Pregenerated sensors for NXNL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034829Ensembl transcript IDs: ENSMUST00000048243.7, ENSMUST00000163659.3
Found 155 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCTGCACAGAGTCAGCTTGCTGGCCCTCTCTTGCAACCAGAGCGCTaGATGACATGGGTGCATCACAGAGTGCGCCTGGCAGGAGTGCTT | + |
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Preference number: 1 (lower is better) Translates to: SAQSQLAGPLLQPER*MTWVHHRVRLAGVL Trigger: AAGCACTCCTGCCAGGCGCACTCTGTGATGCACCCATGTCATTCAGCGCTCTGGTTGCAAGAGAGGGCCAGCAAGCTGACTCTGTGCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163659.3 |
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| 3UTR CCA 90 bp | CTGTTTCCCCCACTACTCCCTTGGGAGCGGAGGCAGATGAGAGGTTaGCAGGGTCCGATTCCCCTGGTTCACAGCTTTCTTACTCCCTCT | + |
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Preference number: 1 (lower is better) Translates to: LFPPLLPWERRQMRG*QGPIPLVHSFLTPS Trigger: AGAGGGAGTAAGAAAGCTGTGAACCAGGGGAATCGGACCCTGCCAACCTCTCATCTGCCTCCGCTCCCAAGGGAGTAGTGGGGGAAACAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
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| 3UTR CCA 90 bp | AAGAGAGTCCCTCCTATCAATCATGCTCCACTGTCCTCAAGGCCCTaGCAGCTCCATTTGTGGCTGTCCCTGTTGGGGACACTTCCTGCC | + |
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Preference number: 1 (lower is better) Translates to: KRVPPINHAPLSSRP*QLHLWLSLLGTLPA Trigger: GGCAGGAAGTGTCCCCAACAGGGACAGCCACAAATGGAGCTGCCAGGGCCTTGAGGACAGTGGAGCATGATTGATAGGAGGGACTCTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
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| 3UTR GCA 90 bp | GCCCTGGCAGCTCCATTTGTGGCTGTCCCTGTTGGGGACACTTCCTaGCAAGTGAAGTGTTTTGTGTCTGGCTGCTGCCACTCAATCTCT | + |
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Preference number: 1 (lower is better) Translates to: ALAAPFVAVPVGDTS*QVKCFVSGCCHSIS Trigger: AGAGATTGAGTGGCAGCAGCCAGACACAAAACACTTCACTTGGCAGGAAGTGTCCCCAACAGGGACAGCCACAAATGGAGCTGCCAGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
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| 3UTR TCA 90 bp | CAGCTCCATTTGTGGCTGTCCCTGTTGGGGACACTTCCTGCCAAGTaGAGTGTTTTGTGTCTGGCTGCTGCCACTCAATCTCTGGTATGG | + |
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Preference number: 1 (lower is better) Translates to: QLHLWLSLLGTLPAK*SVLCLAAATQSLVW Trigger: CCATACCAGAGATTGAGTGGCAGCAGCCAGACACAAAACACTTCACTTGGCAGGAAGTGTCCCCAACAGGGACAGCCACAAATGGAGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
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| 3UTR CCA 90 bp | TGTCCCTGTTGGGGACACTTCCTGCCAAGTGAAGTGTTTTGTGTCTaGCTGCTGCCACTCAATCTCTGGTATGGTAGCCTGTGTCAGTGC | + |
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Preference number: 1 (lower is better) Translates to: CPCWGHFLPSEVFCV*LLPLNLWYGSLCQC Trigger: GCACTGACACAGGCTACCATACCAGAGATTGAGTGGCAGCAGCCAGACACAAAACACTTCACTTGGCAGGAAGTGTCCCCAACAGGGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
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| 3UTR TCA 90 bp | AAACCTCTTGTCTCTTTTTGGCTGGCATTCCAGCTACTCTTCCACTaGGGCATGAGAATGGTGAGTTCAAGGCCACCCTGGGCTGCTGTT | + |
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Preference number: 1 (lower is better) Translates to: KPLVSFWLAFQLLFH*GMRMVSSRPPWAAV Trigger: AACAGCAGCCCAGGGTGGCCTTGAACTCACCATTCTCATGCCTCAGTGGAAGAGTAGCTGGAATGCCAGCCAAAAAGAGACAAGAGGTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
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| 3UTR TCA 90 bp | CTCTGGTATGGTAGCCTGTGTCAGTGCTTCATTCCTGTTCGTGGCTaGGCAATAGTCCACTCTGGACATCCCACAGGTGTTGATCCATTG | + |
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Preference number: 1 (lower is better) Translates to: LWYGSLCQCFIPVRG*AIVHSGHPTGVDPL Trigger: CAATGGATCAACACCTGTGGGATGTCCAGAGTGGACTATTGCTCAGCCACGAACAGGAATGAAGCACTGACACAGGCTACCATACCAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
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| 3UTR TCA 90 bp | CAGTGGGTTCCAGGAATTGAACTTGGGTTGTCAGTCTTGACAACATaGGCCTATCTGCACAGAGTCAGCTTGCTGGCCCTCTCTTGCAAC | + |
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Preference number: 1 (lower is better) Translates to: QWVPGIELGLSVLTT*AYLHRVSLLALSCN Trigger: GTTGCAAGAGAGGGCCAGCAAGCTGACTCTGTGCAGATAGGCTCATGTTGTCAAGACTGACAACCCAAGTTCAATTCCTGGAACCCACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163659.3 |
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| 3UTR CCA 90 bp | CTAGTCAGATTCTTGATCCCAGAAAGTCAGGTTTGCAAGCTTCCGTaGACTTGCTTGGTGCAGGAGGGTTTTAAACTCACGCACTATCCC | + |
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Preference number: 1 (lower is better) Translates to: LVRFLIPESQVCKLP*TCLVQEGFKLTHYP Trigger: GGGATAGTGCGTGAGTTTAAAACCCTCCTGCACCAAGCAAGTCCACGGAAGCTTGCAAACCTGACTTTCTGGGATCAAGAATCTGACTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
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| 3UTR TCA 90 bp | ACTTGCGGAAGTCAGTCTTTCTTCCACTCAGTGGGTTCCAGGAATTaGACTTGGGTTGTCAGTCTTGACAACATGAGCCTATCTGCACAG | + |
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Preference number: 1 (lower is better) Translates to: TCGSQSFFHSVGSRN*TWVVSLDNMSLSAQ Trigger: CTGTGCAGATAGGCTCATGTTGTCAAGACTGACAACCCAAGTTCAATTCCTGGAACCCACTGAGTGGAAGAAAGACTGACTTCCGCAAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163659.3 |
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| 3UTR GCA 90 bp | CTTCCACTGAGGCATGAGAATGGTGAGTTCAAGGCCACCCTGGGCTaGTGTTTAGGGAACATACTGAACTTAGAAGAGGACAAGGATAAT | + |
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Preference number: 1 (lower is better) Translates to: LPLRHENGEFKATLG*CLGNILNLEEDKDN Trigger: ATTATCCTTGTCCTCTTCTAAGTTCAGTATGTTCCCTAAACAGCAGCCCAGGGTGGCCTTGAACTCACCATTCTCATGCCTCAGTGGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
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| 3UTR CCA 90 bp | TTTAAAGCACATTTACAGAGCAACCCTGCCTATATCTATCTAGTTTaGAAGCATTCTATCTCTTTAAGAGAGTCCCTCCTATCAATCATG | + |
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Preference number: 1 (lower is better) Translates to: FKAHLQSNPAYIYLV*KHSISLRESLLSIM Trigger: CATGATTGATAGGAGGGACTCTCTTAAAGAGATAGAATGCTTCCAAACTAGATAGATATAGGCAGGGTTGCTCTGTAAATGTGCTTTAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
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| 3UTR CAA 90 bp | CCTGTTTCCCCCACTACTCCCTTGGGAGCGGAGGCAGATGAGAGGTaGGCAGGGTCCGATTCCCCTGGTTCACAGCTTTCTTACTCCCTC | + |
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Preference number: 2 (lower is better) Translates to: PVSPTTPLGAEADER*AGSDSPGSQLSYSL Trigger: GAGGGAGTAAGAAAGCTGTGAACCAGGGGAATCGGACCCTGCCAACCTCTCATCTGCCTCCGCTCCCAAGGGAGTAGTGGGGGAAACAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
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| 3UTR-3UTR TCA 90 bp | TGGCTGCTGCCACTCAATCTCTGGTATGGTAGCCTGTGTCAGTGCTTCATTCCTGGGAGCGGAGGCAGATaGGAGGTTGGCAGGGTCCGA | + |
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Preference number: 2 (lower is better) Translates to: WLLPLNLWYGSLCQCFIPGSGGR*EVGRVR Trigger: TCGGACCCTGCCAACCTCTCATCTGCCTCCGCTCCC...AGGAATGAAGCACTGACACAGGCTACCATACCAGAGATTGAGTGGCAGCAGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
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| 3UTR-3UTR GCA 90 bp | TGGGAGCGGAGGCAGATGAGAGGTTGGCAGGGTCCGATTCCCCTGGTTCACAGCAAGCTTCCGTGGACTTaGTTGGTGCAGGAGGGTTTT | + |
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Preference number: 2 (lower is better) Translates to: WERRQMRGWQGPIPLVHSKLPWT*LVQEGF Trigger: AAAACCCTCCTGCACCAAGCAAGTCCACGGAAGCTT...GCTGTGAACCAGGGGAATCGGACCCTGCCAACCTCTCATCTGCCTCCGCTCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
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| 3UTR-3UTR GCA 90 bp | TCCCCCACTACTCCCTTGGGAGCGGAGGCAGATGAGAGGTTGGCAGGGTCCGATTTGAGGGGACATGAGTaGAAGTCAAGGGACAACTTG | + |
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Preference number: 2 (lower is better) Translates to: SPTTPLGAEADERLAGSDLRGHE*KSRDNL Trigger: CAAGTTGTCCCTTGACTTGCACTCATGTCCCCTCAA...ATCGGACCCTGCCAACCTCTCATCTGCCTCCGCTCCCAAGGGAGTAGTGGGGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
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| 3UTR-3UTR CCA 90 bp | TCCCCCACTACTCCCTTGGGAGCGGAGGCAGATGAGAGGTTGGCAGGGTCCGATCCTCTTGTCTCTTTTTaGCTGGCATTCCAGCTACTC | + |
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Preference number: 2 (lower is better) Translates to: SPTTPLGAEADERLAGSDPLVSF*LAFQLL Trigger: GAGTAGCTGGAATGCCAGCCAAAAAGAGACAAGAGG...ATCGGACCCTGCCAACCTCTCATCTGCCTCCGCTCCCAAGGGAGTAGTGGGGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
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| 3UTR-3UTR GCA 90 bp | GTGTCAGTGCTTCATTCCTGTTCGTGGCTGAGCAATAGTCCACTCTGGACATCCTCAGACCTCTGTCCCTaGACCCGGGTACTTTGGGGG | + |
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Preference number: 2 (lower is better) Translates to: VSVLHSCSWLSNSPLWTSSDLCP*TRVLWG Trigger: CCCCCAAAGTACCCGGGTGCAGGGACAGAGGTCTGA...GGATGTCCAGAGTGGACTATTGCTCAGCCACGAACAGGAATGAAGCACTGACAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
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| 3UTR-3UTR TCA 90 bp | TGGGAGCGGAGGCAGATGAGAGGTTGGCAGGGTCCGATTCCCCTGGTTCACAGCTTTGGATGGGAGTTTTaGGTTTGGGGTTCTATGGAT | + |
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Preference number: 2 (lower is better) Translates to: WERRQMRGWQGPIPLVHSFGWEF*VWGSMD Trigger: ATCCATAGAACCCCAAACTCAAAACTCCCATCCAAA...GCTGTGAACCAGGGGAATCGGACCCTGCCAACCTCTCATCTGCCTCCGCTCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000163659.3 |
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| 3UTR-3UTR CCA 90 bp | AGGGTCAGCTACAAAGCCAGGAACACACATAAGCAAGCCTGGGAGCCCAGCCGCCCTCTTGTCTCTTTTTaGCTGGCATTCCAGCTACTC | + |
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Preference number: 2 (lower is better) Translates to: RVSYKARNTHKQAWEPSRPLVSF*LAFQLL Trigger: GAGTAGCTGGAATGCCAGCCAAAAAGAGACAAGAGG...GCGGCTGGGCTCCCAGGCTTGCTTATGTGTGTTCCTGGCTTTGTAGCTGACCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
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| 3UTR-3UTR CCA 90 bp | GAGCGGAGGCAGATGAGAGGTTGGCAGGGTCCGATTCCCCTGGTTCACAGCTTTTTCCGTGGACTTGCTTaGTGCAGGAGGGTTTTAAAC | + |
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Preference number: 2 (lower is better) Translates to: ERRQMRGWQGPIPLVHSFFRGLA*CRRVLN Trigger: GTTTAAAACCCTCCTGCACCAAGCAAGTCCACGGAA...AAAGCTGTGAACCAGGGGAATCGGACCCTGCCAACCTCTCATCTGCCTCCGCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
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| 3UTR-3UTR TCA 90 bp | GGCAGGAGGATCTCTGAGTTCGAGCCTACAGGGCAACACAGAGAAACCCTGTCTCAGCTACTCTTCCACTaGGGCATGAGAATGGTGAGT | + |
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Preference number: 2 (lower is better) Translates to: GRRISEFEPTGQHRETLSQLLFH*GMRMVS Trigger: ACTCACCATTCTCATGCCTCAGTGGAAGAGTAGCTG...AGACAGGGTTTCTCTGTGTTGCCCTGTAGGCTCGAACTCAGAGATCCTCCTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
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| 3UTR-3UTR CCA 90 bp | AGGGTCAGCTACAAAGCCAGGAACACACATAAGCAAGCCTGGGAGCCCAGCCGCTTGTCTCTTTTTGGCTaGCATTCCAGCTACTCTTCC | + |
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Preference number: 2 (lower is better) Translates to: RVSYKARNTHKQAWEPSRLSLFG*HSSYSS Trigger: GGAAGAGTAGCTGGAATGCCAGCCAAAAAGAGACAA...GCGGCTGGGCTCCCAGGCTTGCTTATGTGTGTTCCTGGCTTTGTAGCTGACCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
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| 3UTR-3UTR CCA 90 bp | CACTTCCTGCCAAGTGAAGTGTTTTGTGTCTGGCTGCTGCCACTCAATCTCTGGTGTGGCTGTCCCTGTTaGGGACACTTCCTGCCAAGT | + |
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Preference number: 2 (lower is better) Translates to: HFLPSEVFCVWLLPLNLWCGCPC*GHFLPS Trigger: ACTTGGCAGGAAGTGTCCCCAACAGGGACAGCCACA...CCAGAGATTGAGTGGCAGCAGCCAGACACAAAACACTTCACTTGGCAGGAAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
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| 3UTR-3UTR GCA 90 bp | GGTTCCCCGGGATCGAATACAGGTTGTCAGGCTTATTCAGTCTTGAACCTGTTTGGGTGCATCACAGAGTaGGCCTGGCAGGAGTGCTTT | + |
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Preference number: 2 (lower is better) Translates to: GSPGSNTGCQAYSVLNLFGCITE*AWQECF Trigger: AAAGCACTCCTGCCAGGCGCACTCTGTGATGCACCC...AAACAGGTTCAAGACTGAATAAGCCTGACAACCTGTATTCGATCCCGGGGAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163659.3 |
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| 3UTR-3UTR CCA 90 bp | GAGCGGAGGCAGATGAGAGGTTGGCAGGGTCCGATTCCCCTGGTTCACAGCTTTTCATTTGTCACTGTGTaGGCATGCACTTACAATCGT | + |
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Preference number: 2 (lower is better) Translates to: ERRQMRGWQGPIPLVHSFSFVTV*ACTYNR Trigger: ACGATTGTAAGTGCATGCCCACACAGTGACAAATGA...AAAGCTGTGAACCAGGGGAATCGGACCCTGCCAACCTCTCATCTGCCTCCGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163659.3 |
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| 3UTR-3UTR GCA 90 bp | GAAGCATTCTATCTCTTTAAGAGAGTCCCTCCTATCAATCATGCTCCACTGTCCTCAGACCTCTGTCCCTaGACCCGGGTACTTTGGGGG | + |
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Preference number: 2 (lower is better) Translates to: EAFYLFKRVPPINHAPLSSDLCP*TRVLWG Trigger: CCCCCAAAGTACCCGGGTGCAGGGACAGAGGTCTGA...GGACAGTGGAGCATGATTGATAGGAGGGACTCTCTTAAAGAGATAGAATGCTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
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| 3UTR-3UTR TCA 90 bp | TGGCTGCTGCCACTCAATCTCTGGTATGGTAGCCTGTGTCAGTGCTTCATTCCTCACACACTTAGCCTTTaGGAGAAACAAGGGTCCTGT | + |
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Preference number: 2 (lower is better) Translates to: WLLPLNLWYGSLCQCFIPHTLSL*EKQGSC Trigger: ACAGGACCCTTGTTTCTCTCAAAGGCTAAGTGTGTG...AGGAATGAAGCACTGACACAGGCTACCATACCAGAGATTGAGTGGCAGCAGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
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| 3UTR-3UTR GCA 90 bp | CCTCTAGTCAGATTCTTGATCCCAGAAAGTCAGGTTTGCAAGCTTCCGTGGACTAAGGCCACCCTGGGCTaGTGTTTAGGGAACATACTG | + |
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Preference number: 2 (lower is better) Translates to: PLVRFLIPESQVCKLPWTKATLG*CLGNIL Trigger: CAGTATGTTCCCTAAACAGCAGCCCAGGGTGGCCTT...AGTCCACGGAAGCTTGCAAACCTGACTTTCTGGGATCAAGAATCTGACTAGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
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| 3UTR-3UTR GCA 90 bp | GGAGGATCTCTGAGTTCGAGCCTACAGGGCAACACAGAGAAACCCTGTCTTGAATTGAGGGGACATGAGTaGAAGTCAAGGGACAACTTG | + |
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Preference number: 2 (lower is better) Translates to: GGSLSSSLQGNTEKPCLELRGHE*KSRDNL Trigger: CAAGTTGTCCCTTGACTTGCACTCATGTCCCCTCAA...TTCAAGACAGGGTTTCTCTGTGTTGCCCTGTAGGCTCGAACTCAGAGATCCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
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| 3UTR-3UTR CCA 90 bp | GGCAGGAGGATCTCTGAGTTCGAGCCTACAGGGCAACACAGAGAAACCCTGTCTCTTTCTTCCACTCAGTaGGTTCCAGGAATTGAACTT | + |
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Preference number: 2 (lower is better) Translates to: GRRISEFEPTGQHRETLSLSSTQ*VPGIEL Trigger: AAGTTCAATTCCTGGAACCCACTGAGTGGAAGAAAG...AGACAGGGTTTCTCTGTGTTGCCCTGTAGGCTCGAACTCAGAGATCCTCCTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163659.3 |
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| 3UTR CAA 90 bp | CGATTCCCCTGGTTCACAGCTTTCTTACTCCCTCTAGTCAGATTCTaGATCCCAGAAAGTCAGGTTTGCAAGCTTCCGTGGACTTGCTTG | + |
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Preference number: 2 (lower is better) Translates to: RFPWFTAFLLPLVRF*IPESQVCKLPWTCL Trigger: CAAGCAAGTCCACGGAAGCTTGCAAACCTGACTTTCTGGGATCAAGAATCTGACTAGAGGGAGTAAGAAAGCTGTGAACCAGGGGAATCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
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| 3UTR-3UTR TCA 90 bp | GTCAGATTCTTGATCCCAGAAAGTCAGGTTTGCAAGCTTCCGTGGACTTGCTTGAGCGAAAAATGGCCTTaGCCTTCTGCACACACACAC | + |
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Preference number: 2 (lower is better) Translates to: VRFLIPESQVCKLPWTCLSEKWP*PSAHTH Trigger: GTGTGTGTGTGCAGAAGGTCAAGGCCATTTTTCGCT...CAAGCAAGTCCACGGAAGCTTGCAAACCTGACTTTCTGGGATCAAGAATCTGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
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| 3UTR-3UTR CCA 90 bp | CACTTCCTGCCAAGTGAAGTGTTTTGTGTCTGGCTGCTGCCACTCAATCTCTGGTTGTCTCTTTTTGGCTaGCATTCCAGCTACTCTTCC | + |
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Preference number: 2 (lower is better) Translates to: HFLPSEVFCVWLLPLNLWLSLFG*HSSYSS Trigger: GGAAGAGTAGCTGGAATGCCAGCCAAAAAGAGACAA...CCAGAGATTGAGTGGCAGCAGCCAGACACAAAACACTTCACTTGGCAGGAAGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
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| 3UTR-3UTR CCA 90 bp | TGTCAGGCTTATTCAGTCTTGAACCTGTTTCCCCCACTACTCCCTTGGGAGCGGAGACTAGAGGAGATCTaGGAAAGAAACCTCTTGTCT | + |
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Preference number: 2 (lower is better) Translates to: CQAYSVLNLFPPLLPWERRLEEI*ERNLLS Trigger: AGACAAGAGGTTTCTTTCCCAGATCTCCTCTAGTCT...CCGCTCCCAAGGGAGTAGTGGGGGAAACAGGTTCAAGACTGAATAAGCCTGACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
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| 3UTR-3UTR TCA 90 bp | GGAGGATCTCTGAGTTCGAGCCTACAGGGCAACACAGAGAAACCCTGTCTTGAACCTAAAAGGGGTGAGTaGGGATTTCTATTTCCTTTA | + |
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Preference number: 2 (lower is better) Translates to: GGSLSSSLQGNTEKPCLEPKRGE*GFLFPL Trigger: TAAAGGAAATAGAAATCCTCACTCACCCCTTTTAGG...TTCAAGACAGGGTTTCTCTGTGTTGCCCTGTAGGCTCGAACTCAGAGATCCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
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| 3UTR-3UTR GCA 90 bp | TCCATTAATTACTCTTTGAGGGGACATGAGTGCAAGTCAAGGGACAACTTGTTTAAGGCCACCCTGGGCTaGTGTTTAGGGAACATACTG | + |
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Preference number: 2 (lower is better) Translates to: SINYSLRGHECKSRDNLFKATLG*CLGNIL Trigger: CAGTATGTTCCCTAAACAGCAGCCCAGGGTGGCCTT...AAACAAGTTGTCCCTTGACTTGCACTCATGTCCCCTCAAAGAGTAATTAATGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
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| 3UTR-3UTR GCA 90 bp | GAAGCATTCTATCTCTTTAAGAGAGTCCCTCCTATCAATCATGCTCCACTGTCCCGTGGACTTGCTTGGTaGAGGAGGGTTTTAAACTCA | + |
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Preference number: 2 (lower is better) Translates to: EAFYLFKRVPPINHAPLSRGLAW*RRVLNS Trigger: TGAGTTTAAAACCCTCCTGCACCAAGCAAGTCCACG...GGACAGTGGAGCATGATTGATAGGAGGGACTCTCTTAAAGAGATAGAATGCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
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| 3UTR-3UTR GCA 90 bp | GAAGCATTCTATCTCTTTAAGAGAGTCCCTCCTATCAATCATGCTCCACTGTCCGTTGGGGACACTTCCTaGCAAGTGAAGTGTTTTGTG | + |
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Preference number: 2 (lower is better) Translates to: EAFYLFKRVPPINHAPLSVGDTS*QVKCFV Trigger: CACAAAACACTTCACTTGGCAGGAAGTGTCCCCAAC...GGACAGTGGAGCATGATTGATAGGAGGGACTCTCTTAAAGAGATAGAATGCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
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| 3UTR-3UTR TCA 90 bp | CGGTTGTGGATTACAAAGCAGATTCCCATGCAACTGTACACATTTTATTTCCTACAGCTACTCTTCCACTaGGGCATGAGAATGGTGAGT | + |
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Preference number: 2 (lower is better) Translates to: RLWITKQIPMQLYTFYFLQLLFH*GMRMVS Trigger: ACTCACCATTCTCATGCCTCAGTGGAAGAGTAGCTG...TAGGAAATAAAATGTGTACAGTTGCATGGGAATCTGCTTTGTAATCCACAACCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
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| 3UTR-3UTR TCA 90 bp | GCCTATATCTATCTAGTTTGGAAGCATTCTATCTCTTTAAGAGAGTCCCTCCTAAGCGAAAAATGGCCTTaGCCTTCTGCACACACACAC | + |
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Preference number: 2 (lower is better) Translates to: AYIYLVWKHSISLRESLLSEKWP*PSAHTH Trigger: GTGTGTGTGTGCAGAAGGTCAAGGCCATTTTTCGCT...TAGGAGGGACTCTCTTAAAGAGATAGAATGCTTCCAAACTAGATAGATATAGGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
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| 3UTR-3UTR TCA 90 bp | CGGTTGTGGATTACAAAGCAGATTCCCATGCAACTGTACACATTTTATTTCCTACTCTTTGAGGGGACATaGGTGCAAGTCAAGGGACAA | + |
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Preference number: 2 (lower is better) Translates to: RLWITKQIPMQLYTFYFLLFEGT*VQVKGQ Trigger: TTGTCCCTTGACTTGCACTCATGTCCCCTCAAAGAG...TAGGAAATAAAATGTGTACAGTTGCATGGGAATCTGCTTTGTAATCCACAACCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
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| 3UTR-3UTR GCA 90 bp | CTCACGGTTGTGGATTACAAAGCAGATTCCCATGCAACTGTACACATTTTATTTAAGCTTCCGTGGACTTaGTTGGTGCAGGAGGGTTTT | + |
|
Preference number: 2 (lower is better) Translates to: LTVVDYKADSHATVHILFKLPWT*LVQEGF Trigger: AAAACCCTCCTGCACCAAGCAAGTCCACGGAAGCTT...AAATAAAATGTGTACAGTTGCATGGGAATCTGCTTTGTAATCCACAACCGTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
||
| 3UTR-3UTR GCA 90 bp | CTCACGGTTGTGGATTACAAAGCAGATTCCCATGCAACTGTACACATTTTATTTCAACATGAGCCTATCTaGACAGAGTCAGCTTGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: LTVVDYKADSHATVHILFQHEPI*TESACW Trigger: CCAGCAAGCTGACTCTGTGCAGATAGGCTCATGTTG...AAATAAAATGTGTACAGTTGCATGGGAATCTGCTTTGTAATCCACAACCGTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163659.3 |
||
| 3UTR-3UTR CCA 90 bp | CCTGCCTATATCTATCTAGTTTGGAAGCATTCTATCTCTTTAAGAGAGTCCCTCGAAGTGTTTTGTGTCTaGCTGCTGCCACTCAATCTC | + |
|
Preference number: 2 (lower is better) Translates to: PAYIYLVWKHSISLRESLEVFCV*LLPLNL Trigger: GAGATTGAGTGGCAGCAGCCAGACACAAAACACTTC...GAGGGACTCTCTTAAAGAGATAGAATGCTTCCAAACTAGATAGATATAGGCAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
||
| 3UTR-3UTR CCA 90 bp | AACCCTGCCTATATCTATCTAGTTTGGAAGCATTCTATCTCTTTAAGAGAGTCCTTCCGTGGACTTGCTTaGTGCAGGAGGGTTTTAAAC | + |
|
Preference number: 2 (lower is better) Translates to: NPAYIYLVWKHSISLRESFRGLA*CRRVLN Trigger: GTTTAAAACCCTCCTGCACCAAGCAAGTCCACGGAA...GGACTCTCTTAAAGAGATAGAATGCTTCCAAACTAGATAGATATAGGCAGGGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
||
| 3UTR-3UTR TCA 90 bp | GTGTTTGTTTTTAAAGCACATTTACAGAGCAACCCTGCCTATATCTATCTAGTTAGGCTTATTCAGTCTTaGACCTGTTTCCCCCACTAC | + |
|
Preference number: 2 (lower is better) Translates to: VFVFKAHLQSNPAYIYLVRLIQS*TCFPHY Trigger: GTAGTGGGGGAAACAGGTTCAAGACTGAATAAGCCT...AACTAGATAGATATAGGCAGGGTTGCTCTGTAAATGTGCTTTAAAAACAAACAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
||
| 3UTR-3UTR TCA 90 bp | GCCTATATCTATCTAGTTTGGAAGCATTCTATCTCTTTAAGAGAGTCCCTCCTACCATTAATTACTCTTTaGGGGGACATGAGTGCAAGT | + |
|
Preference number: 2 (lower is better) Translates to: AYIYLVWKHSISLRESLLPLITL*GDMSAS Trigger: ACTTGCACTCATGTCCCCTCAAAGAGTAATTAATGG...TAGGAGGGACTCTCTTAAAGAGATAGAATGCTTCCAAACTAGATAGATATAGGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
||
| 3UTR-3UTR GCA 90 bp | GAAGCATTCTATCTCTTTAAGAGAGTCCCTCCTATCAATCATGCTCCACTGTCCCAAAGCAGATTCCCATaGAACTGTACACATTTTATT | + |
|
Preference number: 2 (lower is better) Translates to: EAFYLFKRVPPINHAPLSQSRFP*NCTHFI Trigger: AATAAAATGTGTACAGTTGCATGGGAATCTGCTTTG...GGACAGTGGAGCATGATTGATAGGAGGGACTCTCTTAAAGAGATAGAATGCTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
||
| 3UTR-3UTR CCA 90 bp | GCCTATATCTATCTAGTTTGGAAGCATTCTATCTCTTTAAGAGAGTCCCTCCTATGCATGATTAAGACCTaGGAATCTTGCTCAGGGTAT | + |
|
Preference number: 2 (lower is better) Translates to: AYIYLVWKHSISLRESLLCMIKT*ESCSGY Trigger: ATACCCTGAGCAAGATTCCCAGGTCTTAATCATGCA...TAGGAGGGACTCTCTTAAAGAGATAGAATGCTTCCAAACTAGATAGATATAGGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
||
| 3UTR-3UTR CCA 90 bp | CATTCTATCTCTTTAAGAGAGTCCCTCCTATCAATCATGCTCCACTGTCCTCAACTATTGATGGACATTTaGGATGTGTCTACCTTTCAA | + |
|
Preference number: 2 (lower is better) Translates to: HSISLRESLLSIMLHCPQLLMDI*DVSTFQ Trigger: TTGAAAGGTAGACACATCCCAAATGTCCATCAATAG...TTGAGGACAGTGGAGCATGATTGATAGGAGGGACTCTCTTAAAGAGATAGAATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
||
| 3UTR-3UTR CCA 90 bp | GTGTTTGTTTTTAAAGCACATTTACAGAGCAACCCTGCCTATATCTATCTAGTTTGCATGATTAAGACCTaGGAATCTTGCTCAGGGTAT | + |
|
Preference number: 2 (lower is better) Translates to: VFVFKAHLQSNPAYIYLVCMIKT*ESCSGY Trigger: ATACCCTGAGCAAGATTCCCAGGTCTTAATCATGCA...AACTAGATAGATATAGGCAGGGTTGCTCTGTAAATGTGCTTTAAAAACAAACAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
||
| 3UTR-3UTR CAA 90 bp | CTCCCTTGGGAGCGGAGGCAGATGAGAGGTTGGCAGGGTCCGATTCCCCTGGTTCTGCACCCGGGTACCTaGCGGGGAGGGGGTCATCAG | + |
|
Preference number: 3 (lower is better) Translates to: LPWERRQMRGWQGPIPLVLHPGT*RGGGHQ Trigger: CTGATGACCCCCTCCCCGCAAGGTACCCGGGTGCAG...AACCAGGGGAATCGGACCCTGCCAACCTCTCATCTGCCTCCGCTCCCAAGGGAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
||
| 3UTR TCA 72 bp | GCAAGCCTGGGAGCCCAGCCGCCAGCAGTGAGGTTCTaGGTCACAACGCCGGTTCCCAGGCCAACTCCATCT | + |
|
Preference number: 3 (lower is better) Translates to: ASLGAQPPAVRF*VTTPVPRPTPS Trigger: AGATGGAGTTGGCCTGGGAACCGGCGTTGTGACTCAGAACCTCACTGCTGGCGGCTGGGCTCCCAGGCTTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
||
| 3UTR-3UTR CAA 90 bp | GGAGGATCTCTGAGTTCGAGCCTACAGGGCAACACAGAGAAACCCTGTCTTGAACTGCACCCGGGTACCTaGCGGGGAGGGGGTCATCAG | + |
|
Preference number: 3 (lower is better) Translates to: GGSLSSSLQGNTEKPCLELHPGT*RGGGHQ Trigger: CTGATGACCCCCTCCCCGCAAGGTACCCGGGTGCAG...TTCAAGACAGGGTTTCTCTGTGTTGCCCTGTAGGCTCGAACTCAGAGATCCTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
||
| 3UTR TCA 72 bp | AGTCAGCTTGCTGGCCCTCTCTTGCAACCAGAGCGCTaGATGACATGGGTGCATCACAGAGTGCGCCTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: SQLAGPLLQPER*MTWVHHRVRLA Trigger: TGCCAGGCGCACTCTGTGATGCACCCATGTCATTCAGCGCTCTGGTTGCAAGAGAGGGCCAGCAAGCTGACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163659.3 |
||
| 3UTR CCA 72 bp | CCACTACTCCCTTGGGAGCGGAGGCAGATGAGAGGTTaGCAGGGTCCGATTCCCCTGGTTCACAGCTTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: PLLPWERRQMRG*QGPIPLVHSFL Trigger: AAGAAAGCTGTGAACCAGGGGAATCGGACCCTGCCAACCTCTCATCTGCCTCCGCTCCCAAGGGAGTAGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
||
| 3UTR CCA 72 bp | TATTCAGTCTTGAACCTGTTTCCCCCACTACTCCCTTaGGAGCGGAGGCAGATGAGAGGTTGGCAGGGTCCG | + |
|
Preference number: 3 (lower is better) Translates to: YSVLNLFPPLLP*ERRQMRGWQGP Trigger: CGGACCCTGCCAACCTCTCATCTGCCTCCGCTCCCAAGGGAGTAGTGGGGGAAACAGGTTCAAGACTGAATA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
||
| 3UTR CCA 72 bp | CCTCCTATCAATCATGCTCCACTGTCCTCAAGGCCCTaGCAGCTCCATTTGTGGCTGTCCCTGTTGGGGACA | + |
|
Preference number: 3 (lower is better) Translates to: PPINHAPLSSRP*QLHLWLSLLGT Trigger: TGTCCCCAACAGGGACAGCCACAAATGGAGCTGCCAGGGCCTTGAGGACAGTGGAGCATGATTGATAGGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
||
| 3UTR-3UTR CAA 90 bp | TGGGAGCGGAGGCAGATGAGAGGTTGGCAGGGTCCGATTCCCCTGGTTCACAGCCCTCTAGTCAGATTCTaGATCCCAGAAAGTCAGGTT | + |
|
Preference number: 3 (lower is better) Translates to: WERRQMRGWQGPIPLVHSPLVRF*IPESQV Trigger: AACCTGACTTTCTGGGATCAAGAATCTGACTAGAGG...GCTGTGAACCAGGGGAATCGGACCCTGCCAACCTCTCATCTGCCTCCGCTCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
||
| 3UTR GCA 72 bp | GCTCCATTTGTGGCTGTCCCTGTTGGGGACACTTCCTaGCAAGTGAAGTGTTTTGTGTCTGGCTGCTGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: APFVAVPVGDTS*QVKCFVSGCCH Trigger: GTGGCAGCAGCCAGACACAAAACACTTCACTTGGCAGGAAGTGTCCCCAACAGGGACAGCCACAAATGGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
||
| 3UTR TCA 72 bp | CGGGATCGAATACAGGTTGTCAGGCTTATTCAGTCTTaGACCTGTTTCCCCCACTACTCCCTTGGGAGCGGA | + |
|
Preference number: 3 (lower is better) Translates to: RDRIQVVRLIQS*TCFPHYSLGSG Trigger: TCCGCTCCCAAGGGAGTAGTGGGGGAAACAGGTTCAAGACTGAATAAGCCTGACAACCTGTATTCGATCCCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
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| 3UTR TCA 72 bp | GGTAGCCTGTGTCAGTGCTTCATTCCTGTTCGTGGCTaGGCAATAGTCCACTCTGGACATCCCACAGGTGTT | + |
|
Preference number: 3 (lower is better) Translates to: GSLCQCFIPVRG*AIVHSGHPTGV Trigger: AACACCTGTGGGATGTCCAGAGTGGACTATTGCTCAGCCACGAACAGGAATGAAGCACTGACACAGGCTACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
||
| 3UTR TCA 72 bp | TTGTGGCTGTCCCTGTTGGGGACACTTCCTGCCAAGTaGAGTGTTTTGTGTCTGGCTGCTGCCACTCAATCT | + |
|
Preference number: 3 (lower is better) Translates to: LWLSLLGTLPAK*SVLCLAAATQS Trigger: AGATTGAGTGGCAGCAGCCAGACACAAAACACTTCACTTGGCAGGAAGTGTCCCCAACAGGGACAGCCACAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
||
| 3UTR CCA 72 bp | TGGGGACACTTCCTGCCAAGTGAAGTGTTTTGTGTCTaGCTGCTGCCACTCAATCTCTGGTATGGTAGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: WGHFLPSEVFCV*LLPLNLWYGSL Trigger: CAGGCTACCATACCAGAGATTGAGTGGCAGCAGCCAGACACAAAACACTTCACTTGGCAGGAAGTGTCCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
||
| 3UTR TCA 72 bp | CCAGGAATTGAACTTGGGTTGTCAGTCTTGACAACATaGGCCTATCTGCACAGAGTCAGCTTGCTGGCCCTC | + |
|
Preference number: 3 (lower is better) Translates to: PGIELGLSVLTT*AYLHRVSLLAL Trigger: GAGGGCCAGCAAGCTGACTCTGTGCAGATAGGCTCATGTTGTCAAGACTGACAACCCAAGTTCAATTCCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163659.3 |
||
| 3UTR GCA 72 bp | CCTCTAGTCAGATTCTTGATCCCAGAAAGTCAGGTTTaGAAGCTTCCGTGGACTTGCTTGGTGCAGGAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: PLVRFLIPESQV*KLPWTCLVQEG Trigger: ACCCTCCTGCACCAAGCAAGTCCACGGAAGCTTGCAAACCTGACTTTCTGGGATCAAGAATCTGACTAGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
||
| 3UTR CCA 72 bp | CAGAAAGTCAGGTTTGCAAGCTTCCGTGGACTTGCTTaGTGCAGGAGGGTTTTAAACTCACGCACTATCCCG | + |
|
Preference number: 3 (lower is better) Translates to: QKVRFASFRGLA*CRRVLNSRTIP Trigger: CGGGATAGTGCGTGAGTTTAAAACCCTCCTGCACCAAGCAAGTCCACGGAAGCTTGCAAACCTGACTTTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
||
| 3UTR GCA 72 bp | AGGCATGAGAATGGTGAGTTCAAGGCCACCCTGGGCTaGTGTTTAGGGAACATACTGAACTTAGAAGAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: RHENGEFKATLG*CLGNILNLEED Trigger: GTCCTCTTCTAAGTTCAGTATGTTCCCTAAACAGCAGCCCAGGGTGGCCTTGAACTCACCATTCTCATGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
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| 3UTR GCA 72 bp | ACTTCCTGCCAAGTGAAGTGTTTTGTGTCTGGCTGCTaGCACTCAATCTCTGGTATGGTAGCCTGTGTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: TSCQVKCFVSGC*HSISGMVACVS Trigger: ACTGACACAGGCTACCATACCAGAGATTGAGTGGCAGCAGCCAGACACAAAACACTTCACTTGGCAGGAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
||
| 3UTR-3UTR CAA 90 bp | CACTTCCTGCCAAGTGAAGTGTTTTGTGTCTGGCTGCTGCCACTCAATCTCTGGTGGGAAAGAAACCTCTaGTCTCTTTTTGGCTGGCAT | + |
|
Preference number: 3 (lower is better) Translates to: HFLPSEVFCVWLLPLNLWWERNL*SLFGWH Trigger: ATGCCAGCCAAAAAGAGACAAGAGGTTTCTTTCCCA...CCAGAGATTGAGTGGCAGCAGCCAGACACAAAACACTTCACTTGGCAGGAAGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
||
| 3UTR GCA 72 bp | AAAGTCAGGTTTGCAAGCTTCCGTGGACTTGCTTGGTaGAGGAGGGTTTTAAACTCACGCACTATCCCGATT | + |
|
Preference number: 3 (lower is better) Translates to: KVRFASFRGLAW*RRVLNSRTIPI Trigger: AATCGGGATAGTGCGTGAGTTTAAAACCCTCCTGCACCAAGCAAGTCCACGGAAGCTTGCAAACCTGACTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
||
| 3UTR GCA 72 bp | ATCCCAGAAAGTCAGGTTTGCAAGCTTCCGTGGACTTaGTTGGTGCAGGAGGGTTTTAAACTCACGCACTAT | + |
|
Preference number: 3 (lower is better) Translates to: IPESQVCKLPWT*LVQEGFKLTHY Trigger: ATAGTGCGTGAGTTTAAAACCCTCCTGCACCAAGCAAGTCCACGGAAGCTTGCAAACCTGACTTTCTGGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
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| 3UTR CCA 72 bp | TTCTTGATCCCAGAAAGTCAGGTTTGCAAGCTTCCGTaGACTTGCTTGGTGCAGGAGGGTTTTAAACTCACG | + |
|
Preference number: 3 (lower is better) Translates to: FLIPESQVCKLP*TCLVQEGFKLT Trigger: CGTGAGTTTAAAACCCTCCTGCACCAAGCAAGTCCACGGAAGCTTGCAAACCTGACTTTCTGGGATCAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
||
| 3UTR CCA 72 bp | GAAGTGTTTTGTGTCTGGCTGCTGCCACTCAATCTCTaGTATGGTAGCCTGTGTCAGTGCTTCATTCCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: EVFCVWLLPLNL*YGSLCQCFIPV Trigger: AACAGGAATGAAGCACTGACACAGGCTACCATACCAGAGATTGAGTGGCAGCAGCCAGACACAAAACACTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
||
| 3UTR-3UTR CAA 90 bp | GGAGGATCTCTGAGTTCGAGCCTACAGGGCAACACAGAGAAACCCTGTCTTGAATCTATTGATGGACATTaGGGATGTGTCTACCTTTCA | + |
|
Preference number: 3 (lower is better) Translates to: GGSLSSSLQGNTEKPCLESIDGH*GCVYLS Trigger: TGAAAGGTAGACACATCCCAAATGTCCATCAATAGA...TTCAAGACAGGGTTTCTCTGTGTTGCCCTGTAGGCTCGAACTCAGAGATCCTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
||
| 3UTR-3UTR CAA 90 bp | CGGTTGTGGATTACAAAGCAGATTCCCATGCAACTGTACACATTTTATTTCCTACTGCACAGAGTCAGCTaGCTGGCCCTCTCTTGCAAC | + |
|
Preference number: 3 (lower is better) Translates to: RLWITKQIPMQLYTFYFLLHRVS*LALSCN Trigger: GTTGCAAGAGAGGGCCAGCAAGCTGACTCTGTGCAG...TAGGAAATAAAATGTGTACAGTTGCATGGGAATCTGCTTTGTAATCCACAACCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163659.3 |
||
| 3UTR TCA 72 bp | TGTGGGCATGCACTTACAATCGTGTGTGTAAAGAACTaGCTTGCGGAAGTCAGTCTTTCTTCCACTCAGTGG | + |
|
Preference number: 3 (lower is better) Translates to: CGHALTIVCVKN*LAEVSLSSTQW Trigger: CCACTGAGTGGAAGAAAGACTGACTTCCGCAAGTCAGTTCTTTACACACACGATTGTAAGTGCATGCCCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163659.3 |
||
| 3UTR GCA 72 bp | GCATGCACTTACAATCGTGTGTGTAAAGAACTGACTTaGGGAAGTCAGTCTTTCTTCCACTCAGTGGGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: ACTYNRVCKELT*GSQSFFHSVGS Trigger: GGAACCCACTGAGTGGAAGAAAGACTGACTTCCGCAAGTCAGTTCTTTACACACACGATTGTAAGTGCATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163659.3 |
||
| 3UTR-3UTR CAA 90 bp | GTGTTTGTTTTTAAAGCACATTTACAGAGCAACCCTGCCTATATCTATCTAGTTGAGGCAGATGAGAGGTaGGCAGGGTCCGATTCCCCT | + |
|
Preference number: 3 (lower is better) Translates to: VFVFKAHLQSNPAYIYLVEADER*AGSDSP Trigger: AGGGGAATCGGACCCTGCCAACCTCTCATCTGCCTC...AACTAGATAGATATAGGCAGGGTTGCTCTGTAAATGTGCTTTAAAAACAAACAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
||
| 3UTR-3UTR CAA 90 bp | GAAGCATTCTATCTCTTTAAGAGAGTCCCTCCTATCAATCATGCTCCACTGTCCCAGGCTTATTCAGTCTaGAACCTGTTTCCCCCACTA | + |
|
Preference number: 3 (lower is better) Translates to: EAFYLFKRVPPINHAPLSQAYSV*NLFPPL Trigger: TAGTGGGGGAAACAGGTTCAAGACTGAATAAGCCTG...GGACAGTGGAGCATGATTGATAGGAGGGACTCTCTTAAAGAGATAGAATGCTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
||
| 3UTR TCA 72 bp | AGTCAGTCTTTCTTCCACTCAGTGGGTTCCAGGAATTaGACTTGGGTTGTCAGTCTTGACAACATGAGCCTA | + |
|
Preference number: 3 (lower is better) Translates to: SQSFFHSVGSRN*TWVVSLDNMSL Trigger: TAGGCTCATGTTGTCAAGACTGACAACCCAAGTTCAATTCCTGGAACCCACTGAGTGGAAGAAAGACTGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163659.3 |
||
| 3UTR CCA 72 bp | TTAAGACCTGGGAATCTTGCTCAGGGTATCTGTTCGTaGGAGTCTATGTTCTTTCAAAGACTAGAGGAGATC | + |
|
Preference number: 3 (lower is better) Translates to: LRPGNLAQGICS*ESMFFQRLEEI Trigger: GATCTCCTCTAGTCTTTGAAAGAACATAGACTCCCACGAACAGATACCCTGAGCAAGATTCCCAGGTCTTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
||
| 3UTR-3UTR CAA 90 bp | CCTGCCTATATCTATCTAGTTTGGAAGCATTCTATCTCTTTAAGAGAGTCCCTCTGGGAAAGAAACCTCTaGTCTCTTTTTGGCTGGCAT | + |
|
Preference number: 3 (lower is better) Translates to: PAYIYLVWKHSISLRESLWERNL*SLFGWH Trigger: ATGCCAGCCAAAAAGAGACAAGAGGTTTCTTTCCCA...GAGGGACTCTCTTAAAGAGATAGAATGCTTCCAAACTAGATAGATATAGGCAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
||
| 3UTR-3UTR CAA 90 bp | TCCATTAATTACTCTTTGAGGGGACATGAGTGCAAGTCAAGGGACAACTTGTTTGCTAGATATACTCATTaGTCACTGTGTGGGCATGCA | + |
|
Preference number: 3 (lower is better) Translates to: SINYSLRGHECKSRDNLFARYTH*SLCGHA Trigger: TGCATGCCCACACAGTGACAAATGAGTATATCTAGC...AAACAAGTTGTCCCTTGACTTGCACTCATGTCCCCTCAAAGAGTAATTAATGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163659.3 |
||
| 3UTR-3UTR CAA 90 bp | GTGTTTGTTTTTAAAGCACATTTACAGAGCAACCCTGCCTATATCTATCTAGTTCAAGGGACAACTTGTTaGAGTAGCGCTATGTGGGTT | + |
|
Preference number: 3 (lower is better) Translates to: VFVFKAHLQSNPAYIYLVQGTTC*SSAMWV Trigger: AACCCACATAGCGCTACTCAAACAAGTTGTCCCTTG...AACTAGATAGATATAGGCAGGGTTGCTCTGTAAATGTGCTTTAAAAACAAACAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
||
| 3UTR CCA 72 bp | CATTTACAGAGCAACCCTGCCTATATCTATCTAGTTTaGAAGCATTCTATCTCTTTAAGAGAGTCCCTCCTA | + |
|
Preference number: 3 (lower is better) Translates to: HLQSNPAYIYLV*KHSISLRESLL Trigger: TAGGAGGGACTCTCTTAAAGAGATAGAATGCTTCCAAACTAGATAGATATAGGCAGGGTTGCTCTGTAAATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
||
| 3UTR-3UTR CAA 90 bp | CGGTTGTGGATTACAAAGCAGATTCCCATGCAACTGTACACATTTTATTTCCTAATTTTAAATTTTCTCTaGGGCAGTGGTAGTACATGC | + |
|
Preference number: 3 (lower is better) Translates to: RLWITKQIPMQLYTFYFLILNFL*GSGSTC Trigger: GCATGTACTACCACTGCCCAAGAGAAAATTTAAAAT...TAGGAAATAAAATGTGTACAGTTGCATGGGAATCTGCTTTGTAATCCACAACCG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
||
| 3UTR-3UTR CAA 90 bp | CTCACGGTTGTGGATTACAAAGCAGATTCCCATGCAACTGTACACATTTTATTTATTTTAAATTTTCTCTaGGGCAGTGGTAGTACATGC | + |
|
Preference number: 3 (lower is better) Translates to: LTVVDYKADSHATVHILFILNFL*GSGSTC Trigger: GCATGTACTACCACTGCCCAAGAGAAAATTTAAAAT...AAATAAAATGTGTACAGTTGCATGGGAATCTGCTTTGTAATCCACAACCGTGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
||
| CDS-3UTR GCA 90 bp | TCCCCCACTACTCCCTTGGGAGCGGAGGCAGATGAGAGGTTGGCAGGGTCCGATGCGGTCCAGGAGCTCTaGGGCCTCCTGCCAGTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SPTTPLGAEADERLAGSDAVQEL*GLLPVG Trigger: GCCAACTGGCAGGAGGCCGCAGAGCTCCTGGACCGC...ATCGGACCCTGCCAACCTCTCATCTGCCTCCGCTCCCAAGGGAGTAGTGGGGGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
||
| CDS-3UTR GCA 90 bp | TGGGAGCGGAGGCAGATGAGAGGTTGGCAGGGTCCGATTCCCCTGGTTCACAGCCAGGGCCAGCTGTGCTaGCCGCAGCACGTAGAACTC | + |
|
Preference number: 4 (lower is better) Translates to: WERRQMRGWQGPIPLVHSQGQLC*PQHVEL Trigger: GAGTTCTACGTGCTGCGGGCAGCACAGCTGGCCCTG...GCTGTGAACCAGGGGAATCGGACCCTGCCAACCTCTCATCTGCCTCCGCTCCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
||
| CDS-3UTR CCA 90 bp | TTGAACCTGTTTCCCCCACTACTCCCTTGGGAGCGGAGGCAGATGAGAGGTTGGACTGGGGCAAAGGCCTaGCACTGGGGACAGGCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: LNLFPPLLPWERRQMRGWTGAKA*HWGQAP Trigger: CGGCGCCTGTCCCCAGTGCCAGGCCTTTGCCCCAGT...CCAACCTCTCATCTGCCTCCGCTCCCAAGGGAGTAGTGGGGGAAACAGGTTCAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
||
| 3UTR CAA 72 bp | CCCACTACTCCCTTGGGAGCGGAGGCAGATGAGAGGTaGGCAGGGTCCGATTCCCCTGGTTCACAGCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PTTPLGAEADER*AGSDSPGSQLS Trigger: AGAAAGCTGTGAACCAGGGGAATCGGACCCTGCCAACCTCTCATCTGCCTCCGCTCCCAAGGGAGTAGTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
||
| CDS-3UTR TCA 90 bp | TGGGAGCGGAGGCAGATGAGAGGTTGGCAGGGTCCGATTCCCCTGGTTCACAGCTTTCAGGCATGTCCCTaGGGAAGAGGTCCTGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: WERRQMRGWQGPIPLVHSFQACP*GRGPVA Trigger: AGCAACAGGACCTCTTCCTCAGGGACATGCCTGAAA...GCTGTGAACCAGGGGAATCGGACCCTGCCAACCTCTCATCTGCCTCCGCTCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
||
| CDS-3UTR GCA 90 bp | TGTCAGGCTTATTCAGTCTTGAACCTGTTTCCCCCACTACTCCCTTGGGAGCGGGACCAGGGCCAGCTGTaGTGCCCGCAGCACGTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: CQAYSVLNLFPPLLPWERDQGQL*CPQHVE Trigger: TTCTACGTGCTGCGGGCAGCACAGCTGGCCCTGGTC...CCGCTCCCAAGGGAGTAGTGGGGGAAACAGGTTCAAGACTGAATAAGCCTGACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
||
| CDS-3UTR CCA 90 bp | TGGCTGCTGCCACTCAATCTCTGGTATGGTAGCCTGTGTCAGTGCTTCATTCCTCGGCCTCCTGCCAGTTaGCAAAGCAGGCGGGTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: WLLPLNLWYGSLCQCFIPRPPAS*QSRRVP Trigger: TGGGACCCGCCTGCTTTGCCAACTGGCAGGAGGCCG...AGGAATGAAGCACTGACACAGGCTACCATACCAGAGATTGAGTGGCAGCAGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
||
| CDS-3UTR GCA 90 bp | CATGAGCCTATCTGCACAGAGTCAGCTTGCTGGCCCTCTCTTGCAACCAGAGCGAGGAAGAGGTCCTGTTaGTCCTCTGTAGGGTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: HEPICTESACWPSLATRARKRSC*SSVGSW Trigger: CCAGGACCCTACAGAGGAGCAACAGGACCTCTTCCT...CGCTCTGGTTGCAAGAGAGGGCCAGCAAGCTGACTCTGTGCAGATAGGCTCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163659.3 |
||
| CDS-3UTR GCA 90 bp | CCTCTAGTCAGATTCTTGATCCCAGAAAGTCAGGTTTGCAAGCTTCCGTGGACTGCGGTCCAGGAGCTCTaGGGCCTCCTGCCAGTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PLVRFLIPESQVCKLPWTAVQEL*GLLPVG Trigger: GCCAACTGGCAGGAGGCCGCAGAGCTCCTGGACCGC...AGTCCACGGAAGCTTGCAAACCTGACTTTCTGGGATCAAGAATCTGACTAGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
||
| CDS-3UTR GCA 90 bp | GTCAGATTCTTGATCCCAGAAAGTCAGGTTTGCAAGCTTCCGTGGACTTGCTTGCCGGTTGCAGGAAGCTaGGGTCCAGGAGCTCTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: VRFLIPESQVCKLPWTCLPVAGS*GPGALR Trigger: CCGCAGAGCTCCTGGACCGCAGCTTCCTGCAACCGG...CAAGCAAGTCCACGGAAGCTTGCAAACCTGACTTTCTGGGATCAAGAATCTGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
||
| 3UTR CAA 72 bp | TTATTCAGTCTTGAACCTGTTTCCCCCACTACTCCCTaGGGAGCGGAGGCAGATGAGAGGTTGGCAGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LFSLEPVSPTTP*GAEADERLAGS Trigger: GGACCCTGCCAACCTCTCATCTGCCTCCGCTCCCAAGGGAGTAGTGGGGGAAACAGGTTCAAGACTGAATAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
||
| CDS-3UTR TCA 90 bp | TGCTTGGTGCAGGAGGGTTTTAAACTCACGCACTATCCCGATTCGGTCGCCAGGTTTCAGGCATGTCCCTaGGGAAGAGGTCCTGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: CLVQEGFKLTHYPDSVARFQACP*GRGPVA Trigger: AGCAACAGGACCTCTTCCTCAGGGACATGCCTGAAA...CCTGGCGACCGAATCGGGATAGTGCGTGAGTTTAAAACCCTCCTGCACCAAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
||
| CDS-3UTR GCA 90 bp | TGTCAGGCTTATTCAGTCTTGAACCTGTTTCCCCCACTACTCCCTTGGGAGCGGCCTACGGCTCAGCTCTaGCTCTGTCTCCACTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: CQAYSVLNLFPPLLPWERPTAQL*LCLHFI Trigger: GATGAAGTGGAGACAGAGGCAGAGCTGAGCCGTAGG...CCGCTCCCAAGGGAGTAGTGGGGGAAACAGGTTCAAGACTGAATAAGCCTGACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
||
| CDS-3UTR CCA 90 bp | GAAGCATTCTATCTCTTTAAGAGAGTCCCTCCTATCAATCATGCTCCACTGTCCACTGGGGCAAAGGCCTaGCACTGGGGACAGGCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: EAFYLFKRVPPINHAPLSTGAKA*HWGQAP Trigger: CGGCGCCTGTCCCCAGTGCCAGGCCTTTGCCCCAGT...GGACAGTGGAGCATGATTGATAGGAGGGACTCTCTTAAAGAGATAGAATGCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
||
| CDS-3UTR TCA 90 bp | GTGTCTGGCTGCTGCCACTCAATCTCTGGTATGGTAGCCTGTGTCAGTGCTTCACGTAGAACTCGTCAGTaGGCCGCACGAAGAAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VSGCCHSISGMVACVSASRRTRQ*AARRSL Trigger: AAGACTTCTTCGTGCGGCTCACTGACGAGTTCTACG...TGAAGCACTGACACAGGCTACCATACCAGAGATTGAGTGGCAGCAGCCAGACAC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
||
| CDS-3UTR TCA 90 bp | CCTCTAGTCAGATTCTTGATCCCAGAAAGTCAGGTTTGCAAGCTTCCGTGGACTACAACCGCTGGCAGTTaGCGGACAGAGAACTGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: PLVRFLIPESQVCKLPWTTTAGS*RTENWR Trigger: GCGCCAGTTCTCTGTCCGTCAACTGCCAGCGGTTGT...AGTCCACGGAAGCTTGCAAACCTGACTTTCTGGGATCAAGAATCTGACTAGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
||
| 3UTR CAA 72 bp | GTAGCGCTATGTGGGTTCCCCGGGATCGAATACAGGTaGTCAGGCTTATTCAGTCTTGAACCTGTTTCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: VALCGFPGIEYR*SGLFSLEPVSP Trigger: GGGGGAAACAGGTTCAAGACTGAATAAGCCTGACAACCTGTATTCGATCCCGGGGAACCCACATAGCGCTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
||
| CDS-3UTR GCA 90 bp | CCTCTAGTCAGATTCTTGATCCCAGAAAGTCAGGTTTGCAAGCTTCCGTGGACTCCTACGGCTCAGCTCTaGCTCTGTCTCCACTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: PLVRFLIPESQVCKLPWTPTAQL*LCLHFI Trigger: GATGAAGTGGAGACAGAGGCAGAGCTGAGCCGTAGG...AGTCCACGGAAGCTTGCAAACCTGACTTTCTGGGATCAAGAATCTGACTAGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
||
| 3UTR CAA 72 bp | CCAGAAAGTCAGGTTTGCAAGCTTCCGTGGACTTGCTaGGTGCAGGAGGGTTTTAAACTCACGCACTATCCC | + |
|
Preference number: 4 (lower is better) Translates to: PESQVCKLPWTC*VQEGFKLTHYP Trigger: GGGATAGTGCGTGAGTTTAAAACCCTCCTGCACCAAGCAAGTCCACGGAAGCTTGCAAACCTGACTTTCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
||
| CDS-3UTR GCA 90 bp | GAAGCATTCTATCTCTTTAAGAGAGTCCCTCCTATCAATCATGCTCCACTGTCCAGGAAGAGGTCCTGTTaGTCCTCTGTAGGGTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: EAFYLFKRVPPINHAPLSRKRSC*SSVGSW Trigger: CCAGGACCCTACAGAGGAGCAACAGGACCTCTTCCT...GGACAGTGGAGCATGATTGATAGGAGGGACTCTCTTAAAGAGATAGAATGCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
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| CDS-3UTR CCA 90 bp | GTGTTTGTTTTTAAAGCACATTTACAGAGCAACCCTGCCTATATCTATCTAGTTCGGCCTCCTGCCAGTTaGCAAAGCAGGCGGGTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: VFVFKAHLQSNPAYIYLVRPPAS*QSRRVP Trigger: TGGGACCCGCCTGCTTTGCCAACTGGCAGGAGGCCG...AACTAGATAGATATAGGCAGGGTTGCTCTGTAAATGTGCTTTAAAAACAAACAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
||
| CDS-3UTR GCA 90 bp | GTGTTTGTTTTTAAAGCACATTTACAGAGCAACCCTGCCTATATCTATCTAGTTCAGGGCCAGCTGTGCTaGCCGCAGCACGTAGAACTC | + |
|
Preference number: 4 (lower is better) Translates to: VFVFKAHLQSNPAYIYLVQGQLC*PQHVEL Trigger: GAGTTCTACGTGCTGCGGGCAGCACAGCTGGCCCTG...AACTAGATAGATATAGGCAGGGTTGCTCTGTAAATGTGCTTTAAAAACAAACAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
||
| CDS-3UTR TCA 90 bp | TCCATTAATTACTCTTTGAGGGGACATGAGTGCAAGTCAAGGGACAACTTGTTTCGTAGAACTCGTCAGTaGGCCGCACGAAGAAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SINYSLRGHECKSRDNLFRRTRQ*AARRSL Trigger: AAGACTTCTTCGTGCGGCTCACTGACGAGTTCTACG...AAACAAGTTGTCCCTTGACTTGCACTCATGTCCCCTCAAAGAGTAATTAATGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
||
| 3UTR CAA 72 bp | TTTCAAAGACTAGAGGAGATCTGGGAAAGAAACCTCTaGTCTCTTTTTGGCTGGCATTCCAGCTACTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FQRLEEIWERNL*SLFGWHSSYSS Trigger: GGAAGAGTAGCTGGAATGCCAGCCAAAAAGAGACAAGAGGTTTCTTTCCCAGATCTCCTCTAGTCTTTGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
||
| 3UTR CAA 72 bp | ACATTTACAGAGCAACCCTGCCTATATCTATCTAGTTaGGAAGCATTCTATCTCTTTAAGAGAGTCCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TFTEQPCLYLSS*EAFYLFKRVPP Trigger: AGGAGGGACTCTCTTAAAGAGATAGAATGCTTCCAAACTAGATAGATATAGGCAGGGTTGCTCTGTAAATGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
||
| 3UTR CAA 72 bp | AACAAAATCCCAACTATTTTTGCTAGATATACTCATTaGTCACTGTGTGGGCATGCACTTACAATCGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: NKIPTIFARYTH*SLCGHALTIVC Trigger: ACACACGATTGTAAGTGCATGCCCACACAGTGACAAATGAGTATATCTAGCAAAAATAGTTGGGATTTTGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163659.3 |
||
| CDS CCA 90 bp | TCTGCGGCCTCCTGCCAGTTGGCAAAGCAGGCGGGTCCCAGACGCTaGATCTCCTCCGTGGCGTCGCTTGTCAGCACGTCCCCACCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: SAASCQLAKQAGPRR*ISSVASLVSTSPPG Trigger: GCCTGGTGGGGACGTGCTGACAAGCGACGCCACGGAGGAGATCCAGCGTCTGGGACCCGCCTGCTTTGCCAACTGGCAGGAGGCCGCAGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
||
| CDS GCA 90 bp | TCCTCCGGTTGCAGGAAGCTGCGGTCCAGGAGCTCTGCGGCCTCCTaGCAGTTGGCAAAGCAGGCGGGTCCCAGACGCTGGATCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SSGCRKLRSRSSAAS*QLAKQAGPRRWISS Trigger: GGAGGAGATCCAGCGTCTGGGACCCGCCTGCTTTGCCAACTGGCAGGAGGCCGCAGAGCTCCTGGACCGCAGCTTCCTGCAACCGGAGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
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| CDS GCA 90 bp | GGCTCGGTGATGCTGCGCCGCGCAGGCTCATCCAAATCCTCCGGTTaGAGGAAGCTGCGGTCCAGGAGCTCTGCGGCCTCCTGCCAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: GSVMLRRAGSSKSSG*RKLRSRSSAASCQL Trigger: CAACTGGCAGGAGGCCGCAGAGCTCCTGGACCGCAGCTTCCTGCAACCGGAGGATTTGGATGAGCCTGCGCGGCGCAGCATCACCGAGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
||
| CDS CCA 90 bp | GTTGCAGGAAGCTGCGGTCCAGGAGCTCTGCGGCCTCCTGCCAGTTaGCAAAGCAGGCGGGTCCCAGACGCTGGATCTCCTCCGTGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: VAGSCGPGALRPPAS*QSRRVPDAGSPPWR Trigger: ACGCCACGGAGGAGATCCAGCGTCTGGGACCCGCCTGCTTTGCCAACTGGCAGGAGGCCGCAGAGCTCCTGGACCGCAGCTTCCTGCAAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
||
| CDS GCA 90 bp | TGCTGCGCCGCGCAGGCTCATCCAAATCCTCCGGTTGCAGGAAGCTaGGGTCCAGGAGCTCTGCGGCCTCCTGCCAGTTGGCAAAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: CCAAQAHPNPPVAGS*GPGALRPPASWQSR Trigger: CCTGCTTTGCCAACTGGCAGGAGGCCGCAGAGCTCCTGGACCGCAGCTTCCTGCAACCGGAGGATTTGGATGAGCCTGCGCGGCGCAGCA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
||
| CDS GCA 90 bp | CTCATCCAAATCCTCCGGTTGCAGGAAGCTGCGGTCCAGGAGCTCTaGGGCCTCCTGCCAGTTGGCAAAGCAGGCGGGTCCCAGACGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LIQILRLQEAAVQEL*GLLPVGKAGGSQTL Trigger: CAGCGTCTGGGACCCGCCTGCTTTGCCAACTGGCAGGAGGCCGCAGAGCTCCTGGACCGCAGCTTCCTGCAACCGGAGGATTTGGATGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
||
| CDS CCA 90 bp | AGCCGCACGAAGAAGTCTTTGAGGACTGGGGCAAAGGCCTGGCACTaGGGACAGGCGCCGGCGCCGAAGAACAGCAACACCAGACGATTC | + |
|
Preference number: 5 (lower is better) Translates to: SRTKKSLRTGAKAWH*GQAPAPKNSNTRRF Trigger: GAATCGTCTGGTGTTGCTGTTCTTCGGCGCCGGCGCCTGTCCCCAGTGCCAGGCCTTTGCCCCAGTCCTCAAAGACTTCTTCGTGCGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
||
| CDS CCA 90 bp | GTCGCTTGTCAGCACGTCCCCACCAGGCTTAAGTACCACAACCGCTaGCAGTTGACGGACAGAGAACTGGCGCCCGAGGTCCCTCCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: VACQHVPTRLKYHNR*QLTDRELAPEVPPQ Trigger: CTGAGGAGGGACCTCGGGCGCCAGTTCTCTGTCCGTCAACTGCCAGCGGTTGTGGTACTTAAGCCTGGTGGGGACGTGCTGACAAGCGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
||
| CDS-3UTR CAA 90 bp | GGCAGGAGGATCTCTGAGTTCGAGCCTACAGGGCAACACAGAGAAACCCTGTCTGCGGCCTCCTGCCAGTaGGCAAAGCAGGCGGGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: GRRISEFEPTGQHRETLSAASCQ*AKQAGP Trigger: GGGACCCGCCTGCTTTGCCAACTGGCAGGAGGCCGC...AGACAGGGTTTCTCTGTGTTGCCCTGTAGGCTCGAACTCAGAGATCCTCCTGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
||
| CDS GCA 90 bp | CTCCTCTGTAGGGTCCTGGGACACATAGACCAGGGCCAGCTGTGCTaGCCGCAGCACGTAGAACTCGTCAGTGAGCCGCACGAAGAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: LLCRVLGHIDQGQLC*PQHVELVSEPHEEV Trigger: GACTTCTTCGTGCGGCTCACTGACGAGTTCTACGTGCTGCGGGCAGCACAGCTGGCCCTGGTCTATGTGTCCCAGGACCCTACAGAGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
||
| CDS-3UTR CAA 90 bp | TGGGAGCGGAGGCAGATGAGAGGTTGGCAGGGTCCGATTCCCCTGGTTCACAGCGAGGAAGAGGTCCTGTaGCTCCTCTGTAGGGTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: WERRQMRGWQGPIPLVHSEEEVL*LLCRVL Trigger: CAGGACCCTACAGAGGAGCAACAGGACCTCTTCCTC...GCTGTGAACCAGGGGAATCGGACCCTGCCAACCTCTCATCTGCCTCCGCTCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
||
| CDS-3UTR CAA 90 bp | TGCTTGGTGCAGGAGGGTTTTAAACTCACGCACTATCCCGATTCGGTCGCCAGGCCTCCGTGGCGTCGCTaGTCAGCACGTCCCCACCAG | + |
|
Preference number: 5 (lower is better) Translates to: CLVQEGFKLTHYPDSVARPPWRR*SARPHQ Trigger: CTGGTGGGGACGTGCTGACAAGCGACGCCACGGAGG...CCTGGCGACCGAATCGGGATAGTGCGTGAGTTTAAAACCCTCCTGCACCAAGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
||
| CDS TCA 90 bp | GTCAGCACGTCCCCACCAGGCTTAAGTACCACAACCGCTGGCAGTTaGCGGACAGAGAACTGGCGCCCGAGGTCCCTCCTCAGTTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: VSTSPPGLSTTTAGS*RTENWRPRSLLSSS Trigger: TGATGAACTGAGGAGGGACCTCGGGCGCCAGTTCTCTGTCCGTCAACTGCCAGCGGTTGTGGTACTTAAGCCTGGTGGGGACGTGCTGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
||
| CDS GCA 90 bp | TTGCTCCTCTGTAGGGTCCTGGGACACATAGACCAGGGCCAGCTGTaGTGCCCGCAGCACGTAGAACTCGTCAGTGAGCCGCACGAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: LLLCRVLGHIDQGQL*CPQHVELVSEPHEE Trigger: TTCTTCGTGCGGCTCACTGACGAGTTCTACGTGCTGCGGGCAGCACAGCTGGCCCTGGTCTATGTGTCCCAGGACCCTACAGAGGAGCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
||
| CDS-3UTR CAA 90 bp | TGGCTGCTGCCACTCAATCTCTGGTATGGTAGCCTGTGTCAGTGCTTCATTCCTGCGGCCTCCTGCCAGTaGGCAAAGCAGGCGGGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: WLLPLNLWYGSLCQCFIPAASCQ*AKQAGP Trigger: GGGACCCGCCTGCTTTGCCAACTGGCAGGAGGCCGC...AGGAATGAAGCACTGACACAGGCTACCATACCAGAGATTGAGTGGCAGCAGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
||
| CDS-3UTR CAA 90 bp | GAGTCCCTCCTATCAATCATGCTCCACTGTCCTCAAGGCCCTGGCAGCTCCATTTCATCCTGGTCGCTGTaGTTCCTGATCAAGATGCGT | + |
|
Preference number: 5 (lower is better) Translates to: ESLLSIMLHCPQGPGSSISSWSL*FLIKMR Trigger: ACGCATCTTGATCAGGAACAACAGCGACCAGGATGA...AATGGAGCTGCCAGGGCCTTGAGGACAGTGGAGCATGATTGATAGGAGGGACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
||
| CDS-3UTR CAA 90 bp | CCTCTAGTCAGATTCTTGATCCCAGAAAGTCAGGTTTGCAAGCTTCCGTGGACTCGCACGAAGAAGTCTTaGAGGACTGGGGCAAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: PLVRFLIPESQVCKLPWTRTKKS*RTGAKA Trigger: GGCCTTTGCCCCAGTCCTCAAAGACTTCTTCGTGCG...AGTCCACGGAAGCTTGCAAACCTGACTTTCTGGGATCAAGAATCTGACTAGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
||
| CDS CCA 90 bp | TTCTCTAACCTACGGCTCAGCTCTGCCTCTGTCTCCACTTCATCCTaGTCGCTGTTGTTCCTGATCAAGATGCGTCCAGAGAAGAGAGAT | + |
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Preference number: 5 (lower is better) Translates to: FSNLRLSSASVSTSS*SLLFLIKMRPEKRD Trigger: ATCTCTCTTCTCTGGACGCATCTTGATCAGGAACAACAGCGACCAGGATGAAGTGGAGACAGAGGCAGAGCTGAGCCGTAGGTTAGAGAA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
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| CDS-3UTR CAA 90 bp | GTGTTTGTTTTTAAAGCACATTTACAGAGCAACCCTGCCTATATCTATCTAGTTCCTCCGTGGCGTCGCTaGTCAGCACGTCCCCACCAG | + |
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Preference number: 5 (lower is better) Translates to: VFVFKAHLQSNPAYIYLVPPWRR*SARPHQ Trigger: CTGGTGGGGACGTGCTGACAAGCGACGCCACGGAGG...AACTAGATAGATATAGGCAGGGTTGCTCTGTAAATGTGCTTTAAAAACAAACAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
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| CDS-3UTR CAA 90 bp | AACCCTGCCTATATCTATCTAGTTTGGAAGCATTCTATCTCTTTAAGAGAGTCCCGCACGAAGAAGTCTTaGAGGACTGGGGCAAAGGCC | + |
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Preference number: 5 (lower is better) Translates to: NPAYIYLVWKHSISLRESRTKKS*RTGAKA Trigger: GGCCTTTGCCCCAGTCCTCAAAGACTTCTTCGTGCG...GGACTCTCTTAAAGAGATAGAATGCTTCCAAACTAGATAGATATAGGCAGGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
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| CDS-3UTR CAA 90 bp | CCTGCCTATATCTATCTAGTTTGGAAGCATTCTATCTCTTTAAGAGAGTCCCTCTCATCCTGGTCGCTGTaGTTCCTGATCAAGATGCGT | + |
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Preference number: 5 (lower is better) Translates to: PAYIYLVWKHSISLRESLSSWSL*FLIKMR Trigger: ACGCATCTTGATCAGGAACAACAGCGACCAGGATGA...GAGGGACTCTCTTAAAGAGATAGAATGCTTCCAAACTAGATAGATATAGGCAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
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| CDS CAA 90 bp | CCGTTTCGGCCCCGCTCCCGGCCGACATCCCGGTCTACTCGGTACTaGCGACGGCGCAGAGGCTCGGTGATGCTGCGCCGCGCAGGCTCA | + |
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Preference number: 6 (lower is better) Translates to: PFRPRSRPTSRSTRY*RRRRGSVMLRRAGS Trigger: TGAGCCTGCGCGGCGCAGCATCACCGAGCCTCTGCGCCGTCGCAAGTACCGAGTAGACCGGGATGTCGGCCGGGAGCGGGGCCGAAACGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
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| CDS CAA 90 bp | GGTTGCAGGAAGCTGCGGTCCAGGAGCTCTGCGGCCTCCTGCCAGTaGGCAAAGCAGGCGGGTCCCAGACGCTGGATCTCCTCCGTGGCG | + |
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Preference number: 6 (lower is better) Translates to: GCRKLRSRSSAASCQ*AKQAGPRRWISSVA Trigger: CGCCACGGAGGAGATCCAGCGTCTGGGACCCGCCTGCTTTGCCAACTGGCAGGAGGCCGCAGAGCTCCTGGACCGCAGCTTCCTGCAACC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
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| CDS GCA 72 bp | ATGCTGCGCCGCGCAGGCTCATCCAAATCCTCCGGTTaGAGGAAGCTGCGGTCCAGGAGCTCTGCGGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: MLRRAGSSKSSG*RKLRSRSSAAS Trigger: GGAGGCCGCAGAGCTCCTGGACCGCAGCTTCCTGCAACCGGAGGATTTGGATGAGCCTGCGCGGCGCAGCAT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
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| CDS CAA 72 bp | AAGCTGCGGTCCAGGAGCTCTGCGGCCTCCTGCCAGTaGGCAAAGCAGGCGGGTCCCAGACGCTGGATCTCC | + |
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Preference number: 6 (lower is better) Translates to: KLRSRSSAASCQ*AKQAGPRRWIS Trigger: GGAGATCCAGCGTCTGGGACCCGCCTGCTTTGCCAACTGGCAGGAGGCCGCAGAGCTCCTGGACCGCAGCTT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
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| CDS CAA 90 bp | AGGCTCGGTGATGCTGCGCCGCGCAGGCTCATCCAAATCCTCCGGTaGCAGGAAGCTGCGGTCCAGGAGCTCTGCGGCCTCCTGCCAGTT | + |
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Preference number: 6 (lower is better) Translates to: RLGDAAPRRLIQILR*QEAAVQELCGLLPV Trigger: AACTGGCAGGAGGCCGCAGAGCTCCTGGACCGCAGCTTCCTGCAACCGGAGGATTTGGATGAGCCTGCGCGGCGCAGCATCACCGAGCCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
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| CDS GCA 72 bp | GCGCAGGCTCATCCAAATCCTCCGGTTGCAGGAAGCTaGGGTCCAGGAGCTCTGCGGCCTCCTGCCAGTTGG | + |
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Preference number: 6 (lower is better) Translates to: AQAHPNPPVAGS*GPGALRPPASW Trigger: CCAACTGGCAGGAGGCCGCAGAGCTCCTGGACCGCAGCTTCCTGCAACCGGAGGATTTGGATGAGCCTGCGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
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| CDS CCA 72 bp | TCCTGCCAGTTGGCAAAGCAGGCGGGTCCCAGACGCTaGATCTCCTCCGTGGCGTCGCTTGTCAGCACGTCC | + |
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Preference number: 6 (lower is better) Translates to: SCQLAKQAGPRR*ISSVASLVSTS Trigger: GGACGTGCTGACAAGCGACGCCACGGAGGAGATCCAGCGTCTGGGACCCGCCTGCTTTGCCAACTGGCAGGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
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| CDS GCA 72 bp | AGGGTCCTGGGACACATAGACCAGGGCCAGCTGTGCTaGCCGCAGCACGTAGAACTCGTCAGTGAGCCGCAC | + |
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Preference number: 6 (lower is better) Translates to: RVLGHIDQGQLC*PQHVELVSEPH Trigger: GTGCGGCTCACTGACGAGTTCTACGTGCTGCGGGCAGCACAGCTGGCCCTGGTCTATGTGTCCCAGGACCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
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| CDS TCA 72 bp | TCCCCACCAGGCTTAAGTACCACAACCGCTGGCAGTTaGCGGACAGAGAACTGGCGCCCGAGGTCCCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: SPPGLSTTTAGS*RTENWRPRSLL Trigger: GAGGAGGGACCTCGGGCGCCAGTTCTCTGTCCGTCAACTGCCAGCGGTTGTGGTACTTAAGCCTGGTGGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
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| CDS GCA 72 bp | TGTAGGGTCCTGGGACACATAGACCAGGGCCAGCTGTaGTGCCCGCAGCACGTAGAACTCGTCAGTGAGCCG | + |
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Preference number: 6 (lower is better) Translates to: CRVLGHIDQGQL*CPQHVELVSEP Trigger: CGGCTCACTGACGAGTTCTACGTGCTGCGGGCAGCACAGCTGGCCCTGGTCTATGTGTCCCAGGACCCTACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
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| CDS CCA 72 bp | AAGAAGTCTTTGAGGACTGGGGCAAAGGCCTGGCACTaGGGACAGGCGCCGGCGCCGAAGAACAGCAACACC | + |
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Preference number: 6 (lower is better) Translates to: KKSLRTGAKAWH*GQAPAPKNSNT Trigger: GGTGTTGCTGTTCTTCGGCGCCGGCGCCTGTCCCCAGTGCCAGGCCTTTGCCCCAGTCCTCAAAGACTTCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
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| CDS CCA 72 bp | CAGCACGTCCCCACCAGGCTTAAGTACCACAACCGCTaGCAGTTGACGGACAGAGAACTGGCGCCCGAGGTC | + |
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Preference number: 6 (lower is better) Translates to: QHVPTRLKYHNR*QLTDRELAPEV Trigger: GACCTCGGGCGCCAGTTCTCTGTCCGTCAACTGCCAGCGGTTGTGGTACTTAAGCCTGGTGGGGACGTGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
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| CDS CAA 72 bp | GTCCCCACCAGGCTTAAGTACCACAACCGCTGGCAGTaGACGGACAGAGAACTGGCGCCCGAGGTCCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: VPTRLKYHNRWQ*TDRELAPEVPP Trigger: AGGAGGGACCTCGGGCGCCAGTTCTCTGTCCGTCAACTGCCAGCGGTTGTGGTACTTAAGCCTGGTGGGGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
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| CDS CAA 90 bp | TGTCAGCACGTCCCCACCAGGCTTAAGTACCACAACCGCTGGCAGTaGACGGACAGAGAACTGGCGCCCGAGGTCCCTCCTCAGTTCATC | + |
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Preference number: 6 (lower is better) Translates to: CQHVPTRLKYHNRWQ*TDRELAPEVPPQFI Trigger: GATGAACTGAGGAGGGACCTCGGGCGCCAGTTCTCTGTCCGTCAACTGCCAGCGGTTGTGGTACTTAAGCCTGGTGGGGACGTGCTGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
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| CDS CAA 90 bp | CAGGAAGAGCCATTTTTCAGGCATGTCCCTGAGGAAGAGGTCCTGTaGCTCCTCTGTAGGGTCCTGGGACACATAGACCAGGGCCAGCTG | + |
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Preference number: 6 (lower is better) Translates to: QEEPFFRHVPEEEVL*LLCRVLGHIDQGQL Trigger: CAGCTGGCCCTGGTCTATGTGTCCCAGGACCCTACAGAGGAGCAACAGGACCTCTTCCTCAGGGACATGCCTGAAAAATGGCTCTTCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
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| CDS CCA 72 bp | GAGAACTGGCGCCCGAGGTCCCTCCTCAGTTCATCATaGAACGGCAGGAAGAGCCATTTTTCAGGCATGTCC | + |
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Preference number: 6 (lower is better) Translates to: ENWRPRSLLSSS*NGRKSHFSGMS Trigger: GGACATGCCTGAAAAATGGCTCTTCCTGCCGTTCCATGATGAACTGAGGAGGGACCTCGGGCGCCAGTTCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
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| CDS CCA 72 bp | CTACGGCTCAGCTCTGCCTCTGTCTCCACTTCATCCTaGTCGCTGTTGTTCCTGATCAAGATGCGTCCAGAG | + |
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Preference number: 6 (lower is better) Translates to: LRLSSASVSTSS*SLLFLIKMRPE Trigger: CTCTGGACGCATCTTGATCAGGAACAACAGCGACCAGGATGAAGTGGAGACAGAGGCAGAGCTGAGCCGTAG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
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| CDS CAA 72 bp | CCATTTTTCAGGCATGTCCCTGAGGAAGAGGTCCTGTaGCTCCTCTGTAGGGTCCTGGGACACATAGACCAG | + |
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Preference number: 6 (lower is better) Translates to: PFFRHVPEEEVL*LLCRVLGHIDQ Trigger: CTGGTCTATGTGTCCCAGGACCCTACAGAGGAGCAACAGGACCTCTTCCTCAGGGACATGCCTGAAAAATGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048243.7 ENSMUST00000163659.3 |
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