Pregenerated sensors for NXN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020844Ensembl transcript IDs: ENSMUST00000021204.4
Found 92 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTTCAGCTGCCTGGGCAGAGCAGAGGAAGTCAGGGTGACTGCAGTTaGCATGCCCAGTGCCCTCACTGCTTTCTAGAGCACAGTTACCTT | + |
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Preference number: 1 (lower is better) Translates to: VQLPGQSRGSQGDCS*HAQCPHCFLEHSYL Trigger: AAGGTAACTGTGCTCTAGAAAGCAGTGAGGGCACTGGGCATGCCAACTGCAGTCACCCTGACTTCCTCTGCTCTGCCCAGGCAGCTGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| 3UTR GCA 90 bp | GGGCAGAGCAGAGGAAGTCAGGGTGACTGCAGTTGGCATGCCCAGTaGCCTCACTGCTTTCTAGAGCACAGTTACCTTTGCAGGTTCCTA | + |
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Preference number: 1 (lower is better) Translates to: GQSRGSQGDCSWHAQ*PHCFLEHSYLCRFL Trigger: TAGGAACCTGCAAAGGTAACTGTGCTCTAGAAAGCAGTGAGGGCACTGGGCATGCCAACTGCAGTCACCCTGACTTCCTCTGCTCTGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| 3UTR TCA 90 bp | TACAGATGTCACAGGAGAGTTCCCTCTGGCTTGGGGTGTGTATACTaGTCCCAGAGTCAGAGTCAGGGCCTCAATCCACGGTCCTTGCTT | + |
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Preference number: 1 (lower is better) Translates to: YRCHRRVPSGLGCVY*SQSQSQGLNPRSLL Trigger: AAGCAAGGACCGTGGATTGAGGCCCTGACTCTGACTCTGGGATCAGTATACACACCCCAAGCCAGAGGGAACTCTCCTGTGACATCTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| 3UTR GCA 90 bp | AGAGGAAGTCAGGGTGACTGCAGTTGGCATGCCCAGTGCCCTCACTaGTTTCTAGAGCACAGTTACCTTTGCAGGTTCCTAGAGGAAAGA | + |
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Preference number: 1 (lower is better) Translates to: RGSQGDCSWHAQCPH*FLEHSYLCRFLEER Trigger: TCTTTCCTCTAGGAACCTGCAAAGGTAACTGTGCTCTAGAAAGCAGTGAGGGCACTGGGCATGCCAACTGCAGTCACCCTGACTTCCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| 3UTR TCA 90 bp | ACAAGGTTCCTTAGAGATATGGAAGTCCCCTGCCCAAGAACCCACTaGTGCGCTGGTTTTCCCTCAGACCAAGAAAGATCACGTCCTTAC | + |
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Preference number: 1 (lower is better) Translates to: TRFLRDMEVPCPRTH*CAGFPSDQERSRPY Trigger: GTAAGGACGTGATCTTTCTTGGTCTGAGGGAAAACCAGCGCATCAGTGGGTTCTTGGGCAGGGGACTTCCATATCTCTAAGGAACCTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| 3UTR CCA 90 bp | GATGCTTTGAAGTCCCTGACACCAGACTGTGACAGACTAAAGTCCTaGAAATCCCTAGGCCAAAGCACAGACCCTAAGAACATGGCTGAT | + |
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Preference number: 1 (lower is better) Translates to: DALKSLTPDCDRLKS*KSLGQSTDPKNMAD Trigger: ATCAGCCATGTTCTTAGGGTCTGTGCTTTGGCCTAGGGATTTCCAGGACTTTAGTCTGTCACAGTCTGGTGTCAGGGACTTCAAAGCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| 3UTR-3UTR TCA 90 bp | GCTGCAGGTGATTGTGGCAGAGAAGCAGCCCACAGAGAAGCCCGGGTAGCTGGGTCAGCTGATGGCCACTaGGGTCATGACCCTTCCTCT | + |
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Preference number: 2 (lower is better) Translates to: AAGDCGREAAHREARVAGSADGH*GHDPSS Trigger: AGAGGAAGGGTCATGACCTCAGTGGCCATCAGCTGA...CCCAGCTACCCGGGCTTCTCTGTGGGCTGCTTCTCTGCCACAATCACCTGCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| 3UTR-3UTR TCA 90 bp | TTAGAGATATGGAAGTCCCCTGCCCAAGAACCCACTGATGCGCTGGTTTTCCCTGACCTGCTGCCACTGTaGGGATGCACACCCATGGGT | + |
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Preference number: 2 (lower is better) Translates to: LEIWKSPAQEPTDALVFPDLLPL*GCTPMG Trigger: ACCCATGGGTGTGCATCCTCACAGTGGCAGCAGGTC...AGGGAAAACCAGCGCATCAGTGGGTTCTTGGGCAGGGGACTTCCATATCTCTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| 3UTR-3UTR CCA 90 bp | CACTGTTGTGGTCAGTTCAGCTGCCTGGGCAGAGCAGAGGAAGTCAGGGTGACTCAGGAGAGTTCCCTCTaGCTTGGGGTGTGTATACTG | + |
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Preference number: 2 (lower is better) Translates to: HCCGQFSCLGRAEEVRVTQESSL*LGVCIL Trigger: CAGTATACACACCCCAAGCCAGAGGGAACTCTCCTG...AGTCACCCTGACTTCCTCTGCTCTGCCCAGGCAGCTGAACTGACCACAACAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| 3UTR-3UTR CCA 90 bp | CGGACCATGAAAGGGGCTGCAGGTGATTGTGGCAGAGAAGCAGCCCACAGAGAAGCAGAAACCTGGGGATaGCCAAGAGTACAGGAGGAA | + |
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Preference number: 2 (lower is better) Translates to: RTMKGAAGDCGREAAHREAETWG*PRVQEE Trigger: TTCCTCCTGTACTCTTGGCCATCCCCAGGTTTCTGC...TTCTCTGTGGGCTGCTTCTCTGCCACAATCACCTGCAGCCCCTTTCATGGTCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| 3UTR-3UTR TCA 90 bp | TTGGCATGCCCAGTGCCCTCACTGCTTTCTAGAGCACAGTTACCTTTGCAGGTTGAAGGTCCTCCATCATaGGCCAGGAGAGGTGGCAGT | + |
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Preference number: 2 (lower is better) Translates to: LACPVPSLLSRAQLPLQVEGPPS*ARRGGS Trigger: ACTGCCACCTCTCCTGGCTCATGATGGAGGACCTTC...AACCTGCAAAGGTAACTGTGCTCTAGAAAGCAGTGAGGGCACTGGGCATGCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| 3UTR-3UTR TCA 90 bp | AAGAACATGGCTGATGTTTCCACTGTTGTGGTCAGTTCAGCTGCCTGGGCAGAGTGGCCACTGAGGTCATaGCCCTTCCTCTGTAACTCC | + |
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Preference number: 2 (lower is better) Translates to: KNMADVSTVVVSSAAWAEWPLRS*PFLCNS Trigger: GGAGTTACAGAGGAAGGGTCATGACCTCAGTGGCCA...CTCTGCCCAGGCAGCTGAACTGACCACAACAGTGGAAACATCAGCCATGTTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| 3UTR-3UTR GCA 90 bp | AAACACCCACAAGGTTCCTTAGAGATATGGAAGTCCCCTGCCCAAGAACCCACTTCCACGGTCCTTGCTTaGTCACTCTGCAGAAGACCC | + |
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Preference number: 2 (lower is better) Translates to: KHPQGSLEIWKSPAQEPTSTVLA*SLCRRP Trigger: GGGTCTTCTGCAGAGTGAGCAAGCAAGGACCGTGGA...AGTGGGTTCTTGGGCAGGGGACTTCCATATCTCTAAGGAACCTTGTGGGTGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| 3UTR-3UTR CCA 90 bp | AAGAACATGGCTGATGTTTCCACTGTTGTGGTCAGTTCAGCTGCCTGGGCAGAGGGTTCCTTAGAGATATaGAAGTCCCCTGCCCAAGAA | + |
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Preference number: 2 (lower is better) Translates to: KNMADVSTVVVSSAAWAEGSLEI*KSPAQE Trigger: TTCTTGGGCAGGGGACTTCCATATCTCTAAGGAACC...CTCTGCCCAGGCAGCTGAACTGACCACAACAGTGGAAACATCAGCCATGTTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| 3UTR CAA 90 bp | TTGGCATGCCCAGTGCCCTCACTGCTTTCTAGAGCACAGTTACCTTaGCAGGTTCCTAGAGGAAAGAAAACCCTCGTCTCTTTTTGGATC | + |
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Preference number: 2 (lower is better) Translates to: LACPVPSLLSRAQLP*QVPRGKKTLVSFWI Trigger: GATCCAAAAAGAGACGAGGGTTTTCTTTCCTCTAGGAACCTGCAAAGGTAACTGTGCTCTAGAAAGCAGTGAGGGCACTGGGCATGCCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| 3UTR-3UTR CCA 90 bp | GAGGACAACTGCGTTTTCCAAAATAAATGGTTTGGGCTGGTAAAGTGTTGGGTTAGTCTCGGGGCTAGCTaGTCATGCCATCCTCACGGA | + |
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Preference number: 2 (lower is better) Translates to: EDNCVFQNKWFGLVKCWVSLGAS*SCHPHG Trigger: TCCGTGAGGATGGCATGACCAGCTAGCCCCGAGACT...AACCCAACACTTTACCAGCCCAAACCATTTATTTTGGAAAACGCAGTTGTCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| 3UTR-3UTR CCA 90 bp | GAGGACAACTGCGTTTTCCAAAATAAATGGTTTGGGCTGGTAAAGTGTTGGGTTATGTTTCCACTGTTGTaGTCAGTTCAGCTGCCTGGG | + |
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Preference number: 2 (lower is better) Translates to: EDNCVFQNKWFGLVKCWVMFPLL*SVQLPG Trigger: CCCAGGCAGCTGAACTGACCACAACAGTGGAAACAT...AACCCAACACTTTACCAGCCCAAACCATTTATTTTGGAAAACGCAGTTGTCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| 3UTR-3UTR GCA 90 bp | GAGGACAACTGCGTTTTCCAAAATAAATGGTTTGGGCTGGTAAAGTGTTGGGTTGAGCACAGTTACCTTTaGAGGTTCCTAGAGGAAAGA | + |
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Preference number: 2 (lower is better) Translates to: EDNCVFQNKWFGLVKCWVEHSYL*RFLEER Trigger: TCTTTCCTCTAGGAACCTGCAAAGGTAACTGTGCTC...AACCCAACACTTTACCAGCCCAAACCATTTATTTTGGAAAACGCAGTTGTCCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| 3UTR TCA 72 bp | CTCACTCTGCAGAAGACCCGGGAAGGTCCTCCATCATaGGCCAGGAGAGGTGGCAGTCTCGGGGCTAGCTGG | + |
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Preference number: 3 (lower is better) Translates to: LTLQKTREGPPS*ARRGGSLGASW Trigger: CCAGCTAGCCCCGAGACTGCCACCTCTCCTGGCTCATGATGGAGGACCTTCCCGGGTCTTCTGCAGAGTGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| 3UTR GCA 72 bp | GCCAGGAGAGGTGGCAGTCTCGGGGCTAGCTGGTCATaGCATCCTCACGGATCCCCAAGCCATCTCCAAACA | + |
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Preference number: 3 (lower is better) Translates to: ARRGGSLGASWS*HPHGSPSHLQT Trigger: TGTTTGGAGATGGCTTGGGGATCCGTGAGGATGGCATGACCAGCTAGCCCCGAGACTGCCACCTCTCCTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| 3UTR GCA 72 bp | GATCCCCAAGCCATCTCCAAACACCGTGGGACCTGCTaGCACTGTGAGGATGCACACCCATGGGTGCTAGCT | + |
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Preference number: 3 (lower is better) Translates to: DPQAISKHRGTC*HCEDAHPWVLA Trigger: AGCTAGCACCCATGGGTGTGCATCCTCACAGTGGCAGCAGGTCCCACGGTGTTTGGAGATGGCTTGGGGATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| 3UTR GCA 72 bp | ACGGATCCCCAAGCCATCTCCAAACACCGTGGGACCTaGTGCCACTGTGAGGATGCACACCCATGGGTGCTA | + |
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Preference number: 3 (lower is better) Translates to: TDPQAISKHRGT*CHCEDAHPWVL Trigger: TAGCACCCATGGGTGTGCATCCTCACAGTGGCAGCAGGTCCCACGGTGTTTGGAGATGGCTTGGGGATCCGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| 3UTR GCA 72 bp | CCCAGAGTCAGAGTCAGGGCCTCAATCCACGGTCCTTaGTTGCTCACTCTGCAGAAGACCCGGGAAGGTCCT | + |
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Preference number: 3 (lower is better) Translates to: PRVRVRASIHGP*LLTLQKTREGP Trigger: AGGACCTTCCCGGGTCTTCTGCAGAGTGAGCAAGCAAGGACCGTGGATTGAGGCCCTGACTCTGACTCTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| 3UTR-3UTR CAA 90 bp | GCTGCAGGTGATTGTGGCAGAGAAGCAGCCCACAGAGAAGCCCGGGTAGCTGGGCTCAATCCACGGTCCTaGCTTGCTCACTCTGCAGAA | + |
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Preference number: 3 (lower is better) Translates to: AAGDCGREAAHREARVAGLNPRS*LAHSAE Trigger: TTCTGCAGAGTGAGCAAGCAAGGACCGTGGATTGAG...CCCAGCTACCCGGGCTTCTCTGTGGGCTGCTTCTCTGCCACAATCACCTGCAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| 3UTR GCA 72 bp | TCAGGGCCTCAATCCACGGTCCTTGCTTGCTCACTCTaGAGAAGACCCGGGAAGGTCCTCCATCATGAGCCA | + |
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Preference number: 3 (lower is better) Translates to: SGPQSTVLACSL*RRPGKVLHHEP Trigger: TGGCTCATGATGGAGGACCTTCCCGGGTCTTCTGCAGAGTGAGCAAGCAAGGACCGTGGATTGAGGCCCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| 3UTR CCA 72 bp | TGGCAGAGAAGCAGCCCACAGAGAAGCCCGGGTAGCTaGGCAACACTTCTCTGGGAACTCAGGGCTGAATCT | + |
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Preference number: 3 (lower is better) Translates to: WQRSSPQRSPGS*ATLLWELRAES Trigger: AGATTCAGCCCTGAGTTCCCAGAGAAGTGTTGCCCAGCTACCCGGGCTTCTCTGTGGGCTGCTTCTCTGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| 3UTR-3UTR CAA 90 bp | GGGGCTAGCTGGTCATGCCATCCTCACGGATCCCCAAGCCATCTCCAAACACCGACAGAGGTTGGACACTaGGATTGTGTGATTCAGGAC | + |
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Preference number: 3 (lower is better) Translates to: GASWSCHPHGSPSHLQTPTEVGH*DCVIQD Trigger: GTCCTGAATCACACAATCCAAGTGTCCAACCTCTGT...CGGTGTTTGGAGATGGCTTGGGGATCCGTGAGGATGGCATGACCAGCTAGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| 3UTR TCA 72 bp | AAGCAAATTCGCCGACAGCTCTCAGCTGATGGCCACTaGGGTCATGACCCTTCCTCTGTAACTCCCACGGGT | + |
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Preference number: 3 (lower is better) Translates to: KQIRRQLSADGH*GHDPSSVTPTG Trigger: ACCCGTGGGAGTTACAGAGGAAGGGTCATGACCTCAGTGGCCATCAGCTGAGAGCTGTCGGCGAATTTGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| 3UTR GCA 72 bp | CAGGGTGACTGCAGTTGGCATGCCCAGTGCCCTCACTaGTTTCTAGAGCACAGTTACCTTTGCAGGTTCCTA | + |
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Preference number: 3 (lower is better) Translates to: QGDCSWHAQCPH*FLEHSYLCRFL Trigger: TAGGAACCTGCAAAGGTAACTGTGCTCTAGAAAGCAGTGAGGGCACTGGGCATGCCAACTGCAGTCACCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| 3UTR GCA 72 bp | AGAGGAAGTCAGGGTGACTGCAGTTGGCATGCCCAGTaGCCTCACTGCTTTCTAGAGCACAGTTACCTTTGC | + |
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Preference number: 3 (lower is better) Translates to: RGSQGDCSWHAQ*PHCFLEHSYLC Trigger: GCAAAGGTAACTGTGCTCTAGAAAGCAGTGAGGGCACTGGGCATGCCAACTGCAGTCACCCTGACTTCCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| 3UTR CCA 72 bp | ACGGGTACAGATGTCACAGGAGAGTTCCCTCTGGCTTaGGGTGTGTATACTGATCCCAGAGTCAGAGTCAGG | + |
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Preference number: 3 (lower is better) Translates to: TGTDVTGEFPLA*GVYTDPRVRVR Trigger: CCTGACTCTGACTCTGGGATCAGTATACACACCCCAAGCCAGAGGGAACTCTCCTGTGACATCTGTACCCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| 3UTR CCA 72 bp | CAGACCCTAAGAACATGGCTGATGTTTCCACTGTTGTaGTCAGTTCAGCTGCCTGGGCAGAGCAGAGGAAGT | + |
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Preference number: 3 (lower is better) Translates to: QTLRTWLMFPLL*SVQLPGQSRGS Trigger: ACTTCCTCTGCTCTGCCCAGGCAGCTGAACTGACCACAACAGTGGAAACATCAGCCATGTTCTTAGGGTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| 3UTR CCA 72 bp | TATGGAAGTCCCCTGCCCAAGAACCCACTGATGCGCTaGTTTTCCCTCAGACCAAGAAAGATCACGTCCTTA | + |
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Preference number: 3 (lower is better) Translates to: YGSPLPKNPLMR*FSLRPRKITSL Trigger: TAAGGACGTGATCTTTCTTGGTCTGAGGGAAAACCAGCGCATCAGTGGGTTCTTGGGCAGGGGACTTCCATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| 3UTR CCA 72 bp | CACCAAAACAAACACCCACAAGGTTCCTTAGAGATATaGAAGTCCCCTGCCCAAGAACCCACTGATGCGCTG | + |
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Preference number: 3 (lower is better) Translates to: HQNKHPQGSLEI*KSPAQEPTDAL Trigger: CAGCGCATCAGTGGGTTCTTGGGCAGGGGACTTCCATATCTCTAAGGAACCTTGTGGGTGTTTGTTTTGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| 3UTR TCA 72 bp | CTTAGAGATATGGAAGTCCCCTGCCCAAGAACCCACTaGTGCGCTGGTTTTCCCTCAGACCAAGAAAGATCA | + |
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Preference number: 3 (lower is better) Translates to: LRDMEVPCPRTH*CAGFPSDQERS Trigger: TGATCTTTCTTGGTCTGAGGGAAAACCAGCGCATCAGTGGGTTCTTGGGCAGGGGACTTCCATATCTCTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| 3UTR CCA 72 bp | AAGTCCCTGACACCAGACTGTGACAGACTAAAGTCCTaGAAATCCCTAGGCCAAAGCACAGACCCTAAGAAC | + |
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Preference number: 3 (lower is better) Translates to: KSLTPDCDRLKS*KSLGQSTDPKN Trigger: GTTCTTAGGGTCTGTGCTTTGGCCTAGGGATTTCCAGGACTTTAGTCTGTCACAGTCTGGTGTCAGGGACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| 3UTR-3UTR CAA 90 bp | AGTTACCTTTGCAGGTTCCTAGAGGAAAGAAAACCCTCGTCTCTTTTTGGATCCATCCACGGTCCTTGCTaGCTCACTCTGCAGAAGACC | + |
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Preference number: 3 (lower is better) Translates to: SYLCRFLEERKPSSLFGSIHGPC*LTLQKT Trigger: GGTCTTCTGCAGAGTGAGCAAGCAAGGACCGTGGAT...GGATCCAAAAAGAGACGAGGGTTTTCTTTCCTCTAGGAACCTGCAAAGGTAACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| 3UTR CCA 72 bp | GTTTTCCAAAATAAATGGTTTGGGCTGGTAAAGTGTTaGGTTGAGCTGAGGGTGAGGCCCAGATGCTTTGAA | + |
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Preference number: 3 (lower is better) Translates to: VFQNKWFGLVKC*VELRVRPRCFE Trigger: TTCAAAGCATCTGGGCCTCACCCTCAGCTCAACCCAACACTTTACCAGCCCAAACCATTTATTTTGGAAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| 3UTR TCA 72 bp | AATCTTGGGAAGATGGCTAAGGGGGAAATCCATTTCTaGAATCCCAAGATTTCGGGAGGTTTTTGTATGAGC | + |
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Preference number: 3 (lower is better) Translates to: NLGKMAKGEIHF*NPKISGGFCMS Trigger: GCTCATACAAAAACCTCCCGAAATCTTGGGATTTCAGAAATGGATTTCCCCCTTAGCCATCTTCCCAAGATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| CDS-3UTR GCA 90 bp | GGGGCTAGCTGGTCATGCCATCCTCACGGATCCCCAAGCCATCTCCAAACACCGACCTCCACCCGACCCTaGCGAGTGATCACCTCCCCC | + |
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Preference number: 4 (lower is better) Translates to: GASWSCHPHGSPSHLQTPTSTRP*RVITSP Trigger: GGGGGAGGTGATCACTCGGCAGGGTCGGGTGGAGGT...CGGTGTTTGGAGATGGCTTGGGGATCCGTGAGGATGGCATGACCAGCTAGCCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| CDS-3UTR GCA 90 bp | CACTGTTGTGGTCAGTTCAGCTGCCTGGGCAGAGCAGAGGAAGTCAGGGTGACTCGGGCGCCCAGCGAATaGACGTCCACCTCCTCGCCA | + |
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Preference number: 4 (lower is better) Translates to: HCCGQFSCLGRAEEVRVTRAPSE*TSTSSP Trigger: TGGCGAGGAGGTGGACGTGCATTCGCTGGGCGCCCG...AGTCACCCTGACTTCCTCTGCTCTGCCCAGGCAGCTGAACTGACCACAACAGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| CDS-3UTR GCA 90 bp | CGGACCATGAAAGGGGCTGCAGGTGATTGTGGCAGAGAAGCAGCCCACAGAGAAGTGATCACCTCCCCCTaGGGGTCCAGCACGATGAGC | + |
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Preference number: 4 (lower is better) Translates to: RTMKGAAGDCGREAAHREVITSP*GSSTMS Trigger: GCTCATCGTGCTGGACCCGCAGGGGGAGGTGATCAC...TTCTCTGTGGGCTGCTTCTCTGCCACAATCACCTGCAGCCCCTTTCATGGTCCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| CDS-3UTR CCA 90 bp | CCACAGAGAAGCCCGGGTAGCTGGGCAACACTTCTCTGGGAACTCAGGGCTGAACACTGCCGCTGGTCTTaGTCCGAAGACACGAAGACG | + |
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Preference number: 4 (lower is better) Translates to: PQRSPGSWATLLWELRAEHCRWS*SEDTKT Trigger: CGTCTTCGTGTCTTCGGACCAAGACCAGCGGCAGTG...TTCAGCCCTGAGTTCCCAGAGAAGTGTTGCCCAGCTACCCGGGCTTCTCTGTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| CDS-3UTR CCA 90 bp | AGGGCCTCAATCCACGGTCCTTGCTTGCTCACTCTGCAGAAGACCCGGGAAGGTGCTGGATCAGCTGTTTaGCTGCCTCGGACTCTCCGT | + |
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Preference number: 4 (lower is better) Translates to: RASIHGPCLLTLQKTREGAGSAV*LPRTLR Trigger: ACGGAGAGTCCGAGGCAGCCAAACAGCTGATCCAGC...ACCTTCCCGGGTCTTCTGCAGAGTGAGCAAGCAAGGACCGTGGATTGAGGCCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| CDS-3UTR TCA 90 bp | CACTGTTGTGGTCAGTTCAGCTGCCTGGGCAGAGCAGAGGAAGTCAGGGTGACTGTACTTGGCCCGGGCTaGCATGTCCAGAATGGTGAG | + |
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Preference number: 4 (lower is better) Translates to: HCCGQFSCLGRAEEVRVTVLGPG*HVQNGE Trigger: CTCACCATTCTGGACATGTCAGCCCGGGCCAAGTAC...AGTCACCCTGACTTCCTCTGCTCTGCCCAGGCAGCTGAACTGACCACAACAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| CDS-3UTR GCA 90 bp | ACTGATGCGCTGGTTTTCCCTCAGACCAAGAAAGATCACGTCCTTACAAAGCAAGCCCCAGCAGCGCGATaGCGCGGGCGCCCAGCGAAT | + |
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Preference number: 4 (lower is better) Translates to: TDALVFPQTKKDHVLTKQAPAAR*RGRPAN Trigger: ATTCGCTGGGCGCCCGCGGCATCGCGCTGCTGGGGC...TTGCTTTGTAAGGACGTGATCTTTCTTGGTCTGAGGGAAAACCAGCGCATCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| CDS-3UTR GCA 90 bp | CACTGTTGTGGTCAGTTCAGCTGCCTGGGCAGAGCAGAGGAAGTCAGGGTGACTACGAAGTCCTGCCACTaGCGCTGGTCTTGGTCCGAA | + |
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Preference number: 4 (lower is better) Translates to: HCCGQFSCLGRAEEVRVTTKSCH*RWSWSE Trigger: TTCGGACCAAGACCAGCGGCAGTGGCAGGACTTCGT...AGTCACCCTGACTTCCTCTGCTCTGCCCAGGCAGCTGAACTGACCACAACAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| CDS-3UTR GCA 90 bp | TTGGCATGCCCAGTGCCCTCACTGCTTTCTAGAGCACAGTTACCTTTGCAGGTTACCCCTCCAGGCTGCTaGTCTCCAGCGACTGCCCGT | + |
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Preference number: 4 (lower is better) Translates to: LACPVPSLLSRAQLPLQVTPPGC*SPATAR Trigger: ACGGGCAGTCGCTGGAGAGCAGCAGCCTGGAGGGGT...AACCTGCAAAGGTAACTGTGCTCTAGAAAGCAGTGAGGGCACTGGGCATGCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| 3UTR CAA 72 bp | AGAGTCAGAGTCAGGGCCTCAATCCACGGTCCTTGCTaGCTCACTCTGCAGAAGACCCGGGAAGGTCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: RVRVRASIHGPC*LTLQKTREGPP Trigger: TGGAGGACCTTCCCGGGTCTTCTGCAGAGTGAGCAAGCAAGGACCGTGGATTGAGGCCCTGACTCTGACTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| CDS-3UTR TCA 90 bp | AAACACCCACAAGGTTCCTTAGAGATATGGAAGTCCCCTGCCCAAGAACCCACTGGCAGGGGCCCTCGTTaGGCTGCACAGCGTTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: KHPQGSLEIWKSPAQEPTGRGPR*AAQRWS Trigger: ACTCCAACGCTGTGCAGCTCAACGAGGGCCCCTGCC...AGTGGGTTCTTGGGCAGGGGACTTCCATATCTCTAAGGAACCTTGTGGGTGTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| CDS-3UTR CCA 90 bp | CACTGTTGTGGTCAGTTCAGCTGCCTGGGCAGAGCAGAGGAAGTCAGGGTGACTAAGGCTTCGGCAGGGTaGACACCAGTGTGCAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: HCCGQFSCLGRAEEVRVTKASAG*TPVCRE Trigger: TTCTCTGCACACTGGTGTCCACCCTGCCGAAGCCTT...AGTCACCCTGACTTCCTCTGCTCTGCCCAGGCAGCTGAACTGACCACAACAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| CDS-3UTR GCA 90 bp | TTAGAGATATGGAAGTCCCCTGCCCAAGAACCCACTGATGCGCTGGTTTTCCCTGATCAGCTGTTTGGCTaGCTCGGACTCTCCGTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: LEIWKSPAQEPTDALVFPDQLFG*LGLSVV Trigger: GACGACGGAGAGTCCGAGGCAGCCAAACAGCTGATC...AGGGAAAACCAGCGCATCAGTGGGTTCTTGGGCAGGGGACTTCCATATCTCTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| CDS-3UTR CCA 90 bp | CGGACCATGAAAGGGGCTGCAGGTGATTGTGGCAGAGAAGCAGCCCACAGAGAACAACCTTCCCTGTGGTaGCGTCTAGGAATATTAGCG | + |
|
Preference number: 4 (lower is better) Translates to: RTMKGAAGDCGREAAHREQPSLW*RLGILA Trigger: CGCTAATATTCCTAGACGCCACCACAGGGAAGGTTG...TTCTCTGTGGGCTGCTTCTCTGCCACAATCACCTGCAGCCCCTTTCATGGTCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| CDS-3UTR CCA 90 bp | AGGGCCTCAATCCACGGTCCTTGCTTGCTCACTCTGCAGAAGACCCGGGAAGGTAGTCTCCACAATGGCTaGGGTGATCTCTTCTACATC | + |
|
Preference number: 4 (lower is better) Translates to: RASIHGPCLLTLQKTREGSLHNG*GDLFYI Trigger: GATGTAGAAGAGATCACCCCAGCCATTGTGGAGACT...ACCTTCCCGGGTCTTCTGCAGAGTGAGCAAGCAAGGACCGTGGATTGAGGCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| 3UTR CAA 72 bp | GCACAGACCCTAAGAACATGGCTGATGTTTCCACTGTaGTGGTCAGTTCAGCTGCCTGGGCAGAGCAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: AQTLRTWLMFPL*WSVQLPGQSRG Trigger: TCCTCTGCTCTGCCCAGGCAGCTGAACTGACCACAACAGTGGAAACATCAGCCATGTTCTTAGGGTCTGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| CDS-3UTR TCA 90 bp | ATGCGCTGGTTTTCCCTCAGACCAAGAAAGATCACGTCCTTACAAAGCAAATTCGCGGGTCCAGCACGATaGGCGTGGGGATGCCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: MRWFSLRPRKITSLQSKFAGPAR*AWGCLG Trigger: TCCAAGGCATCCCCACGCTCATCGTGCTGGACCCGC...GAATTTGCTTTGTAAGGACGTGATCTTTCTTGGTCTGAGGGAAAACCAGCGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| CDS-3UTR GCA 90 bp | ATGCGCTGGTTTTCCCTCAGACCAAGAAAGATCACGTCCTTACAAAGCAAATTCAGGGGGCGCTCAGGCTaGACCCGAAGTAGAGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: MRWFSLRPRKITSLQSKFRGRSG*TRSRAP Trigger: TGGGGCTCTACTTCGGGTGCAGCCTGAGCGCCCCCT...GAATTTGCTTTGTAAGGACGTGATCTTTCTTGGTCTGAGGGAAAACCAGCGCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| CDS-3UTR GCA 90 bp | CACTGCTTTCTAGAGCACAGTTACCTTTGCAGGTTCCTAGAGGAAAGAAAACCCTCCCGCACGAAGTCCTaGCACTGCCGCTGGTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: HCFLEHSYLCRFLEERKPSRTKS*HCRWSW Trigger: CCAAGACCAGCGGCAGTGGCAGGACTTCGTGCGGGA...GGGTTTTCTTTCCTCTAGGAACCTGCAAAGGTAACTGTGCTCTAGAAAGCAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| CDS-3UTR CCA 90 bp | TTAGAGATATGGAAGTCCCCTGCCCAAGAACCCACTGATGCGCTGGTTTTCCCTCATCCATCACGTACTTaGCCCGGGCTGACATGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LEIWKSPAQEPTDALVFPHPSRT*PGLTCP Trigger: TGGACATGTCAGCCCGGGCCAAGTACGTGATGGATG...AGGGAAAACCAGCGCATCAGTGGGTTCTTGGGCAGGGGACTTCCATATCTCTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| CDS-3UTR GCA 90 bp | ACTGATGCGCTGGTTTTCCCTCAGACCAAGAAAGATCACGTCCTTACAAAGCAAGGGCCCTCGTTGAGCTaGACAGCGTTGGAGTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: TDALVFPQTKKDHVLTKQGPSLS*TALESE Trigger: CTCTGACTCCAACGCTGTGCAGCTCAACGAGGGCCC...TTGCTTTGTAAGGACGTGATCTTTCTTGGTCTGAGGGAAAACCAGCGCATCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| CDS-3UTR CCA 90 bp | ACTGATGCGCTGGTTTTCCCTCAGACCAAGAAAGATCACGTCCTTACAAAGCAATCCTGCCACTGCCGCTaGTCTTGGTCCGAAGACACG | + |
|
Preference number: 4 (lower is better) Translates to: TDALVFPQTKKDHVLTKQSCHCR*SWSEDT Trigger: CGTGTCTTCGGACCAAGACCAGCGGCAGTGGCAGGA...TTGCTTTGTAAGGACGTGATCTTTCTTGGTCTGAGGGAAAACCAGCGCATCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| CDS-3UTR GCA 90 bp | AAGAACATGGCTGATGTTTCCACTGTTGTGGTCAGTTCAGCTGCCTGGGCAGAGCTGCTCTCCAGCGACTaGCCGTTATTTCTAAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: KNMADVSTVVVSSAAWAELLSSD*PLFLSK Trigger: CTTGCTTAGAAATAACGGGCAGTCGCTGGAGAGCAG...CTCTGCCCAGGCAGCTGAACTGACCACAACAGTGGAAACATCAGCCATGTTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| 3UTR CAA 72 bp | CCAGTGCCCTCACTGCTTTCTAGAGCACAGTTACCTTaGCAGGTTCCTAGAGGAAAGAAAACCCTCGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PVPSLLSRAQLP*QVPRGKKTLVS Trigger: AGAGACGAGGGTTTTCTTTCCTCTAGGAACCTGCAAAGGTAACTGTGCTCTAGAAAGCAGTGAGGGCACTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| CDS-3UTR TCA 90 bp | ATTACAAGCCAACAATCCAATTCAGCAAGGAACAGCAGTGTCAATAGCTTGTTGTTCCATACAGTCGGTTaGGACGAGACCGCCGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: ITSQQSNSARNSSVNSLLFHTVG*DETAGP Trigger: AGGCCCGGCGGTCTCGTCTCAACCGACTGTATGGAA...CAACAAGCTATTGACACTGCTGTTCCTTGCTGAATTGGATTGTTGGCTTGTAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| CDS-3UTR CCA 90 bp | TTAGAGATATGGAAGTCCCCTGCCCAAGAACCCACTGATGCGCTGGTTTTCCCTACACAACCTTCCCTGTaGTGGCGTCTAGGAATATTA | + |
|
Preference number: 4 (lower is better) Translates to: LEIWKSPAQEPTDALVFPTQPSL*WRLGIL Trigger: TAATATTCCTAGACGCCACCACAGGGAAGGTTGTGT...AGGGAAAACCAGCGCATCAGTGGGTTCTTGGGCAGGGGACTTCCATATCTCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| CDS-3UTR GCA 90 bp | ATTACAAGCCAACAATCCAATTCAGCAAGGAACAGCAGTGTCAATAGCTTGTTGCCAGGAGCCCATTCCTaGACACAACCTTCCCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ITSQQSNSARNSSVNSLLPGAHS*TQPSLW Trigger: CCACAGGGAAGGTTGTGTGCAGGAATGGGCTCCTGG...CAACAAGCTATTGACACTGCTGTTCCTTGCTGAATTGGATTGTTGGCTTGTAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| CDS-3UTR TCA 90 bp | GAGGACAACTGCGTTTTCCAAAATAAATGGTTTGGGCTGGTAAAGTGTTGGGTTAGATGGGCTCAGGCTTaGGTTTTTCTGCTAGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: EDNCVFQNKWFGLVKCWVRWAQA*VFLLGS Trigger: ACTTCCTAGCAGAAAAACTCAAGCCTGAGCCCATCT...AACCCAACACTTTACCAGCCCAAACCATTTATTTTGGAAAACGCAGTTGTCCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| 3UTR CAA 72 bp | AATCCATTTCTGAAATCCCAAGATTTCGGGAGGTTTTaGTATGAGCAGAAACCTGGGGATGGCCAAGAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: NPFLKSQDFGRF*YEQKPGDGQEY Trigger: GTACTCTTGGCCATCCCCAGGTTTCTGCTCATACAAAAACCTCCCGAAATCTTGGGATTTCAGAAATGGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| CDS-3UTR TCA 90 bp | GAGGACAACTGCGTTTTCCAAAATAAATGGTTTGGGCTGGTAAAGTGTTGGGTTTTTGAAAGACTCCTCTaGCCTGTCTGCACTAACGAA | + |
|
Preference number: 4 (lower is better) Translates to: EDNCVFQNKWFGLVKCWVFERLL*PVCTNE Trigger: TTCGTTAGTGCAGACAGGTCAGAGGAGTCTTTCAAA...AACCCAACACTTTACCAGCCCAAACCATTTATTTTGGAAAACGCAGTTGTCCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| CDS CCA 90 bp | AGCCATGGCATGTCCCGCACGAAGTCCTGCCACTGCCGCTGGTCTTaGTCCGAAGACACGAAGACGATCTCCAGGCGGTGCCGGGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SHGMSRTKSCHCRWS*SEDTKTISRRCRGS Trigger: AGAGCCCCGGCACCGCCTGGAGATCGTCTTCGTGTCTTCGGACCAAGACCAGCGGCAGTGGCAGGACTTCGTGCGGGACATGCCATGGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| CDS-3UTR CAA 90 bp | TCACGGATCCCCAAGCCATCTCCAAACACCGTGGGACCTGCTGCCACTGTGAGGCCGCCCGTCACCAGCTaGTCTCCCAGCAGCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SRIPKPSPNTVGPAATVRPPVTS*SPSSSS Trigger: GGAGGAGCTGCTGGGAGACAAGCTGGTGACGGGCGG...CCTCACAGTGGCAGCAGGTCCCACGGTGTTTGGAGATGGCTTGGGGATCCGTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| CDS-3UTR CAA 90 bp | CCACAGAGAAGCCCGGGTAGCTGGGCAACACTTCTCTGGGAACTCAGGGCTGAACTGCAGTCCTCGTCATaGAGCACCTCCACCCGACCC | + |
|
Preference number: 5 (lower is better) Translates to: PQRSPGSWATLLWELRAELQSSS*STSTRP Trigger: GGGTCGGGTGGAGGTGCTCAATGACGAGGACTGCAG...TTCAGCCCTGAGTTCCCAGAGAAGTGTTGCCCAGCTACCCGGGCTTCTCTGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| CDS-3UTR CAA 90 bp | AAACACCCACAAGGTTCCTTAGAGATATGGAAGTCCCCTGCCCAAGAACCCACTAGGCAGGGGCCCTCGTaGAGCTGCACAGCGTTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: KHPQGSLEIWKSPAQEPTRQGPS*SCTALE Trigger: CTCCAACGCTGTGCAGCTCAACGAGGGCCCCTGCCT...AGTGGGTTCTTGGGCAGGGGACTTCCATATCTCTAAGGAACCTTGTGGGTGTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| CDS GCA 90 bp | ATTCCAGACCTTCCGGGTCATCTCGGATCACCAGGAGCCCATTCCTaGACACAACCTTCCCTGTGGTGGCGTCTAGGAATATTAGCGATG | + |
|
Preference number: 5 (lower is better) Translates to: IPDLPGHLGSPGAHS*TQPSLWWRLGILAM Trigger: CATCGCTAATATTCCTAGACGCCACCACAGGGAAGGTTGTGTGCAGGAATGGGCTCCTGGTGATCCGAGATGACCCGGAAGGTCTGGAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| CDS CCA 90 bp | CATCTCGGATCACCAGGAGCCCATTCCTGCACACAACCTTCCCTGTaGTGGCGTCTAGGAATATTAGCGATGGAATGTTGGAGACTCGGT | + |
|
Preference number: 5 (lower is better) Translates to: HLGSPGAHSCTQPSL*WRLGILAMECWRLG Trigger: ACCGAGTCTCCAACATTCCATCGCTAATATTCCTAGACGCCACCACAGGGAAGGTTGTGTGCAGGAATGGGCTCCTGGTGATCCGAGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| CDS-3UTR CAA 90 bp | CACTGCTTTCTAGAGCACAGTTACCTTTGCAGGTTCCTAGAGGAAAGAAAACCCCCACTGCCGCTGGTCTaGGTCCGAAGACACGAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: HCFLEHSYLCRFLEERKPPLPLV*VRRHED Trigger: GTCTTCGTGTCTTCGGACCAAGACCAGCGGCAGTGG...GGGTTTTCTTTCCTCTAGGAACCTGCAAAGGTAACTGTGCTCTAGAAAGCAGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| CDS-3UTR CAA 90 bp | ATGCGCTGGTTTTCCCTCAGACCAAGAAAGATCACGTCCTTACAAAGCAAATTCGGCTGGATCAGCTGTTaGGCTGCCTCGGACTCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: MRWFSLRPRKITSLQSKFGWISC*AASDSP Trigger: CGGAGAGTCCGAGGCAGCCAAACAGCTGATCCAGCC...GAATTTGCTTTGTAAGGACGTGATCTTTCTTGGTCTGAGGGAAAACCAGCGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| CDS-3UTR CAA 90 bp | GAGGACAACTGCGTTTTCCAAAATAAATGGTTTGGGCTGGTAAAGTGTTGGGTTATTCCATACAGTCGGTaGAGACGAGACCGCCGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: EDNCVFQNKWFGLVKCWVIPYSR*RRDRRA Trigger: GGCCCGGCGGTCTCGTCTCAACCGACTGTATGGAAT...AACCCAACACTTTACCAGCCCAAACCATTTATTTTGGAAAACGCAGTTGTCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| CDS-3UTR CAA 90 bp | GAGGACAACTGCGTTTTCCAAAATAAATGGTTTGGGCTGGTAAAGTGTTGGGTTACATCCATCACGTACTaGGCCCGGGCTGACATGTCC | + |
|
Preference number: 5 (lower is better) Translates to: EDNCVFQNKWFGLVKCWVTSITY*ARADMS Trigger: GGACATGTCAGCCCGGGCCAAGTACGTGATGGATGT...AACCCAACACTTTACCAGCCCAAACCATTTATTTTGGAAAACGCAGTTGTCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| CDS-3UTR CAA 90 bp | ATTACAAGCCAACAATCCAATTCAGCAAGGAACAGCAGTGTCAATAGCTTGTTGTCACTAAAGTACTGTTaGAAAGACTCCTCTGACCTG | + |
|
Preference number: 5 (lower is better) Translates to: ITSQQSNSARNSSVNSLLSLKYC*KDSSDL Trigger: CAGGTCAGAGGAGTCTTTCAAACAGTACTTTAGTGA...CAACAAGCTATTGACACTGCTGTTCCTTGCTGAATTGGATTGTTGGCTTGTAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| CDS GCA 72 bp | AGCCCCAGCAGCGCGATGCCGCGGGCGCCCAGCGAATaGACGTCCACCTCCTCGCCACCGCCCGTCACCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SPSSAMPRAPSE*TSTSSPPPVTS Trigger: GCTGGTGACGGGCGGTGGCGAGGAGGTGGACGTGCATTCGCTGGGCGCCCGCGGCATCGCGCTGCTGGGGCT 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| CDS GCA 72 bp | TCAGGCTGCACCCGAAGTAGAGCCCCAGCAGCGCGATaGCGCGGGCGCCCAGCGAATGCACGTCCACCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: SGCTRSRAPAAR*RGRPANARPPP Trigger: AGGAGGTGGACGTGCATTCGCTGGGCGCCCGCGGCATCGCGCTGCTGGGGCTCTACTTCGGGTGCAGCCTGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| CDS CAA 90 bp | CAGCCATGGCATGTCCCGCACGAAGTCCTGCCACTGCCGCTGGTCTaGGTCCGAAGACACGAAGACGATCTCCAGGCGGTGCCGGGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: QPWHVPHEVLPLPLV*VRRHEDDLQAVPGL Trigger: GAGCCCCGGCACCGCCTGGAGATCGTCTTCGTGTCTTCGGACCAAGACCAGCGGCAGTGGCAGGACTTCGTGCGGGACATGCCATGGCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| CDS CCA 72 bp | CCCTGCGGGTCCAGCACGATGAGCGTGGGGATGCCTTaGATTCCATACAGTCGGTTGAGACGAGACCGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: PCGSSTMSVGMP*IPYSRLRRDRR Trigger: CCGGCGGTCTCGTCTCAACCGACTGTATGGAATCCAAGGCATCCCCACGCTCATCGTGCTGGACCCGCAGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| CDS CAA 72 bp | CCCCTGCGGGTCCAGCACGATGAGCGTGGGGATGCCTaGGATTCCATACAGTCGGTTGAGACGAGACCGCCG | + |
|
Preference number: 6 (lower is better) Translates to: PLRVQHDERGDA*DSIQSVETRPP Trigger: CGGCGGTCTCGTCTCAACCGACTGTATGGAATCCAAGGCATCCCCACGCTCATCGTGCTGGACCCGCAGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| CDS GCA 72 bp | GCCAGCCATGGCATGTCCCGCACGAAGTCCTGCCACTaGCGCTGGTCTTGGTCCGAAGACACGAAGACGATC | + |
|
Preference number: 6 (lower is better) Translates to: ASHGMSRTKSCH*RWSWSEDTKTI Trigger: GATCGTCTTCGTGTCTTCGGACCAAGACCAGCGGCAGTGGCAGGACTTCGTGCGGGACATGCCATGGCTGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| CDS CCA 72 bp | ATGTCCCGCACGAAGTCCTGCCACTGCCGCTGGTCTTaGTCCGAAGACACGAAGACGATCTCCAGGCGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: MSRTKSCHCRWS*SEDTKTISRRC Trigger: GCACCGCCTGGAGATCGTCTTCGTGTCTTCGGACCAAGACCAGCGGCAGTGGCAGGACTTCGTGCGGGACAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| CDS CAA 72 bp | CATGTCCCGCACGAAGTCCTGCCACTGCCGCTGGTCTaGGTCCGAAGACACGAAGACGATCTCCAGGCGGTG | + |
|
Preference number: 6 (lower is better) Translates to: HVPHEVLPLPLV*VRRHEDDLQAV Trigger: CACCGCCTGGAGATCGTCTTCGTGTCTTCGGACCAAGACCAGCGGCAGTGGCAGGACTTCGTGCGGGACATG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| CDS CCA 72 bp | CATGGCATGTCCCGCACGAAGTCCTGCCACTGCCGCTaGTCTTGGTCCGAAGACACGAAGACGATCTCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: HGMSRTKSCHCR*SWSEDTKTISR Trigger: CCTGGAGATCGTCTTCGTGTCTTCGGACCAAGACCAGCGGCAGTGGCAGGACTTCGTGCGGGACATGCCATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| CDS TCA 72 bp | GATCTCTTCTACATCCATCACGTACTTGGCCCGGGCTaGCATGTCCAGAATGGTGAGCAGAGGCGCCGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: DLFYIHHVLGPG*HVQNGEQRRRL Trigger: GAGGCGGCGCCTCTGCTCACCATTCTGGACATGTCAGCCCGGGCCAAGTACGTGATGGATGTAGAAGAGATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| CDS GCA 72 bp | CACTCTGGTAAGGCTTCGGCAGGGTGGACACCAGTGTaGAGAGAAATAGACTCCCACGTGAGACCCCTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: HSGKASAGWTPV*REIDSHVRPLQ Trigger: CTGGAGGGGTCTCACGTGGGAGTCTATTTCTCTGCACACTGGTGTCCACCCTGCCGAAGCCTTACCAGAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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| CDS GCA 72 bp | CTTCCGGGTCATCTCGGATCACCAGGAGCCCATTCCTaGACACAACCTTCCCTGTGGTGGCGTCTAGGAATA | + |
|
Preference number: 6 (lower is better) Translates to: LPGHLGSPGAHS*TQPSLWWRLGI Trigger: TATTCCTAGACGCCACCACAGGGAAGGTTGTGTGCAGGAATGGGCTCCTGGTGATCCGAGATGACCCGGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021204.4 |
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