Pregenerated sensors for NXPE4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044229Ensembl transcript IDs: ENSMUST00000093853.5, ENSMUST00000215780.2, ENSMUST00000216998.2
Found 190 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AAATATGCAGTGTGCGGTCACAGTGCTGTGTACTGTGCTGTGTACTaGCATAGCAGGGAAGGGCTGGGCTGGAAATCTTCAGCCAATGAC | + |
|
Preference number: 1 (lower is better) Translates to: KYAVCGHSAVYCAVY*HSREGLGWKSSAND Trigger: GTCATTGGCTGAAGATTTCCAGCCCAGCCCTTCCCTGCTATGGCAGTACACAGCACAGTACACAGCACTGTGACCGCACACTGCATATTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216998.2 |
||
| 3UTR CCA 90 bp | TTTTGCCACTGGATGCTGATTTTCTCATCCAAGTCCACGGCAAGTTaGTGTTGCAGTTTCCCACTCTCATGCAGGTCCACGGACCTCAGT | + |
|
Preference number: 1 (lower is better) Translates to: FCHWMLIFSSKSTAS*CCSFPLSCRSTDLS Trigger: ACTGAGGTCCGTGGACCTGCATGAGAGTGGGAAACTGCAACACCAACTTGCCGTGGACTTGGATGAGAAAATCAGCATCCAGTGGCAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216998.2 |
||
| 3UTR GCA 90 bp | CAGCAAACTCTTCTCCCACTACAGCTTCTGAGAAAATATGCAGTGTaGGGTCACAGTGCTGTGTACTGTGCTGTGTACTGCCATAGCAGG | + |
|
Preference number: 1 (lower is better) Translates to: QQTLLPLQLLRKYAV*GHSAVYCAVYCHSR Trigger: CCTGCTATGGCAGTACACAGCACAGTACACAGCACTGTGACCGCACACTGCATATTTTCTCAGAAGCTGTAGTGGGAGAAGAGTTTGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216998.2 |
||
| 3UTR GCA 90 bp | ATCGGAACAGCAAACTCTTCTCCCACTACAGCTTCTGAGAAAATATaGAGTGTGCGGTCACAGTGCTGTGTACTGTGCTGTGTACTGCCA | + |
|
Preference number: 1 (lower is better) Translates to: IGTANSSPTTASEKI*SVRSQCCVLCCVLP Trigger: TGGCAGTACACAGCACAGTACACAGCACTGTGACCGCACACTGCATATTTTCTCAGAAGCTGTAGTGGGAGAAGAGTTTGCTGTTCCGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216998.2 |
||
| 3UTR GCA 90 bp | AGAACGTCACGAGGAGCTGACTGTCATGGTCTAACATGTCCTCTCTaGTGGCAATACTTTTGTAACTTAGAGCCCAAGCCCTACCAAGTT | + |
|
Preference number: 1 (lower is better) Translates to: RTSRGADCHGLTCPL*WQYFCNLEPKPYQV Trigger: AACTTGGTAGGGCTTGGGCTCTAAGTTACAAAAGTATTGCCAGCAGAGAGGACATGTTAGACCATGACAGTCAGCTCCTCGTGACGTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216998.2 |
||
| 3UTR CCA 90 bp | TTAAATATTGGAGACCACAAGATGGGCCTTATATCAAGGCCAGTATaGAGACATAGGCTCAACCTTGCATTCAGTGACAAGAGCCAGGGC | + |
|
Preference number: 1 (lower is better) Translates to: LNIGDHKMGLISRPV*RHRLNLAFSDKSQG Trigger: GCCCTGGCTCTTGTCACTGAATGCAAGGTTGAGCCTATGTCTCCATACTGGCCTTGATATAAGGCCCATCTTGTGGTCTCCAATATTTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216998.2 |
||
| 3UTR TCA 90 bp | TTCGCTTTTCCAAAGCACACCCTGGCTACAGAATTTAATGTTGCATaGAATATACGAGAGGTGTCTTCCCACTACAGCAGCTGTGCTGAG | + |
|
Preference number: 1 (lower is better) Translates to: FAFPKHTLATEFNVA*NIREVSSHYSSCAE Trigger: CTCAGCACAGCTGCTGTAGTGGGAAGACACCTCTCGTATATTTCATGCAACATTAAATTCTGTAGCCAGGGTGTGCTTTGGAAAAGCGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216998.2 |
||
| 3UTR CCA 90 bp | ATGGACCATAATACAGATTATGTCCTTGGAGTAACTGGGGCATCCTaGCACTTGGCACAGCTGCAGGAGTCACTGTATCTTTTAAGTTCA | + |
|
Preference number: 1 (lower is better) Translates to: MDHNTDYVLGVTGAS*HLAQLQESLYLLSS Trigger: TGAACTTAAAAGATACAGTGACTCCTGCAGCTGTGCCAAGTGCCAGGATGCCCCAGTTACTCCAAGGACATAATCTGTATTATGGTCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 ENSMUST00000216998.2 |
||
| 3UTR TCA 90 bp | CTAGGGTTCTTACAGCAAGAGTCTAGCTCCAACTCTACACTATTGTaGTCAGAGTTCCAATGGCTGTTGCTTTCTGACACTTCCTATGTG | + |
|
Preference number: 1 (lower is better) Translates to: LGFLQQESSSNSTLL*SEFQWLLLSDTSYV Trigger: CACATAGGAAGTGTCAGAAAGCAACAGCCATTGGAACTCTGATCACAATAGTGTAGAGTTGGAGCTAGACTCTTGCTGTAAGAACCCTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216998.2 |
||
| 3UTR TCA 90 bp | CAACTCTACACTATTGTGATCAGAGTTCCAATGGCTGTTGCTTTCTaGCACTTCCTATGTGTTAGTGTGCCTGACAGTGTCTTAAATACT | + |
|
Preference number: 1 (lower is better) Translates to: QLYTIVIRVPMAVAF*HFLCVSVPDSVLNT Trigger: AGTATTTAAGACACTGTCAGGCACACTAACACATAGGAAGTGTCAGAAAGCAACAGCCATTGGAACTCTGATCACAATAGTGTAGAGTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216998.2 |
||
| 3UTR TCA 90 bp | AATTATCCGTGCAATGTTCTCTATTTCTTTGACAGAGTAGACCAATaGCCCGATAAGAGGGTAACCATGTTTTTGCCACTGGATGCTGAT | + |
|
Preference number: 1 (lower is better) Translates to: NYPCNVLYFFDRVDQ*PDKRVTMFLPLDAD Trigger: ATCAGCATCCAGTGGCAAAAACATGGTTACCCTCTTATCGGGTCATTGGTCTACTCTGTCAAAGAAATAGAGAACATTGCACGGATAATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216998.2 |
||
| 3UTR CCA 90 bp | TCATTGCTTCCCACTAACTTCAGTTCGCTTTTCCAAAGCACACCCTaGCTACAGAATTTAATGTTGCATGAAATATACGAGAGGTGTCTT | + |
|
Preference number: 1 (lower is better) Translates to: SLLPTNFSSLFQSTP*LQNLMLHEIYERCL Trigger: AAGACACCTCTCGTATATTTCATGCAACATTAAATTCTGTAGCCAGGGTGTGCTTTGGAAAAGCGAACTGAAGTTAGTGGGAAGCAATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216998.2 |
||
| 3UTR CCA 90 bp | TATAGTTACAAAGATCAATTAGCCACAAACACAGGAGTAAAGTGCTaGTGTTTCGAGTCTATAAACTTACCATATCTGACTAAGGAGTGG | + |
|
Preference number: 1 (lower is better) Translates to: YSYKDQLATNTGVKC*CFESINLPYLTKEW Trigger: CCACTCCTTAGTCAGATATGGTAAGTTTATAGACTCGAAACACCAGCACTTTACTCCTGTGTTTGTGGCTAATTGATCTTTGTAACTATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216998.2 |
||
| 3UTR GCA 90 bp | GAATATAGTTACAAAGATCAATTAGCCACAAACACAGGAGTAAAGTaGTGGTGTTTCGAGTCTATAAACTTACCATATCTGACTAAGGAG | + |
|
Preference number: 1 (lower is better) Translates to: EYSYKDQLATNTGVK*WCFESINLPYLTKE Trigger: CTCCTTAGTCAGATATGGTAAGTTTATAGACTCGAAACACCAGCACTTTACTCCTGTGTTTGTGGCTAATTGATCTTTGTAACTATATTC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216998.2 |
||
| 3UTR CAA 90 bp | TTTTTGCCACTGGATGCTGATTTTCTCATCCAAGTCCACGGCAAGTaGGTGTTGCAGTTTCCCACTCTCATGCAGGTCCACGGACCTCAG | + |
|
Preference number: 2 (lower is better) Translates to: FLPLDADFLIQVHGK*VLQFPTLMQVHGPQ Trigger: CTGAGGTCCGTGGACCTGCATGAGAGTGGGAAACTGCAACACCAACTTGCCGTGGACTTGGATGAGAAAATCAGCATCCAGTGGCAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216998.2 |
||
| 3UTR-3UTR CCA 90 bp | AAGAGATTGAAGCAGTTATTAAAAGTCTCTCTCCAAAACAGCCCAGACCTGGACGGGCATCCTGGCACTTaGCACAGCTGCAGGAGTCAC | + |
|
Preference number: 2 (lower is better) Translates to: KRLKQLLKVSLQNSPDLDGHPGT*HSCRSH Trigger: GTGACTCCTGCAGCTGTGCCAAGTGCCAGGATGCCC...GTCCAGGTCTGGGCTGTTTTGGAGAGAGACTTTTAATAACTGCTTCAATCTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093853.5 ENSMUST00000216998.2 |
||
| 3UTR-3UTR CCA 90 bp | TACTTCATTGTTCTGAACTCACAGCAACAAGGAGAAGGTCTTAGGCACAGGAATGGGCATCCTGGCACTTaGCACAGCTGCAGGAGTCAC | + |
|
Preference number: 2 (lower is better) Translates to: YFIVLNSQQQGEGLRHRNGHPGT*HSCRSH Trigger: GTGACTCCTGCAGCTGTGCCAAGTGCCAGGATGCCC...ATTCCTGTGCCTAAGACCTTCTCCTTGTTGCTGTGAGTTCAGAACAATGAAGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 ENSMUST00000216998.2 |
||
| 3UTR-3UTR CCA 90 bp | GAGCCCAAGCCCTACCAAGTTCACCTTTCCCTTGAGAGGATCAGTTTATTAAATGTAACTGGGGCATCCTaGCACTTGGCACAGCTGCAG | + |
|
Preference number: 2 (lower is better) Translates to: EPKPYQVHLSLERISLLNVTGAS*HLAQLQ Trigger: CTGCAGCTGTGCCAAGTGCCAGGATGCCCCAGTTAC...ATTTAATAAACTGATCCTCTCAAGGGAAAGGTGAACTTGGTAGGGCTTGGGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216998.2 |
||
| 3UTR-3UTR CCA 90 bp | AGCAAAGAGATTGAAGCAGTTATTAAAAGTCTCTCTCCAAAACAGCCCAGACCTGTAACTGGGGCATCCTaGCACTTGGCACAGCTGCAG | + |
|
Preference number: 2 (lower is better) Translates to: SKEIEAVIKSLSPKQPRPVTGAS*HLAQLQ Trigger: CTGCAGCTGTGCCAAGTGCCAGGATGCCCCAGTTAC...AGGTCTGGGCTGTTTTGGAGAGAGACTTTTAATAACTGCTTCAATCTCTTTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000093853.5 ENSMUST00000216998.2 |
||
| 3UTR-3UTR TCA 90 bp | GACCATAATACAGATTATGTCCTTGGAGTAACTGGGGCATCCTGGCACTTGGCATTTGGGCTTCAATTTTaGGCAGAAGGGCAGTGTATG | + |
|
Preference number: 2 (lower is better) Translates to: DHNTDYVLGVTGASWHLAFGLQF*AEGQCM Trigger: CATACACTGCCCTTCTGCTCAAAATTGAAGCCCAAA...TGCCAAGTGCCAGGATGCCCCAGTTACTCCAAGGACATAATCTGTATTATGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 ENSMUST00000216998.2 |
||
| 3UTR-3UTR TCA 90 bp | AGCAAAGAGATTGAAGCAGTTATTAAAAGTCTCTCTCCAAAACAGCCCAGACCTCAACCTTGCATTCAGTaGCAAGAGCCAGGGCCCAGA | + |
|
Preference number: 2 (lower is better) Translates to: SKEIEAVIKSLSPKQPRPQPCIQ*QEPGPR Trigger: TCTGGGCCCTGGCTCTTGTCACTGAATGCAAGGTTG...AGGTCTGGGCTGTTTTGGAGAGAGACTTTTAATAACTGCTTCAATCTCTTTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216998.2 |
||
| 3UTR-3UTR GCA 90 bp | GACCATAATACAGATTATGTCCTTGGAGTAACTGGGGCATCCTGGCACTTGGCAAGAAAATATGCAGTGTaGGGTCACAGTGCTGTGTAC | + |
|
Preference number: 2 (lower is better) Translates to: DHNTDYVLGVTGASWHLARKYAV*GHSAVY Trigger: GTACACAGCACTGTGACCGCACACTGCATATTTTCT...TGCCAAGTGCCAGGATGCCCCAGTTACTCCAAGGACATAATCTGTATTATGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216998.2 |
||
| 3UTR CAA 90 bp | TTCAGTTCGCTTTTCCAAAGCACACCCTGGCTACAGAATTTAATGTaGCATGAAATATACGAGAGGTGTCTTCCCACTACAGCAGCTGTG | + |
|
Preference number: 2 (lower is better) Translates to: FSSLFQSTPWLQNLM*HEIYERCLPTTAAV Trigger: CACAGCTGCTGTAGTGGGAAGACACCTCTCGTATATTTCATGCAACATTAAATTCTGTAGCCAGGGTGTGCTTTGGAAAAGCGAACTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216998.2 |
||
| 3UTR-3UTR TCA 90 bp | GACCATAATACAGATTATGTCCTTGGAGTAACTGGGGCATCCTGGCACTTGGCAATTACTTCATTGTTCTaGACTCACAGCAACAAGGAG | + |
|
Preference number: 2 (lower is better) Translates to: DHNTDYVLGVTGASWHLAITSLF*THSNKE Trigger: CTCCTTGTTGCTGTGAGTTCAGAACAATGAAGTAAT...TGCCAAGTGCCAGGATGCCCCAGTTACTCCAAGGACATAATCTGTATTATGGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 ENSMUST00000216998.2 |
||
| 3UTR-3UTR GCA 90 bp | ATTTGCTTCAATGATATTCATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGCTTCTGAGAAAATATaGAGTGTGCGGTCACAGTGC | + |
|
Preference number: 2 (lower is better) Translates to: ICFNDIHVCVCVCVCVCVASEKI*SVRSQC Trigger: GCACTGTGACCGCACACTGCATATTTTCTCAGAAGC...CACACACACACACACACACACACACACACACACATGAATATCATTGAAGCAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216998.2 |
||
| 3UTR-3UTR TCA 90 bp | TACTTCATTGTTCTGAACTCACAGCAACAAGGAGAAGGTCTTAGGCACAGGAATAATGCCTTGTTAAGATaGAGTAGGTGGACCATATGG | + |
|
Preference number: 2 (lower is better) Translates to: YFIVLNSQQQGEGLRHRNNALLR*SRWTIW Trigger: CCATATGGTCCACCTACTTCATCTTAACAAGGCATT...ATTCCTGTGCCTAAGACCTTCTCCTTGTTGCTGTGAGTTCAGAACAATGAAGTA 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 ENSMUST00000216998.2 |
||
| 3UTR-3UTR TCA 90 bp | TTCAATGATATTCATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGAACTCTACACTATTGTaGTCAGAGTTCCAATGGCTG | + |
|
Preference number: 2 (lower is better) Translates to: FNDIHVCVCVCVCVCVCLNSTLL*SEFQWL Trigger: CAGCCATTGGAACTCTGATCACAATAGTGTAGAGTT...CAGACACACACACACACACACACACACACACACACACACATGAATATCATTGAA 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216998.2 |
||
| 3UTR-3UTR CCA 90 bp | TCGCTTTTCCAAAGCACACCCTGGCTACAGAATTTAATGTTGCATGAAATATACTTGGAGACCACAAGATaGGCCTTATATCAAGGCCAG | + |
|
Preference number: 2 (lower is better) Translates to: SLFQSTPWLQNLMLHEIYLETTR*ALYQGQ Trigger: CTGGCCTTGATATAAGGCCCATCTTGTGGTCTCCAA...GTATATTTCATGCAACATTAAATTCTGTAGCCAGGGTGTGCTTTGGAAAAGCGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216998.2 |
||
| 3UTR-3UTR TCA 90 bp | AGCAAAGAGATTGAAGCAGTTATTAAAAGTCTCTCTCCAAAACAGCCCAGACCTATGTGGACCTTCCATTaGCTCTTTTGGGCTTCAATT | + |
|
Preference number: 2 (lower is better) Translates to: SKEIEAVIKSLSPKQPRPMWTFH*LFWASI Trigger: AATTGAAGCCCAAAAGAGTCAATGGAAGGTCCACAT...AGGTCTGGGCTGTTTTGGAGAGAGACTTTTAATAACTGCTTCAATCTCTTTGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000093853.5 ENSMUST00000216998.2 |
||
| 3UTR-3UTR TCA 90 bp | AAAGAGATTGAAGCAGTTATTAAAAGTCTCTCTCCAAAACAGCCCAGACCTGGAATGGCTGTTGCTTTCTaGCACTTCCTATGTGTTAGT | + |
|
Preference number: 2 (lower is better) Translates to: KEIEAVIKSLSPKQPRPGMAVAF*HFLCVS Trigger: ACTAACACATAGGAAGTGTCAGAAAGCAACAGCCAT...TCCAGGTCTGGGCTGTTTTGGAGAGAGACTTTTAATAACTGCTTCAATCTCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216998.2 |
||
| 3UTR CAA 90 bp | TTTGCCCTTCTTCAGTCATTCAGACTGGATTATATGGGAATGACTTaGGCATTTAATTCTGCTTCCCTGGAAGATGATGTGAACAGTTGT | + |
|
Preference number: 2 (lower is better) Translates to: FALLQSFRLDYMGMT*AFNSASLEDDVNSC Trigger: ACAACTGTTCACATCATCTTCCAGGGAAGCAGAATTAAATGCCAAAGTCATTCCCATATAATCCAGTCTGAATGACTGAAGAAGGGCAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216998.2 |
||
| 3UTR-3UTR TCA 90 bp | ACACGTCTCAAAACCTTCCACAAATTACAACCAGGAGAAATACAACCCAAGTCAATTACTTCATTGTTCTaGACTCACAGCAACAAGGAG | + |
|
Preference number: 2 (lower is better) Translates to: TRLKTFHKLQPGEIQPKSITSLF*THSNKE Trigger: CTCCTTGTTGCTGTGAGTTCAGAACAATGAAGTAAT...TGACTTGGGTTGTATTTCTCCTGGTTGTAATTTGTGGAAGGTTTTGAGACGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093853.5 ENSMUST00000216998.2 |
||
| 3UTR-3UTR TCA 90 bp | AAGAGATTGAAGCAGTTATTAAAAGTCTCTCTCCAAAACAGCCCAGACCTGGACTCAAACTCTGAGATATaGCCAAGAAAGTACAGATCA | + |
|
Preference number: 2 (lower is better) Translates to: KRLKQLLKVSLQNSPDLDSNSEI*PRKYRS Trigger: TGATCTGTACTTTCTTGGTCATATCTCAGAGTTTGA...GTCCAGGTCTGGGCTGTTTTGGAGAGAGACTTTTAATAACTGCTTCAATCTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093853.5 ENSMUST00000216998.2 |
||
| 3UTR-3UTR GCA 90 bp | ATTTGCTTCAATGATATTCATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGGTATCAAACTATaGGATGGTAAAGGTAGTCAC | + |
|
Preference number: 2 (lower is better) Translates to: ICFNDIHVCVCVCVCVCVYGIKL*DGKGSH Trigger: GTGACTACCTTTACCATCGCATAGTTTGATACCATA...CACACACACACACACACACACACACACACACACATGAATATCATTGAAGCAAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216998.2 |
||
| 3UTR-3UTR CCA 90 bp | AAAGAGATTGAAGCAGTTATTAAAAGTCTCTCTCCAAAACAGCCCAGACCTGGAAAGGAAAAGAAACTATaGTATCAAACTATGCGATGG | + |
|
Preference number: 2 (lower is better) Translates to: KEIEAVIKSLSPKQPRPGKEKKL*YQTMRW Trigger: CCATCGCATAGTTTGATACCATAGTTTCTTTTCCTT...TCCAGGTCTGGGCTGTTTTGGAGAGAGACTTTTAATAACTGCTTCAATCTCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000216998.2 |
||
| 3UTR CAA 90 bp | ATACAATCCCTCATTTGTGATGTCTTTACAAAGCATTTGTTTAGATaGATGCAGCCATTTGCTTCAATGATATTCATGTGTGTGTGTGTG | + |
|
Preference number: 2 (lower is better) Translates to: IQSLICDVFTKHLFR*MQPFASMIFMCVCV Trigger: CACACACACACACATGAATATCATTGAAGCAAATGGCTGCATCAATCTAAACAAATGCTTTGTAAAGACATCACAAATGAGGGATTGTAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216998.2 |
||
| 3UTR CAA 90 bp | GGGACAGTAATACAATCCCTCATTTGTGATGTCTTTACAAAGCATTaGTTTAGATTGATGCAGCCATTTGCTTCAATGATATTCATGTGT | + |
|
Preference number: 2 (lower is better) Translates to: GTVIQSLICDVFTKH*FRLMQPFASMIFMC Trigger: ACACATGAATATCATTGAAGCAAATGGCTGCATCAATCTAAACAAATGCTTTGTAAAGACATCACAAATGAGGGATTGTATTACTGTCCC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216998.2 |
||
| 3UTR GCA 72 bp | GTGTGCGGTCACAGTGCTGTGTACTGTGCTGTGTACTaGCATAGCAGGGAAGGGCTGGGCTGGAAATCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: VCGHSAVYCAVY*HSREGLGWKSS Trigger: TGAAGATTTCCAGCCCAGCCCTTCCCTGCTATGGCAGTACACAGCACAGTACACAGCACTGTGACCGCACAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216998.2 |
||
| 3UTR GCA 72 bp | TCCACGGCAAGTTGGTGTTGCAGTTTCCCACTCTCATaGAGGTCCACGGACCTCAGTGCTGACAGCAAACAG | + |
|
Preference number: 3 (lower is better) Translates to: STASWCCSFPLS*RSTDLSADSKQ Trigger: CTGTTTGCTGTCAGCACTGAGGTCCGTGGACCTGCATGAGAGTGGGAAACTGCAACACCAACTTGCCGTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216998.2 |
||
| 3UTR CCA 72 bp | TGTACTGTGCTGTGTACTGCCATAGCAGGGAAGGGCTaGGCTGGAAATCTTCAGCCAATGACCGAGGCTACA | + |
|
Preference number: 3 (lower is better) Translates to: CTVLCTAIAGKG*AGNLQPMTEAT Trigger: TGTAGCCTCGGTCATTGGCTGAAGATTTCCAGCCCAGCCCTTCCCTGCTATGGCAGTACACAGCACAGTACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216998.2 |
||
| 3UTR GCA 72 bp | CTGATTTTCTCATCCAAGTCCACGGCAAGTTGGTGTTaGAGTTTCCCACTCTCATGCAGGTCCACGGACCTC | + |
|
Preference number: 3 (lower is better) Translates to: LIFSSKSTASWC*SFPLSCRSTDL Trigger: GAGGTCCGTGGACCTGCATGAGAGTGGGAAACTGCAACACCAACTTGCCGTGGACTTGGATGAGAAAATCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216998.2 |
||
| 3UTR-3UTR CAA 90 bp | TACTTCATTGTTCTGAACTCACAGCAACAAGGAGAAGGTCTTAGGCACAGGAATGGGGCATCCTGGCACTaGGCACAGCTGCAGGAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: YFIVLNSQQQGEGLRHRNGASWH*AQLQES Trigger: TGACTCCTGCAGCTGTGCCAAGTGCCAGGATGCCCC...ATTCCTGTGCCTAAGACCTTCTCCTTGTTGCTGTGAGTTCAGAACAATGAAGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 ENSMUST00000216998.2 |
||
| 3UTR-3UTR CAA 90 bp | AACACGTCTCAAAACCTTCCACAAATTACAACCAGGAGAAATACAACCCAAGTCGGGGCATCCTGGCACTaGGCACAGCTGCAGGAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: NTSQNLPQITTRRNTTQVGASWH*AQLQES Trigger: TGACTCCTGCAGCTGTGCCAAGTGCCAGGATGCCCC...GACTTGGGTTGTATTTCTCCTGGTTGTAATTTGTGGAAGGTTTTGAGACGTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093853.5 ENSMUST00000216998.2 |
||
| 3UTR GCA 72 bp | CGAGGAGCTGACTGTCATGGTCTAACATGTCCTCTCTaGTGGCAATACTTTTGTAACTTAGAGCCCAAGCCC | + |
|
Preference number: 3 (lower is better) Translates to: RGADCHGLTCPL*WQYFCNLEPKP Trigger: GGGCTTGGGCTCTAAGTTACAAAAGTATTGCCAGCAGAGAGGACATGTTAGACCATGACAGTCAGCTCCTCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216998.2 |
||
| 3UTR GCA 72 bp | GCAAACTCTTCTCCCACTACAGCTTCTGAGAAAATATaGAGTGTGCGGTCACAGTGCTGTGTACTGTGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: ANSSPTTASEKI*SVRSQCCVLCC Trigger: ACAGCACAGTACACAGCACTGTGACCGCACACTGCATATTTTCTCAGAAGCTGTAGTGGGAGAAGAGTTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216998.2 |
||
| 3UTR GCA 72 bp | GAACAGGACAAGACAAAGTCCTACTGTGTTTCACTGTaGCAACCAGATCCCCCATCGGAACAGCAAACTCTT | + |
|
Preference number: 3 (lower is better) Translates to: EQDKTKSYCVSL*QPDPPSEQQTL Trigger: AAGAGTTTGCTGTTCCGATGGGGGATCTGGTTGGCACAGTGAAACACAGTAGGACTTTGTCTTGTCCTGTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216998.2 |
||
| 3UTR CCA 72 bp | GGAGCTGACTGTCATGGTCTAACATGTCCTCTCTGCTaGCAATACTTTTGTAACTTAGAGCCCAAGCCCTAC | + |
|
Preference number: 3 (lower is better) Translates to: GADCHGLTCPLC*QYFCNLEPKPY Trigger: GTAGGGCTTGGGCTCTAAGTTACAAAAGTATTGCCAGCAGAGAGGACATGTTAGACCATGACAGTCAGCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216998.2 |
||
| 3UTR-3UTR CAA 90 bp | GACCATAATACAGATTATGTCCTTGGAGTAACTGGGGCATCCTGGCACTTGGCAGAGTTCCAATGGCTGTaGCTTTCTGACACTTCCTAT | + |
|
Preference number: 3 (lower is better) Translates to: DHNTDYVLGVTGASWHLAEFQWL*LSDTSY Trigger: ATAGGAAGTGTCAGAAAGCAACAGCCATTGGAACTC...TGCCAAGTGCCAGGATGCCCCAGTTACTCCAAGGACATAATCTGTATTATGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216998.2 |
||
| 3UTR-3UTR CAA 90 bp | GACCATAATACAGATTATGTCCTTGGAGTAACTGGGGCATCCTGGCACTTGGCAAGAGTCTCAATTTTGTaGCTGAGAGAACGTCACGAG | + |
|
Preference number: 3 (lower is better) Translates to: DHNTDYVLGVTGASWHLARVSIL*LRERHE Trigger: CTCGTGACGTTCTCTCAGCAACAAAATTGAGACTCT...TGCCAAGTGCCAGGATGCCCCAGTTACTCCAAGGACATAATCTGTATTATGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216998.2 |
||
| 3UTR TCA 72 bp | CCAAAGCACACCCTGGCTACAGAATTTAATGTTGCATaGAATATACGAGAGGTGTCTTCCCACTACAGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: PKHTLATEFNVA*NIREVSSHYSS Trigger: GCTGCTGTAGTGGGAAGACACCTCTCGTATATTTCATGCAACATTAAATTCTGTAGCCAGGGTGTGCTTTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216998.2 |
||
| 3UTR TCA 72 bp | TGTGGACCTTCCATTGACTCTTTTGGGCTTCAATTTTaGGCAGAAGGGCAGTGTATGAATGCCTTGTTAAGA | + |
|
Preference number: 3 (lower is better) Translates to: CGPSIDSFGLQF*AEGQCMNALLR Trigger: TCTTAACAAGGCATTCATACACTGCCCTTCTGCTCAAAATTGAAGCCCAAAAGAGTCAATGGAAGGTCCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 ENSMUST00000216998.2 |
||
| 3UTR TCA 72 bp | TTACAGCAAGAGTCTAGCTCCAACTCTACACTATTGTaGTCAGAGTTCCAATGGCTGTTGCTTTCTGACACT | + |
|
Preference number: 3 (lower is better) Translates to: LQQESSSNSTLL*SEFQWLLLSDT Trigger: AGTGTCAGAAAGCAACAGCCATTGGAACTCTGATCACAATAGTGTAGAGTTGGAGCTAGACTCTTGCTGTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216998.2 |
||
| 3UTR TCA 72 bp | CTTAGAGCCCAAGCCCTACCAAGTTCACCTTTCCCTTaGGAGGATCAGTTTATTAAATATTGGAGACCACAA | + |
|
Preference number: 3 (lower is better) Translates to: LRAQALPSSPFP*EDQFIKYWRPQ Trigger: TTGTGGTCTCCAATATTTAATAAACTGATCCTCTCAAGGGAAAGGTGAACTTGGTAGGGCTTGGGCTCTAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216998.2 |
||
| 3UTR-3UTR CAA 90 bp | TACTTCATTGTTCTGAACTCACAGCAACAAGGAGAAGGTCTTAGGCACAGGAATTTTTGGGCTTCAATTTaGAGCAGAAGGGCAGTGTAT | + |
|
Preference number: 3 (lower is better) Translates to: YFIVLNSQQQGEGLRHRNFWASI*SRRAVY Trigger: ATACACTGCCCTTCTGCTCAAAATTGAAGCCCAAAA...ATTCCTGTGCCTAAGACCTTCTCCTTGTTGCTGTGAGTTCAGAACAATGAAGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 ENSMUST00000216998.2 |
||
| 3UTR-3UTR CAA 90 bp | TTAAAAGTCTCTCTCCAAAACAGCCCAGACCTGGACAGATTAAGTGCTGAATACCTTCCATTGACTCTTTaGGGCTTCAATTTTGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: LKVSLQNSPDLDRLSAEYLPLTL*GFNFEQ Trigger: CTGCTCAAAATTGAAGCCCAAAAGAGTCAATGGAAG...GTATTCAGCACTTAATCTGTCCAGGTCTGGGCTGTTTTGGAGAGAGACTTTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000093853.5 ENSMUST00000216998.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGAGATTGAAGCAGTTATTAAAAGTCTCTCTCCAAAACAGCCCAGACCTGGACAATGTGGACCTTCCATaGACTCTTTTGGGCTTCAAT | + |
|
Preference number: 3 (lower is better) Translates to: KRLKQLLKVSLQNSPDLDNVDLP*TLLGFN Trigger: ATTGAAGCCCAAAAGAGTCAATGGAAGGTCCACATT...GTCCAGGTCTGGGCTGTTTTGGAGAGAGACTTTTAATAACTGCTTCAATCTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000093853.5 ENSMUST00000216998.2 |
||
| 3UTR TCA 72 bp | CCCTTCTTCAGTCATTCAGACTGGATTATATGGGAATaGCTTTGGCATTTAATTCTGCTTCCCTGGAAGATG | + |
|
Preference number: 3 (lower is better) Translates to: PFFSHSDWIIWE*LWHLILLPWKM Trigger: CATCTTCCAGGGAAGCAGAATTAAATGCCAAAGTCATTCCCATATAATCCAGTCTGAATGACTGAAGAAGGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216998.2 |
||
| 3UTR CCA 72 bp | CCCACTAACTTCAGTTCGCTTTTCCAAAGCACACCCTaGCTACAGAATTTAATGTTGCATGAAATATACGAG | + |
|
Preference number: 3 (lower is better) Translates to: PTNFSSLFQSTP*LQNLMLHEIYE Trigger: CTCGTATATTTCATGCAACATTAAATTCTGTAGCCAGGGTGTGCTTTGGAAAAGCGAACTGAAGTTAGTGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216998.2 |
||
| 3UTR-3UTR CAA 90 bp | AACACGTCTCAAAACCTTCCACAAATTACAACCAGGAGAAATACAACCCAAGTCTTTTGGGCTTCAATTTaGAGCAGAAGGGCAGTGTAT | + |
|
Preference number: 3 (lower is better) Translates to: NTSQNLPQITTRRNTTQVFWASI*SRRAVY Trigger: ATACACTGCCCTTCTGCTCAAAATTGAAGCCCAAAA...GACTTGGGTTGTATTTCTCCTGGTTGTAATTTGTGGAAGGTTTTGAGACGTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093853.5 ENSMUST00000216998.2 |
||
| 3UTR TCA 72 bp | CTTTGGCATTTAATTCTGCTTCCCTGGAAGATGATGTaGACAGTTGTATACATGCTGTGTTGTGTAGAACTT | + |
|
Preference number: 3 (lower is better) Translates to: LWHLILLPWKMM*TVVYMLCCVEL Trigger: AAGTTCTACACAACACAGCATGTATACAACTGTTCACATCATCTTCCAGGGAAGCAGAATTAAATGCCAAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216998.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCATTTGTGATGTCTTTACAAAGCATTTGTTTAGATTGATGCAGCCATTTGCTAATGTGGACCTTCCATaGACTCTTTTGGGCTTCAAT | + |
|
Preference number: 3 (lower is better) Translates to: LICDVFTKHLFRLMQPFANVDLP*TLLGFN Trigger: ATTGAAGCCCAAAAGAGTCAATGGAAGGTCCACATT...AGCAAATGGCTGCATCAATCTAAACAAATGCTTTGTAAAGACATCACAAATGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216998.2 |
||
| 3UTR GCA 72 bp | TACAAAGATCAATTAGCCACAAACACAGGAGTAAAGTaGTGGTGTTTCGAGTCTATAAACTTACCATATCTG | + |
|
Preference number: 3 (lower is better) Translates to: YKDQLATNTGVK*WCFESINLPYL Trigger: CAGATATGGTAAGTTTATAGACTCGAAACACCAGCACTTTACTCCTGTGTTTGTGGCTAATTGATCTTTGTA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216998.2 |
||
| 3UTR CCA 72 bp | AAAGATCAATTAGCCACAAACACAGGAGTAAAGTGCTaGTGTTTCGAGTCTATAAACTTACCATATCTGACT | + |
|
Preference number: 3 (lower is better) Translates to: KDQLATNTGVKC*CFESINLPYLT Trigger: AGTCAGATATGGTAAGTTTATAGACTCGAAACACCAGCACTTTACTCCTGTGTTTGTGGCTAATTGATCTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216998.2 |
||
| 3UTR TCA 72 bp | GAAGTCTGTAATGGCCTGATGTCAAACTCTGAGATATaGCCAAGAAAGTACAGATCAATTTTCTTGATTAAC | + |
|
Preference number: 3 (lower is better) Translates to: EVCNGLMSNSEI*PRKYRSIFLIN Trigger: GTTAATCAAGAAAATTGATCTGTACTTTCTTGGTCATATCTCAGAGTTTGACATCAGGCCATTACAGACTTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 ENSMUST00000216998.2 |
||
| CDS-3UTR TCA 90 bp | GTTTCCCACTCTCATGCAGGTCCACGGACCTCAGTGCTGACAGCAAACAGGCAAAGGACACAGGCAACTTaGACATGGTCCGTAGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VSHSHAGPRTSVLTANRQRTQAT*TWSVAS Trigger: TGAAGCTACGGACCATGTTCAAGTTGCCTGTGTCCT...TTGCCTGTTTGCTGTCAGCACTGAGGTCCGTGGACCTGCATGAGAGTGGGAAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216998.2 |
||
| CDS-3UTR TCA 90 bp | AGATTATGTCCTTGGAGTAACTGGGGCATCCTGGCACTTGGCACAGCTGCAGGACCTGAGAAGCACCACTaGCAAACTGGCCTGAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: RLCPWSNWGILALGTAAGPEKHH*QTGLRR Trigger: TCTTCTCAGGCCAGTTTGTCAGTGGTGCTTCTCAGG...TCCTGCAGCTGTGCCAAGTGCCAGGATGCCCCAGTTACTCCAAGGACATAATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 ENSMUST00000216998.2 |
||
| CDS-3UTR CCA 90 bp | TACAGATTATGTCCTTGGAGTAACTGGGGCATCCTGGCACTTGGCACAGCTGCAACCAGGATGTCCAGCTaGTCCCCCACACAGTGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: YRLCPWSNWGILALGTAATRMSS*SPTQCV Trigger: TACACACTGTGTGGGGGACCAGCTGGACATCCTGGT...TGCAGCTGTGCCAAGTGCCAGGATGCCCCAGTTACTCCAAGGACATAATCTGTA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 ENSMUST00000216998.2 |
||
| 3UTR CAA 72 bp | GCTGATTTTCTCATCCAAGTCCACGGCAAGTTGGTGTaGCAGTTTCCCACTCTCATGCAGGTCCACGGACCT | + |
|
Preference number: 4 (lower is better) Translates to: ADFLIQVHGKLV*QFPTLMQVHGP Trigger: AGGTCCGTGGACCTGCATGAGAGTGGGAAACTGCAACACCAACTTGCCGTGGACTTGGATGAGAAAATCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216998.2 |
||
| CDS-3UTR TCA 90 bp | GACCATAATACAGATTATGTCCTTGGAGTAACTGGGGCATCCTGGCACTTGGCAAGGCACTGCAGGGCATaGGGGTCCCATGACCAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: DHNTDYVLGVTGASWHLARHCRA*GSHDQV Trigger: AACTTGGTCATGGGACCCTCATGCCCTGCAGTGCCT...TGCCAAGTGCCAGGATGCCCCAGTTACTCCAAGGACATAATCTGTATTATGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 ENSMUST00000216998.2 |
||
| CDS-3UTR TCA 90 bp | TACAGATTATGTCCTTGGAGTAACTGGGGCATCCTGGCACTTGGCACAGCTGCACCTGAGAAGCACCACTaGCAAACTGGCCTGAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: YRLCPWSNWGILALGTAAPEKHH*QTGLRR Trigger: TCTTCTCAGGCCAGTTTGTCAGTGGTGCTTCTCAGG...TGCAGCTGTGCCAAGTGCCAGGATGCCCCAGTTACTCCAAGGACATAATCTGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 ENSMUST00000216998.2 |
||
| CDS-3UTR TCA 90 bp | ACAGATTATGTCCTTGGAGTAACTGGGGCATCCTGGCACTTGGCACAGCTGCAGGGCAGTCTTTCATTTTaGTTGGAGCCAGACTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TDYVLGVTGASWHLAQLQGSLSF*LEPDCR Trigger: CCTGCAGTCTGGCTCCAATCAAAATGAAAGACTGCC...CTGCAGCTGTGCCAAGTGCCAGGATGCCCCAGTTACTCCAAGGACATAATCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 ENSMUST00000216998.2 |
||
| CDS-3UTR TCA 90 bp | ACAGATTATGTCCTTGGAGTAACTGGGGCATCCTGGCACTTGGCACAGCTGCAGTGGTGTTTTCTGTTTTaGGGACCACCACAGTGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: TDYVLGVTGASWHLAQLQWCFLF*GPPQCP Trigger: CGGACACTGTGGTGGTCCTCAAAACAGAAAACACCA...CTGCAGCTGTGCCAAGTGCCAGGATGCCCCAGTTACTCCAAGGACATAATCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 |
||
| CDS-3UTR GCA 90 bp | TACAGATTATGTCCTTGGAGTAACTGGGGCATCCTGGCACTTGGCACAGCTGCAAGTTTCCCACTCTCATaGAGGTCCACGGACCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: YRLCPWSNWGILALGTAASFPLS*RSTDLS Trigger: ACTGAGGTCCGTGGACCTGCATGAGAGTGGGAAACT...TGCAGCTGTGCCAAGTGCCAGGATGCCCCAGTTACTCCAAGGACATAATCTGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 |
||
| CDS-3UTR GCA 90 bp | AGATTATGTCCTTGGAGTAACTGGGGCATCCTGGCACTTGGCACAGCTGCAGGAACGGCAAGTTGGTGTTaGAGTTTCCCACTCTCATGC | + |
|
Preference number: 4 (lower is better) Translates to: RLCPWSNWGILALGTAAGTASWC*SFPLSC Trigger: GCATGAGAGTGGGAAACTGCAACACCAACTTGCCGT...TCCTGCAGCTGTGCCAAGTGCCAGGATGCCCCAGTTACTCCAAGGACATAATCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 |
||
| CDS-3UTR CCA 90 bp | ACAGATTATGTCCTTGGAGTAACTGGGGCATCCTGGCACTTGGCACAGCTGCAGTTCCTGTTTCCTAGGTaGTCTCTAGCCTCTACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TDYVLGVTGASWHLAQLQFLFPR*SLASTR Trigger: CCTGGTAGAGGCTAGAGACCACCTAGGAAACAGGAA...CTGCAGCTGTGCCAAGTGCCAGGATGCCCCAGTTACTCCAAGGACATAATCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 ENSMUST00000216998.2 |
||
| CDS-3UTR CCA 90 bp | AGATTATGTCCTTGGAGTAACTGGGGCATCCTGGCACTTGGCACAGCTGCAGGAAAGTCCACGGCAAGTTaGTGTTGCAGTTTCCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: RLCPWSNWGILALGTAAGKSTAS*CCSFPL Trigger: GAGTGGGAAACTGCAACACCAACTTGCCGTGGACTT...TCCTGCAGCTGTGCCAAGTGCCAGGATGCCCCAGTTACTCCAAGGACATAATCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 |
||
| CDS-3UTR TCA 90 bp | GTTTCCCACTCTCATGCAGGTCCACGGACCTCAGTGCTGACAGCAAACAGGCAACTCCACAGCTATATTTaGCCTTTCAAAGAGGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VSHSHAGPRTSVLTANRQLHSYI*PFKEAP Trigger: AGGAGCCTCTTTGAAAGGTCAAATATAGCTGTGGAG...TTGCCTGTTTGCTGTCAGCACTGAGGTCCGTGGACCTGCATGAGAGTGGGAAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216998.2 |
||
| CDS-3UTR CCA 90 bp | GACCATAATACAGATTATGTCCTTGGAGTAACTGGGGCATCCTGGCACTTGGCAACCAGGATGTCCAGCTaGTCCCCCACACAGTGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: DHNTDYVLGVTGASWHLATRMSS*SPTQCV Trigger: TACACACTGTGTGGGGGACCAGCTGGACATCCTGGT...TGCCAAGTGCCAGGATGCCCCAGTTACTCCAAGGACATAATCTGTATTATGGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 ENSMUST00000216998.2 |
||
| CDS-3UTR TCA 90 bp | GACCATAATACAGATTATGTCCTTGGAGTAACTGGGGCATCCTGGCACTTGGCATTGACTGCATGTAGGTaGGAGCTGCACAGGGCACAT | + |
|
Preference number: 4 (lower is better) Translates to: DHNTDYVLGVTGASWHLALTACR*ELHRAH Trigger: ATGTGCCCTGTGCAGCTCTCACCTACATGCAGTCAA...TGCCAAGTGCCAGGATGCCCCAGTTACTCCAAGGACATAATCTGTATTATGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 ENSMUST00000216998.2 |
||
| CDS-3UTR CCA 90 bp | GTTCTGAACTCACAGCAACAAGGAGAAGGTCTTAGGCACAGGAATCCTAACTTCACCAGGATGTCCAGCTaGTCCCCCACACAGTGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: VLNSQQQGEGLRHRNPNFTRMSS*SPTQCV Trigger: TACACACTGTGTGGGGGACCAGCTGGACATCCTGGT...GAAGTTAGGATTCCTGTGCCTAAGACCTTCTCCTTGTTGCTGTGAGTTCAGAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 ENSMUST00000216998.2 |
||
| CDS-3UTR CCA 90 bp | TACAGATTATGTCCTTGGAGTAACTGGGGCATCCTGGCACTTGGCACAGCTGCAGCATTTCTCCTTCACTaGAGCTGTGTCTGTGTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: YRLCPWSNWGILALGTAAAFLLH*SCVCVA Trigger: TGCAACACAGACACAGCTCCAGTGAAGGAGAAATGC...TGCAGCTGTGCCAAGTGCCAGGATGCCCCAGTTACTCCAAGGACATAATCTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 ENSMUST00000216998.2 |
||
| CDS-3UTR CCA 90 bp | AGATTATGTCCTTGGAGTAACTGGGGCATCCTGGCACTTGGCACAGCTGCAGGATCCACTGGCGGATTGTaGAATCACCCATTAGATAGA | + |
|
Preference number: 4 (lower is better) Translates to: RLCPWSNWGILALGTAAGSTGGL*NHPLDR Trigger: TCTATCTAATGGGTGATTCCACAATCCGCCAGTGGA...TCCTGCAGCTGTGCCAAGTGCCAGGATGCCCCAGTTACTCCAAGGACATAATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 ENSMUST00000216998.2 |
||
| CDS-3UTR CCA 90 bp | TACAGATTATGTCCTTGGAGTAACTGGGGCATCCTGGCACTTGGCACAGCTGCAAAGGGTCTGAAATGCTaGCCCAGAGAAATGACGATG | + |
|
Preference number: 4 (lower is better) Translates to: YRLCPWSNWGILALGTAAKGLKC*PREMTM Trigger: CATCGTCATTTCTCTGGGCCAGCATTTCAGACCCTT...TGCAGCTGTGCCAAGTGCCAGGATGCCCCAGTTACTCCAAGGACATAATCTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 |
||
| CDS-3UTR TCA 90 bp | AAGAGATTGAAGCAGTTATTAAAAGTCTCTCTCCAAAACAGCCCAGACCTGGACAGGCACTGCAGGGCATaGGGGTCCCATGACCAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: KRLKQLLKVSLQNSPDLDRHCRA*GSHDQV Trigger: AACTTGGTCATGGGACCCTCATGCCCTGCAGTGCCT...GTCCAGGTCTGGGCTGTTTTGGAGAGAGACTTTTAATAACTGCTTCAATCTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000093853.5 ENSMUST00000216998.2 |
||
| CDS-3UTR TCA 90 bp | GACCATAATACAGATTATGTCCTTGGAGTAACTGGGGCATCCTGGCACTTGGCAACTGGCCTGAGAAGATaGTTCTGTCGTAGCCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: DHNTDYVLGVTGASWHLATGLRR*FCRSPV Trigger: AACAGGGCTACGACAGAATCATCTTCTCAGGCCAGT...TGCCAAGTGCCAGGATGCCCCAGTTACTCCAAGGACATAATCTGTATTATGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 ENSMUST00000216998.2 |
||
| CDS-3UTR GCA 90 bp | GTTCTGAACTCACAGCAACAAGGAGAAGGTCTTAGGCACAGGAATCCTAACTTCGTGCCCACTAGGGATTaGAGATACCATCCCGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VLNSQQQGEGLRHRNPNFVPTRD*RYHPEL Trigger: AAGCTCGGGATGGTATCTGCAATCCCTAGTGGGCAC...GAAGTTAGGATTCCTGTGCCTAAGACCTTCTCCTTGTTGCTGTGAGTTCAGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 ENSMUST00000216998.2 |
||
| CDS-3UTR GCA 90 bp | GACCATAATACAGATTATGTCCTTGGAGTAACTGGGGCATCCTGGCACTTGGCAGCGTTTTTCCAGACGTaGCCACTAGGGATTGCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: DHNTDYVLGVTGASWHLAAFFQT*PLGIAD Trigger: ATCTGCAATCCCTAGTGGGCACGTCTGGAAAAACGC...TGCCAAGTGCCAGGATGCCCCAGTTACTCCAAGGACATAATCTGTATTATGGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 ENSMUST00000216998.2 |
||
| CDS-3UTR GCA 90 bp | GACCATAATACAGATTATGTCCTTGGAGTAACTGGGGCATCCTGGCACTTGGCAACGGCAAGTTGGTGTTaGAGTTTCCCACTCTCATGC | + |
|
Preference number: 4 (lower is better) Translates to: DHNTDYVLGVTGASWHLATASWC*SFPLSC Trigger: GCATGAGAGTGGGAAACTGCAACACCAACTTGCCGT...TGCCAAGTGCCAGGATGCCCCAGTTACTCCAAGGACATAATCTGTATTATGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 |
||
| CDS-3UTR CCA 90 bp | AGATTATGTCCTTGGAGTAACTGGGGCATCCTGGCACTTGGCACAGCTGCAGGAACATCCTCTGGTGGGTaGACATTGTTTATGCCATAT | + |
|
Preference number: 4 (lower is better) Translates to: RLCPWSNWGILALGTAAGTSSGG*TLFMPY Trigger: ATATGGCATAAACAATGTCCACCCACCAGAGGATGT...TCCTGCAGCTGTGCCAAGTGCCAGGATGCCCCAGTTACTCCAAGGACATAATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 |
||
| 3UTR CAA 72 bp | TTATATCAAGGCCAGTATGGAGACATAGGCTCAACCTaGCATTCAGTGACAAGAGCCAGGGCCCAGAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: LYQGQYGDIGST*HSVTRARAQRC Trigger: ACATCTCTGGGCCCTGGCTCTTGTCACTGAATGCAAGGTTGAGCCTATGTCTCCATACTGGCCTTGATATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216998.2 |
||
| 3UTR CAA 72 bp | ACTCGCTGGGGGCAAGTGGTACAACTACTGACTTCATaGCTTCCCACTAACTTCAGTTCGCTTTTCCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: TRWGQVVQLLTS*LPTNFSSLFQS Trigger: GCTTTGGAAAAGCGAACTGAAGTTAGTGGGAAGCAATGAAGTCAGTAGTTGTACCACTTGCCCCCAGCGAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216998.2 |
||
| CDS-3UTR TCA 90 bp | GAGCCCAAGCCCTACCAAGTTCACCTTTCCCTTGAGAGGATCAGTTTATTAAATTTGACTGCATGTAGGTaGGAGCTGCACAGGGCACAT | + |
|
Preference number: 4 (lower is better) Translates to: EPKPYQVHLSLERISLLNLTACR*ELHRAH Trigger: ATGTGCCCTGTGCAGCTCTCACCTACATGCAGTCAA...ATTTAATAAACTGATCCTCTCAAGGGAAAGGTGAACTTGGTAGGGCTTGGGCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216998.2 |
||
| CDS-3UTR TCA 90 bp | GTTCTGAACTCACAGCAACAAGGAGAAGGTCTTAGGCACAGGAATCCTAACTTCGGCAGTCTTTCATTTTaGTTGGAGCCAGACTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VLNSQQQGEGLRHRNPNFGSLSF*LEPDCR Trigger: CCTGCAGTCTGGCTCCAATCAAAATGAAAGACTGCC...GAAGTTAGGATTCCTGTGCCTAAGACCTTCTCCTTGTTGCTGTGAGTTCAGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 ENSMUST00000216998.2 |
||
| CDS-3UTR TCA 90 bp | ACAGATTATGTCCTTGGAGTAACTGGGGCATCCTGGCACTTGGCACAGCTGCAGTGTTCTCTATTTCTTTaGCAGAGTAGACCAATGACC | + |
|
Preference number: 4 (lower is better) Translates to: TDYVLGVTGASWHLAQLQCSLFL*QSRPMT Trigger: GGTCATTGGTCTACTCTGTCAAAGAAATAGAGAACA...CTGCAGCTGTGCCAAGTGCCAGGATGCCCCAGTTACTCCAAGGACATAATCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 |
||
| CDS-3UTR TCA 90 bp | GACCATAATACAGATTATGTCCTTGGAGTAACTGGGGCATCCTGGCACTTGGCACTCCACAGCTATATTTaGCCTTTCAAAGAGGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: DHNTDYVLGVTGASWHLALHSYI*PFKEAP Trigger: AGGAGCCTCTTTGAAAGGTCAAATATAGCTGTGGAG...TGCCAAGTGCCAGGATGCCCCAGTTACTCCAAGGACATAATCTGTATTATGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 ENSMUST00000216998.2 |
||
| CDS-3UTR GCA 90 bp | TGGGCTTCAATTTTGAGCAGAAGGGCAGTGTATGAATGCCTTGTTAAGATGAAGGTGCCCACTAGGGATTaGAGATACCATCCCGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: WASILSRRAVYECLVKMKVPTRD*RYHPEL Trigger: AAGCTCGGGATGGTATCTGCAATCCCTAGTGGGCAC...CTTCATCTTAACAAGGCATTCATACACTGCCCTTCTGCTCAAAATTGAAGCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 ENSMUST00000216998.2 |
||
| CDS-3UTR GCA 90 bp | TACAGATTATGTCCTTGGAGTAACTGGGGCATCCTGGCACTTGGCACAGCTGCAGGTGGACATTGTTTATaGCATATGCAACTGTCATGT | + |
|
Preference number: 4 (lower is better) Translates to: YRLCPWSNWGILALGTAAGGHCL*HMQLSC Trigger: ACATGACAGTTGCATATGGCATAAACAATGTCCACC...TGCAGCTGTGCCAAGTGCCAGGATGCCCCAGTTACTCCAAGGACATAATCTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 |
||
| CDS-3UTR CCA 90 bp | GTTCTGAACTCACAGCAACAAGGAGAAGGTCTTAGGCACAGGAATCCTAACTTCGTCTTTCATTTTGATTaGAGCCAGACTGCAGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: VLNSQQQGEGLRHRNPNFVFHFD*SQTAGG Trigger: GCCTCCTGCAGTCTGGCTCCAATCAAAATGAAAGAC...GAAGTTAGGATTCCTGTGCCTAAGACCTTCTCCTTGTTGCTGTGAGTTCAGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 ENSMUST00000216998.2 |
||
| CDS-3UTR CCA 90 bp | GTTCTGAACTCACAGCAACAAGGAGAAGGTCTTAGGCACAGGAATCCTAACTTCAAGGGTCTGAAATGCTaGCCCAGAGAAATGACGATG | + |
|
Preference number: 4 (lower is better) Translates to: VLNSQQQGEGLRHRNPNFKGLKC*PREMTM Trigger: CATCGTCATTTCTCTGGGCCAGCATTTCAGACCCTT...GAAGTTAGGATTCCTGTGCCTAAGACCTTCTCCTTGTTGCTGTGAGTTCAGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 |
||
| 3UTR CAA 72 bp | GCGATGGTAAAGGTAGTCACTAGAGTCTCAATTTTGTaGCTGAGAGAACGTCACGAGGAGCTGACTGTCATG | + |
|
Preference number: 4 (lower is better) Translates to: AMVKVVTRVSIL*LRERHEELTVM Trigger: CATGACAGTCAGCTCCTCGTGACGTTCTCTCAGCAACAAAATTGAGACTCTAGTGACTACCTTTACCATCGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216998.2 |
||
| CDS-3UTR TCA 90 bp | TGGGCTTCAATTTTGAGCAGAAGGGCAGTGTATGAATGCCTTGTTAAGATGAAGAGGACACAGGCAACTTaGACATGGTCCGTAGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: WASILSRRAVYECLVKMKRTQAT*TWSVAS Trigger: TGAAGCTACGGACCATGTTCAAGTTGCCTGTGTCCT...CTTCATCTTAACAAGGCATTCATACACTGCCCTTCTGCTCAAAATTGAAGCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 ENSMUST00000216998.2 |
||
| CDS-3UTR TCA 90 bp | GTTCTGAACTCACAGCAACAAGGAGAAGGTCTTAGGCACAGGAATCCTAACTTCACTGACAAACTGGCCTaGGAAGATGATTCTGTCGTA | + |
|
Preference number: 4 (lower is better) Translates to: VLNSQQQGEGLRHRNPNFTDKLA*EDDSVV Trigger: TACGACAGAATCATCTTCTCAGGCCAGTTTGTCAGT...GAAGTTAGGATTCCTGTGCCTAAGACCTTCTCCTTGTTGCTGTGAGTTCAGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 ENSMUST00000216998.2 |
||
| CDS-3UTR TCA 90 bp | ATTGAAGCAGTTATTAAAAGTCTCTCTCCAAAACAGCCCAGACCTGGACAGATTCCTGAGAAGCACCACTaGCAAACTGGCCTGAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: IEAVIKSLSPKQPRPGQIPEKHH*QTGLRR Trigger: TCTTCTCAGGCCAGTTTGTCAGTGGTGCTTCTCAGG...AATCTGTCCAGGTCTGGGCTGTTTTGGAGAGAGACTTTTAATAACTGCTTCAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093853.5 ENSMUST00000216998.2 |
||
| CDS-3UTR TCA 90 bp | AGCAAAGAGATTGAAGCAGTTATTAAAAGTCTCTCTCCAAAACAGCCCAGACCTTTGACTGCATGTAGGTaGGAGCTGCACAGGGCACAT | + |
|
Preference number: 4 (lower is better) Translates to: SKEIEAVIKSLSPKQPRPLTACR*ELHRAH Trigger: ATGTGCCCTGTGCAGCTCTCACCTACATGCAGTCAA...AGGTCTGGGCTGTTTTGGAGAGAGACTTTTAATAACTGCTTCAATCTCTTTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093853.5 ENSMUST00000216998.2 |
||
| CDS-3UTR GCA 90 bp | AACACGTCTCAAAACCTTCCACAAATTACAACCAGGAGAAATACAACCCAAGTCGTGCCCACTAGGGATTaGAGATACCATCCCGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: NTSQNLPQITTRRNTTQVVPTRD*RYHPEL Trigger: AAGCTCGGGATGGTATCTGCAATCCCTAGTGGGCAC...GACTTGGGTTGTATTTCTCCTGGTTGTAATTTGTGGAAGGTTTTGAGACGTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093853.5 ENSMUST00000216998.2 |
||
| CDS-3UTR CCA 90 bp | AAGAGATTGAAGCAGTTATTAAAAGTCTCTCTCCAAAACAGCCCAGACCTGGACAAGTCCACGGCAAGTTaGTGTTGCAGTTTCCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: KRLKQLLKVSLQNSPDLDKSTAS*CCSFPL Trigger: GAGTGGGAAACTGCAACACCAACTTGCCGTGGACTT...GTCCAGGTCTGGGCTGTTTTGGAGAGAGACTTTTAATAACTGCTTCAATCTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093853.5 |
||
| CDS-3UTR TCA 90 bp | TTGGCACAGCTGCAGGAGTCACTGTATCTTTTAAGTTCAAAGAGTGACTTTCAAAGGACACAGGCAACTTaGACATGGTCCGTAGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LAQLQESLYLLSSKSDFQRTQAT*TWSVAS Trigger: TGAAGCTACGGACCATGTTCAAGTTGCCTGTGTCCT...TTGAAAGTCACTCTTTGAACTTAAAAGATACAGTGACTCCTGCAGCTGTGCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 ENSMUST00000216998.2 |
||
| CDS-3UTR TCA 90 bp | AAAGAGATTGAAGCAGTTATTAAAAGTCTCTCTCCAAAACAGCCCAGACCTGGAACTGGCCTGAGAAGATaGTTCTGTCGTAGCCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: KEIEAVIKSLSPKQPRPGTGLRR*FCRSPV Trigger: AACAGGGCTACGACAGAATCATCTTCTCAGGCCAGT...TCCAGGTCTGGGCTGTTTTGGAGAGAGACTTTTAATAACTGCTTCAATCTCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093853.5 ENSMUST00000216998.2 |
||
| CDS-3UTR TCA 90 bp | ATTTGCTTCAATGATATTCATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGGCAGTCTTTCATTTTaGTTGGAGCCAGACTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ICFNDIHVCVCVCVCVCVGSLSF*LEPDCR Trigger: CCTGCAGTCTGGCTCCAATCAAAATGAAAGACTGCC...CACACACACACACACACACACACACACACACACATGAATATCATTGAAGCAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216998.2 |
||
| CDS-3UTR TCA 90 bp | ACACGTCTCAAAACCTTCCACAAATTACAACCAGGAGAAATACAACCCAAGTCACAATGGGAAAGGGTCTaGAATGCTGGCCCAGAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: TRLKTFHKLQPGEIQPKSQWERV*NAGPEK Trigger: TTTCTCTGGGCCAGCATTTCAGACCCTTTCCCATTG...TGACTTGGGTTGTATTTCTCCTGGTTGTAATTTGTGGAAGGTTTTGAGACGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093853.5 |
||
| CDS-3UTR TCA 90 bp | TTGGCACAGCTGCAGGAGTCACTGTATCTTTTAAGTTCAAAGAGTGACTTTCAACAATGGGAAAGGGTCTaGAATGCTGGCCCAGAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LAQLQESLYLLSSKSDFQQWERV*NAGPEK Trigger: TTTCTCTGGGCCAGCATTTCAGACCCTTTCCCATTG...TTGAAAGTCACTCTTTGAACTTAAAAGATACAGTGACTCCTGCAGCTGTGCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 |
||
| CDS-3UTR TCA 90 bp | TTGGCACAGCTGCAGGAGTCACTGTATCTTTTAAGTTCAAAGAGTGACTTTCAATGGTGTTTTCTGTTTTaGGGACCACCACAGTGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: LAQLQESLYLLSSKSDFQWCFLF*GPPQCP Trigger: CGGACACTGTGGTGGTCCTCAAAACAGAAAACACCA...TTGAAAGTCACTCTTTGAACTTAAAAGATACAGTGACTCCTGCAGCTGTGCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 |
||
| CDS-3UTR GCA 90 bp | TTGGCACAGCTGCAGGAGTCACTGTATCTTTTAAGTTCAAAGAGTGACTTTCAAGCGTTTTTCCAGACGTaGCCACTAGGGATTGCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LAQLQESLYLLSSKSDFQAFFQT*PLGIAD Trigger: ATCTGCAATCCCTAGTGGGCACGTCTGGAAAAACGC...TTGAAAGTCACTCTTTGAACTTAAAAGATACAGTGACTCCTGCAGCTGTGCCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 ENSMUST00000216998.2 |
||
| CDS-3UTR CCA 90 bp | TTGGCACAGCTGCAGGAGTCACTGTATCTTTTAAGTTCAAAGAGTGACTTTCAATTCCTGTTTCCTAGGTaGTCTCTAGCCTCTACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LAQLQESLYLLSSKSDFQFLFPR*SLASTR Trigger: CCTGGTAGAGGCTAGAGACCACCTAGGAAACAGGAA...TTGAAAGTCACTCTTTGAACTTAAAAGATACAGTGACTCCTGCAGCTGTGCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 ENSMUST00000216998.2 |
||
| CDS-3UTR CCA 90 bp | TTAAAAGTCTCTCTCCAAAACAGCCCAGACCTGGACAGATTAAGTGCTGAATACGCATTTCTCCTTCACTaGAGCTGTGTCTGTGTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LKVSLQNSPDLDRLSAEYAFLLH*SCVCVA Trigger: TGCAACACAGACACAGCTCCAGTGAAGGAGAAATGC...GTATTCAGCACTTAATCTGTCCAGGTCTGGGCTGTTTTGGAGAGAGACTTTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093853.5 ENSMUST00000216998.2 |
||
| CDS-3UTR CCA 90 bp | TTCAATGATATTCATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGGTCTTTCATTTTGATTaGAGCCAGACTGCAGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: FNDIHVCVCVCVCVCVCLVFHFD*SQTAGG Trigger: GCCTCCTGCAGTCTGGCTCCAATCAAAATGAAAGAC...CAGACACACACACACACACACACACACACACACACACACATGAATATCATTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216998.2 |
||
| CDS-3UTR CCA 90 bp | GAGCCCAAGCCCTACCAAGTTCACCTTTCCCTTGAGAGGATCAGTTTATTAAATTCCACTGGCGGATTGTaGAATCACCCATTAGATAGA | + |
|
Preference number: 4 (lower is better) Translates to: EPKPYQVHLSLERISLLNSTGGL*NHPLDR Trigger: TCTATCTAATGGGTGATTCCACAATCCGCCAGTGGA...ATTTAATAAACTGATCCTCTCAAGGGAAAGGTGAACTTGGTAGGGCTTGGGCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216998.2 |
||
| CDS-3UTR TCA 90 bp | TGGGCTTCAATTTTGAGCAGAAGGGCAGTGTATGAATGCCTTGTTAAGATGAAGACTGACAAACTGGCCTaGGAAGATGATTCTGTCGTA | + |
|
Preference number: 4 (lower is better) Translates to: WASILSRRAVYECLVKMKTDKLA*EDDSVV Trigger: TACGACAGAATCATCTTCTCAGGCCAGTTTGTCAGT...CTTCATCTTAACAAGGCATTCATACACTGCCCTTCTGCTCAAAATTGAAGCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 ENSMUST00000216998.2 |
||
| CDS-3UTR CCA 90 bp | AAAGAGATTGAAGCAGTTATTAAAAGTCTCTCTCCAAAACAGCCCAGACCTGGAGCATTTCTCCTTCACTaGAGCTGTGTCTGTGTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: KEIEAVIKSLSPKQPRPGAFLLH*SCVCVA Trigger: TGCAACACAGACACAGCTCCAGTGAAGGAGAAATGC...TCCAGGTCTGGGCTGTTTTGGAGAGAGACTTTTAATAACTGCTTCAATCTCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093853.5 ENSMUST00000216998.2 |
||
| CDS-3UTR CCA 90 bp | AAAGAGATTGAAGCAGTTATTAAAAGTCTCTCTCCAAAACAGCCCAGACCTGGAGTCTTTCATTTTGATTaGAGCCAGACTGCAGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: KEIEAVIKSLSPKQPRPGVFHFD*SQTAGG Trigger: GCCTCCTGCAGTCTGGCTCCAATCAAAATGAAAGAC...TCCAGGTCTGGGCTGTTTTGGAGAGAGACTTTTAATAACTGCTTCAATCTCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000093853.5 ENSMUST00000216998.2 |
||
| 3UTR CAA 72 bp | GAGCAGGAGGACCACTCAGACCTCAGAATTCTCCATTaGCCTAAGGAAAAGAAACTATGGTATCAAACTATG | + |
|
Preference number: 4 (lower is better) Translates to: EQEDHSDLRILH*PKEKKLWYQTM Trigger: CATAGTTTGATACCATAGTTTCTTTTCCTTAGGCAAATGGAGAATTCTGAGGTCTGAGTGGTCCTCCTGCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216998.2 |
||
| CDS-3UTR TCA 90 bp | GTCTCAAAACCTTCCACAAATTACAACCAGGAGAAATACAACCCAAGTCATTTTACTGGCCTGAGAAGATaGTTCTGTCGTAGCCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: VSKPSTNYNQEKYNPSHFTGLRR*FCRSPV Trigger: AACAGGGCTACGACAGAATCATCTTCTCAGGCCAGT...AAAATGACTTGGGTTGTATTTCTCCTGGTTGTAATTTGTGGAAGGTTTTGAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093853.5 ENSMUST00000216998.2 |
||
| CDS-3UTR TCA 90 bp | TTGGCACAGCTGCAGGAGTCACTGTATCTTTTAAGTTCAAAGAGTGACTTTCAAACTGACAAACTGGCCTaGGAAGATGATTCTGTCGTA | + |
|
Preference number: 4 (lower is better) Translates to: LAQLQESLYLLSSKSDFQTDKLA*EDDSVV Trigger: TACGACAGAATCATCTTCTCAGGCCAGTTTGTCAGT...TTGAAAGTCACTCTTTGAACTTAAAAGATACAGTGACTCCTGCAGCTGTGCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 ENSMUST00000216998.2 |
||
| CDS-3UTR TCA 90 bp | AAAGAGATTGAAGCAGTTATTAAAAGTCTCTCTCCAAAACAGCCCAGACCTGGACTCCACAGCTATATTTaGCCTTTCAAAGAGGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KEIEAVIKSLSPKQPRPGLHSYI*PFKEAP Trigger: AGGAGCCTCTTTGAAAGGTCAAATATAGCTGTGGAG...TCCAGGTCTGGGCTGTTTTGGAGAGAGACTTTTAATAACTGCTTCAATCTCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093853.5 ENSMUST00000216998.2 |
||
| CDS-3UTR GCA 90 bp | AAGAGATTGAAGCAGTTATTAAAAGTCTCTCTCCAAAACAGCCCAGACCTGGACATTGTTTATGCCATATaGAACTGTCATGTCCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: KRLKQLLKVSLQNSPDLDIVYAI*NCHVPG Trigger: GCCTGGGACATGACAGTTGCATATGGCATAAACAAT...GTCCAGGTCTGGGCTGTTTTGGAGAGAGACTTTTAATAACTGCTTCAATCTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093853.5 |
||
| CDS-3UTR GCA 90 bp | TACTTCATTGTTCTGAACTCACAGCAACAAGGAGAAGGTCTTAGGCACAGGAATATTGTTTATGCCATATaGAACTGTCATGTCCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: YFIVLNSQQQGEGLRHRNIVYAI*NCHVPG Trigger: GCCTGGGACATGACAGTTGCATATGGCATAAACAAT...ATTCCTGTGCCTAAGACCTTCTCCTTGTTGCTGTGAGTTCAGAACAATGAAGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 |
||
| CDS-3UTR CCA 90 bp | AGCAAAGAGATTGAAGCAGTTATTAAAAGTCTCTCTCCAAAACAGCCCAGACCTTCCACTGGCGGATTGTaGAATCACCCATTAGATAGA | + |
|
Preference number: 4 (lower is better) Translates to: SKEIEAVIKSLSPKQPRPSTGGL*NHPLDR Trigger: TCTATCTAATGGGTGATTCCACAATCCGCCAGTGGA...AGGTCTGGGCTGTTTTGGAGAGAGACTTTTAATAACTGCTTCAATCTCTTTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093853.5 ENSMUST00000216998.2 |
||
| 3UTR CAA 72 bp | CTTTTCCAAAGCACACCCTGGCTACAGAATTTAATGTaGCATGAAATATACGAGAGGTGTCTTCCCACTACA | + |
|
Preference number: 4 (lower is better) Translates to: LFQSTPWLQNLM*HEIYERCLPTT Trigger: TGTAGTGGGAAGACACCTCTCGTATATTTCATGCAACATTAAATTCTGTAGCCAGGGTGTGCTTTGGAAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216998.2 |
||
| CDS-3UTR CCA 90 bp | TACTTCATTGTTCTGAACTCACAGCAACAAGGAGAAGGTCTTAGGCACAGGAATCCCACATTGAGATCCTaGAAAATATCCTTTAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: YFIVLNSQQQGEGLRHRNPTLRS*KISFKA Trigger: TGCCTTAAAGGATATTTTCCAGGATCTCAATGTGGG...ATTCCTGTGCCTAAGACCTTCTCCTTGTTGCTGTGAGTTCAGAACAATGAAGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 |
||
| CDS-3UTR CCA 90 bp | ATTGAAGCAGTTATTAAAAGTCTCTCTCCAAAACAGCCCAGACCTGGACAGATTACATCCTCTGGTGGGTaGACATTGTTTATGCCATAT | + |
|
Preference number: 4 (lower is better) Translates to: IEAVIKSLSPKQPRPGQITSSGG*TLFMPY Trigger: ATATGGCATAAACAATGTCCACCCACCAGAGGATGT...AATCTGTCCAGGTCTGGGCTGTTTTGGAGAGAGACTTTTAATAACTGCTTCAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093853.5 |
||
| CDS-3UTR GCA 90 bp | AACACGTCTCAAAACCTTCCACAAATTACAACCAGGAGAAATACAACCCAAGTCGGTGGACATTGTTTATaGCATATGCAACTGTCATGT | + |
|
Preference number: 4 (lower is better) Translates to: NTSQNLPQITTRRNTTQVGGHCL*HMQLSC Trigger: ACATGACAGTTGCATATGGCATAAACAATGTCCACC...GACTTGGGTTGTATTTCTCCTGGTTGTAATTTGTGGAAGGTTTTGAGACGTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093853.5 |
||
| CDS-3UTR CCA 90 bp | TTGGCACAGCTGCAGGAGTCACTGTATCTTTTAAGTTCAAAGAGTGACTTTCAACCCACATTGAGATCCTaGAAAATATCCTTTAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LAQLQESLYLLSSKSDFQPTLRS*KISFKA Trigger: TGCCTTAAAGGATATTTTCCAGGATCTCAATGTGGG...TTGAAAGTCACTCTTTGAACTTAAAAGATACAGTGACTCCTGCAGCTGTGCCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 |
||
| CDS-3UTR TCA 90 bp | AACACGTCTCAAAACCTTCCACAAATTACAACCAGGAGAAATACAACCCAAGTCTTTCTGAAAGAGCCTTaGATAGCTTATACTGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: NTSQNLPQITTRRNTTQVFLKEP*IAYTET Trigger: TGTCTCAGTATAAGCTATTCAAGGCTCTTTCAGAAA...GACTTGGGTTGTATTTCTCCTGGTTGTAATTTGTGGAAGGTTTTGAGACGTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216998.2 |
||
| CDS GCA 90 bp | GGAGGCAGGAGTCCATGCGTTTTTCCAGACGTGCCCACTAGGGATTaGAGATACCATCCCGAGCTTGCATTTCTCCTTCACTGGAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: GGRSPCVFPDVPTRD*RYHPELAFLLHWSC Trigger: ACAGCTCCAGTGAAGGAGAAATGCAAGCTCGGGATGGTATCTGCAATCCCTAGTGGGCACGTCTGGAAAAACGCATGGACTCCTGCCTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 ENSMUST00000216998.2 |
||
| CDS-3UTR CAA 90 bp | ACAGATTATGTCCTTGGAGTAACTGGGGCATCCTGGCACTTGGCACAGCTGCAGCGTAGCCCTGTTTCCTaGATCTCCAGAGAGCTGACA | + |
|
Preference number: 5 (lower is better) Translates to: TDYVLGVTGASWHLAQLQRSPVS*ISRELT Trigger: TGTCAGCTCTCTGGAGATCAAGGAAACAGGGCTACG...CTGCAGCTGTGCCAAGTGCCAGGATGCCCCAGTTACTCCAAGGACATAATCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 ENSMUST00000216998.2 |
||
| CDS-3UTR CAA 90 bp | ACAGATTATGTCCTTGGAGTAACTGGGGCATCCTGGCACTTGGCACAGCTGCAGCAAGTCCACGGCAAGTaGGTGTTGCAGTTTCCCACT | + |
|
Preference number: 5 (lower is better) Translates to: TDYVLGVTGASWHLAQLQQVHGK*VLQFPT Trigger: AGTGGGAAACTGCAACACCAACTTGCCGTGGACTTG...CTGCAGCTGTGCCAAGTGCCAGGATGCCCCAGTTACTCCAAGGACATAATCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 |
||
| CDS GCA 90 bp | GTCTTTCATTTTGATTGGAGCCAGACTGCAGGAGGCAGGAGTCCATaGGTTTTTCCAGACGTGCCCACTAGGGATTGCAGATACCATCCC | + |
|
Preference number: 5 (lower is better) Translates to: VFHFDWSQTAGGRSP*VFPDVPTRDCRYHP Trigger: GGGATGGTATCTGCAATCCCTAGTGGGCACGTCTGGAAAAACGCATGGACTCCTGCCTCCTGCAGTCTGGCTCCAATCAAAATGAAAGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 ENSMUST00000216998.2 |
||
| CDS-3UTR CAA 90 bp | GTGTACTGTGCTGTGTACTGCCATAGCAGGGAAGGGCTGGGCTGGAAATCTTCAGGCACAGCTCAACACTaGAATTTAGAACCAGGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: VYCAVYCHSREGLGWKSSGTAQH*NLEPGH Trigger: GTGCCCTGGTTCTAAATTCAAGTGTTGAGCTGTGCC...TGAAGATTTCCAGCCCAGCCCTTCCCTGCTATGGCAGTACACAGCACAGTACAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216998.2 |
||
| CDS-3UTR CAA 90 bp | GTTTCCCACTCTCATGCAGGTCCACGGACCTCAGTGCTGACAGCAAACAGGCAAGTGTCTGTGTTGCATTaGGAGACACTAATCGCATTG | + |
|
Preference number: 5 (lower is better) Translates to: VSHSHAGPRTSVLTANRQVSVLH*ETLIAL Trigger: CAATGCGATTAGTGTCTCCAAATGCAACACAGACAC...TTGCCTGTTTGCTGTCAGCACTGAGGTCCGTGGACCTGCATGAGAGTGGGAAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216998.2 |
||
| CDS-3UTR CAA 90 bp | AGATTATGTCCTTGGAGTAACTGGGGCATCCTGGCACTTGGCACAGCTGCAGGAGGAGCTGTGTCTGTGTaGCATTTGGAGACACTAATC | + |
|
Preference number: 5 (lower is better) Translates to: RLCPWSNWGILALGTAAGGAVSV*HLETLI Trigger: GATTAGTGTCTCCAAATGCAACACAGACACAGCTCC...TCCTGCAGCTGTGCCAAGTGCCAGGATGCCCCAGTTACTCCAAGGACATAATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 ENSMUST00000216998.2 |
||
| CDS-3UTR CAA 90 bp | AGATTATGTCCTTGGAGTAACTGGGGCATCCTGGCACTTGGCACAGCTGCAGGAGTGTCTGTGTTGCATTaGGAGACACTAATCGCATTG | + |
|
Preference number: 5 (lower is better) Translates to: RLCPWSNWGILALGTAAGVSVLH*ETLIAL Trigger: CAATGCGATTAGTGTCTCCAAATGCAACACAGACAC...TCCTGCAGCTGTGCCAAGTGCCAGGATGCCCCAGTTACTCCAAGGACATAATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 ENSMUST00000216998.2 |
||
| CDS-3UTR CAA 90 bp | AGATTATGTCCTTGGAGTAACTGGGGCATCCTGGCACTTGGCACAGCTGCAGGATCTGGTGGGTGGACATaGTTTATGCCATATGCAACT | + |
|
Preference number: 5 (lower is better) Translates to: RLCPWSNWGILALGTAAGSGGWT*FMPYAT Trigger: AGTTGCATATGGCATAAACAATGTCCACCCACCAGA...TCCTGCAGCTGTGCCAAGTGCCAGGATGCCCCAGTTACTCCAAGGACATAATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 |
||
| CDS-3UTR CAA 90 bp | AGATTATGTCCTTGGAGTAACTGGGGCATCCTGGCACTTGGCACAGCTGCAGGAGTGTTGACTTTGCTTTaGAAGTATTCCATCCACTGG | + |
|
Preference number: 5 (lower is better) Translates to: RLCPWSNWGILALGTAAGVLTLL*KYSIHW Trigger: CCAGTGGATGGAATACTTCAAAAGCAAAGTCAACAC...TCCTGCAGCTGTGCCAAGTGCCAGGATGCCCCAGTTACTCCAAGGACATAATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 |
||
| CDS-3UTR CAA 90 bp | AGATTATGTCCTTGGAGTAACTGGGGCATCCTGGCACTTGGCACAGCTGCAGGAACGGACCTCAGTGTGTaGACTTTGCTTTTGAAGTAT | + |
|
Preference number: 5 (lower is better) Translates to: RLCPWSNWGILALGTAAGTDLSV*TLLLKY Trigger: ATACTTCAAAAGCAAAGTCAACACACTGAGGTCCGT...TCCTGCAGCTGTGCCAAGTGCCAGGATGCCCCAGTTACTCCAAGGACATAATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 |
||
| CDS-3UTR CAA 90 bp | ACAGATTATGTCCTTGGAGTAACTGGGGCATCCTGGCACTTGGCACAGCTGCAGGAGACACTAATCGCATaGGATTTTTCCATAATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TDYVLGVTGASWHLAQLQETLIA*DFSIIS Trigger: GGAGATTATGGAAAAATCCAATGCGATTAGTGTCTC...CTGCAGCTGTGCCAAGTGCCAGGATGCCCCAGTTACTCCAAGGACATAATCTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 ENSMUST00000216998.2 |
||
| CDS-3UTR CAA 90 bp | GACCATAATACAGATTATGTCCTTGGAGTAACTGGGGCATCCTGGCACTTGGCAGTGTCTGTGTTGCATTaGGAGACACTAATCGCATTG | + |
|
Preference number: 5 (lower is better) Translates to: DHNTDYVLGVTGASWHLAVSVLH*ETLIAL Trigger: CAATGCGATTAGTGTCTCCAAATGCAACACAGACAC...TGCCAAGTGCCAGGATGCCCCAGTTACTCCAAGGACATAATCTGTATTATGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 ENSMUST00000216998.2 |
||
| CDS-3UTR CAA 90 bp | AAGAGATTGAAGCAGTTATTAAAAGTCTCTCTCCAAAACAGCCCAGACCTGGACCAAGTCCACGGCAAGTaGGTGTTGCAGTTTCCCACT | + |
|
Preference number: 5 (lower is better) Translates to: KRLKQLLKVSLQNSPDLDQVHGK*VLQFPT Trigger: AGTGGGAAACTGCAACACCAACTTGCCGTGGACTTG...GTCCAGGTCTGGGCTGTTTTGGAGAGAGACTTTTAATAACTGCTTCAATCTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093853.5 |
||
| CDS-3UTR CAA 90 bp | ACAGATTATGTCCTTGGAGTAACTGGGGCATCCTGGCACTTGGCACAGCTGCAGAATAATGCTCGTGGTTaGTGCTTAAAGACTATGGTA | + |
|
Preference number: 5 (lower is better) Translates to: TDYVLGVTGASWHLAQLQNNARG*CLKTMV Trigger: TACCATAGTCTTTAAGCACAAACCACGAGCATTATT...CTGCAGCTGTGCCAAGTGCCAGGATGCCCCAGTTACTCCAAGGACATAATCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216998.2 |
||
| CDS-3UTR CAA 90 bp | TACTTCATTGTTCTGAACTCACAGCAACAAGGAGAAGGTCTTAGGCACAGGAATGGCACAGCTCAACACTaGAATTTAGAACCAGGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: YFIVLNSQQQGEGLRHRNGTAQH*NLEPGH Trigger: GTGCCCTGGTTCTAAATTCAAGTGTTGAGCTGTGCC...ATTCCTGTGCCTAAGACCTTCTCCTTGTTGCTGTGAGTTCAGAACAATGAAGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 ENSMUST00000216998.2 |
||
| CDS-3UTR CAA 90 bp | GTTCTGAACTCACAGCAACAAGGAGAAGGTCTTAGGCACAGGAATCCTAACTTCGAGGCTCCTTTCTTGTaGGCTAAGATAGGAAACATC | + |
|
Preference number: 5 (lower is better) Translates to: VLNSQQQGEGLRHRNPNFEAPFL*AKIGNI Trigger: GATGTTTCCTATCTTAGCCAACAAGAAAGGAGCCTC...GAAGTTAGGATTCCTGTGCCTAAGACCTTCTCCTTGTTGCTGTGAGTTCAGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 ENSMUST00000216998.2 |
||
| CDS-3UTR CAA 90 bp | GTTCTGAACTCACAGCAACAAGGAGAAGGTCTTAGGCACAGGAATCCTAACTTCTCTCCACAGCTATATTaGACCTTTCAAAGAGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VLNSQQQGEGLRHRNPNFSPQLY*TFQRGS Trigger: GGAGCCTCTTTGAAAGGTCAAATATAGCTGTGGAGA...GAAGTTAGGATTCCTGTGCCTAAGACCTTCTCCTTGTTGCTGTGAGTTCAGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 ENSMUST00000216998.2 |
||
| CDS-3UTR CAA 90 bp | TGGGCTTCAATTTTGAGCAGAAGGGCAGTGTATGAATGCCTTGTTAAGATGAAGCCATCCACTGGCGGATaGTGGAATCACCCATTAGAT | + |
|
Preference number: 5 (lower is better) Translates to: WASILSRRAVYECLVKMKPSTGG*WNHPLD Trigger: ATCTAATGGGTGATTCCACAATCCGCCAGTGGATGG...CTTCATCTTAACAAGGCATTCATACACTGCCCTTCTGCTCAAAATTGAAGCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 ENSMUST00000216998.2 |
||
| CDS-3UTR CAA 90 bp | GACCATAATACAGATTATGTCCTTGGAGTAACTGGGGCATCCTGGCACTTGGCAAGGGTAACCATGTTTTaGCCACTGGATGCTGATTTT | + |
|
Preference number: 5 (lower is better) Translates to: DHNTDYVLGVTGASWHLARVTMF*PLDADF Trigger: AAAATCAGCATCCAGTGGCAAAAACATGGTTACCCT...TGCCAAGTGCCAGGATGCCCCAGTTACTCCAAGGACATAATCTGTATTATGGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 |
||
| CDS-3UTR CAA 90 bp | TACTTCATTGTTCTGAACTCACAGCAACAAGGAGAAGGTCTTAGGCACAGGAATGGAGCTGTGTCTGTGTaGCATTTGGAGACACTAATC | + |
|
Preference number: 5 (lower is better) Translates to: YFIVLNSQQQGEGLRHRNGAVSV*HLETLI Trigger: GATTAGTGTCTCCAAATGCAACACAGACACAGCTCC...ATTCCTGTGCCTAAGACCTTCTCCTTGTTGCTGTGAGTTCAGAACAATGAAGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 ENSMUST00000216998.2 |
||
| CDS-3UTR CAA 90 bp | TTCAATGATATTCATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGGGAGCTGTGTCTGTGTaGCATTTGGAGACACTAATC | + |
|
Preference number: 5 (lower is better) Translates to: FNDIHVCVCVCVCVCVCLGAVSV*HLETLI Trigger: GATTAGTGTCTCCAAATGCAACACAGACACAGCTCC...CAGACACACACACACACACACACACACACACACACACACATGAATATCATTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216998.2 |
||
| CDS-3UTR CAA 90 bp | AAAGAGATTGAAGCAGTTATTAAAAGTCTCTCTCCAAAACAGCCCAGACCTGGACCATCCACTGGCGGATaGTGGAATCACCCATTAGAT | + |
|
Preference number: 5 (lower is better) Translates to: KEIEAVIKSLSPKQPRPGPSTGG*WNHPLD Trigger: ATCTAATGGGTGATTCCACAATCCGCCAGTGGATGG...TCCAGGTCTGGGCTGTTTTGGAGAGAGACTTTTAATAACTGCTTCAATCTCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093853.5 ENSMUST00000216998.2 |
||
| CDS-3UTR CAA 90 bp | TACTTCATTGTTCTGAACTCACAGCAACAAGGAGAAGGTCTTAGGCACAGGAATTCTCCACAGCTATATTaGACCTTTCAAAGAGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: YFIVLNSQQQGEGLRHRNSPQLY*TFQRGS Trigger: GGAGCCTCTTTGAAAGGTCAAATATAGCTGTGGAGA...ATTCCTGTGCCTAAGACCTTCTCCTTGTTGCTGTGAGTTCAGAACAATGAAGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 ENSMUST00000216998.2 |
||
| CDS-3UTR CAA 90 bp | AACACGTCTCAAAACCTTCCACAAATTACAACCAGGAGAAATACAACCCAAGTCGAGGCTCCTTTCTTGTaGGCTAAGATAGGAAACATC | + |
|
Preference number: 5 (lower is better) Translates to: NTSQNLPQITTRRNTTQVEAPFL*AKIGNI Trigger: GATGTTTCCTATCTTAGCCAACAAGAAAGGAGCCTC...GACTTGGGTTGTATTTCTCCTGGTTGTAATTTGTGGAAGGTTTTGAGACGTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093853.5 ENSMUST00000216998.2 |
||
| CDS-3UTR CAA 90 bp | ATTGAAGCAGTTATTAAAAGTCTCTCTCCAAAACAGCCCAGACCTGGACAGATTTCTCCACAGCTATATTaGACCTTTCAAAGAGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: IEAVIKSLSPKQPRPGQISPQLY*TFQRGS Trigger: GGAGCCTCTTTGAAAGGTCAAATATAGCTGTGGAGA...AATCTGTCCAGGTCTGGGCTGTTTTGGAGAGAGACTTTTAATAACTGCTTCAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093853.5 ENSMUST00000216998.2 |
||
| CDS-3UTR CAA 90 bp | TACTTCATTGTTCTGAACTCACAGCAACAAGGAGAAGGTCTTAGGCACAGGAATGTGTTGACTTTGCTTTaGAAGTATTCCATCCACTGG | + |
|
Preference number: 5 (lower is better) Translates to: YFIVLNSQQQGEGLRHRNVLTLL*KYSIHW Trigger: CCAGTGGATGGAATACTTCAAAAGCAAAGTCAACAC...ATTCCTGTGCCTAAGACCTTCTCCTTGTTGCTGTGAGTTCAGAACAATGAAGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 |
||
| CDS-3UTR CAA 90 bp | TGGGCTTCAATTTTGAGCAGAAGGGCAGTGTATGAATGCCTTGTTAAGATGAAGAGGGTAACCATGTTTTaGCCACTGGATGCTGATTTT | + |
|
Preference number: 5 (lower is better) Translates to: WASILSRRAVYECLVKMKRVTMF*PLDADF Trigger: AAAATCAGCATCCAGTGGCAAAAACATGGTTACCCT...CTTCATCTTAACAAGGCATTCATACACTGCCCTTCTGCTCAAAATTGAAGCCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 |
||
| CDS-3UTR CAA 90 bp | TACTTCATTGTTCTGAACTCACAGCAACAAGGAGAAGGTCTTAGGCACAGGAATTCAATGACACCCACATaGAGATCCTGGAAAATATCC | + |
|
Preference number: 5 (lower is better) Translates to: YFIVLNSQQQGEGLRHRNSMTPT*RSWKIS Trigger: GGATATTTTCCAGGATCTCAATGTGGGTGTCATTGA...ATTCCTGTGCCTAAGACCTTCTCCTTGTTGCTGTGAGTTCAGAACAATGAAGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 |
||
| CDS-3UTR CAA 90 bp | ATTGAAGCAGTTATTAAAAGTCTCTCTCCAAAACAGCCCAGACCTGGACAGATTTCTGGTGGGTGGACATaGTTTATGCCATATGCAACT | + |
|
Preference number: 5 (lower is better) Translates to: IEAVIKSLSPKQPRPGQISGGWT*FMPYAT Trigger: AGTTGCATATGGCATAAACAATGTCCACCCACCAGA...AATCTGTCCAGGTCTGGGCTGTTTTGGAGAGAGACTTTTAATAACTGCTTCAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093853.5 |
||
| CDS-3UTR CAA 90 bp | TGGGCTTCAATTTTGAGCAGAAGGGCAGTGTATGAATGCCTTGTTAAGATGAAGGAGACACTAATCGCATaGGATTTTTCCATAATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: WASILSRRAVYECLVKMKETLIA*DFSIIS Trigger: GGAGATTATGGAAAAATCCAATGCGATTAGTGTCTC...CTTCATCTTAACAAGGCATTCATACACTGCCCTTCTGCTCAAAATTGAAGCCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 ENSMUST00000216998.2 |
||
| CDS-3UTR CAA 90 bp | TTGGCACAGCTGCAGGAGTCACTGTATCTTTTAAGTTCAAAGAGTGACTTTCAAACGGACCTCAGTGTGTaGACTTTGCTTTTGAAGTAT | + |
|
Preference number: 5 (lower is better) Translates to: LAQLQESLYLLSSKSDFQTDLSV*TLLLKY Trigger: ATACTTCAAAAGCAAAGTCAACACACTGAGGTCCGT...TTGAAAGTCACTCTTTGAACTTAAAAGATACAGTGACTCCTGCAGCTGTGCCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 |
||
| CDS-3UTR CAA 90 bp | TTGGCACAGCTGCAGGAGTCACTGTATCTTTTAAGTTCAAAGAGTGACTTTCAATCAATGACACCCACATaGAGATCCTGGAAAATATCC | + |
|
Preference number: 5 (lower is better) Translates to: LAQLQESLYLLSSKSDFQSMTPT*RSWKIS Trigger: GGATATTTTCCAGGATCTCAATGTGGGTGTCATTGA...TTGAAAGTCACTCTTTGAACTTAAAAGATACAGTGACTCCTGCAGCTGTGCCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 |
||
| CDS-3UTR CAA 90 bp | TTGGCACAGCTGCAGGAGTCACTGTATCTTTTAAGTTCAAAGAGTGACTTTCAAGAGACACTAATCGCATaGGATTTTTCCATAATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LAQLQESLYLLSSKSDFQETLIA*DFSIIS Trigger: GGAGATTATGGAAAAATCCAATGCGATTAGTGTCTC...TTGAAAGTCACTCTTTGAACTTAAAAGATACAGTGACTCCTGCAGCTGTGCCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 ENSMUST00000216998.2 |
||
| CDS-3UTR CAA 90 bp | AGCAAAGAGATTGAAGCAGTTATTAAAAGTCTCTCTCCAAAACAGCCCAGACCTCTCAGTGTGTTGACTTaGCTTTTGAAGTATTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: SKEIEAVIKSLSPKQPRPLSVLT*LLKYSI Trigger: GATGGAATACTTCAAAAGCAAAGTCAACACACTGAG...AGGTCTGGGCTGTTTTGGAGAGAGACTTTTAATAACTGCTTCAATCTCTTTGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000093853.5 |
||
| CDS-3UTR CAA 90 bp | TTGGCACAGCTGCAGGAGTCACTGTATCTTTTAAGTTCAAAGAGTGACTTTCAACTCAGTGTGTTGACTTaGCTTTTGAAGTATTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: LAQLQESLYLLSSKSDFQLSVLT*LLKYSI Trigger: GATGGAATACTTCAAAAGCAAAGTCAACACACTGAG...TTGAAAGTCACTCTTTGAACTTAAAAGATACAGTGACTCCTGCAGCTGTGCCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 |
||
| CDS GCA 72 bp | CTGCAGGAGGCAGGAGTCCATGCGTTTTTCCAGACGTaGCCACTAGGGATTGCAGATACCATCCCGAGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: LQEAGVHAFFQT*PLGIADTIPSL Trigger: CAAGCTCGGGATGGTATCTGCAATCCCTAGTGGGCACGTCTGGAAAAACGCATGGACTCCTGCCTCCTGCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 ENSMUST00000216998.2 |
||
| CDS CAA 90 bp | AGAGGCACTGCAGGGCATGAGGGTCCCATGACCAAGTTCCAGCGATaGAAGGACACAGGCAACTTGAACATGGTCCGTAGCTTCACAGGG | + |
|
Preference number: 6 (lower is better) Translates to: RGTAGHEGPMTKFQR*KDTGNLNMVRSFTG Trigger: CCCTGTGAAGCTACGGACCATGTTCAAGTTGCCTGTGTCCTTCAATCGCTGGAACTTGGTCATGGGACCCTCATGCCCTGCAGTGCCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 ENSMUST00000216998.2 |
||
| CDS CAA 72 bp | GCAGGGCATGAGGGTCCCATGACCAAGTTCCAGCGATaGAAGGACACAGGCAACTTGAACATGGTCCGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: AGHEGPMTKFQR*KDTGNLNMVRS Trigger: GCTACGGACCATGTTCAAGTTGCCTGTGTCCTTCAATCGCTGGAACTTGGTCATGGGACCCTCATGCCCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 ENSMUST00000216998.2 |
||
| CDS GCA 72 bp | TTTGATTGGAGCCAGACTGCAGGAGGCAGGAGTCCATaGGTTTTTCCAGACGTGCCCACTAGGGATTGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: FDWSQTAGGRSP*VFPDVPTRDCR Trigger: TCTGCAATCCCTAGTGGGCACGTCTGGAAAAACGCATGGACTCCTGCCTCCTGCAGTCTGGCTCCAATCAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 ENSMUST00000216998.2 |
||
| CDS GCA 72 bp | TCCACGGCAAGTTGGTGTTGCAGTTTCCCACTCTCATaGAGGTCCACGGACCTCAGTGTGTTGACTTTGCTT | + |
|
Preference number: 6 (lower is better) Translates to: STASWCCSFPLS*RSTDLSVLTLL Trigger: AAGCAAAGTCAACACACTGAGGTCCGTGGACCTGCATGAGAGTGGGAAACTGCAACACCAACTTGCCGTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 |
||
| CDS GCA 72 bp | AGTCCATGCGTTTTTCCAGACGTGCCCACTAGGGATTaGAGATACCATCCCGAGCTTGCATTTCTCCTTCAC | + |
|
Preference number: 6 (lower is better) Translates to: SPCVFPDVPTRD*RYHPELAFLLH Trigger: GTGAAGGAGAAATGCAAGCTCGGGATGGTATCTGCAATCCCTAGTGGGCACGTCTGGAAAAACGCATGGACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 ENSMUST00000216998.2 |
||
| CDS CAA 72 bp | TTCCCACTCTCATGCAGGTCCACGGACCTCAGTGTGTaGACTTTGCTTTTGAAGTATTCCATCCACTGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: FPLSCRSTDLSV*TLLLKYSIHWR Trigger: CCGCCAGTGGATGGAATACTTCAAAAGCAAAGTCAACACACTGAGGTCCGTGGACCTGCATGAGAGTGGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 |
||
| CDS CAA 90 bp | AGTTTCCCACTCTCATGCAGGTCCACGGACCTCAGTGTGTTGACTTaGCTTTTGAAGTATTCCATCCACTGGCGGATTGTGGAATCACCC | + |
|
Preference number: 6 (lower is better) Translates to: SFPLSCRSTDLSVLT*LLKYSIHWRIVESP Trigger: GGGTGATTCCACAATCCGCCAGTGGATGGAATACTTCAAAAGCAAAGTCAACACACTGAGGTCCGTGGACCTGCATGAGAGTGGGAAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 |
||
| CDS CAA 72 bp | CTCTCATGCAGGTCCACGGACCTCAGTGTGTTGACTTaGCTTTTGAAGTATTCCATCCACTGGCGGATTGTG | + |
|
Preference number: 6 (lower is better) Translates to: LSCRSTDLSVLT*LLKYSIHWRIV Trigger: CACAATCCGCCAGTGGATGGAATACTTCAAAAGCAAAGTCAACACACTGAGGTCCGTGGACCTGCATGAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 |
||
| CDS CAA 90 bp | CCACTCTCATGCAGGTCCACGGACCTCAGTGTGTTGACTTTGCTTTaGAAGTATTCCATCCACTGGCGGATTGTGGAATCACCCATTAGA | + |
|
Preference number: 6 (lower is better) Translates to: PLSCRSTDLSVLTLL*KYSIHWRIVESPIR Trigger: TCTAATGGGTGATTCCACAATCCGCCAGTGGATGGAATACTTCAAAAGCAAAGTCAACACACTGAGGTCCGTGGACCTGCATGAGAGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 |
||
| CDS CAA 90 bp | TGTTGCAGTTTCCCACTCTCATGCAGGTCCACGGACCTCAGTGTGTaGACTTTGCTTTTGAAGTATTCCATCCACTGGCGGATTGTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: CCSFPLSCRSTDLSV*TLLLKYSIHWRIVE Trigger: TTCCACAATCCGCCAGTGGATGGAATACTTCAAAAGCAAAGTCAACACACTGAGGTCCGTGGACCTGCATGAGAGTGGGAAACTGCAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 |
||
| CDS TCA 72 bp | GATAGGAAACATCCTTGTTCTTTGACTGCATGTAGGTaGGAGCTGCACAGGGCACATTTGGAGGCTTCACAC | + |
|
Preference number: 6 (lower is better) Translates to: DRKHPCSLTACR*ELHRAHLEASH Trigger: GTGTGAAGCCTCCAAATGTGCCCTGTGCAGCTCTCACCTACATGCAGTCAAAGAACAAGGATGTTTCCTATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 ENSMUST00000216998.2 |
||
| CDS CAA 72 bp | TGCAGGTCCACGGACCTCAGTGTGTTGACTTTGCTTTaGAAGTATTCCATCCACTGGCGGATTGTGGAATCA | + |
|
Preference number: 6 (lower is better) Translates to: CRSTDLSVLTLL*KYSIHWRIVES Trigger: TGATTCCACAATCCGCCAGTGGATGGAATACTTCAAAAGCAAAGTCAACACACTGAGGTCCGTGGACCTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 |
||
| CDS CCA 72 bp | TGCAGATACCATCCCGAGCTTGCATTTCTCCTTCACTaGAGCTGTGTCTGTGTTGCATTTGGAGACACTAAT | + |
|
Preference number: 6 (lower is better) Translates to: CRYHPELAFLLH*SCVCVAFGDTN Trigger: ATTAGTGTCTCCAAATGCAACACAGACACAGCTCCAGTGAAGGAGAAATGCAAGCTCGGGATGGTATCTGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 ENSMUST00000216998.2 |
||
| CDS CAA 90 bp | CCGAGCTTGCATTTCTCCTTCACTGGAGCTGTGTCTGTGTTGCATTaGGAGACACTAATCGCATTGGATTTTTCCATAATCTCCACAGCT | + |
|
Preference number: 6 (lower is better) Translates to: PSLHFSFTGAVSVLH*ETLIALDFSIISTA Trigger: AGCTGTGGAGATTATGGAAAAATCCAATGCGATTAGTGTCTCCAAATGCAACACAGACACAGCTCCAGTGAAGGAGAAATGCAAGCTCGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 ENSMUST00000216998.2 |
||
| CDS CAA 90 bp | ACCATCCCGAGCTTGCATTTCTCCTTCACTGGAGCTGTGTCTGTGTaGCATTTGGAGACACTAATCGCATTGGATTTTTCCATAATCTCC | + |
|
Preference number: 6 (lower is better) Translates to: TIPSLHFSFTGAVSV*HLETLIALDFSIIS Trigger: GGAGATTATGGAAAAATCCAATGCGATTAGTGTCTCCAAATGCAACACAGACACAGCTCCAGTGAAGGAGAAATGCAAGCTCGGGATGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 ENSMUST00000216998.2 |
||
| CDS TCA 72 bp | TTCTTGTTGGCTAAGATAGGAAACATCCTTGTTCTTTaGCTGCATGTAGGTGAGAGCTGCACAGGGCACATT | + |
|
Preference number: 6 (lower is better) Translates to: FLLAKIGNILVL*LHVGESCTGHI Trigger: AATGTGCCCTGTGCAGCTCTCACCTACATGCAGTCAAAGAACAAGGATGTTTCCTATCTTAGCCAACAAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 ENSMUST00000216998.2 |
||
| CDS CAA 72 bp | AGCTTGCATTTCTCCTTCACTGGAGCTGTGTCTGTGTaGCATTTGGAGACACTAATCGCATTGGATTTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: SLHFSFTGAVSV*HLETLIALDFS Trigger: GGAAAAATCCAATGCGATTAGTGTCTCCAAATGCAACACAGACACAGCTCCAGTGAAGGAGAAATGCAAGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 ENSMUST00000216998.2 |
||
| CDS CAA 72 bp | CATTTCTCCTTCACTGGAGCTGTGTCTGTGTTGCATTaGGAGACACTAATCGCATTGGATTTTTCCATAATC | + |
|
Preference number: 6 (lower is better) Translates to: HFSFTGAVSVLH*ETLIALDFSII Trigger: GATTATGGAAAAATCCAATGCGATTAGTGTCTCCAAATGCAACACAGACACAGCTCCAGTGAAGGAGAAATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 ENSMUST00000216998.2 |
||
| CDS CAA 72 bp | GCTGTGTCTGTGTTGCATTTGGAGACACTAATCGCATaGGATTTTTCCATAATCTCCACAGCTATATTTGAC | + |
|
Preference number: 6 (lower is better) Translates to: AVSVLHLETLIA*DFSIISTAIFD Trigger: GTCAAATATAGCTGTGGAGATTATGGAAAAATCCAATGCGATTAGTGTCTCCAAATGCAACACAGACACAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000093853.5 ENSMUST00000215780.2 ENSMUST00000216998.2 |
||
| CDS TCA 72 bp | AACATAGTTTCTGAAAGAGCCTTGAATAGCTTATACTaGGACATACTGTTGACTTTGCTTTTGAAGTATTCC | + |
|
Preference number: 6 (lower is better) Translates to: NIVSERALNSLY*DILLTLLLKYS Trigger: GGAATACTTCAAAAGCAAAGTCAACAGTATGTCTCAGTATAAGCTATTCAAGGCTCTTTCAGAAACTATGTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216998.2 |
||