Pregenerated sensors for NXPE3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000075033Ensembl transcript IDs: ENSMUST00000099705.5
Found 151 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAGTCCACAGAGATCTGCCTGCCTCTACCTCCCAAGTCCTGGGATTaGAAGCATATGCCACACCTGGCCTTTACTCTTTGTGTGTTTCTG | + |
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Preference number: 1 (lower is better) Translates to: ESTEICLPLPPKSWD*KHMPHLAFTLCVFL Trigger: CAGAAACACACAAAGAGTAAAGGCCAGGTGTGGCATATGCTTTCAATCCCAGGACTTGGGAGGTAGAGGCAGGCAGATCTCTGTGGACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| 3UTR GCA 90 bp | AGATCTGCCTGCCTCTACCTCCCAAGTCCTGGGATTGAAAGCATATaGCACACCTGGCCTTTACTCTTTGTGTGTTTCTGCGTGTCAGTG | + |
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Preference number: 1 (lower is better) Translates to: RSACLYLPSPGIESI*HTWPLLFVCFCVSV Trigger: CACTGACACGCAGAAACACACAAAGAGTAAAGGCCAGGTGTGGCATATGCTTTCAATCCCAGGACTTGGGAGGTAGAGGCAGGCAGATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| 3UTR GCA 90 bp | AGAACTATACAAACAAGGCTGGCCTTGAGTCCACAGAGATCTGCCTaGCTCTACCTCCCAAGTCCTGGGATTGAAAGCATATGCCACACC | + |
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Preference number: 1 (lower is better) Translates to: RTIQTRLALSPQRSA*LYLPSPGIESICHT Trigger: GGTGTGGCATATGCTTTCAATCCCAGGACTTGGGAGGTAGAGGCAGGCAGATCTCTGTGGACTCAAGGCCAGCCTTGTTTGTATAGTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| 3UTR GCA 90 bp | ATTGGGAGTATCCATTTCGCAATGGAGTCGATCACAGATTATCTATaGTGCAGGTCAATTGGAAAGGTCACTGGACGTGATTGCTCCAGT | + |
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Preference number: 1 (lower is better) Translates to: IGSIHFAMESITDYL*CRSIGKVTGRDCSS Trigger: ACTGGAGCAATCACGTCCAGTGACCTTTCCAATTGACCTGCAGCATAGATAATCTGTGATCGACTCCATTGCGAAATGGATACTCCCAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| 3UTR GCA 90 bp | TCGAGACGGAAAAATCCTATAGGTAGCTACAAACGCAGCCTACACTaGCTACGTTCATTACCAGTCATTATGCAAAGGACAGCTCTTTTC | + |
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Preference number: 1 (lower is better) Translates to: SRRKNPIGSYKRSLH*LRSLPVIMQRTALF Trigger: GAAAAGAGCTGTCCTTTGCATAATGACTGGTAATGAACGTAGGCAGTGTAGGCTGCGTTTGTAGCTACCTATAGGATTTTTCCGTCTCGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| 3UTR TCA 90 bp | GAAGAAATAGCAGATAGCTCAATAGTGGCTCCTTACATGCAAGCATaGGACAGACAATGGGTATGCAGACTTTATGCCCAAGTCAAGAAA | + |
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Preference number: 1 (lower is better) Translates to: EEIADSSIVAPYMQA*DRQWVCRLYAQVKK Trigger: TTTCTTGACTTGGGCATAAAGTCTGCATACCCATTGTCTGTCTCATGCTTGCATGTAAGGAGCCACTATTGAGCTATCTGCTATTTCTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| 3UTR-3UTR CCA 90 bp | GGGATTGAAAGCATATGCCACACCTGGCCTTTACTCTTTGTGTGTTTCTGCGTGTCGCCCTGGCTGTCCTaGAACTCAGTCTGTAGACCA | + |
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Preference number: 2 (lower is better) Translates to: GIESICHTWPLLFVCFCVSPWLS*NSVCRP Trigger: TGGTCTACAGACTGAGTTCCAGGACAGCCAGGGCGA...CACGCAGAAACACACAAAGAGTAAAGGCCAGGTGTGGCATATGCTTTCAATCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| 3UTR-3UTR GCA 90 bp | TTGGAGGCTGGGATTCAGACTCGGTCCTCTGGAAACTGGACTCTGAGCCATCTCATTGTCAAGACCTTGTaGAACCAAGCTGAAAGGCAA | + |
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Preference number: 2 (lower is better) Translates to: LEAGIQTRSSGNWTLSHLIVKTL*NQAERQ Trigger: TTGCCTTTCAGCTTGGTTGCACAAGGTCTTGACAAT...GAGATGGCTCAGAGTCCAGTTTCCAGAGGACCGAGTCTGAATCCCAGCCTCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| 3UTR-3UTR CCA 90 bp | TACTCTTTGTGTGTTTCTGCGTGTCAGTGTGAACGAATGCCACAAGGATGCAGGGTAAGCCACTTGGCTTaGAGGCTGGGATTCAGACTC | + |
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Preference number: 2 (lower is better) Translates to: YSLCVSACQCERMPQGCRVSHLA*RLGFRL Trigger: GAGTCTGAATCCCAGCCTCCAAGCCAAGTGGCTTAC...CCTGCATCCTTGTGGCATTCGTTCACACTGACACGCAGAAACACACAAAGAGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| 3UTR-3UTR CCA 90 bp | CATGACAGCCAAAAAGCAAAGGGGAAACAGCTGGAACTGCTGAGGGCAGAAACCGTTAGATCTCTAGGATaGCTAAGTCGAGACGGAAAA | + |
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Preference number: 2 (lower is better) Translates to: HDSQKAKGKQLELLRAETVRSLG*LSRDGK Trigger: TTTTCCGTCTCGACTTAGCCATCCTAGAGATCTAAC...GGTTTCTGCCCTCAGCAGTTCCAGCTGTTTCCCCTTTGCTTTTTGGCTGTCATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| 3UTR CAA 90 bp | ATTTCGCAATGGAGTCGATCACAGATTATCTATGCTGCAGGTCAATaGGAAAGGTCACTGGACGTGATTGCTCCAGTGTCCTTGAGGACA | + |
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Preference number: 2 (lower is better) Translates to: ISQWSRSQIIYAAGQ*ERSLDVIAPVSLRT Trigger: TGTCCTCAAGGACACTGGAGCAATCACGTCCAGTGACCTTTCCAATTGACCTGCAGCATAGATAATCTGTGATCGACTCCATTGCGAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| 3UTR-3UTR GCA 90 bp | GGGATTGAAAGCATATGCCACACCTGGCCTTTACTCTTTGTGTGTTTCTGCGTGGACAGACAATGGGTATaGAGACTTTATGCCCAAGTC | + |
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Preference number: 2 (lower is better) Translates to: GIESICHTWPLLFVCFCVDRQWV*RLYAQV Trigger: GACTTGGGCATAAAGTCTGCATACCCATTGTCTGTC...CACGCAGAAACACACAAAGAGTAAAGGCCAGGTGTGGCATATGCTTTCAATCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| 3UTR-3UTR GCA 90 bp | TTTCATGACAGCCAAAAAGCAAAGGGGAAACAGCTGGAACTGCTGAGGGCAGAAGAAATAGTTCTCCAGTaGCCATACCAATCCAAAGCA | + |
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Preference number: 2 (lower is better) Translates to: FHDSQKAKGKQLELLRAEEIVLQ*PYQSKA Trigger: TGCTTTGGATTGGTATGGGCACTGGAGAACTATTTC...TTCTGCCCTCAGCAGTTCCAGCTGTTTCCCCTTTGCTTTTTGGCTGTCATGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| 3UTR-3UTR CCA 90 bp | TTTCATGACAGCCAAAAAGCAAAGGGGAAACAGCTGGAACTGCTGAGGGCAGAATCTGACCACACACATTaGCCTTTACAAGTGATTGAG | + |
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Preference number: 2 (lower is better) Translates to: FHDSQKAKGKQLELLRAESDHTH*PLQVIE Trigger: CTCAATCACTTGTAAAGGCCAATGTGTGTGGTCAGA...TTCTGCCCTCAGCAGTTCCAGCTGTTTCCCCTTTGCTTTTTGGCTGTCATGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| 3UTR-3UTR CCA 90 bp | TCCTTACATGCAAGCATGAGACAGACAATGGGTATGCAGACTTTATGCCCAAGTAAAGCATCTCTTAAATaGCATCAGCATGTCACCCCC | + |
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Preference number: 2 (lower is better) Translates to: SLHASMRQTMGMQTLCPSKASLK*HQHVTP Trigger: GGGGGTGACATGCTGATGCCATTTAAGAGATGCTTT...ACTTGGGCATAAAGTCTGCATACCCATTGTCTGTCTCATGCTTGCATGTAAGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| 3UTR-3UTR CCA 90 bp | TTTCATGACAGCCAAAAAGCAAAGGGGAAACAGCTGGAACTGCTGAGGGCAGAATGGGTGCTCTTTCGTTaGACGTCTTTTGAGATAAAA | + |
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Preference number: 2 (lower is better) Translates to: FHDSQKAKGKQLELLRAEWVLFR*TSFEIK Trigger: TTTTATCTCAAAAGACGTCCAACGAAAGAGCACCCA...TTCTGCCCTCAGCAGTTCCAGCTGTTTCCCCTTTGCTTTTTGGCTGTCATGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| 3UTR-3UTR GCA 90 bp | TTTCATGACAGCCAAAAAGCAAAGGGGAAACAGCTGGAACTGCTGAGGGCAGAACATTACCAGTCATTATaGAAAGGACAGCTCTTTTCT | + |
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Preference number: 2 (lower is better) Translates to: FHDSQKAKGKQLELLRAEHYQSL*KGQLFS Trigger: AGAAAAGAGCTGTCCTTTGCATAATGACTGGTAATG...TTCTGCCCTCAGCAGTTCCAGCTGTTTCCCCTTTGCTTTTTGGCTGTCATGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| 3UTR-3UTR CCA 90 bp | GTATTTGGGTATAAGAAGCAACATCCTCCCATATATCTGAAATCATTTCTAGGCTCAGACTCGGTCCTCTaGAAACTGGACTCTGAGCCA | + |
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Preference number: 2 (lower is better) Translates to: VFGYKKQHPPIYLKSFLGSDSVL*KLDSEP Trigger: TGGCTCAGAGTCCAGTTTCCAGAGGACCGAGTCTGA...GCCTAGAAATGATTTCAGATATATGGGAGGATGTTGCTTCTTATACCCAAATAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| 3UTR-3UTR TCA 90 bp | TCCTTACATGCAAGCATGAGACAGACAATGGGTATGCAGACTTTATGCCCAAGTCCTCATATAAAATTCTaGCCACACACATTGGCCTTT | + |
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Preference number: 2 (lower is better) Translates to: SLHASMRQTMGMQTLCPSPHIKF*PHTLAF Trigger: AAAGGCCAATGTGTGTGGTCAGAATTTTATATGAGG...ACTTGGGCATAAAGTCTGCATACCCATTGTCTGTCTCATGCTTGCATGTAAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| 3UTR-3UTR GCA 90 bp | GGCACAGTATTTGGGTATAAGAAGCAACATCCTCCCATATATCTGAAATCATTTCAGCTTCCTAGTGTGTaGAAGGCCCTAGACTTGAAC | + |
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Preference number: 2 (lower is better) Translates to: GTVFGYKKQHPPIYLKSFQLPSV*KALDLN Trigger: GTTCAAGTCTAGGGCCTTGCACACACTAGGAAGCTG...AAATGATTTCAGATATATGGGAGGATGTTGCTTCTTATACCCAAATACTGTGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| 3UTR-3UTR TCA 90 bp | TCCTTACATGCAAGCATGAGACAGACAATGGGTATGCAGACTTTATGCCCAAGTATCTGGTTTCACGTCTaGTTTCGGCATATATTTCAT | + |
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Preference number: 2 (lower is better) Translates to: SLHASMRQTMGMQTLCPSIWFHV*FRHIFH Trigger: ATGAAATATATGCCGAAATCAGACGTGAAACCAGAT...ACTTGGGCATAAAGTCTGCATACCCATTGTCTGTCTCATGCTTGCATGTAAGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| 3UTR-3UTR TCA 90 bp | GTATTTGGGTATAAGAAGCAACATCCTCCCATATATCTGAAATCATTTCTAGGCATGGTGAGCGGTGCTTaGAATTTCACTGGGAAAGAA | + |
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Preference number: 2 (lower is better) Translates to: VFGYKKQHPPIYLKSFLGMVSGA*NFTGKE Trigger: TTCTTTCCCAGTGAAATTTCAAGCACCGCTCACCAT...GCCTAGAAATGATTTCAGATATATGGGAGGATGTTGCTTCTTATACCCAAATAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| 3UTR-3UTR CCA 90 bp | GGCACAGTATTTGGGTATAAGAAGCAACATCCTCCCATATATCTGAAATCATTTAGCATATGCCACACCTaGCCTTTACTCTTTGTGTGT | + |
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Preference number: 2 (lower is better) Translates to: GTVFGYKKQHPPIYLKSFSICHT*PLLFVC Trigger: ACACACAAAGAGTAAAGGCCAGGTGTGGCATATGCT...AAATGATTTCAGATATATGGGAGGATGTTGCTTCTTATACCCAAATACTGTGCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| 3UTR CAA 90 bp | GAAGTAATAGATAAGCAATGTTACTTCTCTAGATCAATCTTTCCTTaGTCACTGTTTCTCAAAGTGTGGAGCCCTACGACTGCACTAGAA | + |
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Preference number: 2 (lower is better) Translates to: EVIDKQCYFSRSIFP*SLFLKVWSPTTALE Trigger: TTCTAGTGCAGTCGTAGGGCTCCACACTTTGAGAAACAGTGACAAAGGAAAGATTGATCTAGAGAAGTAACATTGCTTATCTATTACTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| 3UTR-3UTR TCA 90 bp | GTATTTGGGTATAAGAAGCAACATCCTCCCATATATCTGAAATCATTTCTAGGCTCGGCATATATTTCATaGCAGCCAAAAAGCAAAGGG | + |
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Preference number: 2 (lower is better) Translates to: VFGYKKQHPPIYLKSFLGSAYIS*QPKSKG Trigger: CCCTTTGCTTTTTGGCTGTCATGAAATATATGCCGA...GCCTAGAAATGATTTCAGATATATGGGAGGATGTTGCTTCTTATACCCAAATAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| 3UTR-3UTR GCA 90 bp | GGCACAGTATTTGGGTATAAGAAGCAACATCCTCCCATATATCTGAAATCATTTGGCAGCAATACCGTGTaGAGATGCAATAAGTTAGAT | + |
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Preference number: 2 (lower is better) Translates to: GTVFGYKKQHPPIYLKSFGSNTV*RCNKLD Trigger: ATCTAACTTATTGCATCTGCACACGGTATTGCTGCC...AAATGATTTCAGATATATGGGAGGATGTTGCTTCTTATACCCAAATACTGTGCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| 3UTR-3UTR CCA 90 bp | GGCACAGTATTTGGGTATAAGAAGCAACATCCTCCCATATATCTGAAATCATTTCAGCTCTTTTCTGAATaGCAAACCGATTGGGAGTAT | + |
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Preference number: 2 (lower is better) Translates to: GTVFGYKKQHPPIYLKSFQLFSE*QTDWEY Trigger: ATACTCCCAATCGGTTTGCCATTCAGAAAAGAGCTG...AAATGATTTCAGATATATGGGAGGATGTTGCTTCTTATACCCAAATACTGTGCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| 3UTR-3UTR TCA 90 bp | GGCACAGTATTTGGGTATAAGAAGCAACATCCTCCCATATATCTGAAATCATTTGTCAATAGAAACTCCTaGGATACAACAGTCTTCATT | + |
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Preference number: 2 (lower is better) Translates to: GTVFGYKKQHPPIYLKSFVNRNS*DTTVFI Trigger: AATGAAGACTGTTGTATCTCAGGAGTTTCTATTGAC...AAATGATTTCAGATATATGGGAGGATGTTGCTTCTTATACCCAAATACTGTGCC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| 3UTR-3UTR GCA 90 bp | GGCACAGTATTTGGGTATAAGAAGCAACATCCTCCCATATATCTGAAATCATTTATCACAGATTATCTATaGTGCAGGTCAATTGGAAAG | + |
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Preference number: 2 (lower is better) Translates to: GTVFGYKKQHPPIYLKSFITDYL*CRSIGK Trigger: CTTTCCAATTGACCTGCAGCATAGATAATCTGTGAT...AAATGATTTCAGATATATGGGAGGATGTTGCTTCTTATACCCAAATACTGTGCC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| 3UTR TCA 72 bp | CTGGGATTCAGACTCGGTCCTCTGGAAACTGGACTCTaGGCCATCTCCCCATCCCCACAGCTGTCTTGGGAG | + |
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Preference number: 3 (lower is better) Translates to: LGFRLGPLETGL*AISPSPQLSWE Trigger: CTCCCAAGACAGCTGTGGGGATGGGGAGATGGCTCAGAGTCCAGTTTCCAGAGGACCGAGTCTGAATCCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| 3UTR CCA 72 bp | TTGGAGGCTGGGATTCAGACTCGGTCCTCTGGAAACTaGACTCTGAGCCATCTCCCCATCCCCACAGCTGTC | + |
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Preference number: 3 (lower is better) Translates to: LEAGIQTRSSGN*TLSHLPIPTAV Trigger: GACAGCTGTGGGGATGGGGAGATGGCTCAGAGTCCAGTTTCCAGAGGACCGAGTCTGAATCCCAGCCTCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| 3UTR CCA 72 bp | ACTTGGCTTGGAGGCTGGGATTCAGACTCGGTCCTCTaGAAACTGGACTCTGAGCCATCTCCCCATCCCCAC | + |
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Preference number: 3 (lower is better) Translates to: TWLGGWDSDSVL*KLDSEPSPHPH Trigger: GTGGGGATGGGGAGATGGCTCAGAGTCCAGTTTCCAGAGGACCGAGTCTGAATCCCAGCCTCCAAGCCAAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| 3UTR CCA 72 bp | GGACGGACAGACAGATGGGCTGGAGGTTTAGCTCAGTaGTCCACTCCGTATCTAGCACAGTGTCCCACAAAG | + |
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Preference number: 3 (lower is better) Translates to: GRTDRWAGGLAQ*STPYLAQCPTK Trigger: CTTTGTGGGACACTGTGCTAGATACGGAGTGGACCACTGAGCTAAACCTCCAGCCCATCTGTCTGTCCGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| 3UTR GCA 72 bp | ACTCTTTGTGTGTTTCTGCGTGTCAGTGTGAACGAATaGCACAAGGATGCAGGCACACTGAGGCTCTGGACC | + |
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Preference number: 3 (lower is better) Translates to: TLCVFLRVSVNE*HKDAGTLRLWT Trigger: GGTCCAGAGCCTCAGTGTGCCTGCATCCTTGTGGCATTCGTTCACACTGACACGCAGAAACACACAAAGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| 3UTR GCA 72 bp | CAAACAAGGCTGGCCTTGAGTCCACAGAGATCTGCCTaGCTCTACCTCCCAAGTCCTGGGATTGAAAGCATA | + |
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Preference number: 3 (lower is better) Translates to: QTRLALSPQRSA*LYLPSPGIESI Trigger: TATGCTTTCAATCCCAGGACTTGGGAGGTAGAGGCAGGCAGATCTCTGTGGACTCAAGGCCAGCCTTGTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| 3UTR CCA 72 bp | AGTGTCAGTTACTGGTCGTCTGTAAGCCACTTGGCTTaGAGGCTGGGATTCAGACTCGGTCCTCTGGAAACT | + |
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Preference number: 3 (lower is better) Translates to: SVSYWSSVSHLA*RLGFRLGPLET Trigger: AGTTTCCAGAGGACCGAGTCTGAATCCCAGCCTCCAAGCCAAGTGGCTTACAGACGACCAGTAACTGACACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| 3UTR TCA 72 bp | GAGATCTGCCTGCCTCTACCTCCCAAGTCCTGGGATTaGAAGCATATGCCACACCTGGCCTTTACTCTTTGT | + |
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Preference number: 3 (lower is better) Translates to: EICLPLPPKSWD*KHMPHLAFTLC Trigger: ACAAAGAGTAAAGGCCAGGTGTGGCATATGCTTTCAATCCCAGGACTTGGGAGGTAGAGGCAGGCAGATCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| 3UTR GCA 72 bp | TGCCTCTACCTCCCAAGTCCTGGGATTGAAAGCATATaGCACACCTGGCCTTTACTCTTTGTGTGTTTCTGC | + |
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Preference number: 3 (lower is better) Translates to: CLYLPSPGIESI*HTWPLLFVCFC Trigger: GCAGAAACACACAAAGAGTAAAGGCCAGGTGTGGCATATGCTTTCAATCCCAGGACTTGGGAGGTAGAGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| 3UTR CCA 72 bp | CTCCCAAGTCCTGGGATTGAAAGCATATGCCACACCTaGCCTTTACTCTTTGTGTGTTTCTGCGTGTCAGTG | + |
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Preference number: 3 (lower is better) Translates to: LPSPGIESICHT*PLLFVCFCVSV Trigger: CACTGACACGCAGAAACACACAAAGAGTAAAGGCCAGGTGTGGCATATGCTTTCAATCCCAGGACTTGGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| 3UTR TCA 72 bp | CCACAGGAACCTCTAGCAAGAATCCCTCTCTATTCCTaGGGAGGGCACATTCATGAAGACCTGTTCAAATGC | + |
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Preference number: 3 (lower is better) Translates to: PQEPLARIPLYS*GGHIHEDLFKC Trigger: GCATTTGAACAGGTCTTCATGAATGTGCCCTCCTCAGGAATAGAGAGGGATTCTTGCTAGAGGTTCCTGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| 3UTR TCA 72 bp | CATCAGCCATGGAGACCAATCGCTGTGAACCAATGGTaGGCGGTGCTTGAAATTTCACTGGGAAAGAAACTC | + |
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Preference number: 3 (lower is better) Translates to: HQPWRPIAVNQW*AVLEISLGKKL Trigger: GAGTTTCTTTCCCAGTGAAATTTCAAGCACCGCTCACCATTGGTTCACAGCGATTGGTCTCCATGGCTGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| 3UTR TCA 72 bp | CACAGCTGTCTTGGGAGTGCGACCCATCCTGTAATGTaGGGTGAAGCTTTTCTTACCTGTGATGTCAAGTAC | + |
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Preference number: 3 (lower is better) Translates to: HSCLGSATHPVM*GEAFLTCDVKY Trigger: GTACTTGACATCACAGGTAAGAAAAGCTTCACCTCACATTACAGGATGGGTCGCACTCCCAAGACAGCTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| 3UTR-3UTR CAA 90 bp | GATACAACAGTCTTCATTGTGGCCACAGGAACCTCTAGCAAGAATCCCTCTCTATATGCTGCAGGTCAATaGGAAAGGTCACTGGACGTG | + |
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Preference number: 3 (lower is better) Translates to: DTTVFIVATGTSSKNPSLYAAGQ*ERSLDV Trigger: CACGTCCAGTGACCTTTCCAATTGACCTGCAGCATA...TAGAGAGGGATTCTTGCTAGAGGTTCCTGTGGCCACAATGAAGACTGTTGTATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| 3UTR-3UTR CAA 90 bp | TACTCTTTGTGTGTTTCTGCGTGTCAGTGTGAACGAATGCCACAAGGATGCAGGGACCGTGCTATCAAATaGTCAAGACCTTGTGCAACC | + |
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Preference number: 3 (lower is better) Translates to: YSLCVSACQCERMPQGCRDRAIK*SRPCAT Trigger: GGTTGCACAAGGTCTTGACAATTTGATAGCACGGTC...CCTGCATCCTTGTGGCATTCGTTCACACTGACACGCAGAAACACACAAAGAGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| 3UTR-3UTR CAA 90 bp | TACTCTTTGTGTGTTTCTGCGTGTCAGTGTGAACGAATGCCACAAGGATGCAGGAATGGTGAGCGGTGCTaGAAATTTCACTGGGAAAGA | + |
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Preference number: 3 (lower is better) Translates to: YSLCVSACQCERMPQGCRNGERC*KFHWER Trigger: TCTTTCCCAGTGAAATTTCAAGCACCGCTCACCATT...CCTGCATCCTTGTGGCATTCGTTCACACTGACACGCAGAAACACACAAAGAGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| 3UTR GCA 72 bp | GCAGCCTACACTGCCTACGTTCATTACCAGTCATTATaGAAAGGACAGCTCTTTTCTGAATGGCAAACCGAT | + |
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Preference number: 3 (lower is better) Translates to: AAYTAYVHYQSL*KGQLFSEWQTD Trigger: ATCGGTTTGCCATTCAGAAAAGAGCTGTCCTTTGCATAATGACTGGTAATGAACGTAGGCAGTGTAGGCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| 3UTR-3UTR CAA 90 bp | TCCTTACATGCAAGCATGAGACAGACAATGGGTATGCAGACTTTATGCCCAAGTATACAACAGTCTTCATaGTGGCCACAGGAACCTCTA | + |
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Preference number: 3 (lower is better) Translates to: SLHASMRQTMGMQTLCPSIQQSS*WPQEPL Trigger: TAGAGGTTCCTGTGGCCACAATGAAGACTGTTGTAT...ACTTGGGCATAAAGTCTGCATACCCATTGTCTGTCTCATGCTTGCATGTAAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| 3UTR-3UTR CAA 90 bp | GGCACAGTATTTGGGTATAAGAAGCAACATCCTCCCATATATCTGAAATCATTTCAAACAAGGCTGGCCTaGAGTCCACAGAGATCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: GTVFGYKKQHPPIYLKSFQTRLA*SPQRSA Trigger: GGCAGATCTCTGTGGACTCAAGGCCAGCCTTGTTTG...AAATGATTTCAGATATATGGGAGGATGTTGCTTCTTATACCCAAATACTGTGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
||
| 3UTR GCA 72 bp | ATCCATTTCGCAATGGAGTCGATCACAGATTATCTATaGTGCAGGTCAATTGGAAAGGTCACTGGACGTGAT | + |
|
Preference number: 3 (lower is better) Translates to: IHFAMESITDYL*CRSIGKVTGRD Trigger: ATCACGTCCAGTGACCTTTCCAATTGACCTGCAGCATAGATAATCTGTGATCGACTCCATTGCGAAATGGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
||
| 3UTR TCA 72 bp | GATCTGGTTTCACGTCTGATTTCGGCATATATTTCATaGCAGCCAAAAAGCAAAGGGGAAACAGCTGGAACT | + |
|
Preference number: 3 (lower is better) Translates to: DLVSRLISAYIS*QPKSKGETAGT Trigger: AGTTCCAGCTGTTTCCCCTTTGCTTTTTGGCTGTCATGAAATATATGCCGAAATCAGACGTGAAACCAGATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
||
| 3UTR GCA 72 bp | TTCAGGAGACCGTGCTATCAAATTGTCAAGACCTTGTaGAACCAAGCTGAAAGGCAAATACTGAAAAAGGTC | + |
|
Preference number: 3 (lower is better) Translates to: FRRPCYQIVKTL*NQAERQILKKV Trigger: GACCTTTTTCAGTATTTGCCTTTCAGCTTGGTTGCACAAGGTCTTGACAATTTGATAGCACGGTCTCCTGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
||
| 3UTR-3UTR CAA 90 bp | GGCACAGTATTTGGGTATAAGAAGCAACATCCTCCCATATATCTGAAATCATTTTCCCAAGTCCTGGGATaGAAAGCATATGCCACACCT | + |
|
Preference number: 3 (lower is better) Translates to: GTVFGYKKQHPPIYLKSFSQVLG*KAYATP Trigger: AGGTGTGGCATATGCTTTCAATCCCAGGACTTGGGA...AAATGATTTCAGATATATGGGAGGATGTTGCTTCTTATACCCAAATACTGTGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
||
| 3UTR TCA 72 bp | GTGCTATCAAATTGTCAAGACCTTGTGCAACCAAGCTaGAAGGCAAATACTGAAAAAGGTCACAAGGCATCA | + |
|
Preference number: 3 (lower is better) Translates to: VLSNCQDLVQPS*KANTEKGHKAS Trigger: TGATGCCTTGTGACCTTTTTCAGTATTTGCCTTTCAGCTTGGTTGCACAAGGTCTTGACAATTTGATAGCAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
||
| 3UTR GCA 72 bp | AAAAATCCTATAGGTAGCTACAAACGCAGCCTACACTaGCTACGTTCATTACCAGTCATTATGCAAAGGACA | + |
|
Preference number: 3 (lower is better) Translates to: KNPIGSYKRSLH*LRSLPVIMQRT Trigger: TGTCCTTTGCATAATGACTGGTAATGAACGTAGGCAGTGTAGGCTGCGTTTGTAGCTACCTATAGGATTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
||
| 3UTR-3UTR CAA 90 bp | GTATTTGGGTATAAGAAGCAACATCCTCCCATATATCTGAAATCATTTCTAGGCAAGTTTCAGAAGCCCTaGTCTGAAGTCCATGAGTCC | + |
|
Preference number: 3 (lower is better) Translates to: VFGYKKQHPPIYLKSFLGKFQKP*SEVHES Trigger: GGACTCATGGACTTCAGACAAGGGCTTCTGAAACTT...GCCTAGAAATGATTTCAGATATATGGGAGGATGTTGCTTCTTATACCCAAATAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
||
| 3UTR TCA 72 bp | AAGCAGAGACTGGGTGCTCTTTCGTTGGACGTCTTTTaGGATAAAAGCAGGAACTTGATAATATCCTCATAT | + |
|
Preference number: 3 (lower is better) Translates to: KQRLGALSLDVF*DKSRNLIISSY Trigger: ATATGAGGATATTATCAAGTTCCTGCTTTTATCTCAAAAGACGTCCAACGAAAGAGCACCCAGTCTCTGCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
||
| 3UTR-3UTR CAA 90 bp | GGCACAGTATTTGGGTATAAGAAGCAACATCCTCCCATATATCTGAAATCATTTCACTCATTAGCATCTTaGGTTACAAGGGCAGCAATA | + |
|
Preference number: 3 (lower is better) Translates to: GTVFGYKKQHPPIYLKSFHSLAS*VTRAAI Trigger: TATTGCTGCCCTTGTAACCAAAGATGCTAATGAGTG...AAATGATTTCAGATATATGGGAGGATGTTGCTTCTTATACCCAAATACTGTGCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
||
| 3UTR GCA 72 bp | GCAAGCATGAGACAGACAATGGGTATGCAGACTTTATaGCCAAGTCAAGAAATACTTGTCATGAGTTTTAAT | + |
|
Preference number: 3 (lower is better) Translates to: ASMRQTMGMQTL*PSQEILVMSFN Trigger: ATTAAAACTCATGACAAGTATTTCTTGACTTGGGCATAAAGTCTGCATACCCATTGTCTGTCTCATGCTTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
||
| CDS-3UTR TCA 90 bp | CATGACAGCCAAAAAGCAAAGGGGAAACAGCTGGAACTGCTGAGGGCAGAAACCTCTTCCTGCAGGCGCTaGAGGACTCTGATCCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: HDSQKAKGKQLELLRAETSSCRR*RTLIPS Trigger: TGAAGGGATCAGAGTCCTTCAGCGCCTGCAGGAAGA...GGTTTCTGCCCTCAGCAGTTCCAGCTGTTTCCCCTTTGCTTTTTGGCTGTCATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
||
| CDS-3UTR CCA 90 bp | TTGGAGGCTGGGATTCAGACTCGGTCCTCTGGAAACTGGACTCTGAGCCATCTCGCAGGGGAGTTTCTTTaGTTTGAAGCAGAACCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LEAGIQTRSSGNWTLSHLAGEFL*FEAEPG Trigger: CCCTGGTTCTGCTTCAAACCAAAGAAACTCCCCTGC...GAGATGGCTCAGAGTCCAGTTTCCAGAGGACCGAGTCTGAATCCCAGCCTCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
||
| CDS-3UTR CCA 90 bp | GGGATTGAAAGCATATGCCACACCTGGCCTTTACTCTTTGTGTGTTTCTGCGTGCTTCGGTCCAGGAGTTaGACCACTGCCCGCCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: GIESICHTWPLLFVCFCVLRSRS*TTARLM Trigger: CATCAGGCGGGCAGTGGTCCAACTCCTGGACCGAAG...CACGCAGAAACACACAAAGAGTAAAGGCCAGGTGTGGCATATGCTTTCAATCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
||
| CDS-3UTR TCA 90 bp | TTGGAGGCTGGGATTCAGACTCGGTCCTCTGGAAACTGGACTCTGAGCCATCTCTTGCAGAGTTCAAGATaGCGAAGTAGCTGGAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LEAGIQTRSSGNWTLSHLLQSSR*RSSWRK Trigger: CTTCCTCCAGCTACTTCGTCATCTTGAACTCTGCAA...GAGATGGCTCAGAGTCCAGTTTCCAGAGGACCGAGTCTGAATCCCAGCCTCCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
||
| CDS-3UTR CCA 90 bp | TTGGAGGCTGGGATTCAGACTCGGTCCTCTGGAAACTGGACTCTGAGCCATCTCAAGACGTTGTGTTTCTaGTCCACTGCAAGGAAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LEAGIQTRSSGNWTLSHLKTLCF*STARKG Trigger: TCCCTTCCTTGCAGTGGACCAGAAACACAACGTCTT...GAGATGGCTCAGAGTCCAGTTTCCAGAGGACCGAGTCTGAATCCCAGCCTCCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
||
| CDS-3UTR CCA 90 bp | AGCTACAAACGCAGCCTACACTGCCTACGTTCATTACCAGTCATTATGCAAAGGTCAGGCCCCAGCTCTTaGGCATTGCCTGTCCGGATG | + |
|
Preference number: 4 (lower is better) Translates to: SYKRSLHCLRSLPVIMQRSGPSS*ALPVRM Trigger: CATCCGGACAGGCAATGCCCAAGAGCTGGGGCCTGA...CCTTTGCATAATGACTGGTAATGAACGTAGGCAGTGTAGGCTGCGTTTGTAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
||
| CDS-3UTR TCA 90 bp | ACTCCTGAGATACAACAGTCTTCATTGTGGCCACAGGAACCTCTAGCAAGAATCGGCGCTGAAGGACTCTaGTCCCTTCACTGGGGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: TPEIQQSSLWPQEPLARIGAEGL*SLHWGE Trigger: TTCACCCCAGTGAAGGGATCAGAGTCCTTCAGCGCC...GATTCTTGCTAGAGGTTCCTGTGGCCACAATGAAGACTGTTGTATCTCAGGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
||
| CDS-3UTR TCA 90 bp | TTGGAGGCTGGGATTCAGACTCGGTCCTCTGGAAACTGGACTCTGAGCCATCTCATATTCACACCACTCTaGAAGAGAGCACTTTCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LEAGIQTRSSGNWTLSHLIFTPL*KRALSA Trigger: TGCCGAAAGTGCTCTCTTTCAGAGTGGTGTGAATAT...GAGATGGCTCAGAGTCCAGTTTCCAGAGGACCGAGTCTGAATCCCAGCCTCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
||
| CDS-3UTR GCA 90 bp | GGGATTGAAAGCATATGCCACACCTGGCCTTTACTCTTTGTGTGTTTCTGCGTGTGGAGGAAGGGTCCGTaGTCCTCACAAATGGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: GIESICHTWPLLFVCFCVWRKGP*SSQMGP Trigger: TGGTCCCATTTGTGAGGAGCACGGACCCTTCCTCCA...CACGCAGAAACACACAAAGAGTAAAGGCCAGGTGTGGCATATGCTTTCAATCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
||
| CDS-3UTR CCA 90 bp | TACTCTTTGTGTGTTTCTGCGTGTCAGTGTGAACGAATGCCACAAGGATGCAGGCGTGCTCCTCACAAATaGGACCAGATCCACGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: YSLCVSACQCERMPQGCRRAPHK*DQIHVR Trigger: CCTGACGTGGATCTGGTCCCATTTGTGAGGAGCACG...CCTGCATCCTTGTGGCATTCGTTCACACTGACACGCAGAAACACACAAAGAGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
||
| CDS-3UTR TCA 90 bp | TCGCAATGGAGTCGATCACAGATTATCTATGCTGCAGGTCAATTGGAAAGGTCACGAAAATCCTGCACATaGACCAGCACCTCCAGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: SQWSRSQIIYAAGQLERSRKSCT*TSTSSR Trigger: CCGGCTGGAGGTGCTGGTTCATGTGCAGGATTTTCG...TGACCTTTCCAATTGACCTGCAGCATAGATAATCTGTGATCGACTCCATTGCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
||
| CDS-3UTR TCA 90 bp | GATACAACAGTCTTCATTGTGGCCACAGGAACCTCTAGCAAGAATCCCTCTCTACACTTTCGGCAGCTGTaGGAAGGCCCTTCGTGTATC | + |
|
Preference number: 4 (lower is better) Translates to: DTTVFIVATGTSSKNPSLHFRQL*EGPSCI Trigger: GATACACGAAGGGCCTTCTCACAGCTGCCGAAAGTG...TAGAGAGGGATTCTTGCTAGAGGTTCCTGTGGCCACAATGAAGACTGTTGTATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
||
| CDS-3UTR CCA 90 bp | GATACAACAGTCTTCATTGTGGCCACAGGAACCTCTAGCAAGAATCCCTCTCTACAGGCACCTTCCACTTaGAGGCAGCAAGCAAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: DTTVFIVATGTSSKNPSLQAPST*RQQARH Trigger: ATGCCTTGCTTGCTGCCTCCAAGTGGAAGGTGCCTG...TAGAGAGGGATTCTTGCTAGAGGTTCCTGTGGCCACAATGAAGACTGTTGTATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
||
| CDS-3UTR CCA 90 bp | TTGGAGGCTGGGATTCAGACTCGGTCCTCTGGAAACTGGACTCTGAGCCATCTCAAGAACATGTCCAGCTaGTTCTTCACGATCACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LEAGIQTRSSGNWTLSHLKNMSS*FFTITS Trigger: TGAAGTGATCGTGAAGAACCAGCTGGACATGTTCTT...GAGATGGCTCAGAGTCCAGTTTCCAGAGGACCGAGTCTGAATCCCAGCCTCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
||
| CDS-3UTR GCA 90 bp | CAAGCTGAAAGGCAAATACTGAAAAAGGTCACAAGGCATCAGCCATGGAGACCACTGAAGCCTGTAGCCTaGGAGGAAACATACTGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: QAERQILKKVTRHQPWRPLKPVA*EETYCP Trigger: CGGACAGTATGTTTCCTCGCAGGCTACAGGCTTCAG...TGGTCTCCATGGCTGATGCCTTGTGACCTTTTTCAGTATTTGCCTTTCAGCTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
||
| CDS-3UTR CCA 90 bp | GATACAACAGTCTTCATTGTGGCCACAGGAACCTCTAGCAAGAATCCCTCTCTAGAGACCATACGGCTATaGCCACCACTGTGTTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: DTTVFIVATGTSSKNPSLETIRL*PPLCSS Trigger: GGAAGAACACAGTGGTGGCCATAGCCGTATGGTCTC...TAGAGAGGGATTCTTGCTAGAGGTTCCTGTGGCCACAATGAAGACTGTTGTATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
||
| 3UTR CAA 72 bp | TGGAGTCGATCACAGATTATCTATGCTGCAGGTCAATaGGAAAGGTCACTGGACGTGATTGCTCCAGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: WSRSQIIYAAGQ*ERSLDVIAPVS Trigger: GGACACTGGAGCAATCACGTCCAGTGACCTTTCCAATTGACCTGCAGCATAGATAATCTGTGATCGACTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
||
| 3UTR CAA 72 bp | CCCGAGAAGCCAGTTCTTAACCACTCATTAGCATCTTaGGTTACAAGGGCAGCAATACCGTGTGCAGATGCA | + |
|
Preference number: 4 (lower is better) Translates to: PEKPVLNHSLAS*VTRAAIPCADA Trigger: TGCATCTGCACACGGTATTGCTGCCCTTGTAACCAAAGATGCTAATGAGTGGTTAAGAACTGGCTTCTCGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
||
| CDS-3UTR TCA 90 bp | TCCTTACATGCAAGCATGAGACAGACAATGGGTATGCAGACTTTATGCCCAAGTATCCCTTCACTGGGGTaGACCAGAGATACGGACACT | + |
|
Preference number: 4 (lower is better) Translates to: SLHASMRQTMGMQTLCPSIPSLG*TRDTDT Trigger: AGTGTCCGTATCTCTGGTTCACCCCAGTGAAGGGAT...ACTTGGGCATAAAGTCTGCATACCCATTGTCTGTCTCATGCTTGCATGTAAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
||
| CDS-3UTR GCA 90 bp | GGGATTGAAAGCATATGCCACACCTGGCCTTTACTCTTTGTGTGTTTCTGCGTGAGGTATTCAAACCACTaGCTGATTGTCGAGTCACCG | + |
|
Preference number: 4 (lower is better) Translates to: GIESICHTWPLLFVCFCVRYSNH*LIVESP Trigger: CGGTGACTCGACAATCAGGCAGTGGTTTGAATACCT...CACGCAGAAACACACAAAGAGTAAAGGCCAGGTGTGGCATATGCTTTCAATCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
||
| CDS-3UTR CCA 90 bp | AGCTACAAACGCAGCCTACACTGCCTACGTTCATTACCAGTCATTATGCAAAGGCTCCGCCATACTTCTTaGGCTTCCCTCGAAAATCCT | + |
|
Preference number: 4 (lower is better) Translates to: SYKRSLHCLRSLPVIMQRLRHTS*ASLENP Trigger: AGGATTTTCGAGGGAAGCCCAAGAAGTATGGCGGAG...CCTTTGCATAATGACTGGTAATGAACGTAGGCAGTGTAGGCTGCGTTTGTAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
||
| CDS-3UTR CCA 90 bp | ACTCCTGAGATACAACAGTCTTCATTGTGGCCACAGGAACCTCTAGCAAGAATCGAAATAGACCCTGTCTaGTTTCTCTTCCTGCAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: TPEIQQSSLWPQEPLARIEIDPV*FLFLQA Trigger: CGCCTGCAGGAAGAGAAACCAGACAGGGTCTATTTC...GATTCTTGCTAGAGGTTCCTGTGGCCACAATGAAGACTGTTGTATCTCAGGAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
||
| CDS-3UTR CCA 90 bp | TACTCTTTGTGTGTTTCTGCGTGTCAGTGTGAACGAATGCCACAAGGATGCAGGCCCGCTGGAGTTGATTaGCATCTTGATATTCACACC | + |
|
Preference number: 4 (lower is better) Translates to: YSLCVSACQCERMPQGCRPAGVD*HLDIHT Trigger: GGTGTGAATATCAAGATGCCAATCAACTCCAGCGGG...CCTGCATCCTTGTGGCATTCGTTCACACTGACACGCAGAAACACACAAAGAGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
||
| CDS-3UTR TCA 90 bp | GGCACAGTATTTGGGTATAAGAAGCAACATCCTCCCATATATCTGAAATCATTTGCCGGCTCCCCACCCTaGAGAAGGTTGCAGAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GTVFGYKKQHPPIYLKSFAGSPP*RRLQSS Trigger: TGAACTCTGCAACCTTCTTCAGGGTGGGGAGCCGGC...AAATGATTTCAGATATATGGGAGGATGTTGCTTCTTATACCCAAATACTGTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
||
| CDS-3UTR TCA 90 bp | TCCTTACATGCAAGCATGAGACAGACAATGGGTATGCAGACTTTATGCCCAAGTAGGACAGTGTCCAGCTaGAAGTTGTACCAGTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: SLHASMRQTMGMQTLCPSRTVSS*KLYQSL Trigger: CAGTGACTGGTACAACTTTCAGCTGGACACTGTCCT...ACTTGGGCATAAAGTCTGCATACCCATTGTCTGTCTCATGCTTGCATGTAAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
||
| CDS-3UTR GCA 90 bp | TCCTTACATGCAAGCATGAGACAGACAATGGGTATGCAGACTTTATGCCCAAGTGTGTTTCTGGTCCACTaGAAGGAAGGGACCGACATT | + |
|
Preference number: 4 (lower is better) Translates to: SLHASMRQTMGMQTLCPSVFLVH*KEGTDI Trigger: AATGTCGGTCCCTTCCTTGCAGTGGACCAGAAACAC...ACTTGGGCATAAAGTCTGCATACCCATTGTCTGTCTCATGCTTGCATGTAAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
||
| CDS-3UTR CCA 90 bp | TTTCATGACAGCCAAAAAGCAAAGGGGAAACAGCTGGAACTGCTGAGGGCAGAATTTCTTTCGTTCGCCTaGAAATCACAGTCACCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: FHDSQKAKGKQLELLRAEFLSFA*KSQSPS Trigger: ACTGGGTGACTGTGATTTCCAGGCGAACGAAAGAAA...TTCTGCCCTCAGCAGTTCCAGCTGTTTCCCCTTTGCTTTTTGGCTGTCATGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
||
| 3UTR CAA 72 bp | GGATTGAAAGCATATGCCACACCTGGCCTTTACTCTTaGTGTGTTTCTGCGTGTCAGTGTGAACGAATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GLKAYATPGLYS*CVSACQCERMP Trigger: TGGCATTCGTTCACACTGACACGCAGAAACACACAAAGAGTAAAGGCCAGGTGTGGCATATGCTTTCAATCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
||
| CDS-3UTR TCA 90 bp | TCGCAATGGAGTCGATCACAGATTATCTATGCTGCAGGTCAATTGGAAAGGTCACTGGAACAAATGCAGTaGGGTATTCAAACCACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SQWSRSQIIYAAGQLERSLEQMQ*GIQTTA Trigger: GGCAGTGGTTTGAATACCTCACTGCATTTGTTCCAG...TGACCTTTCCAATTGACCTGCAGCATAGATAATCTGTGATCGACTCCATTGCGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
||
| 3UTR CAA 72 bp | GTGACTGAAAGGACTTCAGGAGACCGTGCTATCAAATaGTCAAGACCTTGTGCAACCAAGCTGAAAGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: VTERTSGDRAIK*SRPCATKLKGK Trigger: TTTGCCTTTCAGCTTGGTTGCACAAGGTCTTGACAATTTGATAGCACGGTCTCCTGAAGTCCTTTCAGTCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
||
| CDS-3UTR TCA 90 bp | GTATTTGGGTATAAGAAGCAACATCCTCCCATATATCTGAAATCATTTCTAGGCTCCTCTAAGCGTTCCTaGCTAGACAGGGTCTGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: VFGYKKQHPPIYLKSFLGSSKRS*LDRVWC Trigger: GCACCAGACCCTGTCTAGTCAGGAACGCTTAGAGGA...GCCTAGAAATGATTTCAGATATATGGGAGGATGTTGCTTCTTATACCCAAATAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
||
| CDS-3UTR TCA 90 bp | TCCTTACATGCAAGCATGAGACAGACAATGGGTATGCAGACTTTATGCCCAAGTTGGGACTGCCCAAATTaGACTCCACTAAATCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SLHASMRQTMGMQTLCPSWDCPN*TPLNLE Trigger: TTCCAGATTTAGTGGAGTTCAATTTGGGCAGTCCCA...ACTTGGGCATAAAGTCTGCATACCCATTGTCTGTCTCATGCTTGCATGTAAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
||
| CDS-3UTR TCA 90 bp | GTATTTGGGTATAAGAAGCAACATCCTCCCATATATCTGAAATCATTTCTAGGCGTAGACTCCGACCCCTaGAAACATCCTCCGAAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: VFGYKKQHPPIYLKSFLGVDSDP*KHPPKD Trigger: GTCCTTCGGAGGATGTTTTCAGGGGTCGGAGTCTAC...GCCTAGAAATGATTTCAGATATATGGGAGGATGTTGCTTCTTATACCCAAATAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
||
| 3UTR CAA 72 bp | GACTTCAGGAGACCGTGCTATCAAATTGTCAAGACCTaGTGCAACCAAGCTGAAAGGCAAATACTGAAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: DFRRPCYQIVKT*CNQAERQILKK Trigger: CTTTTTCAGTATTTGCCTTTCAGCTTGGTTGCACAAGGTCTTGACAATTTGATAGCACGGTCTCCTGAAGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
||
| CDS-3UTR TCA 90 bp | GTTCTTAACCACTCATTAGCATCTTTGGTTACAAGGGCAGCAATACCGTGTGCAAAAATTCCTGAGCCTTaGGATACTTCTAAGTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: VLNHSLASLVTRAAIPCAKIPEP*DTSKSS Trigger: TGATGACTTAGAAGTATCTCAAGGCTCAGGAATTTT...TGCACACGGTATTGCTGCCCTTGTAACCAAAGATGCTAATGAGTGGTTAAGAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
||
| CDS-3UTR GCA 90 bp | GGCACAGTATTTGGGTATAAGAAGCAACATCCTCCCATATATCTGAAATCATTTCACCCTGAAGAAGGTTaGAGAGTTCAAGATGACGAA | + |
|
Preference number: 4 (lower is better) Translates to: GTVFGYKKQHPPIYLKSFHPEEG*RVQDDE Trigger: TTCGTCATCTTGAACTCTGCAACCTTCTTCAGGGTG...AAATGATTTCAGATATATGGGAGGATGTTGCTTCTTATACCCAAATACTGTGCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
||
| CDS-3UTR GCA 90 bp | GGCACAGTATTTGGGTATAAGAAGCAACATCCTCCCATATATCTGAAATCATTTCAGGAAGACACACATTaGACTTCATTGTTTCAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: GTVFGYKKQHPPIYLKSFQEDTH*TSLFQK Trigger: TTTCTGAAACAATGAAGTGCAATGTGTGTCTTCCTG...AAATGATTTCAGATATATGGGAGGATGTTGCTTCTTATACCCAAATACTGTGCC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| CDS GCA 90 bp | GATGACAACCACTGTCTTAGGACTTCGGTCCAGGAGTTGGACCACTaGCCGCCTGATGTTCCTGAGCCTCCGGATGTAGACTTCCAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: DDNHCLRTSVQELDH*PPDVPEPPDVDFQG Trigger: CCCTTGGAAGTCTACATCCGGAGGCTCAGGAACATCAGGCGGGCAGTGGTCCAACTCCTGGACCGAAGTCCTAAGACAGTGGTTGTCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| CDS CCA 90 bp | CAAGATGACGAAGTAGCTGGAGGAAGGGTCCGTGCTCCTCACAAATaGGACCAGATCCACGTCAGGCACCTTCCACTTGGAGGCAGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: QDDEVAGGRVRAPHK*DQIHVRHLPLGGSK Trigger: CTTGCTGCCTCCAAGTGGAAGGTGCCTGACGTGGATCTGGTCCCATTTGTGAGGAGCACGGACCCTTCCTCCAGCTACTTCGTCATCTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| CDS TCA 90 bp | AGCCTGCGAGGAAACATACTGTCCGCTGCTGTCGATGAACGTCTCTaGCAGCGTCTCATGGTCCAAGTACTCCACTTGGGTGACATTGAC | + |
|
Preference number: 5 (lower is better) Translates to: SLRGNILSAAVDERL*QRLMVQVLHLGDID Trigger: GTCAATGTCACCCAAGTGGAGTACTTGGACCATGAGACGCTGTCAGAGACGTTCATCGACAGCAGCGGACAGTATGTTTCCTCGCAGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| CDS CCA 90 bp | ACATACTGTCCGCTGCTGTCGATGAACGTCTCTGACAGCGTCTCATaGTCCAAGTACTCCACTTGGGTGACATTGACGACCAACACCACC | + |
|
Preference number: 5 (lower is better) Translates to: TYCPLLSMNVSDSVS*SKYSTWVTLTTNTT Trigger: GGTGGTGTTGGTCGTCAATGTCACCCAAGTGGAGTACTTGGACCATGAGACGCTGTCAGAGACGTTCATCGACAGCAGCGGACAGTATGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| CDS CCA 90 bp | TCCGCCCTTGAAGTGGTTGATTCTGCTGCTGCAGGGGAGTTTCTTTaGTTTGAAGCAGAACCAGGGCTCTCCGGTGGACAGATCCGTAAA | + |
|
Preference number: 5 (lower is better) Translates to: SALEVVDSAAAGEFL*FEAEPGLSGGQIRK Trigger: TTTACGGATCTGTCCACCGGAGAGCCCTGGTTCTGCTTCAAACCAAAGAAACTCCCCTGCAGCAGCAGAATCAACCACTTCAAGGGCGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| CDS-3UTR CAA 90 bp | TACTCTTTGTGTGTTTCTGCGTGTCAGTGTGAACGAATGCCACAAGGATGCAGGCCGCCCTTGAAGTGGTaGATTCTGCTGCTGCAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: YSLCVSACQCERMPQGCRPPLKW*ILLLQG Trigger: CCCCTGCAGCAGCAGAATCAACCACTTCAAGGGCGG...CCTGCATCCTTGTGGCATTCGTTCACACTGACACGCAGAAACACACAAAGAGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| CDS-3UTR CAA 90 bp | CATGACAGCCAAAAAGCAAAGGGGAAACAGCTGGAACTGCTGAGGGCAGAAACCTTAAAGTGGCGCATCTaGAACCTCCTGGGCCTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: HDSQKAKGKQLELLRAETLKWRI*NLLGLH Trigger: GTGGAGGCCCAGGAGGTTCAAGATGCGCCACTTTAA...GGTTTCTGCCCTCAGCAGTTCCAGCTGTTTCCCCTTTGCTTTTTGGCTGTCATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
||
| CDS TCA 90 bp | AGCCAAGGTCATCTCCCAGGCATCAACAAGGTAGACTCCGACCCCTaGAAACATCCTCCGAAGGACAGTGTCCAGCTGAAAGTTGTACCA | + |
|
Preference number: 5 (lower is better) Translates to: SQGHLPGINKVDSDP*KHPPKDSVQLKVVP Trigger: TGGTACAACTTTCAGCTGGACACTGTCCTTCGGAGGATGTTTTCAGGGGTCGGAGTCTACCTTGTTGATGCCTGGGAGATGACCTTGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| CDS CCA 90 bp | TCGCCTGGAAATCACAGTCACCCAGTCAGGCCCGCTGGAGTTGATTaGCATCTTGATATTCACACCACTCTGAAAGAGAGCACTTTCGGC | + |
|
Preference number: 5 (lower is better) Translates to: SPGNHSHPVRPAGVD*HLDIHTTLKESTFG Trigger: GCCGAAAGTGCTCTCTTTCAGAGTGGTGTGAATATCAAGATGCCAATCAACTCCAGCGGGCCTGACTGGGTGACTGTGATTTCCAGGCGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| CDS-3UTR CAA 90 bp | GGGATTGAAAGCATATGCCACACCTGGCCTTTACTCTTTGTGTGTTTCTGCGTGTCAGGCACCTTCCACTaGGAGGCAGCAAGCAAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: GIESICHTWPLLFVCFCVSGTFH*EAASKA Trigger: TGCCTTGCTTGCTGCCTCCAAGTGGAAGGTGCCTGA...CACGCAGAAACACACAAAGAGTAAAGGCCAGGTGTGGCATATGCTTTCAATCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| CDS-3UTR CAA 90 bp | TCCTTACATGCAAGCATGAGACAGACAATGGGTATGCAGACTTTATGCCCAAGTCTCAGGCCCCAGCTCTaGGGCATTGCCTGTCCGGAT | + |
|
Preference number: 5 (lower is better) Translates to: SLHASMRQTMGMQTLCPSLRPQL*GIACPD Trigger: ATCCGGACAGGCAATGCCCAAGAGCTGGGGCCTGAG...ACTTGGGCATAAAGTCTGCATACCCATTGTCTGTCTCATGCTTGCATGTAAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
||
| CDS TCA 90 bp | TCAGGCCCGCTGGAGTTGATTGGCATCTTGATATTCACACCACTCTaGAAGAGAGCACTTTCGGCAGCTGTGAGAAGGCCCTTCGTGTAT | + |
|
Preference number: 5 (lower is better) Translates to: SGPLELIGILIFTPL*KRALSAAVRRPFVY Trigger: ATACACGAAGGGCCTTCTCACAGCTGCCGAAAGTGCTCTCTTTCAGAGTGGTGTGAATATCAAGATGCCAATCAACTCCAGCGGGCCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
||
| CDS GCA 90 bp | ACCATGACAGCGATAGCTGAGCAAGACGTTGTGTTTCTGGTCCACTaGAAGGAAGGGACCGACATTCTTGGGACTGCCCAAATTGAACTC | + |
|
Preference number: 5 (lower is better) Translates to: TMTAIAEQDVVFLVH*KEGTDILGTAQIEL Trigger: GAGTTCAATTTGGGCAGTCCCAAGAATGTCGGTCCCTTCCTTGCAGTGGACCAGAAACACAACGTCTTGCTCAGCTATCGCTGTCATGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| CDS GCA 90 bp | GGCCACCACTGTGTTCTTCCCTCCCACGAGCCTGTTCAGTTCATTTaGCACGTAATGGAGCTCATTACTAAAGACGCTCGTGAAGCGAAT | + |
|
Preference number: 5 (lower is better) Translates to: GHHCVLPSHEPVQFI*HVMELITKDAREAN Trigger: ATTCGCTTCACGAGCGTCTTTAGTAATGAGCTCCATTACGTGGCAAATGAACTGAACAGGCTCGTGGGAGGGAAGAACACAGTGGTGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| CDS-3UTR CAA 90 bp | TCCTTACATGCAAGCATGAGACAGACAATGGGTATGCAGACTTTATGCCCAAGTCCCAGCTCTTGGGCATaGCCTGTCCGGATGACAACC | + |
|
Preference number: 5 (lower is better) Translates to: SLHASMRQTMGMQTLCPSPSSWA*PVRMTT Trigger: GGTTGTCATCCGGACAGGCAATGCCCAAGAGCTGGG...ACTTGGGCATAAAGTCTGCATACCCATTGTCTGTCTCATGCTTGCATGTAAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
||
| CDS CCA 90 bp | AGAAATCCTTCCCGATCGGAAGAGACTCTTGAAATAGACCCTGTCTaGTTTCTCTTCCTGCAGGCGCTGAAGGACTCTGATCCCTTCACT | + |
|
Preference number: 5 (lower is better) Translates to: RNPSRSEETLEIDPV*FLFLQALKDSDPFT Trigger: AGTGAAGGGATCAGAGTCCTTCAGCGCCTGCAGGAAGAGAAACCAGACAGGGTCTATTTCAAGAGTCTCTTCCGATCGGGAAGGATTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| CDS CCA 90 bp | CACGTAATGGAGCTCATTACTAAAGACGCTCGTGAAGCGAATGGGTaGACCATGACAGCGATAGCTGAGCAAGACGTTGTGTTTCTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: HVMELITKDAREANG*TMTAIAEQDVVFLV Trigger: GACCAGAAACACAACGTCTTGCTCAGCTATCGCTGTCATGGTCCACCCATTCGCTTCACGAGCGTCTTTAGTAATGAGCTCCATTACGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| CDS TCA 90 bp | TGCACTTCATTGTTTCAGAAATCCTTCCCGATCGGAAGAGACTCTTaGAATAGACCCTGTCTGGTTTCTCTTCCTGCAGGCGCTGAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: CTSLFQKSFPIGRDS*NRPCLVSLPAGAEG Trigger: TCCTTCAGCGCCTGCAGGAAGAGAAACCAGACAGGGTCTATTTCAAGAGTCTCTTCCGATCGGGAAGGATTTCTGAAACAATGAAGTGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| CDS-3UTR CAA 90 bp | AGCTACAAACGCAGCCTACACTGCCTACGTTCATTACCAGTCATTATGCAAAGGTCAGGCCCGCTGGAGTaGATTGGCATCTTGATATTC | + |
|
Preference number: 5 (lower is better) Translates to: SYKRSLHCLRSLPVIMQRSGPLE*IGILIF Trigger: GAATATCAAGATGCCAATCAACTCCAGCGGGCCTGA...CCTTTGCATAATGACTGGTAATGAACGTAGGCAGTGTAGGCTGCGTTTGTAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| CDS GCA 90 bp | CACTGCCTGATTGTCGAGTCACCGAACAAATACACCATTTTTCCTTaGAAGCATTCCGTAATGTTGTCGGGGTCATTAAAGTGGCGCATC | + |
|
Preference number: 5 (lower is better) Translates to: HCLIVESPNKYTIFP*KHSVMLSGSLKWRI Trigger: GATGCGCCACTTTAATGACCCCGACAACATTACGGAATGCTTGCAAGGAAAAATGGTGTATTTGTTCGGTGACTCGACAATCAGGCAGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| CDS-3UTR CAA 90 bp | TCGCAATGGAGTCGATCACAGATTATCTATGCTGCAGGTCAATTGGAAAGGTCAGGGAGTTTCTTTGGTTaGAAGCAGAACCAGGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SQWSRSQIIYAAGQLERSGSFFG*KQNQGS Trigger: AGAGCCCTGGTTCTGCTTCAAACCAAAGAAACTCCC...TGACCTTTCCAATTGACCTGCAGCATAGATAATCTGTGATCGACTCCATTGCGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| CDS-3UTR CAA 90 bp | GGGATTGAAAGCATATGCCACACCTGGCCTTTACTCTTTGTGTGTTTCTGCGTGTTGGGACTGCCCAAATaGAACTCCACTAAATCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: GIESICHTWPLLFVCFCVLGLPK*NSTKSG Trigger: TCCAGATTTAGTGGAGTTCAATTTGGGCAGTCCCAA...CACGCAGAAACACACAAAGAGTAAAGGCCAGGTGTGGCATATGCTTTCAATCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| CDS-3UTR CAA 90 bp | GTTCTTAACCACTCATTAGCATCTTTGGTTACAAGGGCAGCAATACCGTGTGCAAAGCATTCCGTAATGTaGTCGGGGTCATTAAAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: VLNHSLASLVTRAAIPCAKHSVM*SGSLKW Trigger: CCACTTTAATGACCCCGACAACATTACGGAATGCTT...TGCACACGGTATTGCTGCCCTTGTAACCAAAGATGCTAATGAGTGGTTAAGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| CDS-3UTR CAA 90 bp | GTTCTTAACCACTCATTAGCATCTTTGGTTACAAGGGCAGCAATACCGTGTGCAACACATTGCACTTCATaGTTTCAGAAATCCTTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: VLNHSLASLVTRAAIPCATHCTS*FQKSFP Trigger: CGGGAAGGATTTCTGAAACAATGAAGTGCAATGTGT...TGCACACGGTATTGCTGCCCTTGTAACCAAAGATGCTAATGAGTGGTTAAGAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| CDS-3UTR CAA 90 bp | GATACAACAGTCTTCATTGTGGCCACAGGAACCTCTAGCAAGAATCCCTCTCTAATACACCATTTTTCCTaGCAAGCATTCCGTAATGTT | + |
|
Preference number: 5 (lower is better) Translates to: DTTVFIVATGTSSKNPSLIHHFS*QAFRNV Trigger: AACATTACGGAATGCTTGCAAGGAAAAATGGTGTAT...TAGAGAGGGATTCTTGCTAGAGGTTCCTGTGGCCACAATGAAGACTGTTGTATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| CDS-3UTR CAA 90 bp | GTATTTGGGTATAAGAAGCAACATCCTCCCATATATCTGAAATCATTTCTAGGCGCCTGTTCAGTTCATTaGCCACGTAATGGAGCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: VFGYKKQHPPIYLKSFLGACSVH*PRNGAH Trigger: ATGAGCTCCATTACGTGGCAAATGAACTGAACAGGC...GCCTAGAAATGATTTCAGATATATGGGAGGATGTTGCTTCTTATACCCAAATAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| CDS GCA 72 bp | CACTGTCTTAGGACTTCGGTCCAGGAGTTGGACCACTaGCCGCCTGATGTTCCTGAGCCTCCGGATGTAGAC | + |
|
Preference number: 6 (lower is better) Translates to: HCLRTSVQELDH*PPDVPEPPDVD Trigger: GTCTACATCCGGAGGCTCAGGAACATCAGGCGGGCAGTGGTCCAACTCCTGGACCGAAGTCCTAAGACAGTG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| CDS CCA 72 bp | GAAGTAGCTGGAGGAAGGGTCCGTGCTCCTCACAAATaGGACCAGATCCACGTCAGGCACCTTCCACTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: EVAGGRVRAPHK*DQIHVRHLPLG Trigger: TCCAAGTGGAAGGTGCCTGACGTGGATCTGGTCCCATTTGTGAGGAGCACGGACCCTTCCTCCAGCTACTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| CDS CAA 72 bp | TCGGCAGCTGTGAGAAGGCCCTTCGTGTATCCGCCCTaGAAGTGGTTGATTCTGCTGCTGCAGGGGAGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: SAAVRRPFVYPP*KWLILLLQGSF Trigger: GAAACTCCCCTGCAGCAGCAGAATCAACCACTTCAAGGGCGGATACACGAAGGGCCTTCTCACAGCTGCCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| CDS CCA 72 bp | CCGCTGCTGTCGATGAACGTCTCTGACAGCGTCTCATaGTCCAAGTACTCCACTTGGGTGACATTGACGACC | + |
|
Preference number: 6 (lower is better) Translates to: PLLSMNVSDSVS*SKYSTWVTLTT Trigger: GGTCGTCAATGTCACCCAAGTGGAGTACTTGGACCATGAGACGCTGTCAGAGACGTTCATCGACAGCAGCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| CDS CAA 72 bp | ACAAATGGGACCAGATCCACGTCAGGCACCTTCCACTaGGAGGCAGCAAGCAAGGCATCCTCCTCTAAGCGT | + |
|
Preference number: 6 (lower is better) Translates to: TNGTRSTSGTFH*EAASKASSSKR Trigger: ACGCTTAGAGGAGGATGCCTTGCTTGCTGCCTCCAAGTGGAAGGTGCCTGACGTGGATCTGGTCCCATTTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| CDS CAA 72 bp | GTCACTGTTGTAAAGGCTCACCTCAGGCCCCAGCTCTaGGGCATTGCCTGTCCGGATGACAACCACTGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: VTVVKAHLRPQL*GIACPDDNHCL Trigger: AAGACAGTGGTTGTCATCCGGACAGGCAATGCCCAAGAGCTGGGGCCTGAGGTGAGCCTTTACAACAGTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| CDS CAA 90 bp | GTTGTACCAGTCACTGTTGTAAAGGCTCACCTCAGGCCCCAGCTCTaGGGCATTGCCTGTCCGGATGACAACCACTGTCTTAGGACTTCG | + |
|
Preference number: 6 (lower is better) Translates to: VVPVTVVKAHLRPQL*GIACPDDNHCLRTS Trigger: CGAAGTCCTAAGACAGTGGTTGTCATCCGGACAGGCAATGCCCAAGAGCTGGGGCCTGAGGTGAGCCTTTACAACAGTGACTGGTACAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| CDS TCA 72 bp | TGTCTGGTTTCTCTTCCTGCAGGCGCTGAAGGACTCTaGTCCCTTCACTGGGGTGAACCAGAGATACGGACA | + |
|
Preference number: 6 (lower is better) Translates to: CLVSLPAGAEGL*SLHWGEPEIRT Trigger: TGTCCGTATCTCTGGTTCACCCCAGTGAAGGGATCAGAGTCCTTCAGCGCCTGCAGGAAGAGAAACCAGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| CDS GCA 72 bp | GCGATAGCTGAGCAAGACGTTGTGTTTCTGGTCCACTaGAAGGAAGGGACCGACATTCTTGGGACTGCCCAA | + |
|
Preference number: 6 (lower is better) Translates to: AIAEQDVVFLVH*KEGTDILGTAQ Trigger: TTGGGCAGTCCCAAGAATGTCGGTCCCTTCCTTGCAGTGGACCAGAAACACAACGTCTTGCTCAGCTATCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| CDS CCA 72 bp | GTCTCTGACAGCGTCTCATGGTCCAAGTACTCCACTTaGGTGACATTGACGACCAACACCACCACCATCAGC | + |
|
Preference number: 6 (lower is better) Translates to: VSDSVSWSKYST*VTLTTNTTTIS Trigger: GCTGATGGTGGTGGTGTTGGTCGTCAATGTCACCCAAGTGGAGTACTTGGACCATGAGACGCTGTCAGAGAC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| CDS CCA 72 bp | GAAGTGGTTGATTCTGCTGCTGCAGGGGAGTTTCTTTaGTTTGAAGCAGAACCAGGGCTCTCCGGTGGACAG | + |
|
Preference number: 6 (lower is better) Translates to: EVVDSAAAGEFL*FEAEPGLSGGQ Trigger: CTGTCCACCGGAGAGCCCTGGTTCTGCTTCAAACCAAAGAAACTCCCCTGCAGCAGCAGAATCAACCACTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| CDS CAA 90 bp | TCGGCAGCTGTGAGAAGGCCCTTCGTGTATCCGCCCTTGAAGTGGTaGATTCTGCTGCTGCAGGGGAGTTTCTTTGGTTTGAAGCAGAAC | + |
|
Preference number: 6 (lower is better) Translates to: SAAVRRPFVYPPLKW*ILLLQGSFFGLKQN Trigger: GTTCTGCTTCAAACCAAAGAAACTCCCCTGCAGCAGCAGAATCAACCACTTCAAGGGCGGATACACGAAGGGCCTTCTCACAGCTGCCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| CDS CAA 90 bp | AGAGCACTTTCGGCAGCTGTGAGAAGGCCCTTCGTGTATCCGCCCTaGAAGTGGTTGATTCTGCTGCTGCAGGGGAGTTTCTTTGGTTTG | + |
|
Preference number: 6 (lower is better) Translates to: RALSAAVRRPFVYPP*KWLILLLQGSFFGL Trigger: CAAACCAAAGAAACTCCCCTGCAGCAGCAGAATCAACCACTTCAAGGGCGGATACACGAAGGGCCTTCTCACAGCTGCCGAAAGTGCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| CDS TCA 72 bp | GGAAACATACTGTCCGCTGCTGTCGATGAACGTCTCTaGCAGCGTCTCATGGTCCAAGTACTCCACTTGGGT | + |
|
Preference number: 6 (lower is better) Translates to: GNILSAAVDERL*QRLMVQVLHLG Trigger: ACCCAAGTGGAGTACTTGGACCATGAGACGCTGTCAGAGACGTTCATCGACAGCAGCGGACAGTATGTTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
||
| CDS TCA 72 bp | CATCTCCCAGGCATCAACAAGGTAGACTCCGACCCCTaGAAACATCCTCCGAAGGACAGTGTCCAGCTGAAA | + |
|
Preference number: 6 (lower is better) Translates to: HLPGINKVDSDP*KHPPKDSVQLK Trigger: TTTCAGCTGGACACTGTCCTTCGGAGGATGTTTTCAGGGGTCGGAGTCTACCTTGTTGATGCCTGGGAGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
||
| CDS CAA 72 bp | GTGAGAAGGCCCTTCGTGTATCCGCCCTTGAAGTGGTaGATTCTGCTGCTGCAGGGGAGTTTCTTTGGTTTG | + |
|
Preference number: 6 (lower is better) Translates to: VRRPFVYPPLKW*ILLLQGSFFGL Trigger: CAAACCAAAGAAACTCCCCTGCAGCAGCAGAATCAACCACTTCAAGGGCGGATACACGAAGGGCCTTCTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
||
| CDS CCA 72 bp | GTATTCTGGCCTGCAGGTAATCTCCGCCATACTTCTTaGGCTTCCCTCGAAAATCCTGCACATGAACCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: VFWPAGNLRHTS*ASLENPAHEPA Trigger: TGCTGGTTCATGTGCAGGATTTTCGAGGGAAGCCCAAGAAGTATGGCGGAGATTACCTGCAGGCCAGAATAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
||
| CDS CCA 72 bp | TCCCGATCGGAAGAGACTCTTGAAATAGACCCTGTCTaGTTTCTCTTCCTGCAGGCGCTGAAGGACTCTGAT | + |
|
Preference number: 6 (lower is better) Translates to: SRSEETLEIDPV*FLFLQALKDSD Trigger: ATCAGAGTCCTTCAGCGCCTGCAGGAAGAGAAACCAGACAGGGTCTATTTCAAGAGTCTCTTCCGATCGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
||
| CDS CCA 72 bp | TGCAAGCATTCCGTAATGTTGTCGGGGTCATTAAAGTaGCGCATCTTGAACCTCCTGGGCCTCCACTGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: CKHSVMLSGSLK*RILNLLGLHWF Trigger: AAACCAGTGGAGGCCCAGGAGGTTCAAGATGCGCCACTTTAATGACCCCGACAACATTACGGAATGCTTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
||
| CDS CCA 72 bp | AATCACAGTCACCCAGTCAGGCCCGCTGGAGTTGATTaGCATCTTGATATTCACACCACTCTGAAAGAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: NHSHPVRPAGVD*HLDIHTTLKES Trigger: GCTCTCTTTCAGAGTGGTGTGAATATCAAGATGCCAATCAACTCCAGCGGGCCTGACTGGGTGACTGTGATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
||
| CDS CCA 72 bp | GAGATACTTCTAAGTCATCAGTTTCTTTCGTTCGCCTaGAAATCACAGTCACCCAGTCAGGCCCGCTGGAGT | + |
|
Preference number: 6 (lower is better) Translates to: EILLSHQFLSFA*KSQSPSQARWS Trigger: ACTCCAGCGGGCCTGACTGGGTGACTGTGATTTCCAGGCGAACGAAAGAAACTGATGACTTAGAAGTATCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
||
| CDS GCA 72 bp | TGTGTTCTTCCCTCCCACGAGCCTGTTCAGTTCATTTaGCACGTAATGGAGCTCATTACTAAAGACGCTCGT | + |
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Preference number: 6 (lower is better) Translates to: CVLPSHEPVQFI*HVMELITKDAR Trigger: ACGAGCGTCTTTAGTAATGAGCTCCATTACGTGGCAAATGAACTGAACAGGCTCGTGGGAGGGAAGAACACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| CDS CAA 72 bp | GCAAGGAAGGGACCGACATTCTTGGGACTGCCCAAATaGAACTCCACTAAATCTGGAACAAATGCAGTGAGG | + |
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Preference number: 6 (lower is better) Translates to: ARKGPTFLGLPK*NSTKSGTNAVR Trigger: CCTCACTGCATTTGTTCCAGATTTAGTGGAGTTCAATTTGGGCAGTCCCAAGAATGTCGGTCCCTTCCTTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| CDS CAA 72 bp | TGTTTCTGGTCCACTGCAAGGAAGGGACCGACATTCTaGGGACTGCCCAAATTGAACTCCACTAAATCTGGA | + |
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Preference number: 6 (lower is better) Translates to: CFWSTARKGPTF*GLPKLNSTKSG Trigger: TCCAGATTTAGTGGAGTTCAATTTGGGCAGTCCCAAGAATGTCGGTCCCTTCCTTGCAGTGGACCAGAAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| CDS CAA 90 bp | TCACCGAACAAATACACCATTTTTCCTTGCAAGCATTCCGTAATGTaGTCGGGGTCATTAAAGTGGCGCATCTTGAACCTCCTGGGCCTC | + |
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Preference number: 6 (lower is better) Translates to: SPNKYTIFPCKHSVM*SGSLKWRILNLLGL Trigger: GAGGCCCAGGAGGTTCAAGATGCGCCACTTTAATGACCCCGACAACATTACGGAATGCTTGCAAGGAAAAATGGTGTATTTGTTCGGTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| CDS CAA 90 bp | CCACTGCCTGATTGTCGAGTCACCGAACAAATACACCATTTTTCCTaGCAAGCATTCCGTAATGTTGTCGGGGTCATTAAAGTGGCGCAT | + |
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Preference number: 6 (lower is better) Translates to: PLPDCRVTEQIHHFS*QAFRNVVGVIKVAH Trigger: ATGCGCCACTTTAATGACCCCGACAACATTACGGAATGCTTGCAAGGAAAAATGGTGTATTTGTTCGGTGACTCGACAATCAGGCAGTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| CDS CAA 90 bp | AAGACGTTGTGTTTCTGGTCCACTGCAAGGAAGGGACCGACATTCTaGGGACTGCCCAAATTGAACTCCACTAAATCTGGAACAAATGCA | + |
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Preference number: 6 (lower is better) Translates to: KTLCFWSTARKGPTF*GLPKLNSTKSGTNA Trigger: TGCATTTGTTCCAGATTTAGTGGAGTTCAATTTGGGCAGTCCCAAGAATGTCGGTCCCTTCCTTGCAGTGGACCAGAAACACAACGTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| CDS CAA 72 bp | AAGTTGCACAAGGGAAGACTTCCAGGAAGACACACATaGCACTTCATTGTTTCAGAAATCCTTCCCGATCGG | + |
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Preference number: 6 (lower is better) Translates to: KLHKGRLPGRHT*HFIVSEILPDR Trigger: CCGATCGGGAAGGATTTCTGAAACAATGAAGTGCAATGTGTGTCTTCCTGGAAGTCTTCCCTTGTGCAACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| CDS CAA 72 bp | AAATACACCATTTTTCCTTGCAAGCATTCCGTAATGTaGTCGGGGTCATTAAAGTGGCGCATCTTGAACCTC | + |
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Preference number: 6 (lower is better) Translates to: KYTIFPCKHSVM*SGSLKWRILNL Trigger: GAGGTTCAAGATGCGCCACTTTAATGACCCCGACAACATTACGGAATGCTTGCAAGGAAAAATGGTGTATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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| CDS CAA 72 bp | GATTGTCGAGTCACCGAACAAATACACCATTTTTCCTaGCAAGCATTCCGTAATGTTGTCGGGGTCATTAAA | + |
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Preference number: 6 (lower is better) Translates to: DCRVTEQIHHFS*QAFRNVVGVIK Trigger: TTTAATGACCCCGACAACATTACGGAATGCTTGCAAGGAAAAATGGTGTATTTGTTCGGTGACTCGACAATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099705.5 |
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