGCACTGAATAAA | + |
|
Preference number: 6 (lower is better) Translates to: GYMEALRARLLY*MLWVQVLALNK Trigger: TTTATTCAGTGCTAAGACTTGAACCCAGAGCATCAAATATAATAGCCTTGCCCTCAAGGCCTCCATGTAGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161047.8 |
||
| CDS CAA 72 bp | GTGGAACAGATGAAGGACAGAAATAATTCCACTTCATaGCGGACAATAAGCTTCCTTGGGTGGATGTTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: VEQMKDRNNSTS*RTISFLGWMLS Trigger: AGACAACATCCACCCAAGGAAGCTTATTGTCCGCAATGAAGTGGAATTATTTCTGTCCTTCATCTGTTCCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110929.9 ENSMUST00000159798.8 ENSMUST00000159964.2 ENSMUST00000161047.8 |
||