Pregenerated sensors for NXF2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000009941Ensembl transcript IDs: ENSMUST00000010085.4, ENSMUST00000113187.8, ENSMUST00000113189.8
Found 156 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAGAGGGGGTTATATTACTTGGCCTACATGTTAACTTTTGCTTCTTaGTCAGAAAGGCCTCTCTCTATTCCCAGGTGTGGGAAAGGCCTT | + |
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Preference number: 1 (lower is better) Translates to: ERGLYYLAYMLTFAS*SERPLSIPRCGKGL Trigger: AAGGCCTTTCCCACACCTGGGAATAGAGAGAGGCCTTTCTGACCAAGAAGCAAAAGTTAACATGTAGGCCAAGTAATATAACCCCCTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
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| 3UTR-3UTR CCA 90 bp | GGGTTATATTACTTGGCCTACATGTTAACTTTTGCTTCTTGGTCAGAAAGGCCTCTCTATTCCCAGGTGTaGGAAAGGCCTTATAAAGGG | + |
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Preference number: 2 (lower is better) Translates to: GLYYLAYMLTFASWSERPLYSQV*ERPYKG Trigger: CCCTTTATAAGGCCTTTCCCACACCTGGGAATAGAG...AGGCCTTTCTGACCAAGAAGCAAAAGTTAACATGTAGGCCAAGTAATATAACCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
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| 3UTR-3UTR GCA 90 bp | ATTATGAAATCACAAACAACTTTGGAGGGAGACAGAAAAATTGCCAATGTGGGGCTACATGTTAACTTTTaGTTCTTGGTCAGAAAGGCC | + |
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Preference number: 2 (lower is better) Translates to: IMKSQTTLEGDRKIANVGLHVNF*FLVRKA Trigger: GGCCTTTCTGACCAAGAAGCAAAAGTTAACATGTAG...CCCCACATTGGCAATTTTTCTGTCTCCCTCCAAAGTTGTTTGTGATTTCATAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
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| 3UTR CCA 72 bp | TTATATTACTTGGCCTACATGTTAACTTTTGCTTCTTaGTCAGAAAGGCCTCTCTCTATTCCCAGGTGTGGG | + |
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Preference number: 3 (lower is better) Translates to: LYYLAYMLTFAS*SERPLSIPRCG Trigger: CCCACACCTGGGAATAGAGAGAGGCCTTTCTGACCAAGAAGCAAAAGTTAACATGTAGGCCAAGTAATATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
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| 3UTR CCA 72 bp | AAACAACTTTGGAGGGAGACAGAAAAATTGCCAATGTaGGGAGAGGGGGTTATATTACTTGGCCTACATGTT | + |
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Preference number: 3 (lower is better) Translates to: KQLWRETEKLPM*GEGVILLGLHV Trigger: AACATGTAGGCCAAGTAATATAACCCCCTCTCCCCACATTGGCAATTTTTCTGTCTCCCTCCAAAGTTGTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
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| 3UTR-3UTR CAA 90 bp | TATGAAATCACAAACAACTTTGGAGGGAGACAGAAAAATTGCCAATGTGGGGAGGTTAACTTTTGCTTCTaGGTCAGAAAGGCCTCTCTC | + |
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Preference number: 3 (lower is better) Translates to: YEITNNFGGRQKNCQCGEVNFCF*VRKASL Trigger: GAGAGAGGCCTTTCTGACCAAGAAGCAAAAGTTAAC...CTCCCCACATTGGCAATTTTTCTGTCTCCCTCCAAAGTTGTTTGTGATTTCATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
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| 3UTR-3UTR CAA 90 bp | TATGAAATCACAAACAACTTTGGAGGGAGACAGAAAAATTGCCAATGTGGGGAGAGGGGGTTATATTACTaGGCCTACATGTTAACTTTT | + |
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Preference number: 3 (lower is better) Translates to: YEITNNFGGRQKNCQCGERGLYY*AYMLTF Trigger: AAAAGTTAACATGTAGGCCAAGTAATATAACCCCCT...CTCCCCACATTGGCAATTTTTCTGTCTCCCTCCAAAGTTGTTTGTGATTTCATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
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| CDS-3UTR TCA 90 bp | GCTTCTTGGTCAGAAAGGCCTCTCTCTATTCCCAGGTGTGGGAAAGGCCTTATAAGGTCCTTGCCATCCTaGGGATTTCCTGTCGGTACT | + |
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Preference number: 4 (lower is better) Translates to: ASWSERPLSIPRCGKGLIRSLPS*GFPVGT Trigger: AGTACCGACAGGAAATCCTCAGGATGGCAAGGACCT...TATAAGGCCTTTCCCACACCTGGGAATAGAGAGAGGCCTTTCTGACCAAGAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
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| CDS-3UTR TCA 90 bp | TGGTCAGAAAGGCCTCTCTCTATTCCCAGGTGTGGGAAAGGCCTTATAAAGGGAAAGTCCTTGCCATCCTaGGGATTTCCTGTCGGTACT | + |
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Preference number: 4 (lower is better) Translates to: WSERPLSIPRCGKGLIKGKSLPS*GFPVGT Trigger: AGTACCGACAGGAAATCCTCAGGATGGCAAGGACTT...TCCCTTTATAAGGCCTTTCCCACACCTGGGAATAGAGAGAGGCCTTTCTGACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
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| CDS-3UTR TCA 90 bp | TGGTCAGAAAGGCCTCTCTCTATTCCCAGGTGTGGGAAAGGCCTTATAAAGGGAAGGTCCTTGCCATCCTaGGGATTTCCTGTTGGTACT | + |
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Preference number: 4 (lower is better) Translates to: WSERPLSIPRCGKGLIKGRSLPS*GFPVGT Trigger: AGTACCAACAGGAAATCCTCAGGATGGCAAGGACCT...TCCCTTTATAAGGCCTTTCCCACACCTGGGAATAGAGAGAGGCCTTTCTGACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
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| CDS-3UTR TCA 90 bp | TTCTTGGTCAGAAAGGCCTCTCTCTATTCCCAGGTGTGGGAAAGGCCTTATAAACATTCTGGAGAGCAGTaGAGGCCTCACCAGCTTTGG | + |
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Preference number: 4 (lower is better) Translates to: FLVRKASLYSQVWERPYKHSGEQ*RPHQLW Trigger: CCAAAGCTGGTGAGGCCTTCACTGCTCTCCAGAATG...TTTATAAGGCCTTTCCCACACCTGGGAATAGAGAGAGGCCTTTCTGACCAAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
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| CDS-3UTR GCA 90 bp | TGGTCAGAAAGGCCTCTCTCTATTCCCAGGTGTGGGAAAGGCCTTATAAAGGGAGATCCAAGAAGCAGTTaGAGAAGGGGTTCCCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: WSERPLSIPRCGKGLIKGDPRSS*RRGSLP Trigger: TGGAAGGGAACCCCTTCTGCAACTGCTTCTTGGATC...TCCCTTTATAAGGCCTTTCCCACACCTGGGAATAGAGAGAGGCCTTTCTGACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
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| CDS-3UTR GCA 90 bp | TGGTCAGAAAGGCCTCTCTCTATTCCCAGGTGTGGGAAAGGCCTTATAAAGGGATGTTACAGCTTTCCTTaGATGGTTGCGGGACCTCGA | + |
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Preference number: 4 (lower is better) Translates to: WSERPLSIPRCGKGLIKGCYSFP*MVAGPR Trigger: TCGAGGTCCCGCAACCATGCAAGGAAAGCTGTAACA...TCCCTTTATAAGGCCTTTCCCACACCTGGGAATAGAGAGAGGCCTTTCTGACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
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| CDS-3UTR TCA 90 bp | GCTTCTTGGTCAGAAAGGCCTCTCTCTATTCCCAGGTGTGGGAAAGGCCTTATAGTGCAGGCAATGAGGTaGAGGCCTTTTGTATCTCTT | + |
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Preference number: 4 (lower is better) Translates to: ASWSERPLSIPRCGKGLIVQAMR*RPFVSL Trigger: AAGAGATACAAAAGGCCTTCACCTCATTGCCTGCAC...TATAAGGCCTTTCCCACACCTGGGAATAGAGAGAGGCCTTTCTGACCAAGAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
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| CDS-3UTR TCA 90 bp | AAATCACAAACAACTTTGGAGGGAGACAGAAAAATTGCCAATGTGGGGAGAGGGCATTCTGGAGAGCAGTaGAGGCCTCACCAGCTTTGG | + |
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Preference number: 4 (lower is better) Translates to: KSQTTLEGDRKIANVGRGHSGEQ*RPHQLW Trigger: CCAAAGCTGGTGAGGCCTTCACTGCTCTCCAGAATG...CCCTCTCCCCACATTGGCAATTTTTCTGTCTCCCTCCAAAGTTGTTTGTGATTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
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| CDS-3UTR GCA 90 bp | TGGTCAGAAAGGCCTCTCTCTATTCCCAGGTGTGGGAAAGGCCTTATAAAGGGACGCATGCTTGAGTCTTaGTGCCTCTTTAGATCTCTG | + |
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Preference number: 4 (lower is better) Translates to: WSERPLSIPRCGKGLIKGRMLES*CLFRSL Trigger: CAGAGATCTAAAGAGGCAGCAAGACTCAAGCATGCG...TCCCTTTATAAGGCCTTTCCCACACCTGGGAATAGAGAGAGGCCTTTCTGACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
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| CDS-3UTR TCA 90 bp | GGGAAAGGCCTTATAAAGGGAAATAATGTGGATGAGGAGGAATACTCTATCCACCATTCTGGAGAGCAGTaGAGGCCTCACCAGCTTTGG | + |
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Preference number: 4 (lower is better) Translates to: GKGLIKGNNVDEEEYSIHHSGEQ*RPHQLW Trigger: CCAAAGCTGGTGAGGCCTTCACTGCTCTCCAGAATG...GTGGATAGAGTATTCCTCCTCATCCACATTATTTCCCTTTATAAGGCCTTTCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
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| CDS-3UTR GCA 90 bp | TGGTCAGAAAGGCCTCTCTCTATTCCCAGGTGTGGGAAAGGCCTTATAAAGGGAGTACTATTAGGTCCTTaGCATCCTGAGGATTTCCTG | + |
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Preference number: 4 (lower is better) Translates to: WSERPLSIPRCGKGLIKGVLLGP*HPEDFL Trigger: CAGGAAATCCTCAGGATGGCAAGGACCTAATAGTAC...TCCCTTTATAAGGCCTTTCCCACACCTGGGAATAGAGAGAGGCCTTTCTGACCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
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| CDS-3UTR CCA 90 bp | GCTTCTTGGTCAGAAAGGCCTCTCTCTATTCCCAGGTGTGGGAAAGGCCTTATACAAGTTGTTCAGGTTTaGGTCACTGACATCGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: ASWSERPLSIPRCGKGLIQVVQV*VTDIER Trigger: CCTTTCGATGTCAGTGACCCAAACCTGAACAACTTG...TATAAGGCCTTTCCCACACCTGGGAATAGAGAGAGGCCTTTCTGACCAAGAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
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| CDS-3UTR CCA 90 bp | TGGTCAGAAAGGCCTCTCTCTATTCCCAGGTGTGGGAAAGGCCTTATAAAGGGAGTATCTCTTTGGGACTaGCATTCCTCACAATCAGCT | + |
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Preference number: 4 (lower is better) Translates to: WSERPLSIPRCGKGLIKGVSLWD*HSSQSA Trigger: AGCTGATTGTGAGGAATGCCAGTCCCAAAGAGATAC...TCCCTTTATAAGGCCTTTCCCACACCTGGGAATAGAGAGAGGCCTTTCTGACCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
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| CDS-3UTR CCA 90 bp | TTCTTGGTCAGAAAGGCCTCTCTCTATTCCCAGGTGTGGGAAAGGCCTTATAAAATCTTGCCCTCATTCTaGAGAGCAGTGAAGGCCTCA | + |
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Preference number: 4 (lower is better) Translates to: FLVRKASLYSQVWERPYKILPSF*RAVKAS Trigger: TGAGGCCTTCACTGCTCTCCAGAATGAGGGCAAGAT...TTTATAAGGCCTTTCCCACACCTGGGAATAGAGAGAGGCCTTTCTGACCAAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
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| CDS-3UTR CCA 90 bp | TCAGAAAGGCCTCTCTCTATTCCCAGGTGTGGGAAAGGCCTTATAAAGGGAAATATCTTGCCCTCATTCTaGAGAGCAGTGAAGGCCTCA | + |
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Preference number: 4 (lower is better) Translates to: SERPLSIPRCGKGLIKGNILPSF*RAVKAS Trigger: TGAGGCCTTCACTGCTCTCCAGAATGAGGGCAAGAT...ATTTCCCTTTATAAGGCCTTTCCCACACCTGGGAATAGAGAGAGGCCTTTCTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
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| CDS-3UTR TCA 90 bp | GGGAAAGGCCTTATAAAGGGAAATAATGTGGATGAGGAGGAATACTCTATCCACAGGTCCTTGCCATCCTaGGGATTTCCTGTCGGTACT | + |
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Preference number: 4 (lower is better) Translates to: GKGLIKGNNVDEEEYSIHRSLPS*GFPVGT Trigger: AGTACCGACAGGAAATCCTCAGGATGGCAAGGACCT...GTGGATAGAGTATTCCTCCTCATCCACATTATTTCCCTTTATAAGGCCTTTCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
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| CDS-3UTR TCA 90 bp | AAATCACAAACAACTTTGGAGGGAGACAGAAAAATTGCCAATGTGGGGAGAGGGAGGTCCTTGCCATCCTaGGGATTTCCTGTTGGTACT | + |
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Preference number: 4 (lower is better) Translates to: KSQTTLEGDRKIANVGRGRSLPS*GFPVGT Trigger: AGTACCAACAGGAAATCCTCAGGATGGCAAGGACCT...CCCTCTCCCCACATTGGCAATTTTTCTGTCTCCCTCCAAAGTTGTTTGTGATTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
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| CDS-3UTR TCA 90 bp | TGGTCAGAAAGGCCTCTCTCTATTCCCAGGTGTGGGAAAGGCCTTATAAAGGGAGAGCAAAGATCATGCTaGGTTTTGGGTAACAAGCTA | + |
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Preference number: 4 (lower is better) Translates to: WSERPLSIPRCGKGLIKGEQRSC*VLGNKL Trigger: TAGCTTGTTACCCAAAACTCAGCATGATCTTTGCTC...TCCCTTTATAAGGCCTTTCCCACACCTGGGAATAGAGAGAGGCCTTTCTGACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
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| CDS-3UTR GCA 90 bp | GAAAGGCCTCTCTCTATTCCCAGGTGTGGGAAAGGCCTTATAAAGGGAAATAATTGTTACAGCTTTCCTTaGATGGTTGCGGGACCTCGA | + |
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Preference number: 4 (lower is better) Translates to: ERPLSIPRCGKGLIKGNNCYSFP*MVAGPR Trigger: TCGAGGTCCCGCAACCATGCAAGGAAAGCTGTAACA...ATTATTTCCCTTTATAAGGCCTTTCCCACACCTGGGAATAGAGAGAGGCCTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
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| CDS-3UTR GCA 90 bp | TTGGTCAGAAAGGCCTCTCTCTATTCCCAGGTGTGGGAAAGGCCTTATAAAGGGGACTTCACCATTTCCTaGTGTTCTTCAGAGAGCAAA | + |
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Preference number: 4 (lower is better) Translates to: LVRKASLYSQVWERPYKGDFTIS*CSSESK Trigger: TTTGCTCTCTGAAGAACAGCAGGAAATGGTGAAGTC...CCCTTTATAAGGCCTTTCCCACACCTGGGAATAGAGAGAGGCCTTTCTGACCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
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| CDS-3UTR CCA 90 bp | TTGGTCAGAAAGGCCTCTCTCTATTCCCAGGTGTGGGAAAGGCCTTATAAAGGGTCTTCTGAACAAACATaGAAGACCTGCCTTGCAGAT | + |
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Preference number: 4 (lower is better) Translates to: LVRKASLYSQVWERPYKGSSEQT*KTCLAD Trigger: ATCTGCAAGGCAGGTCTTCCATGTTTGTTCAGAAGA...CCCTTTATAAGGCCTTTCCCACACCTGGGAATAGAGAGAGGCCTTTCTGACCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010085.4 ENSMUST00000113189.8 |
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| CDS-3UTR TCA 90 bp | TTCTTGGTCAGAAAGGCCTCTCTCTATTCCCAGGTGTGGGAAAGGCCTTATAAATTCCACTGGGAATTGTaGCCTTGTACCATTTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: FLVRKASLYSQVWERPYKFHWEL*PCTISP Trigger: AGGAGAAATGGTACAAGGTCACAATTCCCAGTGGAA...TTTATAAGGCCTTTCCCACACCTGGGAATAGAGAGAGGCCTTTCTGACCAAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
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| CDS-3UTR TCA 90 bp | TTGGTCAGAAAGGCCTCTCTCTATTCCCAGGTGTGGGAAAGGCCTTATAAAGGGCCTTCTCCAATTCCGTaGATGACTTCAGTTTATTTC | + |
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Preference number: 4 (lower is better) Translates to: LVRKASLYSQVWERPYKGPSPIP*MTSVYF Trigger: GAAATAAACTGAAGTCATTCACGGAATTGGAGAAGG...CCCTTTATAAGGCCTTTCCCACACCTGGGAATAGAGAGAGGCCTTTCTGACCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
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| CDS-3UTR TCA 90 bp | TATGAAATCACAAACAACTTTGGAGGGAGACAGAAAAATTGCCAATGTGGGGAGAGGTCCTTGCCATCCTaGGGATTTCCTGTCGGTACT | + |
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Preference number: 4 (lower is better) Translates to: YEITNNFGGRQKNCQCGERSLPS*GFPVGT Trigger: AGTACCGACAGGAAATCCTCAGGATGGCAAGGACCT...CTCCCCACATTGGCAATTTTTCTGTCTCCCTCCAAAGTTGTTTGTGATTTCATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
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| CDS-3UTR GCA 90 bp | GGAGAGGGGGTTATATTACTTGGCCTACATGTTAACTTTTGCTTCTTGGTCAGATGTTACAGCTTTCCTTaGATGGTTGCGGGACCTCGA | + |
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Preference number: 4 (lower is better) Translates to: GEGVILLGLHVNFCFLVRCYSFP*MVAGPR Trigger: TCGAGGTCCCGCAACCATGCAAGGAAAGCTGTAACA...TCTGACCAAGAAGCAAAAGTTAACATGTAGGCCAAGTAATATAACCCCCTCTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
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| CDS-3UTR GCA 90 bp | AAATCACAAACAACTTTGGAGGGAGACAGAAAAATTGCCAATGTGGGGAGAGGGCGCATGCTTGAGTCTTaGTGCCTCTTTAGATCTCTG | + |
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Preference number: 4 (lower is better) Translates to: KSQTTLEGDRKIANVGRGRMLES*CLFRSL Trigger: CAGAGATCTAAAGAGGCAGCAAGACTCAAGCATGCG...CCCTCTCCCCACATTGGCAATTTTTCTGTCTCCCTCCAAAGTTGTTTGTGATTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
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| CDS-3UTR CCA 90 bp | TCAGAAAGGCCTCTCTCTATTCCCAGGTGTGGGAAAGGCCTTATAAAGGGAAATCAAGTTGTTCAGGTTTaGGTCACTGACATCGAAAGG | + |
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Preference number: 4 (lower is better) Translates to: SERPLSIPRCGKGLIKGNQVVQV*VTDIER Trigger: CCTTTCGATGTCAGTGACCCAAACCTGAACAACTTG...ATTTCCCTTTATAAGGCCTTTCCCACACCTGGGAATAGAGAGAGGCCTTTCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
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| CDS-3UTR CCA 90 bp | GGCCTTATAAAGGGAAATAATGTGGATGAGGAGGAATACTCTATCCACAGGACAATCTTGCCCTCATTCTaGAGAGCAGTGAAGGCCTCA | + |
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Preference number: 4 (lower is better) Translates to: GLIKGNNVDEEEYSIHRTILPSF*RAVKAS Trigger: TGAGGCCTTCACTGCTCTCCAGAATGAGGGCAAGAT...TGTCCTGTGGATAGAGTATTCCTCCTCATCCACATTATTTCCCTTTATAAGGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
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| CDS-3UTR CCA 90 bp | TTGGTCAGAAAGGCCTCTCTCTATTCCCAGGTGTGGGAAAGGCCTTATAAAGGGTTTGAAGAATTCCTTTaGGATCTTGCCCTCATTCTG | + |
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Preference number: 4 (lower is better) Translates to: LVRKASLYSQVWERPYKGFEEFL*DLALIL Trigger: CAGAATGAGGGCAAGATCCCAAAGGAATTCTTCAAA...CCCTTTATAAGGCCTTTCCCACACCTGGGAATAGAGAGAGGCCTTTCTGACCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
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| CDS-3UTR TCA 90 bp | GGCCTTATAAAGGGAAATAATGTGGATGAGGAGGAATACTCTATCCACAGGACACACAAATCCTGTAGCTaGCATCCTTCAATGCAGAGG | + |
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Preference number: 4 (lower is better) Translates to: GLIKGNNVDEEEYSIHRTHKSCS*HPSMQR Trigger: CCTCTGCATTGAAGGATGTCAGCTACAGGATTTGTG...TGTCCTGTGGATAGAGTATTCCTCCTCATCCACATTATTTCCCTTTATAAGGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
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| CDS-3UTR TCA 90 bp | TTGGTCAGAAAGGCCTCTCTCTATTCCCAGGTGTGGGAAAGGCCTTATAAAGGGGTACTCCATTTGTTCTaGTGTAAACTTGTTTTGCAC | + |
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Preference number: 4 (lower is better) Translates to: LVRKASLYSQVWERPYKGVLHLF*CKLVLH Trigger: GTGCAAAACAAGTTTACATCAGAACAAATGGAGTAC...CCCTTTATAAGGCCTTTCCCACACCTGGGAATAGAGAGAGGCCTTTCTGACCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
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| CDS-3UTR TCA 90 bp | TGGTCAGAAAGGCCTCTCTCTATTCCCAGGTGTGGGAAAGGCCTTATAAAGGGACTTATATACTCAAAATaGTCCAAGAAGCAGTTGCAG | + |
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Preference number: 4 (lower is better) Translates to: WSERPLSIPRCGKGLIKGLIYSK*SKKQLQ Trigger: CTGCAACTGCTTCTTGGATCATTTTGAGTATATAAG...TCCCTTTATAAGGCCTTTCCCACACCTGGGAATAGAGAGAGGCCTTTCTGACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
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| CDS-3UTR TCA 90 bp | GGGTTATATTACTTGGCCTACATGTTAACTTTTGCTTCTTGGTCAGAAAGGCCTAAGTCCTTGCCATCCTaGGGATTTCCTGTCGGTACT | + |
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Preference number: 4 (lower is better) Translates to: GLYYLAYMLTFASWSERPKSLPS*GFPVGT Trigger: AGTACCGACAGGAAATCCTCAGGATGGCAAGGACTT...AGGCCTTTCTGACCAAGAAGCAAAAGTTAACATGTAGGCCAAGTAATATAACCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
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| CDS-3UTR TCA 90 bp | TATGAAATCACAAACAACTTTGGAGGGAGACAGAAAAATTGCCAATGTGGGGAGAGGTCCTTGCCATCCTaGGGATTTCCTGTTGGTACT | + |
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Preference number: 4 (lower is better) Translates to: YEITNNFGGRQKNCQCGERSLPS*GFPVGT Trigger: AGTACCAACAGGAAATCCTCAGGATGGCAAGGACCT...CTCCCCACATTGGCAATTTTTCTGTCTCCCTCCAAAGTTGTTTGTGATTTCATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
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| CDS-3UTR GCA 90 bp | GCTTCTTGGTCAGAAAGGCCTCTCTCTATTCCCAGGTGTGGGAAAGGCCTTATAGTACTATTAGGCCCTTaGCATTCTGAAGATTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: ASWSERPLSIPRCGKGLIVLLGP*HSEDFF Trigger: AAAGAAATCTTCAGAATGGCAAGGGCCTAATAGTAC...TATAAGGCCTTTCCCACACCTGGGAATAGAGAGAGGCCTTTCTGACCAAGAAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
||
| CDS-3UTR GCA 90 bp | TCAGAAAGGCCTCTCTCTATTCCCAGGTGTGGGAAAGGCCTTATAAAGGGAAATGTACTATTAAGTCCTTaGCATCCTGAGGATTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SERPLSIPRCGKGLIKGNVLLSP*HPEDFL Trigger: CAGGAAATCCTCAGGATGGCAAGGACTTAATAGTAC...ATTTCCCTTTATAAGGCCTTTCCCACACCTGGGAATAGAGAGAGGCCTTTCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
||
| CDS-3UTR GCA 90 bp | TTCTTGGTCAGAAAGGCCTCTCTCTATTCCCAGGTGTGGGAAAGGCCTTATAAAGTACTATTAAGTCCTTaGCATCCTGAGGATTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: FLVRKASLYSQVWERPYKVLLSP*HPEDFL Trigger: CAGGAAATCCTCAGGATGGCAAGGACTTAATAGTAC...TTTATAAGGCCTTTCCCACACCTGGGAATAGAGAGAGGCCTTTCTGACCAAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
||
| CDS-3UTR GCA 90 bp | AAATCACAAACAACTTTGGAGGGAGACAGAAAAATTGCCAATGTGGGGAGAGGGGTACTATTAGGTCCTTaGCATCCTGAGGATTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: KSQTTLEGDRKIANVGRGVLLGP*HPEDFL Trigger: CAGGAAATCCTCAGGATGGCAAGGACCTAATAGTAC...CCCTCTCCCCACATTGGCAATTTTTCTGTCTCCCTCCAAAGTTGTTTGTGATTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
||
| CDS-3UTR GCA 90 bp | GAAAGGCCTCTCTCTATTCCCAGGTGTGGGAAAGGCCTTATAAAGGGAAATAATGTACTATTAGGTCCTTaGCATCCTGAGGATTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ERPLSIPRCGKGLIKGNNVLLGP*HPEDFL Trigger: CAGGAAATCCTCAGGATGGCAAGGACCTAATAGTAC...ATTATTTCCCTTTATAAGGCCTTTCCCACACCTGGGAATAGAGAGAGGCCTTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
||
| CDS-3UTR GCA 90 bp | GGGAAAGGCCTTATAAAGGGAAATAATGTGGATGAGGAGGAATACTCTATCCACCGCATGCTTGAGTCTTaGTGCCTCTTTAGATCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GKGLIKGNNVDEEEYSIHRMLES*CLFRSL Trigger: CAGAGATCTAAAGAGGCAGCAAGACTCAAGCATGCG...GTGGATAGAGTATTCCTCCTCATCCACATTATTTCCCTTTATAAGGCCTTTCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
||
| CDS-3UTR TCA 90 bp | GGGAAAGGCCTTATAAAGGGAAATAATGTGGATGAGGAGGAATACTCTATCCACTTCCACTGGGAATTGTaGCCTTGTACCATTTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GKGLIKGNNVDEEEYSIHFHWEL*PCTISP Trigger: AGGAGAAATGGTACAAGGTCACAATTCCCAGTGGAA...GTGGATAGAGTATTCCTCCTCATCCACATTATTTCCCTTTATAAGGCCTTTCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
||
| CDS-3UTR TCA 90 bp | TTCTTGGTCAGAAAGGCCTCTCTCTATTCCCAGGTGTGGGAAAGGCCTTATAAACCTTCTCCAATTCCGTaGATGACTTCAGTTTATTTC | + |
|
Preference number: 4 (lower is better) Translates to: FLVRKASLYSQVWERPYKPSPIP*MTSVYF Trigger: GAAATAAACTGAAGTCATTCACGGAATTGGAGAAGG...TTTATAAGGCCTTTCCCACACCTGGGAATAGAGAGAGGCCTTTCTGACCAAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
||
| CDS-3UTR TCA 90 bp | GAAAGGCCTCTCTCTATTCCCAGGTGTGGGAAAGGCCTTATAAAGGGAAATAATGAGCAAAGATCATGCTaGGTTTTGGGTAACAAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: ERPLSIPRCGKGLIKGNNEQRSC*VLGNKL Trigger: TAGCTTGTTACCCAAAACTCAGCATGATCTTTGCTC...ATTATTTCCCTTTATAAGGCCTTTCCCACACCTGGGAATAGAGAGAGGCCTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
||
| CDS-3UTR TCA 90 bp | AAAGGCCTTATAAAGGGAAATAATGTGGATGAGGAGGAATACTCTATCCACAGGGTGCAGGCAATGAGGTaGAGGCCTTTTGTATCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KGLIKGNNVDEEEYSIHRVQAMR*RPFVSL Trigger: AAGAGATACAAAAGGCCTTCACCTCATTGCCTGCAC...CCTGTGGATAGAGTATTCCTCCTCATCCACATTATTTCCCTTTATAAGGCCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
||
| CDS-3UTR GCA 90 bp | GGAGAGGGGGTTATATTACTTGGCCTACATGTTAACTTTTGCTTCTTGGTCAGAATGGAAGACCTGCCTTaGAGATTCTCTTTTGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GEGVILLGLHVNFCFLVRMEDLP*RFSFGE Trigger: CTCTCCAAAAGAGAATCTGCAAGGCAGGTCTTCCAT...TCTGACCAAGAAGCAAAAGTTAACATGTAGGCCAAGTAATATAACCCCCTCTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000010085.4 ENSMUST00000113189.8 |
||
| CDS-3UTR GCA 90 bp | AAATCACAAACAACTTTGGAGGGAGACAGAAAAATTGCCAATGTGGGGAGAGGGCAAACATGGAAGACCTaGCTTGCAGATTCTCTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: KSQTTLEGDRKIANVGRGQTWKT*LADSLL Trigger: CAAAAGAGAATCTGCAAGGCAGGTCTTCCATGTTTG...CCCTCTCCCCACATTGGCAATTTTTCTGTCTCCCTCCAAAGTTGTTTGTGATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000010085.4 ENSMUST00000113189.8 |
||
| CDS-3UTR GCA 90 bp | TGGTCAGAAAGGCCTCTCTCTATTCCCAGGTGTGGGAAAGGCCTTATAAAGGGAATTGGTCATCATAACTaGATCTTTCTCTCCTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: WSERPLSIPRCGKGLIKGIGHHN*IFLSFF Trigger: AAAGAAGGAGAGAAAGATGCAGTTATGATGACCAAT...TCCCTTTATAAGGCCTTTCCCACACCTGGGAATAGAGAGAGGCCTTTCTGACCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
||
| CDS-3UTR GCA 90 bp | TTGGTCAGAAAGGCCTCTCTCTATTCCCAGGTGTGGGAAAGGCCTTATAAAGGGAGATCGCTATTTTTCTaGTTGTTTCATCACAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: LVRKASLYSQVWERPYKGRSLFF*LFHHKS Trigger: GGATTTGTGATGAAACAAGCAGAAAAATAGCGATCT...CCCTTTATAAGGCCTTTCCCACACCTGGGAATAGAGAGAGGCCTTTCTGACCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
||
| CDS-3UTR GCA 90 bp | ATTATGAAATCACAAACAACTTTGGAGGGAGACAGAAAAATTGCCAATGTGGGGGATCCAAGAAGCAGTTaGAGAAGGGGTTCCCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: IMKSQTTLEGDRKIANVGDPRSS*RRGSLP Trigger: TGGAAGGGAACCCCTTCTGCAACTGCTTCTTGGATC...CCCCACATTGGCAATTTTTCTGTCTCCCTCCAAAGTTGTTTGTGATTTCATAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
||
| CDS-3UTR GCA 90 bp | TTGGTCAGAAAGGCCTCTCTCTATTCCCAGGTGTGGGAAAGGCCTTATAAAGGGGTACTATTAAGTCCTTaGCATTCTGAAGATTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LVRKASLYSQVWERPYKGVLLSP*HSEDFL Trigger: CAAGAAATCTTCAGAATGGCAAGGACTTAATAGTAC...CCCTTTATAAGGCCTTTCCCACACCTGGGAATAGAGAGAGGCCTTTCTGACCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
||
| CDS-3UTR GCA 90 bp | AAATCACAAACAACTTTGGAGGGAGACAGAAAAATTGCCAATGTGGGGAGAGGGGACTTCACCATTTCCTaGTGTTCTTCAGAGAGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: KSQTTLEGDRKIANVGRGDFTIS*CSSESK Trigger: TTTGCTCTCTGAAGAACAGCAGGAAATGGTGAAGTC...CCCTCTCCCCACATTGGCAATTTTTCTGTCTCCCTCCAAAGTTGTTTGTGATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
||
| CDS-3UTR GCA 90 bp | AAATCACAAACAACTTTGGAGGGAGACAGAAAAATTGCCAATGTGGGGAGAGGGAGTTTCATTCCAGACTaGACAGAGAAAGACTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: KSQTTLEGDRKIANVGRGSFIPD*TEKDFT Trigger: GGTGAAGTCTTTCTCTGTGCAGTCTGGAATGAAACT...CCCTCTCCCCACATTGGCAATTTTTCTGTCTCCCTCCAAAGTTGTTTGTGATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
||
| CDS-3UTR CCA 90 bp | GGCCTTATAAAGGGAAATAATGTGGATGAGGAGGAATACTCTATCCACAGGACAGTATCTCTTTGGGACTaGCATTCCTCACAATCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GLIKGNNVDEEEYSIHRTVSLWD*HSSQSA Trigger: AGCTGATTGTGAGGAATGCCAGTCCCAAAGAGATAC...TGTCCTGTGGATAGAGTATTCCTCCTCATCCACATTATTTCCCTTTATAAGGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
||
| CDS-3UTR TCA 90 bp | GGGAAAGGCCTTATAAAGGGAAATAATGTGGATGAGGAGGAATACTCTATCCACGGATATCACTTTGAATaGTCTGTAGTGTGGCAACCA | + |
|
Preference number: 4 (lower is better) Translates to: GKGLIKGNNVDEEEYSIHGYHFE*SVVWQP Trigger: TGGTTGCCACACTACAGATCATTCAAAGTGATATCC...GTGGATAGAGTATTCCTCCTCATCCACATTATTTCCCTTTATAAGGCCTTTCCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
||
| CDS-3UTR TCA 90 bp | GGCCTTATAAAGGGAAATAATGTGGATGAGGAGGAATACTCTATCCACAGGACAGGATATCACTTTGAATaGTCTGTAGTGTGGCAACCA | + |
|
Preference number: 4 (lower is better) Translates to: GLIKGNNVDEEEYSIHRTGYHFE*SVVWQP Trigger: TGGTTGCCACACTACAGATCATTCAAAGTGATATCC...TGTCCTGTGGATAGAGTATTCCTCCTCATCCACATTATTTCCCTTTATAAGGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
||
| CDS-3UTR GCA 90 bp | GGAGAGGGGGTTATATTACTTGGCCTACATGTTAACTTTTGCTTCTTGGTCAGAATTCTGAAGGAAGAGTaGACTCTTGAATCGCTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: GEGVILLGLHVNFCFLVRILKEE*TLESLQ Trigger: TTGCAGCGATTCAAGAGTGCACTCTTCCTTCAGAAT...TCTGACCAAGAAGCAAAAGTTAACATGTAGGCCAAGTAATATAACCCCCTCTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000010085.4 |
||
| CDS-3UTR GCA 90 bp | GGAGAGGGGGTTATATTACTTGGCCTACATGTTAACTTTTGCTTCTTGGTCAGAGACTTCACCATTTCCTaGTGTTCTTCAGAGAGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: GEGVILLGLHVNFCFLVRDFTIS*CSSESK Trigger: TTTGCTCTCTGAAGAACAGCAGGAAATGGTGAAGTC...TCTGACCAAGAAGCAAAAGTTAACATGTAGGCCAAGTAATATAACCCCCTCTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
||
| CDS-3UTR GCA 90 bp | GGGAAAGGCCTTATAAAGGGAAATAATGTGGATGAGGAGGAATACTCTATCCACAGTTTCATTCCAGACTaGACAGAGAAAGACTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: GKGLIKGNNVDEEEYSIHSFIPD*TEKDFT Trigger: GGTGAAGTCTTTCTCTGTGCAGTCTGGAATGAAACT...GTGGATAGAGTATTCCTCCTCATCCACATTATTTCCCTTTATAAGGCCTTTCCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
||
| CDS-3UTR CCA 90 bp | GGGAAAGGCCTTATAAAGGGAAATAATGTGGATGAGGAGGAATACTCTATCCACTCTTCTGAACAAACATaGAAGACCTGCCTTGCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: GKGLIKGNNVDEEEYSIHSSEQT*KTCLAD Trigger: ATCTGCAAGGCAGGTCTTCCATGTTTGTTCAGAAGA...GTGGATAGAGTATTCCTCCTCATCCACATTATTTCCCTTTATAAGGCCTTTCCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010085.4 ENSMUST00000113189.8 |
||
| CDS-3UTR CCA 90 bp | TTCTTGGTCAGAAAGGCCTCTCTCTATTCCCAGGTGTGGGAAAGGCCTTATAAACTGAAGATTTCTTTTTaGTACTATTATGTCCTCGCC | + |
|
Preference number: 4 (lower is better) Translates to: FLVRKASLYSQVWERPYKLKISF*YYYVLA Trigger: GGCGAGGACATAATAGTACCAAAAAGAAATCTTCAG...TTTATAAGGCCTTTCCCACACCTGGGAATAGAGAGAGGCCTTTCTGACCAAGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
||
| CDS-3UTR CCA 90 bp | GGGTTATATTACTTGGCCTACATGTTAACTTTTGCTTCTTGGTCAGAAAGGCCTCAAGTTGTTCAGGTTTaGGTCACTGACATCGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: GLYYLAYMLTFASWSERPQVVQV*VTDIER Trigger: CCTTTCGATGTCAGTGACCCAAACCTGAACAACTTG...AGGCCTTTCTGACCAAGAAGCAAAAGTTAACATGTAGGCCAAGTAATATAACCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
||
| CDS-3UTR TCA 90 bp | GAAAGGCCTCTCTCTATTCCCAGGTGTGGGAAAGGCCTTATAAAGGGAAATAATGAATTAATGTTCTTCTaGACAAACATGGAAGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: ERPLSIPRCGKGLIKGNNELMFF*TNMEDL Trigger: CAGGTCTTCCATGTTTGTTCAGAAGAACATTAATTC...ATTATTTCCCTTTATAAGGCCTTTCCCACACCTGGGAATAGAGAGAGGCCTTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010085.4 ENSMUST00000113189.8 |
||
| CDS-3UTR TCA 90 bp | GGGAAAGGCCTTATAAAGGGAAATAATGTGGATGAGGAGGAATACTCTATCCACCCTTCTCCAATTCCGTaGATGACTTCAGTTTATTTC | + |
|
Preference number: 4 (lower is better) Translates to: GKGLIKGNNVDEEEYSIHPSPIP*MTSVYF Trigger: GAAATAAACTGAAGTCATTCACGGAATTGGAGAAGG...GTGGATAGAGTATTCCTCCTCATCCACATTATTTCCCTTTATAAGGCCTTTCCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
||
| CDS-3UTR TCA 90 bp | AAAGGCCTTATAAAGGGAAATAATGTGGATGAGGAGGAATACTCTATCCACAGGGAGCAAAGATCATGCTaGGTTTTGGGTAACAAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: KGLIKGNNVDEEEYSIHREQRSC*VLGNKL Trigger: TAGCTTGTTACCCAAAACTCAGCATGATCTTTGCTC...CCTGTGGATAGAGTATTCCTCCTCATCCACATTATTTCCCTTTATAAGGCCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
||
| CDS-3UTR GCA 90 bp | AAAGGCCTTATAAAGGGAAATAATGTGGATGAGGAGGAATACTCTATCCACAGGCAAACATGGAAGACCTaGCTTGCAGATTCTCTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: KGLIKGNNVDEEEYSIHRQTWKT*LADSLL Trigger: CAAAAGAGAATCTGCAAGGCAGGTCTTCCATGTTTG...CCTGTGGATAGAGTATTCCTCCTCATCCACATTATTTCCCTTTATAAGGCCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010085.4 ENSMUST00000113189.8 |
||
| CDS-3UTR GCA 90 bp | TATGAAATCACAAACAACTTTGGAGGGAGACAGAAAAATTGCCAATGTGGGGAGGTACTATTAAGTCCTTaGCATCCTGAGGATTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: YEITNNFGGRQKNCQCGEVLLSP*HPEDFL Trigger: CAGGAAATCCTCAGGATGGCAAGGACTTAATAGTAC...CTCCCCACATTGGCAATTTTTCTGTCTCCCTCCAAAGTTGTTTGTGATTTCATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
||
| CDS-3UTR GCA 90 bp | GGGTTATATTACTTGGCCTACATGTTAACTTTTGCTTCTTGGTCAGAAAGGCCTAGTTTCATTCCAGACTaGACAGAGAAAGACTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: GLYYLAYMLTFASWSERPSFIPD*TEKDFT Trigger: GGTGAAGTCTTTCTCTGTGCAGTCTGGAATGAAACT...AGGCCTTTCTGACCAAGAAGCAAAAGTTAACATGTAGGCCAAGTAATATAACCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
||
| CDS-3UTR CCA 90 bp | GAAAGGCCTCTCTCTATTCCCAGGTGTGGGAAAGGCCTTATAAAGGGAAATAATTTCTTTTCATTCCCATaGCATATGGAGCACCATAAT | + |
|
Preference number: 4 (lower is better) Translates to: ERPLSIPRCGKGLIKGNNFFSFP*HMEHHN Trigger: ATTATGGTGCTCCATATGCCATGGGAATGAAAAGAA...ATTATTTCCCTTTATAAGGCCTTTCCCACACCTGGGAATAGAGAGAGGCCTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
||
| CDS-3UTR CCA 90 bp | GAAAGGCCTCTCTCTATTCCCAGGTGTGGGAAAGGCCTTATAAAGGGAAATAATCTGAAGATTTCTTTTTaGTACTATTATGTCCTCGCC | + |
|
Preference number: 4 (lower is better) Translates to: ERPLSIPRCGKGLIKGNNLKISF*YYYVLA Trigger: GGCGAGGACATAATAGTACCAAAAAGAAATCTTCAG...ATTATTTCCCTTTATAAGGCCTTTCCCACACCTGGGAATAGAGAGAGGCCTTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
||
| CDS-3UTR CCA 90 bp | TTATATTACTTGGCCTACATGTTAACTTTTGCTTCTTGGTCAGAAAGGCCTCTCGTATCTCTTTGGGACTaGCATTCCTCACAATCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LYYLAYMLTFASWSERPLVSLWD*HSSQSA Trigger: AGCTGATTGTGAGGAATGCCAGTCCCAAAGAGATAC...GAGAGGCCTTTCTGACCAAGAAGCAAAAGTTAACATGTAGGCCAAGTAATATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
||
| CDS-3UTR CCA 90 bp | GGCCTTATAAAGGGAAATAATGTGGATGAGGAGGAATACTCTATCCACAGGACATTTGAAGAATTCCTTTaGGATCTTGCCCTCATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GLIKGNNVDEEEYSIHRTFEEFL*DLALIL Trigger: CAGAATGAGGGCAAGATCCCAAAGGAATTCTTCAAA...TGTCCTGTGGATAGAGTATTCCTCCTCATCCACATTATTTCCCTTTATAAGGCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
||
| CDS-3UTR TCA 90 bp | GGAGAGGGGGTTATATTACTTGGCCTACATGTTAACTTTTGCTTCTTGGTCAGAGAATTAATGTTCTTCTaGACAAACATGGAAGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: GEGVILLGLHVNFCFLVRELMFF*TNMEDL Trigger: CAGGTCTTCCATGTTTGTTCAGAAGAACATTAATTC...TCTGACCAAGAAGCAAAAGTTAACATGTAGGCCAAGTAATATAACCCCCTCTCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000010085.4 ENSMUST00000113189.8 |
||
| CDS-3UTR TCA 90 bp | GGAGAGGGGGTTATATTACTTGGCCTACATGTTAACTTTTGCTTCTTGGTCAGAGTACTCCATTTGTTCTaGTGTAAACTTGTTTTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: GEGVILLGLHVNFCFLVRVLHLF*CKLVLH Trigger: GTGCAAAACAAGTTTACATCAGAACAAATGGAGTAC...TCTGACCAAGAAGCAAAAGTTAACATGTAGGCCAAGTAATATAACCCCCTCTCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
||
| CDS-3UTR TCA 90 bp | GGCCTTATAAAGGGAAATAATGTGGATGAGGAGGAATACTCTATCCACAGGACAGATCTCTGCTGTATTTaGAATACTCTTCCAAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: GLIKGNNVDEEEYSIHRTDLCCI*NTLPSC Trigger: ACAACTTGGAAGAGTATTTCAAATACAGCAGAGATC...TGTCCTGTGGATAGAGTATTCCTCCTCATCCACATTATTTCCCTTTATAAGGCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
||
| CDS-3UTR TCA 90 bp | GGAGAGGGGGTTATATTACTTGGCCTACATGTTAACTTTTGCTTCTTGGTCAGAGATCTCTGCTGTATTTaGAATACTCTTCCAAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: GEGVILLGLHVNFCFLVRDLCCI*NTLPSC Trigger: ACAACTTGGAAGAGTATTTCAAATACAGCAGAGATC...TCTGACCAAGAAGCAAAAGTTAACATGTAGGCCAAGTAATATAACCCCCTCTCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
||
| CDS-3UTR GCA 90 bp | GGGAAAGGCCTTATAAAGGGAAATAATGTGGATGAGGAGGAATACTCTATCCACGTACTATTAGGCCCTTaGCATTCTGAAGATTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: GKGLIKGNNVDEEEYSIHVLLGP*HSEDFF Trigger: AAAGAAATCTTCAGAATGGCAAGGGCCTAATAGTAC...GTGGATAGAGTATTCCTCCTCATCCACATTATTTCCCTTTATAAGGCCTTTCCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
||
| CDS-3UTR GCA 90 bp | GGCCTTATAAAGGGAAATAATGTGGATGAGGAGGAATACTCTATCCACAGGACAGTACTATTAGGCCCTTaGCATTCTGAAGATTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: GLIKGNNVDEEEYSIHRTVLLGP*HSEDFF Trigger: AAAGAAATCTTCAGAATGGCAAGGGCCTAATAGTAC...TGTCCTGTGGATAGAGTATTCCTCCTCATCCACATTATTTCCCTTTATAAGGCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
||
| CDS-3UTR GCA 90 bp | AAATCACAAACAACTTTGGAGGGAGACAGAAAAATTGCCAATGTGGGGAGAGGGGTACTATTAAGTCCTTaGCATTCTGAAGATTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: KSQTTLEGDRKIANVGRGVLLSP*HSEDFL Trigger: CAAGAAATCTTCAGAATGGCAAGGACTTAATAGTAC...CCCTCTCCCCACATTGGCAATTTTTCTGTCTCCCTCCAAAGTTGTTTGTGATTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
||
| CDS-3UTR CCA 90 bp | GGAGAGGGGGTTATATTACTTGGCCTACATGTTAACTTTTGCTTCTTGGTCAGATTCTTTTCATTCCCATaGCATATGGAGCACCATAAT | + |
|
Preference number: 4 (lower is better) Translates to: GEGVILLGLHVNFCFLVRFFSFP*HMEHHN Trigger: ATTATGGTGCTCCATATGCCATGGGAATGAAAAGAA...TCTGACCAAGAAGCAAAAGTTAACATGTAGGCCAAGTAATATAACCCCCTCTCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
||
| CDS-3UTR CCA 90 bp | GGGAAAGGCCTTATAAAGGGAAATAATGTGGATGAGGAGGAATACTCTATCCACCTGAAGATTTCTTTTTaGTACTATTATGTCCTCGCC | + |
|
Preference number: 4 (lower is better) Translates to: GKGLIKGNNVDEEEYSIHLKISF*YYYVLA Trigger: GGCGAGGACATAATAGTACCAAAAAGAAATCTTCAG...GTGGATAGAGTATTCCTCCTCATCCACATTATTTCCCTTTATAAGGCCTTTCCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
||
| CDS-3UTR TCA 90 bp | GGGTTATATTACTTGGCCTACATGTTAACTTTTGCTTCTTGGTCAGAAAGGCCTGTACTCCATTTGTTCTaGTGTAAACTTGTTTTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: GLYYLAYMLTFASWSERPVLHLF*CKLVLH Trigger: GTGCAAAACAAGTTTACATCAGAACAAATGGAGTAC...AGGCCTTTCTGACCAAGAAGCAAAAGTTAACATGTAGGCCAAGTAATATAACCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
||
| CDS-3UTR TCA 90 bp | GGGTTATATTACTTGGCCTACATGTTAACTTTTGCTTCTTGGTCAGAAAGGCCTCTTATATACTCAAAATaGTCCAAGAAGCAGTTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GLYYLAYMLTFASWSERPLIYSK*SKKQLQ Trigger: CTGCAACTGCTTCTTGGATCATTTTGAGTATATAAG...AGGCCTTTCTGACCAAGAAGCAAAAGTTAACATGTAGGCCAAGTAATATAACCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
||
| CDS-3UTR TCA 90 bp | TATGAAATCACAAACAACTTTGGAGGGAGACAGAAAAATTGCCAATGTGGGGAGCTTATATACTCAAAATaGTCCAAGAAGCAGTTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: YEITNNFGGRQKNCQCGELIYSK*SKKQLQ Trigger: CTGCAACTGCTTCTTGGATCATTTTGAGTATATAAG...CTCCCCACATTGGCAATTTTTCTGTCTCCCTCCAAAGTTGTTTGTGATTTCATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
||
| CDS-3UTR TCA 90 bp | GGGTTATATTACTTGGCCTACATGTTAACTTTTGCTTCTTGGTCAGAAAGGCCTGATCTCTGCTGTATTTaGAATACTCTTCCAAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: GLYYLAYMLTFASWSERPDLCCI*NTLPSC Trigger: ACAACTTGGAAGAGTATTTCAAATACAGCAGAGATC...AGGCCTTTCTGACCAAGAAGCAAAAGTTAACATGTAGGCCAAGTAATATAACCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
||
| CDS-3UTR GCA 90 bp | GGAGAGGGGGTTATATTACTTGGCCTACATGTTAACTTTTGCTTCTTGGTCAGAATTGGTCATCATAACTaGATCTTTCTCTCCTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: GEGVILLGLHVNFCFLVRIGHHN*IFLSFF Trigger: AAAGAAGGAGAGAAAGATGCAGTTATGATGACCAAT...TCTGACCAAGAAGCAAAAGTTAACATGTAGGCCAAGTAATATAACCCCCTCTCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
||
| CDS-3UTR GCA 90 bp | GGAGAGGGGGTTATATTACTTGGCCTACATGTTAACTTTTGCTTCTTGGTCAGAGTACTATTAAGTCCTTaGCATTCTGAAGATTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GEGVILLGLHVNFCFLVRVLLSP*HSEDFL Trigger: CAAGAAATCTTCAGAATGGCAAGGACTTAATAGTAC...TCTGACCAAGAAGCAAAAGTTAACATGTAGGCCAAGTAATATAACCCCCTCTCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
||
| CDS-3UTR GCA 90 bp | TATGAAATCACAAACAACTTTGGAGGGAGACAGAAAAATTGCCAATGTGGGGAGAGATCGCTATTTTTCTaGTTGTTTCATCACAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: YEITNNFGGRQKNCQCGERSLFF*LFHHKS Trigger: GGATTTGTGATGAAACAAGCAGAAAAATAGCGATCT...CTCCCCACATTGGCAATTTTTCTGTCTCCCTCCAAAGTTGTTTGTGATTTCATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
||
| CDS-3UTR CCA 90 bp | TTATATTACTTGGCCTACATGTTAACTTTTGCTTCTTGGTCAGAAAGGCCTCTCTTCTTTTCATTCCCATaGCATATGGAGCACCATAAT | + |
|
Preference number: 4 (lower is better) Translates to: LYYLAYMLTFASWSERPLFFSFP*HMEHHN Trigger: ATTATGGTGCTCCATATGCCATGGGAATGAAAAGAA...GAGAGGCCTTTCTGACCAAGAAGCAAAAGTTAACATGTAGGCCAAGTAATATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
||
| CDS-3UTR CAA 90 bp | GCTTCTTGGTCAGAAAGGCCTCTCTCTATTCCCAGGTGTGGGAAAGGCCTTATAACTGCATTCGCATGCTaGAGTCTTGCTGCCTCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: ASWSERPLSIPRCGKGLITAFAC*SLAASL Trigger: TAAAGAGGCAGCAAGACTCAAGCATGCGAATGCAGT...TATAAGGCCTTTCCCACACCTGGGAATAGAGAGAGGCCTTTCTGACCAAGAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
||
| CDS-3UTR CAA 90 bp | GCTTCTTGGTCAGAAAGGCCTCTCTCTATTCCCAGGTGTGGGAAAGGCCTTATACCTCGATGTCCATTTTaGTTGGTACTATTAGGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: ASWSERPLSIPRCGKGLIPRCPF*LVLLGP Trigger: AGGACCTAATAGTACCAACAAAAATGGACATCGAGG...TATAAGGCCTTTCCCACACCTGGGAATAGAGAGAGGCCTTTCTGACCAAGAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
||
| CDS-3UTR CAA 90 bp | TCAGAAAGGCCTCTCTCTATTCCCAGGTGTGGGAAAGGCCTTATAAAGGGAAATAATTCCTTTGGGATCTaGCCCTCATTCTGGAGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: SERPLSIPRCGKGLIKGNNSFGI*PSFWRA Trigger: TGCTCTCCAGAATGAGGGCAAGATCCCAAAGGAATT...ATTTCCCTTTATAAGGCCTTTCCCACACCTGGGAATAGAGAGAGGCCTTTCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
||
| CDS GCA 90 bp | CTCACAATCAGCTCATCGTTCATGATGCAAATTCTGAAGGAAGAGTaGACTCTTGAATCGCTGCAAGGGATAGCAATGAAGATCCTCGTG | + |
|
Preference number: 5 (lower is better) Translates to: LTISSSFMMQILKEE*TLESLQGIAMKILV Trigger: CACGAGGATCTTCATTGCTATCCCTTGCAGCGATTCAAGAGTGCACTCTTCCTTCAGAATTTGCATCATGAACGATGAGCTGATTGTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010085.4 |
||
| CDS-3UTR CAA 90 bp | AAATCACAAACAACTTTGGAGGGAGACAGAAAAATTGCCAATGTGGGGAGAGGGACTGCATTCGCATGCTaGAGTCTTGCTGCCTCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: KSQTTLEGDRKIANVGRGTAFAC*SLAASL Trigger: TAAAGAGGCAGCAAGACTCAAGCATGCGAATGCAGT...CCCTCTCCCCACATTGGCAATTTTTCTGTCTCCCTCCAAAGTTGTTTGTGATTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
||
| CDS-3UTR CAA 90 bp | GAAAGGCCTCTCTCTATTCCCAGGTGTGGGAAAGGCCTTATAAAGGGAAATAATAATTCCTTTGGGATCTaGCCCTCATTCTGGAGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: ERPLSIPRCGKGLIKGNNNSFGI*PSFWRA Trigger: TGCTCTCCAGAATGAGGGCAAGATCCCAAAGGAATT...ATTATTTCCCTTTATAAGGCCTTTCCCACACCTGGGAATAGAGAGAGGCCTTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
||
| CDS-3UTR CAA 90 bp | AAATCACAAACAACTTTGGAGGGAGACAGAAAAATTGCCAATGTGGGGAGAGGGCTGGGAATTGTGACCTaGTACCATTTCTCCTCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: KSQTTLEGDRKIANVGRGLGIVT*YHFSSV Trigger: AACTGAGGAGAAATGGTACAAGGTCACAATTCCCAG...CCCTCTCCCCACATTGGCAATTTTTCTGTCTCCCTCCAAAGTTGTTTGTGATTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
||
| CDS-3UTR CAA 90 bp | TGGTCAGAAAGGCCTCTCTCTATTCCCAGGTGTGGGAAAGGCCTTATAAAGGGATCGCTATTTTTCTGCTaGTTTCATCACAAATCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: WSERPLSIPRCGKGLIKGSLFFC*FHHKSC Trigger: ACAGGATTTGTGATGAAACAAGCAGAAAAATAGCGA...TCCCTTTATAAGGCCTTTCCCACACCTGGGAATAGAGAGAGGCCTTTCTGACCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
||
| CDS-3UTR CAA 90 bp | TTGGTCAGAAAGGCCTCTCTCTATTCCCAGGTGTGGGAAAGGCCTTATAAAGGGTCGCTATTTTTCTGCTaGTTTCATCACAAATCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: LVRKASLYSQVWERPYKGSLFFC*FHHKSC Trigger: ACAGGATTTGTGATGAAACAAGCAGAAAAATAGCGA...CCCTTTATAAGGCCTTTCCCACACCTGGGAATAGAGAGAGGCCTTTCTGACCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
||
| CDS-3UTR CAA 90 bp | TCAGAAAGGCCTCTCTCTATTCCCAGGTGTGGGAAAGGCCTTATAAAGGGAAATAAATACTCTTCCAAGTaGTTCAGGTTTGGGTCACTG | + |
|
Preference number: 5 (lower is better) Translates to: SERPLSIPRCGKGLIKGNKYSSK*FRFGSL Trigger: CAGTGACCCAAACCTGAACAACTTGGAAGAGTATTT...ATTTCCCTTTATAAGGCCTTTCCCACACCTGGGAATAGAGAGAGGCCTTTCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
||
| CDS-3UTR CAA 90 bp | GGCCTTATAAAGGGAAATAATGTGGATGAGGAGGAATACTCTATCCACAGGACACTGGGAATTGTGACCTaGTACCATTTCTCCTCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: GLIKGNNVDEEEYSIHRTLGIVT*YHFSSV Trigger: AACTGAGGAGAAATGGTACAAGGTCACAATTCCCAG...TGTCCTGTGGATAGAGTATTCCTCCTCATCCACATTATTTCCCTTTATAAGGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
||
| CDS-3UTR CAA 90 bp | TTCTTGGTCAGAAAGGCCTCTCTCTATTCCCAGGTGTGGGAAAGGCCTTATAAAATCATGTCAATATCCTaGTCCATTAAGTCCTGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: FLVRKASLYSQVWERPYKIMSIS*SIKSWS Trigger: TGACCAGGACTTAATGGACAAGGATATTGACATGAT...TTTATAAGGCCTTTCCCACACCTGGGAATAGAGAGAGGCCTTTCTGACCAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
||
| CDS-3UTR CAA 90 bp | AAATCACAAACAACTTTGGAGGGAGACAGAAAAATTGCCAATGTGGGGAGAGGGCATTCTGAAGATTTCTaGTCGGTACTATTAGGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: KSQTTLEGDRKIANVGRGHSEDF*SVLLGP Trigger: AGGGCCTAATAGTACCGACAAGAAATCTTCAGAATG...CCCTCTCCCCACATTGGCAATTTTTCTGTCTCCCTCCAAAGTTGTTTGTGATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
||
| CDS-3UTR CAA 90 bp | GAAAGGCCTCTCTCTATTCCCAGGTGTGGGAAAGGCCTTATAAAGGGAAATAATAAATACTCTTCCAAGTaGTTCAGGTTTGGGTCACTG | + |
|
Preference number: 5 (lower is better) Translates to: ERPLSIPRCGKGLIKGNNKYSSK*FRFGSL Trigger: CAGTGACCCAAACCTGAACAACTTGGAAGAGTATTT...ATTATTTCCCTTTATAAGGCCTTTCCCACACCTGGGAATAGAGAGAGGCCTTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
||
| CDS-3UTR CAA 90 bp | GGGTTATATTACTTGGCCTACATGTTAACTTTTGCTTCTTGGTCAGAAAGGCCTACTGCATTCGCATGCTaGAGTCTTGCTGCCTCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: GLYYLAYMLTFASWSERPTAFAC*SLAASL Trigger: TAAAGAGGCAGCAAGACTCAAGCATGCGAATGCAGT...AGGCCTTTCTGACCAAGAAGCAAAAGTTAACATGTAGGCCAAGTAATATAACCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
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| CDS GCA 90 bp | TGTTTTGTGTGCTTCAGCAACTGCATTCGCATGCTTGAGTCTTGCTaGCTCTTTAGATCTCTGCTGTATTTGAAATACTCTTCCAAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: CFVCFSNCIRMLESC*LFRSLLYLKYSSKL Trigger: CAACTTGGAAGAGTATTTCAAATACAGCAGAGATCTAAAGAGGCAGCAAGACTCAAGCATGCGAATGCAGTTGCTGAAGCACACAAAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
||
| CDS-3UTR CAA 90 bp | TTCTTGGTCAGAAAGGCCTCTCTCTATTCCCAGGTGTGGGAAAGGCCTTATAAAAATCTCTCAGATCTCTaGTATGGTAAACCATATCGT | + |
|
Preference number: 5 (lower is better) Translates to: FLVRKASLYSQVWERPYKNLSDL*YGKPYR Trigger: ACGATATGGTTTACCATACAAGAGATCTGAGAGATT...TTTATAAGGCCTTTCCCACACCTGGGAATAGAGAGAGGCCTTTCTGACCAAGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
||
| CDS-3UTR CAA 90 bp | GGAGAGGGGGTTATATTACTTGGCCTACATGTTAACTTTTGCTTCTTGGTCAGATACAGAAGTTCTGGATaGACCTCATTAGCCATGTCT | + |
|
Preference number: 5 (lower is better) Translates to: GEGVILLGLHVNFCFLVRYRSSG*TSLAMS Trigger: AGACATGGCTAATGAGGTCAATCCAGAACTTCTGTA...TCTGACCAAGAAGCAAAAGTTAACATGTAGGCCAAGTAATATAACCCCCTCTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
||
| CDS-3UTR CAA 90 bp | GGAGAGGGGGTTATATTACTTGGCCTACATGTTAACTTTTGCTTCTTGGTCAGACCTCGATGTCCATTTTaGTTGGTACTATTAGGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: GEGVILLGLHVNFCFLVRPRCPF*LVLLGP Trigger: AGGACCTAATAGTACCAACAAAAATGGACATCGAGG...TCTGACCAAGAAGCAAAAGTTAACATGTAGGCCAAGTAATATAACCCCCTCTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
||
| CDS-3UTR CAA 90 bp | TTCTTGGTCAGAAAGGCCTCTCTCTATTCCCAGGTGTGGGAAAGGCCTTATAAAAGATCTCTGCTGTATTaGAAATACTCTTCCAAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: FLVRKASLYSQVWERPYKRSLLY*KYSSKL Trigger: CAACTTGGAAGAGTATTTCAAATACAGCAGAGATCT...TTTATAAGGCCTTTCCCACACCTGGGAATAGAGAGAGGCCTTTCTGACCAAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
||
| CDS-3UTR CAA 90 bp | AAAGGCCTTATAAAGGGAAATAATGTGGATGAGGAGGAATACTCTATCCACAGGTACAGAAGTTCTGGATaGACCTCATTAGCCATGTCT | + |
|
Preference number: 5 (lower is better) Translates to: KGLIKGNNVDEEEYSIHRYRSSG*TSLAMS Trigger: AGACATGGCTAATGAGGTCAATCCAGAACTTCTGTA...CCTGTGGATAGAGTATTCCTCCTCATCCACATTATTTCCCTTTATAAGGCCTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
||
| CDS-3UTR CAA 90 bp | GGAGAGGGGGTTATATTACTTGGCCTACATGTTAACTTTTGCTTCTTGGTCAGAATCATGTCAATATCCTaGTCCATTAAGTCCTGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: GEGVILLGLHVNFCFLVRIMSIS*SIKSWS Trigger: TGACCAGGACTTAATGGACAAGGATATTGACATGAT...TCTGACCAAGAAGCAAAAGTTAACATGTAGGCCAAGTAATATAACCCCCTCTCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
||
| CDS-3UTR CAA 90 bp | AAATCACAAACAACTTTGGAGGGAGACAGAAAAATTGCCAATGTGGGGAGAGGGTCTGAAGATTTCTTTTaGGTACTATTATGTCCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: KSQTTLEGDRKIANVGRGSEDFF*VLLCPR Trigger: GCGAGGACATAATAGTACCAAAAAGAAATCTTCAGA...CCCTCTCCCCACATTGGCAATTTTTCTGTCTCCCTCCAAAGTTGTTTGTGATTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
||
| CDS-3UTR CAA 90 bp | GGGTTATATTACTTGGCCTACATGTTAACTTTTGCTTCTTGGTCAGAAAGGCCTCCTCGATGTCCATTTTaGTTGGTACTATTAGGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: GLYYLAYMLTFASWSERPPRCPF*LVLLGP Trigger: AGGACCTAATAGTACCAACAAAAATGGACATCGAGG...AGGCCTTTCTGACCAAGAAGCAAAAGTTAACATGTAGGCCAAGTAATATAACCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
||
| CDS-3UTR CAA 90 bp | AAATCACAAACAACTTTGGAGGGAGACAGAAAAATTGCCAATGTGGGGAGAGGGAGATCTCTGCTGTATTaGAAATACTCTTCCAAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: KSQTTLEGDRKIANVGRGRSLLY*KYSSKL Trigger: CAACTTGGAAGAGTATTTCAAATACAGCAGAGATCT...CCCTCTCCCCACATTGGCAATTTTTCTGTCTCCCTCCAAAGTTGTTTGTGATTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
||
| CDS TCA 90 bp | GTCATACCGGTTCATCATAGATTCCCTTATGTACTCCATTTGTTCTaGTGTAAACTTGTTTTGCACAGAATAGGGCACAACAGAAGGACT | + |
|
Preference number: 5 (lower is better) Translates to: VIPVHHRFPYVLHLF*CKLVLHRIGHNRRT Trigger: AGTCCTTCTGTTGTGCCCTATTCTGTGCAAAACAAGTTTACATCAGAACAAATGGAGTACATAAGGGAATCTATGATGAACCGGTATGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
||
| CDS-3UTR CAA 90 bp | GGAGAGGGGGTTATATTACTTGGCCTACATGTTAACTTTTGCTTCTTGGTCAGAAATCTCTCAGATCTCTaGTATGGTAAACCATATCGT | + |
|
Preference number: 5 (lower is better) Translates to: GEGVILLGLHVNFCFLVRNLSDL*YGKPYR Trigger: ACGATATGGTTTACCATACAAGAGATCTGAGAGATT...TCTGACCAAGAAGCAAAAGTTAACATGTAGGCCAAGTAATATAACCCCCTCTCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
||
| CDS-3UTR CAA 90 bp | ATTATGAAATCACAAACAACTTTGGAGGGAGACAGAAAAATTGCCAATGTGGGGTACAGAAGTTCTGGATaGACCTCATTAGCCATGTCT | + |
|
Preference number: 5 (lower is better) Translates to: IMKSQTTLEGDRKIANVGYRSSG*TSLAMS Trigger: AGACATGGCTAATGAGGTCAATCCAGAACTTCTGTA...CCCCACATTGGCAATTTTTCTGTCTCCCTCCAAAGTTGTTTGTGATTTCATAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
||
| CDS-3UTR CAA 90 bp | ATTATGAAATCACAAACAACTTTGGAGGGAGACAGAAAAATTGCCAATGTGGGGCATTCTGAAGATTTCTaGTCGGTACTATTAGGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: IMKSQTTLEGDRKIANVGHSEDF*SVLLGP Trigger: AGGGCCTAATAGTACCGACAAGAAATCTTCAGAATG...CCCCACATTGGCAATTTTTCTGTCTCCCTCCAAAGTTGTTTGTGATTTCATAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
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| CDS-3UTR CAA 90 bp | ATTATGAAATCACAAACAACTTTGGAGGGAGACAGAAAAATTGCCAATGTGGGGAAATACTCTTCCAAGTaGTTCAGGTTTGGGTCACTG | + |
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Preference number: 5 (lower is better) Translates to: IMKSQTTLEGDRKIANVGKYSSK*FRFGSL Trigger: CAGTGACCCAAACCTGAACAACTTGGAAGAGTATTT...CCCCACATTGGCAATTTTTCTGTCTCCCTCCAAAGTTGTTTGTGATTTCATAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
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| CDS-3UTR CAA 90 bp | GGGAAAGGCCTTATAAAGGGAAATAATGTGGATGAGGAGGAATACTCTATCCACAGATCTCTGCTGTATTaGAAATACTCTTCCAAGTTG | + |
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Preference number: 5 (lower is better) Translates to: GKGLIKGNNVDEEEYSIHRSLLY*KYSSKL Trigger: CAACTTGGAAGAGTATTTCAAATACAGCAGAGATCT...GTGGATAGAGTATTCCTCCTCATCCACATTATTTCCCTTTATAAGGCCTTTCCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
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| CDS-3UTR CAA 90 bp | AAAGGCCTTATAAAGGGAAATAATGTGGATGAGGAGGAATACTCTATCCACAGGAATCTCTCAGATCTCTaGTATGGTAAACCATATCGT | + |
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Preference number: 5 (lower is better) Translates to: KGLIKGNNVDEEEYSIHRNLSDL*YGKPYR Trigger: ACGATATGGTTTACCATACAAGAGATCTGAGAGATT...CCTGTGGATAGAGTATTCCTCCTCATCCACATTATTTCCCTTTATAAGGCCTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
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| CDS-3UTR CAA 90 bp | TATGAAATCACAAACAACTTTGGAGGGAGACAGAAAAATTGCCAATGTGGGGAGTCGCTATTTTTCTGCTaGTTTCATCACAAATCCTGT | + |
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Preference number: 5 (lower is better) Translates to: YEITNNFGGRQKNCQCGESLFFC*FHHKSC Trigger: ACAGGATTTGTGATGAAACAAGCAGAAAAATAGCGA...CTCCCCACATTGGCAATTTTTCTGTCTCCCTCCAAAGTTGTTTGTGATTTCATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
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| CDS-3UTR CAA 90 bp | ATTATGAAATCACAAACAACTTTGGAGGGAGACAGAAAAATTGCCAATGTGGGGATCATGTCAATATCCTaGTCCATTAAGTCCTGGTCA | + |
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Preference number: 5 (lower is better) Translates to: IMKSQTTLEGDRKIANVGIMSIS*SIKSWS Trigger: TGACCAGGACTTAATGGACAAGGATATTGACATGAT...CCCCACATTGGCAATTTTTCTGTCTCCCTCCAAAGTTGTTTGTGATTTCATAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
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| CDS-3UTR CAA 90 bp | AAAGGCCTTATAAAGGGAAATAATGTGGATGAGGAGGAATACTCTATCCACAGGTCTGAAGATTTCTTTTaGGTACTATTATGTCCTCGC | + |
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Preference number: 5 (lower is better) Translates to: KGLIKGNNVDEEEYSIHRSEDFF*VLLCPR Trigger: GCGAGGACATAATAGTACCAAAAAGAAATCTTCAGA...CCTGTGGATAGAGTATTCCTCCTCATCCACATTATTTCCCTTTATAAGGCCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
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| CDS TCA 72 bp | ATTCCTTTGGGATCTTGCCCTCATTCTGGAGAGCAGTaGAGGCCTCACCAGCTTTGGTGTAGTCCCACTCGT | + |
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Preference number: 6 (lower is better) Translates to: IPLGSCPHSGEQ*RPHQLWCSPTR Trigger: ACGAGTGGGACTACACCAAAGCTGGTGAGGCCTTCACTGCTCTCCAGAATGAGGGCAAGATCCCAAAGGAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
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| CDS CAA 72 bp | TTCACCATTTCCTGCTGTTCTTCAGAGAGCAAAGGCTaGAATGACGTGTCGGGTGCAGGCAATGAGGTGAAG | + |
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Preference number: 6 (lower is better) Translates to: FTISCCSSESKG*NDVSGAGNEVK Trigger: CTTCACCTCATTGCCTGCACCCGACACGTCATTCAAGCCTTTGCTCTCTGAAGAACAGCAGGAAATGGTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
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| CDS TCA 72 bp | GGGCCTGGGTTTTGTCATAGTGGAAATCAACAGGGATaGAGGGCTCACTACAGAAGTTCTGGATTGACCTCA | + |
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Preference number: 6 (lower is better) Translates to: GPGFCHSGNQQG*RAHYRSSGLTS Trigger: TGAGGTCAATCCAGAACTTCTGTAGTGAGCCCTTCATCCCTGTTGATTTCCACTATGACAAAACCCAGGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
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| CDS CAA 72 bp | TTTCCTTGCATGGTTGCGGGACCTCGATGTCCATTTTaGTTGGTACTATTAGGTCCTTGCCATCCTGAGGAT | + |
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Preference number: 6 (lower is better) Translates to: FPCMVAGPRCPF*LVLLGPCHPED Trigger: ATCCTCAGGATGGCAAGGACCTAATAGTACCAACAAAAATGGACATCGAGGTCCCGCAACCATGCAAGGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
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| CDS CAA 90 bp | TTCTTGTCGGTACTATTAGGCCCTTGCCATTCTGAAGATTTCTTTTaGGTACTATTATGTCCTCGCCATCCAGACGCAACAGCTTGGGGA | + |
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Preference number: 6 (lower is better) Translates to: FLSVLLGPCHSEDFF*VLLCPRHPDATAWG Trigger: TCCCCAAGCTGTTGCGTCTGGATGGCGAGGACATAATAGTACCAAAAAGAAATCTTCAGAATGGCAAGGGCCTAATAGTACCGACAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
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| CDS TCA 72 bp | GGATTTCCTGTCGGTACTATTAAGTCCTTGCCATCCTaGGGATTTCCTGTCGGTACTATTAAGTCCTTGCCA | + |
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Preference number: 6 (lower is better) Translates to: GFPVGTIKSLPS*GFPVGTIKSLP Trigger: TGGCAAGGACTTAATAGTACCGACAGGAAATCCTCAGGATGGCAAGGACTTAATAGTACCGACAGGAAATCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
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| CDS TCA 72 bp | CTTCCAGCTTCAGTTCTTTCACCTTCTCCAATTCCGTaGATGACTTCAGTTTATTTCGGGAGAGGTTCAGGA | + |
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Preference number: 6 (lower is better) Translates to: LPASVLSPSPIP*MTSVYFGRGSG Trigger: TCCTGAACCTCTCCCGAAATAAACTGAAGTCATTCACGGAATTGGAGAAGGTGAAAGAACTGAAGCTGGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
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| CDS TCA 72 bp | CCTCACAATCAGCTCATCGTTCATGATGCAAATTCTTaGATCGCTGCAAGGGATAGCAATGAAGATCCTCGT | + |
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Preference number: 6 (lower is better) Translates to: PHNQLIVHDANS*IAARDSNEDPR Trigger: ACGAGGATCTTCATTGCTATCCCTTGCAGCGATTCAAGAATTTGCATCATGAACGATGAGCTGATTGTGAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113187.8 ENSMUST00000113189.8 |
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| CDS GCA 72 bp | CATCCTGAGGATTTCCTGTTGGTACTATTAGGTCCTTaGCATCCTGAGGATTTCCTGTCGGTACTATTAAGT | + |
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Preference number: 6 (lower is better) Translates to: HPEDFLLVLLGP*HPEDFLSVLLS Trigger: ACTTAATAGTACCGACAGGAAATCCTCAGGATGGCAAGGACCTAATAGTACCAACAGGAAATCCTCAGGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
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| CDS GCA 72 bp | GTGTGCTTCAGCAACTGCATTCGCATGCTTGAGTCTTaGTGCCTCTTTAGATCTCTGCTGTATTTGAAATAC | + |
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Preference number: 6 (lower is better) Translates to: VCFSNCIRMLES*CLFRSLLYLKY Trigger: GTATTTCAAATACAGCAGAGATCTAAAGAGGCAGCAAGACTCAAGCATGCGAATGCAGTTGCTGAAGCACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
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| CDS GCA 72 bp | AGCTCATCGTTCATGATGCAAATTCTGAAGGAAGAGTaGACTCTTGAATCGCTGCAAGGGATAGCAATGAAG | + |
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Preference number: 6 (lower is better) Translates to: SSSFMMQILKEE*TLESLQGIAMK Trigger: CTTCATTGCTATCCCTTGCAGCGATTCAAGAGTGCACTCTTCCTTCAGAATTTGCATCATGAACGATGAGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010085.4 |
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| CDS CAA 90 bp | TGCTGCCTCTTTAGATCTCTGCTGTATTTGAAATACTCTTCCAAGTaGTTCAGGTTTGGGTCACTGACATCGAAAGGAACTGACAAGGAG | + |
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Preference number: 6 (lower is better) Translates to: CCLFRSLLYLKYSSK*FRFGSLTSKGTDKE Trigger: CTCCTTGTCAGTTCCTTTCGATGTCAGTGACCCAAACCTGAACAACTTGGAAGAGTATTTCAAATACAGCAGAGATCTAAAGAGGCAGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
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| CDS TCA 72 bp | GTCAAGTTCAAGGACAACAGTTCAGGGATATCACTTTaGATGATCTGTAGTGTGGCAACCATGCAGCTTCTT | + |
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Preference number: 6 (lower is better) Translates to: VKFKDNSSGISL*MICSVATMQLL Trigger: AAGAAGCTGCATGGTTGCCACACTACAGATCATTCAAAGTGATATCCCTGAACTGTTGTCCTTGAACTTGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
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| CDS GCA 72 bp | CATCCTGAGGATTTCCTGTCGGTACTATTAAGTCCTTaGCATTCTGAAGATTTCTTGTCGGTACTATTAGGC | + |
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Preference number: 6 (lower is better) Translates to: HPEDFLSVLLSP*HSEDFLSVLLG Trigger: GCCTAATAGTACCGACAAGAAATCTTCAGAATGGCAAGGACTTAATAGTACCGACAGGAAATCCTCAGGATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
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| CDS GCA 72 bp | CCTCGATGTCCATTTTTGTTGGTACTATTAGGTCCTTaGCATCCTGAGGATTTCCTGTTGGTACTATTAGGT | + |
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Preference number: 6 (lower is better) Translates to: PRCPFLLVLLGP*HPEDFLLVLLG Trigger: ACCTAATAGTACCAACAGGAAATCCTCAGGATGGCAAGGACCTAATAGTACCAACAAAAATGGACATCGAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
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| CDS GCA 72 bp | TGCTTCAGCAACTGCATTCGCATGCTTGAGTCTTGCTaGCTCTTTAGATCTCTGCTGTATTTGAAATACTCT | + |
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Preference number: 6 (lower is better) Translates to: CFSNCIRMLESC*LFRSLLYLKYS Trigger: AGAGTATTTCAAATACAGCAGAGATCTAAAGAGGCAGCAAGACTCAAGCATGCGAATGCAGTTGCTGAAGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
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| CDS CAA 72 bp | GTACTATTAGGCCCTTGCCATTCTGAAGATTTCTTTTaGGTACTATTATGTCCTCGCCATCCAGACGCAACA | + |
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Preference number: 6 (lower is better) Translates to: VLLGPCHSEDFF*VLLCPRHPDAT Trigger: TGTTGCGTCTGGATGGCGAGGACATAATAGTACCAAAAAGAAATCTTCAGAATGGCAAGGGCCTAATAGTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
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| CDS CAA 72 bp | TATGACTTCAGATGTGTTACAGCTTTCCTTGCATGGTaGCGGGACCTCGATGTCCATTTTTGTTGGTACTAT | + |
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Preference number: 6 (lower is better) Translates to: YDFRCVTAFLAW*RDLDVHFCWYY Trigger: ATAGTACCAACAAAAATGGACATCGAGGTCCCGCAACCATGCAAGGAAAGCTGTAACACATCTGAAGTCATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
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| CDS TCA 72 bp | GCCATGTCTTCTCATACTTTCTTCCACTGGGAATTGTaGCCTTGTACCATTTCTCCTCAGTTTCATTTTCAG | + |
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Preference number: 6 (lower is better) Translates to: AMSSHTFFHWEL*PCTISPQFHFQ Trigger: CTGAAAATGAAACTGAGGAGAAATGGTACAAGGTCACAATTCCCAGTGGAAGAAAGTATGAGAAGACATGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
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| CDS CAA 72 bp | GTCTTCTCATACTTTCTTCCACTGGGAATTGTGACCTaGTACCATTTCTCCTCAGTTTCATTTTCAGCATCC | + |
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Preference number: 6 (lower is better) Translates to: VFSYFLPLGIVT*YHFSSVSFSAS Trigger: GGATGCTGAAAATGAAACTGAGGAGAAATGGTACAAGGTCACAATTCCCAGTGGAAGAAAGTATGAGAAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
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| CDS CAA 72 bp | TCGGTACTATTAAGTCCTTGCCATTCTGAAGATTTCTaGTCGGTACTATTAGGCCCTTGCCATTCTGAAGAT | + |
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Preference number: 6 (lower is better) Translates to: SVLLSPCHSEDF*SVLLGPCHSED Trigger: ATCTTCAGAATGGCAAGGGCCTAATAGTACCGACAAGAAATCTTCAGAATGGCAAGGACTTAATAGTACCGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
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| CDS CAA 90 bp | GATTTCCTGTCGGTACTATTAAGTCCTTGCCATTCTGAAGATTTCTaGTCGGTACTATTAGGCCCTTGCCATTCTGAAGATTTCTTTTTG | + |
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Preference number: 6 (lower is better) Translates to: DFLSVLLSPCHSEDF*SVLLGPCHSEDFFL Trigger: CAAAAAGAAATCTTCAGAATGGCAAGGGCCTAATAGTACCGACAAGAAATCTTCAGAATGGCAAGGACTTAATAGTACCGACAGGAAATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
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| CDS TCA 72 bp | ACTTGTTTTGCACAGAATAGGGCACAACAGAAGGACTaGCAAAGATCGCTATTTTTCTGCTTGTTTCATCAC | + |
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Preference number: 6 (lower is better) Translates to: TCFAQNRAQQKD*QRSLFFCLFHH Trigger: GTGATGAAACAAGCAGAAAAATAGCGATCTTTGTCAGTCCTTCTGTTGTGCCCTATTCTGTGCAAAACAAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
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| CDS TCA 72 bp | AGATTTCTTGTCGGTACTATTAGGCCCTTGCCATTCTaGAGATTTCTTTTTGGTACTATTATGTCCTCGCCA | + |
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Preference number: 6 (lower is better) Translates to: RFLVGTIRPLPF*RFLFGTIMSSP Trigger: TGGCGAGGACATAATAGTACCAAAAAGAAATCTTCAGAATGGCAAGGGCCTAATAGTACCGACAAGAAATCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
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| CDS TCA 72 bp | GTTCATCATAGATTCCCTTATGTACTCCATTTGTTCTaGTGTAAACTTGTTTTGCACAGAATAGGGCACAAC | + |
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Preference number: 6 (lower is better) Translates to: VHHRFPYVLHLF*CKLVLHRIGHN Trigger: GTTGTGCCCTATTCTGTGCAAAACAAGTTTACATCAGAACAAATGGAGTACATAAGGGAATCTATGATGAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
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| CDS CCA 72 bp | GCATCTTTCTCTCCTTCTTTTCATTCCCATGGCATATaGAGCACCATAATGATCAAAATGATTGTTCTTTCT | + |
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Preference number: 6 (lower is better) Translates to: ASFSPSFHSHGI*STIMIKMIVLS Trigger: AGAAAGAACAATCATTTTGATCATTATGGTGCTCCATATGCCATGGGAATGAAAAGAAGGAGAGAAAGATGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000010085.4 ENSMUST00000113187.8 ENSMUST00000113189.8 |
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