Pregenerated sensors for NXF7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031410Ensembl transcript IDs: ENSMUST00000033784.13, ENSMUST00000113163.8, ENSMUST00000137977.8, ENSMUST00000141310.2, ENSMUST00000150900.8
Found 104 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGGGATGGCCTATGTTGCCTGGCTTACATGATAACTTTGGCTTTGTaGTTAGCCAGGCTAACAGCAGGGGTCATAAGTAAGAAACAGAGA | + |
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Preference number: 1 (lower is better) Translates to: GDGLCCLAYMITLAL*LARLTAGVISKKQR Trigger: TCTCTGTTTCTTACTTATGACCCCTGCTGTTAGCCTGGCTAACCACAAAGCCAAAGTTATCATGTAAGCCAGGCAACATAGGCCATCCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113163.8 ENSMUST00000137977.8 |
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| 3UTR CAA 72 bp | GGGGATGGCCTATGTTGCCTGGCTTACATGATAACTTaGGCTTTGTGGTTAGCCAGGCTAACAGCAGGGGTC | + |
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Preference number: 4 (lower is better) Translates to: GDGLCCLAYMIT*ALWLARLTAGV Trigger: GACCCCTGCTGTTAGCCTGGCTAACCACAAAGCCAAAGTTATCATGTAAGCCAGGCAACATAGGCCATCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113163.8 ENSMUST00000137977.8 |
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| CDS-3UTR GCA 90 bp | GGGGGATGGCCTATGTTGCCTGGCTTACATGATAACTTTGGCTTTGTGGTTAGCAATGATCGGTCCTCTTaGCAGCATAGCTCAGGGAAG | + |
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Preference number: 4 (lower is better) Translates to: GGWPMLPGLHDNFGFVVSNDRSS*QHSSGK Trigger: CTTCCCTGAGCTATGCTGGCAAGAGGACCGATCATT...GCTAACCACAAAGCCAAAGTTATCATGTAAGCCAGGCAACATAGGCCATCCCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113163.8 |
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| CDS-3UTR CCA 90 bp | GGGGGATGGCCTATGTTGCCTGGCTTACATGATAACTTTGGCTTTGTGGTTAGCGGCAATGCGAAAGTCTaGGACAAAGAACTGGATCCG | + |
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Preference number: 4 (lower is better) Translates to: GGWPMLPGLHDNFGFVVSGNAKV*DKELDP Trigger: CGGATCCAGTTCTTTGTCCCAGACTTTCGCATTGCC...GCTAACCACAAAGCCAAAGTTATCATGTAAGCCAGGCAACATAGGCCATCCCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113163.8 ENSMUST00000137977.8 |
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| CDS-3UTR TCA 90 bp | TTACATGATAACTTTGGCTTTGTGGTTAGCCAGGCTAACAGCAGGGGTCATAAGCATCACTCTGGGCTTTaGAAGGCAGAATCGTGTGCC | + |
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Preference number: 4 (lower is better) Translates to: LHDNFGFVVSQANSRGHKHHSGL*KAESCA Trigger: GGCACACGATTCTGCCTTTCAAAGCCCAGAGTGATG...CTTATGACCCCTGCTGTTAGCCTGGCTAACCACAAAGCCAAAGTTATCATGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113163.8 |
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| CDS-3UTR TCA 90 bp | TTACATGATAACTTTGGCTTTGTGGTTAGCCAGGCTAACAGCAGGGGTCATAAGCTGGATCATTGGGGTTaGAGGGAATGGTCAGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LHDNFGFVVSQANSRGHKLDHWG*REWSGR Trigger: TCTCCCTGACCATTCCCTTCAACCCCAATGATCCAG...CTTATGACCCCTGCTGTTAGCCTGGCTAACCACAAAGCCAAAGTTATCATGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113163.8 ENSMUST00000137977.8 |
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| CDS-3UTR TCA 90 bp | GGGGGATGGCCTATGTTGCCTGGCTTACATGATAACTTTGGCTTTGTGGTTAGCTTCAGTAGCTGCCTCTaGATGTGGAACTCCTTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: GGWPMLPGLHDNFGFVVSFSSCL*MWNSLK Trigger: TTTCAAGGAGTTCCACATTCAGAGGCAGCTACTGAA...GCTAACCACAAAGCCAAAGTTATCATGTAAGCCAGGCAACATAGGCCATCCCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113163.8 ENSMUST00000137977.8 |
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| CDS-3UTR TCA 90 bp | TTACATGATAACTTTGGCTTTGTGGTTAGCCAGGCTAACAGCAGGGGTCATAAGGGGTGCCCTCTTCCTTaGACAACCCACAAACAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LHDNFGFVVSQANSRGHKGCPLP*TTHKQR Trigger: TCTCTGTTTGTGGGTTGTTCAAGGAAGAGGGCACCC...CTTATGACCCCTGCTGTTAGCCTGGCTAACCACAAAGCCAAAGTTATCATGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113163.8 ENSMUST00000137977.8 |
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| CDS-3UTR TCA 90 bp | ATGATAACTTTGGCTTTGTGGTTAGCCAGGCTAACAGCAGGGGTCATAAGTAAGGGGTGCCCTCTTCCTTaGACAACCCACAAACAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: MITLALWLARLTAGVISKGCPLP*TTHKQR Trigger: TCTCTGTTTGTGGGTTGTTCAAGGAAGAGGGCACCC...CTTACTTATGACCCCTGCTGTTAGCCTGGCTAACCACAAAGCCAAAGTTATCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113163.8 ENSMUST00000137977.8 |
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| CDS-3UTR GCA 90 bp | GGGGGATGGCCTATGTTGCCTGGCTTACATGATAACTTTGGCTTTGTGGTTAGCTATCTGAAGGACCCCTaGTTCCTTTCATTAGAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: GGWPMLPGLHDNFGFVVSYLKDP*FLSLEH Trigger: GTGCTCTAATGAAAGGAAGCAGGGGTCCTTCAGATA...GCTAACCACAAAGCCAAAGTTATCATGTAAGCCAGGCAACATAGGCCATCCCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113163.8 |
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| CDS-3UTR GCA 90 bp | TTACATGATAACTTTGGCTTTGTGGTTAGCCAGGCTAACAGCAGGGGTCATAAGATCGGTCTGGGAAGGTaGTGCACAATGGGTTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LHDNFGFVVSQANSRGHKIGLGR*CTMGSL Trigger: AAGGGAACCCATTGTGCAGCACCTTCCCAGACCGAT...CTTATGACCCCTGCTGTTAGCCTGGCTAACCACAAAGCCAAAGTTATCATGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113163.8 ENSMUST00000137977.8 |
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| CDS-3UTR TCA 90 bp | GGGGGATGGCCTATGTTGCCTGGCTTACATGATAACTTTGGCTTTGTGGTTAGCTCTTCAAGGCACTTCTaGGACCATTCAAGTTTCATC | + |
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Preference number: 4 (lower is better) Translates to: GGWPMLPGLHDNFGFVVSSSRHF*DHSSFI Trigger: GATGAAACTTGAATGGTCTCAGAAGTGCCTTGAAGA...GCTAACCACAAAGCCAAAGTTATCATGTAAGCCAGGCAACATAGGCCATCCCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113163.8 ENSMUST00000137977.8 |
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| CDS-3UTR GCA 90 bp | TTACATGATAACTTTGGCTTTGTGGTTAGCCAGGCTAACAGCAGGGGTCATAAGCCGTCTTCTGTGAACTaGCCTGCTTCTCTCTGTTCA | + |
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Preference number: 4 (lower is better) Translates to: LHDNFGFVVSQANSRGHKPSSVN*PASLCS Trigger: TGAACAGAGAGAAGCAGGGCAGTTCACAGAAGACGG...CTTATGACCCCTGCTGTTAGCCTGGCTAACCACAAAGCCAAAGTTATCATGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113163.8 |
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| CDS-3UTR CCA 90 bp | GGGGGATGGCCTATGTTGCCTGGCTTACATGATAACTTTGGCTTTGTGGTTAGCGATCTCTTCAGAGCTTaGATTCCTCACAAAAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GGWPMLPGLHDNFGFVVSDLFRA*IPHKKL Trigger: CAGCTTTTTGTGAGGAATCCAAGCTCTGAAGAGATC...GCTAACCACAAAGCCAAAGTTATCATGTAAGCCAGGCAACATAGGCCATCCCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000113163.8 ENSMUST00000137977.8 |
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| CDS-3UTR TCA 90 bp | ACAGAGAAACAAGAATGTGAACAAGAGGAAGATAACATCCAGCCGTGTGTTTTTCAAAGCGGAGCTTTTTaGGGCAGAGAGCATGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: TEKQECEQEEDNIQPCVFQSGAF*GREHAG Trigger: CCCAGCATGCTCTCTGCCTCAAAAAGCTCCGCTTTG...AAAAACACACGGCTGGATGTTATCTTCCTCTTGTTCACATTCTTGTTTCTCTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000113163.8 ENSMUST00000137977.8 |
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| CDS-3UTR TCA 90 bp | TTACATGATAACTTTGGCTTTGTGGTTAGCCAGGCTAACAGCAGGGGTCATAAGTCACTTGGAAAGAGCTaGAGGCATGTAGAGTTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LHDNFGFVVSQANSRGHKSLGKS*RHVEFG Trigger: CCCAAACTCTACATGCCTTCAGCTCTTTCCAAGTGA...CTTATGACCCCTGCTGTTAGCCTGGCTAACCACAAAGCCAAAGTTATCATGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113163.8 ENSMUST00000137977.8 |
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| CDS-3UTR TCA 90 bp | GGGGGATGGCCTATGTTGCCTGGCTTACATGATAACTTTGGCTTTGTGGTTAGCCACAATATACATGTTTaGACTGCCAAGGAGAGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: GGWPMLPGLHDNFGFVVSHNIHV*TAKESN Trigger: ATTGCTCTCCTTGGCAGTTCAAACATGTATATTGTG...GCTAACCACAAAGCCAAAGTTATCATGTAAGCCAGGCAACATAGGCCATCCCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113163.8 ENSMUST00000137977.8 |
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| CDS-3UTR CCA 90 bp | GGGGGATGGCCTATGTTGCCTGGCTTACATGATAACTTTGGCTTTGTGGTTAGCATCAGGCTATCTAATTaGAACAGTTTGTTGCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: GGWPMLPGLHDNFGFVVSIRLSN*NSLLLL Trigger: GAGCAGCAACAAACTGTTCCAATTAGATAGCCTGAT...GCTAACCACAAAGCCAAAGTTATCATGTAAGCCAGGCAACATAGGCCATCCCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113163.8 |
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| CDS-3UTR TCA 90 bp | GGGGGATGGCCTATGTTGCCTGGCTTACATGATAACTTTGGCTTTGTGGTTAGCTATGTATCTTATAGCTaGTATCCTTCAATGCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GGWPMLPGLHDNFGFVVSYVSYS*YPSMQR Trigger: CCTCTGCATTGAAGGATATCAGCTATAAGATACATA...GCTAACCACAAAGCCAAAGTTATCATGTAAGCCAGGCAACATAGGCCATCCCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113163.8 ENSMUST00000137977.8 |
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| CDS-3UTR TCA 90 bp | ACAGAGAAACAAGAATGTGAACAAGAGGAAGATAACATCCAGCCGTGTGTTTTTCTGGATCATTGGGGTTaGAGGGAATGGTCAGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: TEKQECEQEEDNIQPCVFLDHWG*REWSGR Trigger: TCTCCCTGACCATTCCCTTCAACCCCAATGATCCAG...AAAAACACACGGCTGGATGTTATCTTCCTCTTGTTCACATTCTTGTTTCTCTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000113163.8 ENSMUST00000137977.8 |
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| CDS-3UTR GCA 90 bp | TTACATGATAACTTTGGCTTTGTGGTTAGCCAGGCTAACAGCAGGGGTCATAAGGCTGATATCCTTCAATaGAGAGGCAATGCGAAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LHDNFGFVVSQANSRGHKADILQ*RGNAKV Trigger: GACTTTCGCATTGCCTCTGCATTGAAGGATATCAGC...CTTATGACCCCTGCTGTTAGCCTGGCTAACCACAAAGCCAAAGTTATCATGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113163.8 ENSMUST00000137977.8 |
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| CDS-3UTR GCA 90 bp | ACAGAGAAACAAGAATGTGAACAAGAGGAAGATAACATCCAGCCGTGTGTTTTTATCGGTCTGGGAAGGTaGTGCACAATGGGTTCCCTT | + |
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Preference number: 4 (lower is better) Translates to: TEKQECEQEEDNIQPCVFIGLGR*CTMGSL Trigger: AAGGGAACCCATTGTGCAGCACCTTCCCAGACCGAT...AAAAACACACGGCTGGATGTTATCTTCCTCTTGTTCACATTCTTGTTTCTCTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113163.8 ENSMUST00000137977.8 |
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| CDS-3UTR CCA 90 bp | ATGATAACTTTGGCTTTGTGGTTAGCCAGGCTAACAGCAGGGGTCATAAGTAAGCATATCTTTTCCTCATaGCCAGCTTCAGCTGTTCCA | + |
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Preference number: 4 (lower is better) Translates to: MITLALWLARLTAGVISKHIFSS*PASAVP Trigger: TGGAACAGCTGAAGCTGGCCATGAGGAAAAGATATG...CTTACTTATGACCCCTGCTGTTAGCCTGGCTAACCACAAAGCCAAAGTTATCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113163.8 ENSMUST00000137977.8 |
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| CDS-3UTR TCA 90 bp | ATGATAACTTTGGCTTTGTGGTTAGCCAGGCTAACAGCAGGGGTCATAAGTAAGTCTTCAAGGCACTTCTaGGACCATTCAAGTTTCATC | + |
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Preference number: 4 (lower is better) Translates to: MITLALWLARLTAGVISKSSRHF*DHSSFI Trigger: GATGAAACTTGAATGGTCTCAGAAGTGCCTTGAAGA...CTTACTTATGACCCCTGCTGTTAGCCTGGCTAACCACAAAGCCAAAGTTATCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113163.8 ENSMUST00000137977.8 |
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| CDS-3UTR GCA 90 bp | ACAGAGAAACAAGAATGTGAACAAGAGGAAGATAACATCCAGCCGTGTGTTTTTGGTTTGTCATCTCTCTaGGCCGTGACATGGATTTGG | + |
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Preference number: 4 (lower is better) Translates to: TEKQECEQEEDNIQPCVFGLSSL*AVTWIW Trigger: CCAAATCCATGTCACGGCGCAGAGAGATGACAAACC...AAAAACACACGGCTGGATGTTATCTTCCTCTTGTTCACATTCTTGTTTCTCTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113163.8 |
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| CDS-3UTR GCA 90 bp | TTACATGATAACTTTGGCTTTGTGGTTAGCCAGGCTAACAGCAGGGGTCATAAGGATCTTGAGTTGCGGTaGCTTCTTTACCACATCAAT | + |
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Preference number: 4 (lower is better) Translates to: LHDNFGFVVSQANSRGHKDLELR*LLYHIN Trigger: ATTGATGTGGTAAAGAAGGCACCGCAACTCAAGATC...CTTATGACCCCTGCTGTTAGCCTGGCTAACCACAAAGCCAAAGTTATCATGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113163.8 |
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| CDS-3UTR GCA 90 bp | ATGATAACTTTGGCTTTGTGGTTAGCCAGGCTAACAGCAGGGGTCATAAGTAAGTTCAAGATCTTGAGTTaGGGTGCCTTCTTTACCACA | + |
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Preference number: 4 (lower is better) Translates to: MITLALWLARLTAGVISKFKILS*GAFFTT Trigger: TGTGGTAAAGAAGGCACCGCAACTCAAGATCTTGAA...CTTACTTATGACCCCTGCTGTTAGCCTGGCTAACCACAAAGCCAAAGTTATCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113163.8 |
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| CDS-3UTR CCA 90 bp | ACAGAGAAACAAGAATGTGAACAAGAGGAAGATAACATCCAGCCGTGTGTTTTTGGCAATGCGAAAGTCTaGGACAAAGAACTGGATCCG | + |
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Preference number: 4 (lower is better) Translates to: TEKQECEQEEDNIQPCVFGNAKV*DKELDP Trigger: CGGATCCAGTTCTTTGTCCCAGACTTTCGCATTGCC...AAAAACACACGGCTGGATGTTATCTTCCTCTTGTTCACATTCTTGTTTCTCTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113163.8 ENSMUST00000137977.8 |
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| CDS-3UTR CCA 90 bp | ATGATAACTTTGGCTTTGTGGTTAGCCAGGCTAACAGCAGGGGTCATAAGTAAGAGGCAGAGAGCATGCTaGGAAACATCATATCTTTTC | + |
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Preference number: 4 (lower is better) Translates to: MITLALWLARLTAGVISKRQRAC*ETSYLF Trigger: GAAAAGATATGATGTTTCCCAGCATGCTCTCTGCCT...CTTACTTATGACCCCTGCTGTTAGCCTGGCTAACCACAAAGCCAAAGTTATCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113163.8 ENSMUST00000137977.8 |
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| CDS-3UTR GCA 90 bp | TTACATGATAACTTTGGCTTTGTGGTTAGCCAGGCTAACAGCAGGGGTCATAAGGGAACAGTTTGTTGCTaGTCAAGTTCAAGGATAACA | + |
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Preference number: 4 (lower is better) Translates to: LHDNFGFVVSQANSRGHKGTVCC*SSSRIT Trigger: TGTTATCCTTGAACTTGAGCAGCAACAAACTGTTCC...CTTATGACCCCTGCTGTTAGCCTGGCTAACCACAAAGCCAAAGTTATCATGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113163.8 |
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| CDS-3UTR CCA 90 bp | ATGATAACTTTGGCTTTGTGGTTAGCCAGGCTAACAGCAGGGGTCATAAGTAAGTTTGAAGAATTCCTTTaGGATCTTGCACTTGGTCTG | + |
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Preference number: 4 (lower is better) Translates to: MITLALWLARLTAGVISKFEEFL*DLALGL Trigger: CAGACCAAGTGCAAGATCCCAAAGGAATTCTTCAAA...CTTACTTATGACCCCTGCTGTTAGCCTGGCTAACCACAAAGCCAAAGTTATCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113163.8 ENSMUST00000137977.8 |
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| CDS-3UTR TCA 90 bp | TTACATGATAACTTTGGCTTTGTGGTTAGCCAGGCTAACAGCAGGGGTCATAAGTATGTATCTTATAGCTaGTATCCTTCAATGCAGAGG | + |
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Preference number: 4 (lower is better) Translates to: LHDNFGFVVSQANSRGHKYVSYS*YPSMQR Trigger: CCTCTGCATTGAAGGATATCAGCTATAAGATACATA...CTTATGACCCCTGCTGTTAGCCTGGCTAACCACAAAGCCAAAGTTATCATGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113163.8 ENSMUST00000137977.8 |
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| CDS-3UTR TCA 90 bp | ACAGAGAAACAAGAATGTGAACAAGAGGAAGATAACATCCAGCCGTGTGTTTTTTTCAGTAGCTGCCTCTaGATGTGGAACTCCTTGAAA | + |
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Preference number: 4 (lower is better) Translates to: TEKQECEQEEDNIQPCVFFSSCL*MWNSLK Trigger: TTTCAAGGAGTTCCACATTCAGAGGCAGCTACTGAA...AAAAACACACGGCTGGATGTTATCTTCCTCTTGTTCACATTCTTGTTTCTCTGT 41% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 2 transcripts: ENSMUST00000113163.8 ENSMUST00000137977.8 |
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| CDS-3UTR TCA 90 bp | ACAGAGAAACAAGAATGTGAACAAGAGGAAGATAACATCCAGCCGTGTGTTTTTGAGAAAGGACAAGCTTaGAGTTGGAGTATGATGTGG | + |
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Preference number: 4 (lower is better) Translates to: TEKQECEQEEDNIQPCVFEKGQA*SWSMMW Trigger: CCACATCATACTCCAACTTCAAGCTTGTCCTTTCTC...AAAAACACACGGCTGGATGTTATCTTCCTCTTGTTCACATTCTTGTTTCTCTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113163.8 ENSMUST00000137977.8 |
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| CDS-3UTR GCA 90 bp | ACAGAGAAACAAGAATGTGAACAAGAGGAAGATAACATCCAGCCGTGTGTTTTTTTCTGTGAACTGCCCTaGTTCTCTCTGTTCAGGTTT | + |
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Preference number: 4 (lower is better) Translates to: TEKQECEQEEDNIQPCVFFCELP*FSLFRF Trigger: AAACCTGAACAGAGAGAAGCAGGGCAGTTCACAGAA...AAAAACACACGGCTGGATGTTATCTTCCTCTTGTTCACATTCTTGTTTCTCTGT 41% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENSMUST00000113163.8 |
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| CDS-3UTR GCA 90 bp | ACAGAGAAACAAGAATGTGAACAAGAGGAAGATAACATCCAGCCGTGTGTTTTTGCTGATATCCTTCAATaGAGAGGCAATGCGAAAGTC | + |
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Preference number: 4 (lower is better) Translates to: TEKQECEQEEDNIQPCVFADILQ*RGNAKV Trigger: GACTTTCGCATTGCCTCTGCATTGAAGGATATCAGC...AAAAACACACGGCTGGATGTTATCTTCCTCTTGTTCACATTCTTGTTTCTCTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113163.8 ENSMUST00000137977.8 |
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| CDS-3UTR GCA 90 bp | TTACATGATAACTTTGGCTTTGTGGTTAGCCAGGCTAACAGCAGGGGTCATAAGAGGGCTTCATTAACTTaGGTTCTTGAGTGTTCATTA | + |
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Preference number: 4 (lower is better) Translates to: LHDNFGFVVSQANSRGHKRASLT*VLECSL Trigger: TAATGAACACTCAAGAACGCAAGTTAATGAAGCCCT...CTTATGACCCCTGCTGTTAGCCTGGCTAACCACAAAGCCAAAGTTATCATGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113163.8 ENSMUST00000137977.8 |
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| CDS-3UTR CCA 90 bp | ACAGAGAAACAAGAATGTGAACAAGAGGAAGATAACATCCAGCCGTGTGTTTTTTTTCCACCATCACTCTaGGCTTTGAAAGGCAGAATC | + |
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Preference number: 4 (lower is better) Translates to: TEKQECEQEEDNIQPCVFFPPSL*ALKGRI Trigger: GATTCTGCCTTTCAAAGCCCAGAGTGATGGTGGAAA...AAAAACACACGGCTGGATGTTATCTTCCTCTTGTTCACATTCTTGTTTCTCTGT 41% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113163.8 |
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| CDS-3UTR CCA 90 bp | ACAGAGAAACAAGAATGTGAACAAGAGGAAGATAACATCCAGCCGTGTGTTTTTCATATCTTTTCCTCATaGCCAGCTTCAGCTGTTCCA | + |
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Preference number: 4 (lower is better) Translates to: TEKQECEQEEDNIQPCVFHIFSS*PASAVP Trigger: TGGAACAGCTGAAGCTGGCCATGAGGAAAAGATATG...AAAAACACACGGCTGGATGTTATCTTCCTCTTGTTCACATTCTTGTTTCTCTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000113163.8 ENSMUST00000137977.8 |
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| CDS-3UTR TCA 90 bp | ACAGAGAAACAAGAATGTGAACAAGAGGAAGATAACATCCAGCCGTGTGTTTTTATTCTTTGCTGCTCTTaGGAAAGGACAAGCTTGAAG | + |
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Preference number: 4 (lower is better) Translates to: TEKQECEQEEDNIQPCVFILCCS*ERTSLK Trigger: CTTCAAGCTTGTCCTTTCTCAAGAGCAGCAAAGAAT...AAAAACACACGGCTGGATGTTATCTTCCTCTTGTTCACATTCTTGTTTCTCTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113163.8 ENSMUST00000137977.8 |
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| CDS-3UTR GCA 90 bp | ACAGAGAAACAAGAATGTGAACAAGAGGAAGATAACATCCAGCCGTGTGTTTTTTTGAGGCAGAGAGCATaGTGGGAAACATCATATCTT | + |
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Preference number: 4 (lower is better) Translates to: TEKQECEQEEDNIQPCVFLRQRA*WETSYL Trigger: AAGATATGATGTTTCCCAGCATGCTCTCTGCCTCAA...AAAAACACACGGCTGGATGTTATCTTCCTCTTGTTCACATTCTTGTTTCTCTGT 40% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 2 transcripts: ENSMUST00000113163.8 ENSMUST00000137977.8 |
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| CDS-3UTR CCA 90 bp | ACAGAGAAACAAGAATGTGAACAAGAGGAAGATAACATCCAGCCGTGTGTTTTTGATCTCTTCAGAGCTTaGATTCCTCACAAAAAGCTG | + |
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Preference number: 4 (lower is better) Translates to: TEKQECEQEEDNIQPCVFDLFRA*IPHKKL Trigger: CAGCTTTTTGTGAGGAATCCAAGCTCTGAAGAGATC...AAAAACACACGGCTGGATGTTATCTTCCTCTTGTTCACATTCTTGTTTCTCTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000113163.8 ENSMUST00000137977.8 |
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| CDS-3UTR TCA 90 bp | ACAGAGAAACAAGAATGTGAACAAGAGGAAGATAACATCCAGCCGTGTGTTTTTCACAATATACATGTTTaGACTGCCAAGGAGAGCAAT | + |
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Preference number: 4 (lower is better) Translates to: TEKQECEQEEDNIQPCVFHNIHV*TAKESN Trigger: ATTGCTCTCCTTGGCAGTTCAAACATGTATATTGTG...AAAAACACACGGCTGGATGTTATCTTCCTCTTGTTCACATTCTTGTTTCTCTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113163.8 ENSMUST00000137977.8 |
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| CDS-3UTR CCA 90 bp | ACAGAGAAACAAGAATGTGAACAAGAGGAAGATAACATCCAGCCGTGTGTTTTTTTTGAAGAATTCCTTTaGGATCTTGCACTTGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TEKQECEQEEDNIQPCVFFEEFL*DLALGL Trigger: CAGACCAAGTGCAAGATCCCAAAGGAATTCTTCAAA...AAAAACACACGGCTGGATGTTATCTTCCTCTTGTTCACATTCTTGTTTCTCTGT 39% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113163.8 ENSMUST00000137977.8 |
||
| CDS-3UTR TCA 90 bp | ACAGAGAAACAAGAATGTGAACAAGAGGAAGATAACATCCAGCCGTGTGTTTTTAGGAATCTGTGTACTTaGTTCTTTATCACCTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: TEKQECEQEEDNIQPCVFRNLCT*FFITSE Trigger: TTCAGAGGTGATAAAGAATCAAGTACACAGATTCCT...AAAAACACACGGCTGGATGTTATCTTCCTCTTGTTCACATTCTTGTTTCTCTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113163.8 ENSMUST00000137977.8 |
||
| CDS GCA 90 bp | GACCTTGAACCAGCTCCCCAGTTCTCCGTCTTCTGTGAACTGCCCTaGTTCTCTCTGTTCAGGTTTGTCATCTCTCTGCGCCGTGACATG | + |
|
Preference number: 5 (lower is better) Translates to: DLEPAPQFSVFCELP*FSLFRFVISLRRDM Trigger: CATGTCACGGCGCAGAGAGATGACAAACCTGAACAGAGAGAAGCAGGGCAGTTCACAGAAGACGGAGAACTGGGGAGCTGGTTCAAGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033784.13 ENSMUST00000113163.8 ENSMUST00000141310.2 ENSMUST00000150900.8 |
||
| CDS-3UTR CAA 90 bp | GGGGGATGGCCTATGTTGCCTGGCTTACATGATAACTTTGGCTTTGTGGTTAGCGCACGAACACATTCCTaGGGGGTGCCCTCTTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GGWPMLPGLHDNFGFVVSARTHS*GVPSSL Trigger: CAAGGAAGAGGGCACCCCCAAGGAATGTGTTCGTGC...GCTAACCACAAAGCCAAAGTTATCATGTAAGCCAGGCAACATAGGCCATCCCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000113163.8 ENSMUST00000137977.8 |
||
| CDS GCA 90 bp | TCTGTGAACTGCCCTGCTTCTCTCTGTTCAGGTTTGTCATCTCTCTaGGCCGTGACATGGATTTGGTCTTCCATATGCTCTTCCTCCCTA | + |
|
Preference number: 5 (lower is better) Translates to: SVNCPASLCSGLSSL*AVTWIWSSICSSSL Trigger: TAGGGAGGAAGAGCATATGGAAGACCAAATCCATGTCACGGCGCAGAGAGATGACAAACCTGAACAGAGAGAAGCAGGGCAGTTCACAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033784.13 ENSMUST00000113163.8 ENSMUST00000141310.2 ENSMUST00000150900.8 |
||
| CDS CCA 90 bp | ATGCGAAAGTCTGGGACAAAGAACTGGATCCGGTGTTTGTCACAATaGAAATCCACAGGTGTGAAGGGCACGCTGCAAAGGCTGTGGATT | + |
|
Preference number: 5 (lower is better) Translates to: MRKSGTKNWIRCLSQ*KSTGVKGTLQRLWI Trigger: AATCCACAGCCTTTGCAGCGTGCCCTTCACACCTGTGGATTTCCATTGTGACAAACACCGGATCCAGTTCTTTGTCCCAGACTTTCGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033784.13 ENSMUST00000113163.8 ENSMUST00000137977.8 |
||
| CDS GCA 90 bp | AAGGCAGAATCGTGTGCCCAGTATGCTCATAATGATCGGTCCTCTTaGCAGCATAGCTCAGGGAAGAAACCCTGTCTTTCTTTCTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: KAESCAQYAHNDRSS*QHSSGKKPCLSFFL Trigger: CAGGAAGAAAGAAAGACAGGGTTTCTTCCCTGAGCTATGCTGGCAAGAGGACCGATCATTATGAGCATACTGGGCACACGATTCTGCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000141310.2 ENSMUST00000150900.8 |
||
| CDS-3UTR CAA 90 bp | TTACATGATAACTTTGGCTTTGTGGTTAGCCAGGCTAACAGCAGGGGTCATAAGGGGGTGCCCTCTTCCTaGAACAACCCACAAACAGAG | + |
|
Preference number: 5 (lower is better) Translates to: LHDNFGFVVSQANSRGHKGVPSS*NNPQTE Trigger: CTCTGTTTGTGGGTTGTTCAAGGAAGAGGGCACCCC...CTTATGACCCCTGCTGTTAGCCTGGCTAACCACAAAGCCAAAGTTATCATGTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000113163.8 ENSMUST00000137977.8 |
||
| CDS-3UTR CAA 90 bp | ATGATAACTTTGGCTTTGTGGTTAGCCAGGCTAACAGCAGGGGTCATAAGTAAGTCAAAGCGGAGCTTTTaGAGGCAGAGAGCATGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: MITLALWLARLTAGVISKSKRSF*RQRACW Trigger: CCAGCATGCTCTCTGCCTCAAAAAGCTCCGCTTTGA...CTTACTTATGACCCCTGCTGTTAGCCTGGCTAACCACAAAGCCAAAGTTATCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113163.8 ENSMUST00000137977.8 |
||
| CDS-3UTR CAA 90 bp | GGGGGATGGCCTATGTTGCCTGGCTTACATGATAACTTTGGCTTTGTGGTTAGCCTTAGGAAAATTCTCTaGGATGATCTGAAGGGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: GGWPMLPGLHDNFGFVVSLRKIL*DDLKGG Trigger: GCCACCCTTCAGATCATCCAAGAGAATTTTCCTAAG...GCTAACCACAAAGCCAAAGTTATCATGTAAGCCAGGCAACATAGGCCATCCCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000113163.8 ENSMUST00000137977.8 |
||
| CDS-3UTR CAA 90 bp | TTACATGATAACTTTGGCTTTGTGGTTAGCCAGGCTAACAGCAGGGGTCATAAGTCTGGATCATTGGGGTaGAAGGGAATGGTCAGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LHDNFGFVVSQANSRGHKSGSLG*KGMVRE Trigger: CTCCCTGACCATTCCCTTCAACCCCAATGATCCAGA...CTTATGACCCCTGCTGTTAGCCTGGCTAACCACAAAGCCAAAGTTATCATGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113163.8 ENSMUST00000137977.8 |
||
| CDS-3UTR CAA 90 bp | TTACATGATAACTTTGGCTTTGTGGTTAGCCAGGCTAACAGCAGGGGTCATAAGCGCCGTGACATGGATTaGGTCTTCCATATGCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LHDNFGFVVSQANSRGHKRRDMD*VFHMLF Trigger: GAAGAGCATATGGAAGACCAAATCCATGTCACGGCG...CTTATGACCCCTGCTGTTAGCCTGGCTAACCACAAAGCCAAAGTTATCATGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113163.8 |
||
| CDS-3UTR CAA 90 bp | GGGGGATGGCCTATGTTGCCTGGCTTACATGATAACTTTGGCTTTGTGGTTAGCAAAACAGATGTTCACTaGGAAAGAGCTGAAGGCATG | + |
|
Preference number: 5 (lower is better) Translates to: GGWPMLPGLHDNFGFVVSKTDVH*ERAEGM Trigger: CATGCCTTCAGCTCTTTCCAAGTGAACATCTGTTTT...GCTAACCACAAAGCCAAAGTTATCATGTAAGCCAGGCAACATAGGCCATCCCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000113163.8 ENSMUST00000137977.8 |
||
| CDS-3UTR CAA 90 bp | ACAGAGAAACAAGAATGTGAACAAGAGGAAGATAACATCCAGCCGTGTGTTTTTGCACGAACACATTCCTaGGGGGTGCCCTCTTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: TEKQECEQEEDNIQPCVFARTHS*GVPSSL Trigger: CAAGGAAGAGGGCACCCCCAAGGAATGTGTTCGTGC...AAAAACACACGGCTGGATGTTATCTTCCTCTTGTTCACATTCTTGTTTCTCTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000113163.8 ENSMUST00000137977.8 |
||
| CDS-3UTR CAA 90 bp | GGGGGATGGCCTATGTTGCCTGGCTTACATGATAACTTTGGCTTTGTGGTTAGCATGACAAAGGCACTATaGATCTCTTCAGAGCTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: GGWPMLPGLHDNFGFVVSMTKAL*ISSELG Trigger: TCCAAGCTCTGAAGAGATCAATAGTGCCTTTGTCAT...GCTAACCACAAAGCCAAAGTTATCATGTAAGCCAGGCAACATAGGCCATCCCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113163.8 ENSMUST00000137977.8 |
||
| CDS-3UTR CAA 90 bp | GGGGGATGGCCTATGTTGCCTGGCTTACATGATAACTTTGGCTTTGTGGTTAGCCATTCTTTGCTGCTCTaGAGAAAGGACAAGCTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: GGWPMLPGLHDNFGFVVSHSLLL*RKDKLE Trigger: TTCAAGCTTGTCCTTTCTCAAGAGCAGCAAAGAATG...GCTAACCACAAAGCCAAAGTTATCATGTAAGCCAGGCAACATAGGCCATCCCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113163.8 ENSMUST00000137977.8 |
||
| CDS-3UTR CAA 90 bp | TTACATGATAACTTTGGCTTTGTGGTTAGCCAGGCTAACAGCAGGGGTCATAAGTTCAGATCTGGATCATaGGGGTTGAAGGGAATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LHDNFGFVVSQANSRGHKFRSGS*GLKGMV Trigger: GACCATTCCCTTCAACCCCAATGATCCAGATCTGAA...CTTATGACCCCTGCTGTTAGCCTGGCTAACCACAAAGCCAAAGTTATCATGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113163.8 ENSMUST00000137977.8 |
||
| CDS TCA 90 bp | CATTCTTTGCTGCTCTTGAGAAAGGACAAGCTTGAAGTTGGAGTATaGTGTGGGCGAGGGTATGACAAAGGCACTATTGATCTCTTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: HSLLLLRKDKLEVGV*CGRGYDKGTIDLFR Trigger: TCTGAAGAGATCAATAGTGCCTTTGTCATACCCTCGCCCACATCATACTCCAACTTCAAGCTTGTCCTTTCTCAAGAGCAGCAAAGAATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033784.13 ENSMUST00000113163.8 ENSMUST00000137977.8 |
||
| CDS-3UTR CAA 90 bp | ACAGAGAAACAAGAATGTGAACAAGAGGAAGATAACATCCAGCCGTGTGTTTTTTCAAAGCGGAGCTTTTaGAGGCAGAGAGCATGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: TEKQECEQEEDNIQPCVFSKRSF*RQRACW Trigger: CCAGCATGCTCTCTGCCTCAAAAAGCTCCGCTTTGA...AAAAACACACGGCTGGATGTTATCTTCCTCTTGTTCACATTCTTGTTTCTCTGT 44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000113163.8 ENSMUST00000137977.8 |
||
| CDS-3UTR CAA 90 bp | ATGATAACTTTGGCTTTGTGGTTAGCCAGGCTAACAGCAGGGGTCATAAGTAAGCCCATAAAGATGTCCTaGCAGGGCTTCATTAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: MITLALWLARLTAGVISKPIKMS*QGFINL Trigger: CAAGTTAATGAAGCCCTGCAAGGACATCTTTATGGG...CTTACTTATGACCCCTGCTGTTAGCCTGGCTAACCACAAAGCCAAAGTTATCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113163.8 ENSMUST00000137977.8 |
||
| CDS-3UTR CAA 90 bp | ACAGAGAAACAAGAATGTGAACAAGAGGAAGATAACATCCAGCCGTGTGTTTTTTCTGGATCATTGGGGTaGAAGGGAATGGTCAGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: TEKQECEQEEDNIQPCVFSGSLG*KGMVRE Trigger: CTCCCTGACCATTCCCTTCAACCCCAATGATCCAGA...AAAAACACACGGCTGGATGTTATCTTCCTCTTGTTCACATTCTTGTTTCTCTGT 44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000113163.8 ENSMUST00000137977.8 |
||
| CDS TCA 90 bp | GAACCCATAAAGATGTCCTTGCAGGGCTTCATTAACTTGCGTTCTTaGGTGTTCATTACAGTTGGAAGTAATAACTTCCTGCCATCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: EPIKMSLQGFINLRS*VFITVGSNNFLPSR Trigger: CCTGGATGGCAGGAAGTTATTACTTCCAACTGTAATGAACACTCAAGAACGCAAGTTAATGAAGCCCTGCAAGGACATCTTTATGGGTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033784.13 ENSMUST00000113163.8 ENSMUST00000137977.8 |
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| CDS-3UTR CAA 90 bp | TTACATGATAACTTTGGCTTTGTGGTTAGCCAGGCTAACAGCAGGGGTCATAAGAAAACAGATGTTCACTaGGAAAGAGCTGAAGGCATG | + |
|
Preference number: 5 (lower is better) Translates to: LHDNFGFVVSQANSRGHKKTDVH*ERAEGM Trigger: CATGCCTTCAGCTCTTTCCAAGTGAACATCTGTTTT...CTTATGACCCCTGCTGTTAGCCTGGCTAACCACAAAGCCAAAGTTATCATGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113163.8 ENSMUST00000137977.8 |
||
| CDS TCA 90 bp | ACTCCCACACTGTTCTTAGCATGTTTTTGGAGAGGTTCAAGATCTTaGGTTGCGGTGCCTTCTTTACCACATCAATCAGGCTATCTAATT | + |
|
Preference number: 5 (lower is better) Translates to: TPTLFLACFWRGSRS*VAVPSLPHQSGYLI Trigger: AATTAGATAGCCTGATTGATGTGGTAAAGAAGGCACCGCAACTCAAGATCTTGAACCTCTCCAAAAACATGCTAAGAACAGTGTGGGAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033784.13 ENSMUST00000113163.8 |
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| CDS TCA 90 bp | GCTTGGATTCCTCACAAAAAGCTGGTCATTCACAATATACATGTTTaGACTGCCAAGGAGAGCAATGAAGATCCTCATAAAGGCACGAAC | + |
|
Preference number: 5 (lower is better) Translates to: AWIPHKKLVIHNIHV*TAKESNEDPHKGTN Trigger: GTTCGTGCCTTTATGAGGATCTTCATTGCTCTCCTTGGCAGTTCAAACATGTATATTGTGAATGACCAGCTTTTTGTGAGGAATCCAAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033784.13 ENSMUST00000113163.8 ENSMUST00000137977.8 |
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| CDS GCA 90 bp | CTTCTGAAAGTACTCATTATGTATCTTATAGCTGATATCCTTCAATaGAGAGGCAATGCGAAAGTCTGGGACAAAGAACTGGATCCGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LLKVLIMYLIADILQ*RGNAKVWDKELDPV Trigger: CACCGGATCCAGTTCTTTGTCCCAGACTTTCGCATTGCCTCTGCATTGAAGGATATCAGCTATAAGATACATAATGAGTACTTTCAGAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033784.13 ENSMUST00000113163.8 ENSMUST00000137977.8 |
||
| CDS-3UTR CAA 90 bp | ATGATAACTTTGGCTTTGTGGTTAGCCAGGCTAACAGCAGGGGTCATAAGTAAGAGGATCATGTGGATGTaGTTTTTCATCAAGTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: MITLALWLARLTAGVISKRIMWM*FFIKSG Trigger: TCCAGACTTGATGAAAAACAACATCCACATGATCCT...CTTACTTATGACCCCTGCTGTTAGCCTGGCTAACCACAAAGCCAAAGTTATCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000113163.8 ENSMUST00000137977.8 |
||
| CDS-3UTR CAA 90 bp | TTACATGATAACTTTGGCTTTGTGGTTAGCCAGGCTAACAGCAGGGGTCATAAGAATTGGAACAGTTTGTaGCTGCTCAAGTTCAAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: LHDNFGFVVSQANSRGHKNWNSL*LLKFKD Trigger: ATCCTTGAACTTGAGCAGCAACAAACTGTTCCAATT...CTTATGACCCCTGCTGTTAGCCTGGCTAACCACAAAGCCAAAGTTATCATGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113163.8 |
||
| CDS-3UTR CAA 90 bp | ATGATAACTTTGGCTTTGTGGTTAGCCAGGCTAACAGCAGGGGTCATAAGTAAGTCTAATTGGAACAGTTaGTTGCTGCTCAAGTTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: MITLALWLARLTAGVISKSNWNS*LLLKFK Trigger: CTTGAACTTGAGCAGCAACAAACTGTTCCAATTAGA...CTTACTTATGACCCCTGCTGTTAGCCTGGCTAACCACAAAGCCAAAGTTATCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113163.8 |
||
| CDS-3UTR CAA 90 bp | ACAGAGAAACAAGAATGTGAACAAGAGGAAGATAACATCCAGCCGTGTGTTTTTGTTCAAGATCTTGAGTaGCGGTGCCTTCTTTACCAC | + |
|
Preference number: 5 (lower is better) Translates to: TEKQECEQEEDNIQPCVFVQDLE*RCLLYH Trigger: GTGGTAAAGAAGGCACCGCAACTCAAGATCTTGAAC...AAAAACACACGGCTGGATGTTATCTTCCTCTTGTTCACATTCTTGTTTCTCTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113163.8 |
||
| CDS-3UTR CAA 90 bp | ATGATAACTTTGGCTTTGTGGTTAGCCAGGCTAACAGCAGGGGTCATAAGTAAGGAGTGTTCATTACAGTaGGAAGTAATAACTTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: MITLALWLARLTAGVISKECSLQ*EVITSC Trigger: GCAGGAAGTTATTACTTCCAACTGTAATGAACACTC...CTTACTTATGACCCCTGCTGTTAGCCTGGCTAACCACAAAGCCAAAGTTATCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113163.8 ENSMUST00000137977.8 |
||
| CDS-3UTR CAA 90 bp | TTACATGATAACTTTGGCTTTGTGGTTAGCCAGGCTAACAGCAGGGGTCATAAGGAGTGTTCATTACAGTaGGAAGTAATAACTTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LHDNFGFVVSQANSRGHKECSLQ*EVITSC Trigger: GCAGGAAGTTATTACTTCCAACTGTAATGAACACTC...CTTATGACCCCTGCTGTTAGCCTGGCTAACCACAAAGCCAAAGTTATCATGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113163.8 ENSMUST00000137977.8 |
||
| CDS-3UTR CAA 90 bp | ACAGAGAAACAAGAATGTGAACAAGAGGAAGATAACATCCAGCCGTGTGTTTTTTTCAGATCTGGATCATaGGGGTTGAAGGGAATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: TEKQECEQEEDNIQPCVFFRSGS*GLKGMV Trigger: GACCATTCCCTTCAACCCCAATGATCCAGATCTGAA...AAAAACACACGGCTGGATGTTATCTTCCTCTTGTTCACATTCTTGTTTCTCTGT 42% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000113163.8 ENSMUST00000137977.8 |
||
| CDS-3UTR CAA 90 bp | TTACATGATAACTTTGGCTTTGTGGTTAGCCAGGCTAACAGCAGGGGTCATAAGTCACAATATACATGTTaGAACTGCCAAGGAGAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: LHDNFGFVVSQANSRGHKSQYTC*NCQGEQ Trigger: TTGCTCTCCTTGGCAGTTCAAACATGTATATTGTGA...CTTATGACCCCTGCTGTTAGCCTGGCTAACCACAAAGCCAAAGTTATCATGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113163.8 ENSMUST00000137977.8 |
||
| CDS-3UTR CAA 90 bp | ACAGAGAAACAAGAATGTGAACAAGAGGAAGATAACATCCAGCCGTGTGTTTTTCCCATAAAGATGTCCTaGCAGGGCTTCATTAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: TEKQECEQEEDNIQPCVFPIKMS*QGFINL Trigger: CAAGTTAATGAAGCCCTGCAAGGACATCTTTATGGG...AAAAACACACGGCTGGATGTTATCTTCCTCTTGTTCACATTCTTGTTTCTCTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113163.8 ENSMUST00000137977.8 |
||
| CDS-3UTR CAA 90 bp | ACAGAGAAACAAGAATGTGAACAAGAGGAAGATAACATCCAGCCGTGTGTTTTTATGACAAAGGCACTATaGATCTCTTCAGAGCTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: TEKQECEQEEDNIQPCVFMTKAL*ISSELG Trigger: TCCAAGCTCTGAAGAGATCAATAGTGCCTTTGTCAT...AAAAACACACGGCTGGATGTTATCTTCCTCTTGTTCACATTCTTGTTTCTCTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113163.8 ENSMUST00000137977.8 |
||
| CDS-3UTR CAA 90 bp | ACAGAGAAACAAGAATGTGAACAAGAGGAAGATAACATCCAGCCGTGTGTTTTTGTTCTTAGCATGTTTTaGGAGAGGTTCAAGATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: TEKQECEQEEDNIQPCVFVLSMF*ERFKIL Trigger: CAAGATCTTGAACCTCTCCAAAAACATGCTAAGAAC...AAAAACACACGGCTGGATGTTATCTTCCTCTTGTTCACATTCTTGTTTCTCTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113163.8 |
||
| CDS-3UTR CAA 90 bp | ACAGAGAAACAAGAATGTGAACAAGAGGAAGATAACATCCAGCCGTGTGTTTTTTCACAATATACATGTTaGAACTGCCAAGGAGAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: TEKQECEQEEDNIQPCVFSQYTC*NCQGEQ Trigger: TTGCTCTCCTTGGCAGTTCAAACATGTATATTGTGA...AAAAACACACGGCTGGATGTTATCTTCCTCTTGTTCACATTCTTGTTTCTCTGT 39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000113163.8 ENSMUST00000137977.8 |
||
| CDS GCA 72 bp | CCAGCTCCCCAGTTCTCCGTCTTCTGTGAACTGCCCTaGTTCTCTCTGTTCAGGTTTGTCATCTCTCTGCGC | + |
|
Preference number: 6 (lower is better) Translates to: PAPQFSVFCELP*FSLFRFVISLR Trigger: GCGCAGAGAGATGACAAACCTGAACAGAGAGAAGCAGGGCAGTTCACAGAAGACGGAGAACTGGGGAGCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033784.13 ENSMUST00000113163.8 ENSMUST00000141310.2 ENSMUST00000150900.8 |
||
| CDS CAA 72 bp | GTCTTGTCATACTTCCTCCCACATGGAACCGTGACCTaGAACCAGCTCCCCAGTTCTCCGTCTTCTGTGAAC | + |
|
Preference number: 6 (lower is better) Translates to: VLSYFLPHGTVT*NQLPSSPSSVN Trigger: GTTCACAGAAGACGGAGAACTGGGGAGCTGGTTCAAGGTCACGGTTCCATGTGGGAGGAAGTATGACAAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000033784.13 ENSMUST00000113163.8 ENSMUST00000137977.8 ENSMUST00000141310.2 ENSMUST00000150900.8 |
||
| CDS CAA 90 bp | GCAGAGGCAATGCGAAAGTCTGGGACAAAGAACTGGATCCGGTGTTaGTCACAATGGAAATCCACAGGTGTGAAGGGCACGCTGCAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: AEAMRKSGTKNWIRC*SQWKSTGVKGTLQR Trigger: CCTTTGCAGCGTGCCCTTCACACCTGTGGATTTCCATTGTGACAAACACCGGATCCAGTTCTTTGTCCCAGACTTTCGCATTGCCTCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033784.13 ENSMUST00000113163.8 ENSMUST00000137977.8 |
||
| CDS CCA 72 bp | TCTGGGACAAAGAACTGGATCCGGTGTTTGTCACAATaGAAATCCACAGGTGTGAAGGGCACGCTGCAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: SGTKNWIRCLSQ*KSTGVKGTLQR Trigger: CCTTTGCAGCGTGCCCTTCACACCTGTGGATTTCCATTGTGACAAACACCGGATCCAGTTCTTTGTCCCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033784.13 ENSMUST00000113163.8 ENSMUST00000137977.8 |
||
| CDS CAA 90 bp | AGTTCTCCGTCTTCTGTGAACTGCCCTGCTTCTCTCTGTTCAGGTTaGTCATCTCTCTGCGCCGTGACATGGATTTGGTCTTCCATATGC | + |
|
Preference number: 6 (lower is better) Translates to: SSPSSVNCPASLCSG*SSLCAVTWIWSSIC Trigger: GCATATGGAAGACCAAATCCATGTCACGGCGCAGAGAGATGACAAACCTGAACAGAGAGAAGCAGGGCAGTTCACAGAAGACGGAGAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033784.13 ENSMUST00000113163.8 ENSMUST00000141310.2 ENSMUST00000150900.8 |
||
| CDS CAA 90 bp | CCAAGGAGAGCAATGAAGATCCTCATAAAGGCACGAACACATTCCTaGGGGGTGCCCTCTTCCTTGAACAACCCACAAACAGAGAAGCAG | + |
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Preference number: 6 (lower is better) Translates to: PRRAMKILIKARTHS*GVPSSLNNPQTEKQ Trigger: CTGCTTCTCTGTTTGTGGGTTGTTCAAGGAAGAGGGCACCCCCAAGGAATGTGTTCGTGCCTTTATGAGGATCTTCATTGCTCTCCTTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033784.13 ENSMUST00000113163.8 ENSMUST00000137977.8 |
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| CDS GCA 72 bp | TGCCCTGCTTCTCTCTGTTCAGGTTTGTCATCTCTCTaGGCCGTGACATGGATTTGGTCTTCCATATGCTCT | + |
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Preference number: 6 (lower is better) Translates to: CPASLCSGLSSL*AVTWIWSSICS Trigger: AGAGCATATGGAAGACCAAATCCATGTCACGGCGCAGAGAGATGACAAACCTGAACAGAGAGAAGCAGGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033784.13 ENSMUST00000113163.8 ENSMUST00000141310.2 ENSMUST00000150900.8 |
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| CDS CCA 72 bp | AGAACAGCTCTCATCTCCAGATTTCCACCATCACTCTaGGCTTTGAAAGGCAGAATCGTGTGCCCAGTATGC | + |
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Preference number: 6 (lower is better) Translates to: RTALISRFPPSL*ALKGRIVCPVC Trigger: GCATACTGGGCACACGATTCTGCCTTTCAAAGCCCAGAGTGATGGTGGAAATCTGGAGATGAGAGCTGTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033784.13 ENSMUST00000113163.8 ENSMUST00000141310.2 ENSMUST00000150900.8 |
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| CDS CAA 72 bp | ATGCGAAAGTCTGGGACAAAGAACTGGATCCGGTGTTaGTCACAATGGAAATCCACAGGTGTGAAGGGCACG | + |
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Preference number: 6 (lower is better) Translates to: MRKSGTKNWIRC*SQWKSTGVKGT Trigger: CGTGCCCTTCACACCTGTGGATTTCCATTGTGACAAACACCGGATCCAGTTCTTTGTCCCAGACTTTCGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033784.13 ENSMUST00000113163.8 ENSMUST00000137977.8 |
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| CDS CAA 72 bp | GCAATGAAGATCCTCATAAAGGCACGAACACATTCCTaGGGGGTGCCCTCTTCCTTGAACAACCCACAAACA | + |
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Preference number: 6 (lower is better) Translates to: AMKILIKARTHS*GVPSSLNNPQT Trigger: TGTTTGTGGGTTGTTCAAGGAAGAGGGCACCCCCAAGGAATGTGTTCGTGCCTTTATGAGGATCTTCATTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033784.13 ENSMUST00000113163.8 ENSMUST00000137977.8 |
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| CDS TCA 72 bp | ACTCCTATGTTGCCCAACATAAGGTGTGTGTCTTACTaGCGGGTTCCAGAGAACAGCTCTCATCTCCAGATT | + |
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Preference number: 6 (lower is better) Translates to: TPMLPNIRCVSY*RVPENSSHLQI Trigger: AATCTGGAGATGAGAGCTGTTCTCTGGAACCCGTCAGTAAGACACACACCTTATGTTGGGCAACATAGGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033784.13 ENSMUST00000113163.8 ENSMUST00000141310.2 ENSMUST00000150900.8 |
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| CDS GCA 72 bp | GAAGAAACCCTGTCTTTCTTTCTTCCCATGGGGCTTTaGCAGGCATTAGTTGTTCCTGTGTATCTGAAGGAC | + |
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Preference number: 6 (lower is better) Translates to: EETLSFFLPMGL*QALVVPVYLKD Trigger: GTCCTTCAGATACACAGGAACAACTAATGCCTGGCAAAGCCCCATGGGAAGAAAGAAAGACAGGGTTTCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033784.13 ENSMUST00000113163.8 |
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| CDS CCA 72 bp | AATGCAGAGGCAATGCGAAAGTCTGGGACAAAGAACTaGATCCGGTGTTTGTCACAATGGAAATCCACAGGT | + |
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Preference number: 6 (lower is better) Translates to: NAEAMRKSGTKN*IRCLSQWKSTG Trigger: ACCTGTGGATTTCCATTGTGACAAACACCGGATCCAGTTCTTTGTCCCAGACTTTCGCATTGCCTCTGCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033784.13 ENSMUST00000113163.8 ENSMUST00000137977.8 |
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| CDS CAA 72 bp | GGAAGAAACCCTGTCTTTCTTTCTTCCCATGGGGCTTaGCCAGGCATTAGTTGTTCCTGTGTATCTGAAGGA | + |
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Preference number: 6 (lower is better) Translates to: GRNPVFLSSHGA*PGISCSCVSEG Trigger: TCCTTCAGATACACAGGAACAACTAATGCCTGGCAAAGCCCCATGGGAAGAAAGAAAGACAGGGTTTCTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033784.13 ENSMUST00000113163.8 |
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| CDS TCA 72 bp | CTGCTCTTGAGAAAGGACAAGCTTGAAGTTGGAGTATaGTGTGGGCGAGGGTATGACAAAGGCACTATTGAT | + |
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Preference number: 6 (lower is better) Translates to: LLLRKDKLEVGV*CGRGYDKGTID Trigger: ATCAATAGTGCCTTTGTCATACCCTCGCCCACATCATACTCCAACTTCAAGCTTGTCCTTTCTCAAGAGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033784.13 ENSMUST00000113163.8 ENSMUST00000137977.8 |
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| CDS CAA 72 bp | GGGGAAATCCCCTCAGACACTCCACAATATCTTGTTTaGTGTACTTCAGTAGCTGCCTCTGAATGTGGAACT | + |
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Preference number: 6 (lower is better) Translates to: GEIPSDTPQYLV*CTSVAASECGT Trigger: AGTTCCACATTCAGAGGCAGCTACTGAAGTACACAAAACAAGATATTGTGGAGTGTCTGAGGGGATTTCCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033784.13 ENSMUST00000113163.8 ENSMUST00000137977.8 |
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| CDS CCA 72 bp | TTCATCCTTGAAGTAGACATACATGCTATTCAGATCTaGATCATTGGGGTTGAAGGGAATGGTCAGGGAGAA | + |
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Preference number: 6 (lower is better) Translates to: FILEVDIHAIQI*IIGVEGNGQGE Trigger: TTCTCCCTGACCATTCCCTTCAACCCCAATGATCCAGATCTGAATAGCATGTATGTCTACTTCAAGGATGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033784.13 ENSMUST00000113163.8 ENSMUST00000137977.8 |
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| CDS CAA 90 bp | GCCTTCTTTACCACATCAATCAGGCTATCTAATTGGAACAGTTTGTaGCTGCTCAAGTTCAAGGATAACAGCTTAGGAAAATTCTCTTGG | + |
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Preference number: 6 (lower is better) Translates to: AFFTTSIRLSNWNSL*LLKFKDNSLGKFSW Trigger: CCAAGAGAATTTTCCTAAGCTGTTATCCTTGAACTTGAGCAGCAACAAACTGTTCCAATTAGATAGCCTGATTGATGTGGTAAAGAAGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033784.13 ENSMUST00000113163.8 |
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| CDS CAA 90 bp | GGTGCCTTCTTTACCACATCAATCAGGCTATCTAATTGGAACAGTTaGTTGCTGCTCAAGTTCAAGGATAACAGCTTAGGAAAATTCTCT | + |
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Preference number: 6 (lower is better) Translates to: GAFFTTSIRLSNWNS*LLLKFKDNSLGKFS Trigger: AGAGAATTTTCCTAAGCTGTTATCCTTGAACTTGAGCAGCAACAAACTGTTCCAATTAGATAGCCTGATTGATGTGGTAAAGAAGGCACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033784.13 ENSMUST00000113163.8 |
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| CDS GCA 72 bp | GTACTCATTATGTATCTTATAGCTGATATCCTTCAATaGAGAGGCAATGCGAAAGTCTGGGACAAAGAACTG | + |
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Preference number: 6 (lower is better) Translates to: VLIMYLIADILQ*RGNAKVWDKEL Trigger: CAGTTCTTTGTCCCAGACTTTCGCATTGCCTCTGCATTGAAGGATATCAGCTATAAGATACATAATGAGTAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033784.13 ENSMUST00000113163.8 ENSMUST00000137977.8 |
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| CDS CAA 72 bp | GCTTCATTAACTTGCGTTCTTGAGTGTTCATTACAGTaGGAAGTAATAACTTCCTGCCATCCAGGTATGACA | + |
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Preference number: 6 (lower is better) Translates to: ASLTCVLECSLQ*EVITSCHPGMT Trigger: TGTCATACCTGGATGGCAGGAAGTTATTACTTCCAACTGTAATGAACACTCAAGAACGCAAGTTAATGAAGC 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033784.13 ENSMUST00000113163.8 ENSMUST00000137977.8 |
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| CDS CAA 72 bp | ACCACATCAATCAGGCTATCTAATTGGAACAGTTTGTaGCTGCTCAAGTTCAAGGATAACAGCTTAGGAAAA | + |
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Preference number: 6 (lower is better) Translates to: TTSIRLSNWNSL*LLKFKDNSLGK Trigger: TTTTCCTAAGCTGTTATCCTTGAACTTGAGCAGCAACAAACTGTTCCAATTAGATAGCCTGATTGATGTGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033784.13 ENSMUST00000113163.8 |
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| CDS CAA 72 bp | TTTACCACATCAATCAGGCTATCTAATTGGAACAGTTaGTTGCTGCTCAAGTTCAAGGATAACAGCTTAGGA | + |
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Preference number: 6 (lower is better) Translates to: FTTSIRLSNWNS*LLLKFKDNSLG Trigger: TCCTAAGCTGTTATCCTTGAACTTGAGCAGCAACAAACTGTTCCAATTAGATAGCCTGATTGATGTGGTAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033784.13 ENSMUST00000113163.8 |
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