Pregenerated sensors for NXF1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000010097Ensembl transcript IDs: ENSMUST00000010241.14, ENSMUST00000183939.2, ENSMUST00000184756.2, ENSMUST00000184826.2, ENSMUST00000184970.9
Found 179 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGGCTGTGCCCGACAGGGTCATTTCTCTGTCTCCTTGGTAGCAGATaGCCCTGTGGCCTCCACGCCCAGCACTTGCCTTGGGATCCCCCT | + |
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Preference number: 1 (lower is better) Translates to: GLCPTGSFLCLLGSR*PCGLHAQHLPWDPP Trigger: AGGGGGATCCCAAGGCAAGTGCTGGGCGTGGAGGCCACAGGGGCATCTGCTACCAAGGAGACAGAGAAATGACCCTGTCGGGCACAGCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000184970.9 |
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| 3UTR GCA 90 bp | ATTGCCTTGAAGGCTGGCTCTGTTGTCTTGCTGCCTGATCCCGAGTaGCACAGGAGGGCACTCTCAGCCCAGGCTTTAAGCCTAGGGCTG | + |
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Preference number: 1 (lower is better) Translates to: IALKAGSVVLLPDPE*HRRALSAQALSLGL Trigger: CAGCCCTAGGCTTAAAGCCTGGGCTGAGAGTGCCCTCCTGTGGCACTCGGGATCAGGCAGCAAGACAACAGAGCCAGCCTTCAAGGCAAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184970.9 |
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| 3UTR CCA 90 bp | CCTGCTGTTCTGGGGAAAGCGTGGGTACTGGACTGGAGGAAGGTGTaGGTGCAGACATGGCGAAGGCTCTTTGGATTTCTTCAGGGCTGG | + |
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Preference number: 1 (lower is better) Translates to: PAVLGKAWVLDWRKV*VQTWRRLFGFLQGW Trigger: CCAGCCCTGAAGAAATCCAAAGAGCCTTCGCCATGTCTGCACCCACACCTTCCTCCAGTCCAGTACCCACGCTTTCCCCAGAACAGCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184970.9 |
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| 3UTR TCA 90 bp | TTGGGAAATCGTTCGCGAATGGCGCTGTCAAGAACGGGACAGAAGTaGGTGACGCTTCAGAGCCATCATGCCTCCTGGGCTGCTCTAGGA | + |
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Preference number: 1 (lower is better) Translates to: LGNRSRMALSRTGQK*VTLQSHHASWAALG Trigger: TCCTAGAGCAGCCCAGGAGGCATGATGGCTCTGAAGCGTCACTCACTTCTGTCCCGTTCTTGACAGCGCCATTCGCGAACGATTTCCCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184970.9 |
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| 3UTR GCA 90 bp | GGGACAGAAGTGAGTGACGCTTCAGAGCCATCATGCCTCCTGGGCTaGTCTAGGAGCAAATACACCAAAAACCCGAGGAACAGCCCATCC | + |
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Preference number: 1 (lower is better) Translates to: GTEVSDASEPSCLLG*SRSKYTKNPRNSPS Trigger: GGATGGGCTGTTCCTCGGGTTTTTGGTGTATTTGCTCCTAGAGCAGCCCAGGAGGCATGATGGCTCTGAAGCGTCACTCACTTCTGTCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000184970.9 |
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| 3UTR GCA 90 bp | CTGTTCTGGGGAAAGCGTGGGTACTGGACTGGAGGAAGGTGTGGGTaGAGACATGGCGAAGGCTCTTTGGATTTCTTCAGGGCTGGCATT | + |
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Preference number: 1 (lower is better) Translates to: LFWGKRGYWTGGRCG*RHGEGSLDFFRAGI Trigger: AATGCCAGCCCTGAAGAAATCCAAAGAGCCTTCGCCATGTCTGCACCCACACCTTCCTCCAGTCCAGTACCCACGCTTTCCCCAGAACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184970.9 |
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| 3UTR GCA 90 bp | GCTGTCAAGAACGGGACAGAAGTGAGTGACGCTTCAGAGCCATCATaGCTCCTGGGCTGCTCTAGGAGCAAATACACCAAAAACCCGAGG | + |
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Preference number: 1 (lower is better) Translates to: AVKNGTEVSDASEPS*LLGCSRSKYTKNPR Trigger: CCTCGGGTTTTTGGTGTATTTGCTCCTAGAGCAGCCCAGGAGGCATGATGGCTCTGAAGCGTCACTCACTTCTGTCCCGTTCTTGACAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000184970.9 |
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| 3UTR TCA 90 bp | AGTCACAGTTACAGGGTGGCCTCGGGCTGGACAGGAGACGGCAGATaGCAGCCAGACAATATTATCCAGGGGCTATTTACAAGGGGACTT | + |
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Preference number: 1 (lower is better) Translates to: SHSYRVASGWTGDGR*QPDNIIQGLFTRGL Trigger: AAGTCCCCTTGTAAATAGCCCCTGGATAATATTGTCTGGCTGTCATCTGCCGTCTCCTGTCCAGCCCGAGGCCACCCTGTAACTGTGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000010241.14 ENSMUST00000184826.2 ENSMUST00000184970.9 |
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| 3UTR CCA 90 bp | AGGAAAGGCCCAGTTCACAGCACTGGGCAAGAGAGACCAATAGCATaGTACCAGCCTCCAAGAGGCATCAACATCAGCATGGGCAGAAAG | + |
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Preference number: 1 (lower is better) Translates to: RKGPVHSTGQERPIA*YQPPRGINISMGRK Trigger: CTTTCTGCCCATGCTGATGTTGATGCCTCTTGGAGGCTGGTACCATGCTATTGGTCTCTCTTGCCCAGTGCTGTGAACTGGGCCTTTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184970.9 |
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| 3UTR CCA 90 bp | GGGAAACCCAGATTTCTTCTCCAGGAAAGGCCCAGTTCACAGCACTaGGCAAGAGAGACCAATAGCATGGTACCAGCCTCCAAGAGGCAT | + |
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Preference number: 1 (lower is better) Translates to: GKPRFLLQERPSSQH*ARETNSMVPASKRH Trigger: ATGCCTCTTGGAGGCTGGTACCATGCTATTGGTCTCTCTTGCCCAGTGCTGTGAACTGGGCCTTTCCTGGAGAAGAAATCTGGGTTTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184970.9 |
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| 3UTR CCA 90 bp | GCCACAGCCTTGGCTAAGTGGATCATGAAAATAAAGAGTCCCTCTTaGTACAACGGCAAGAGGGACCATGAAAGGACAAAGGAAGGCCTG | + |
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Preference number: 1 (lower is better) Translates to: ATALAKWIMKIKSPS*YNGKRDHERTKEGL Trigger: CAGGCCTTCCTTTGTCCTTTCATGGTCCCTCTTGCCGTTGTACCAAGAGGGACTCTTTATTTTCATGATCCACTTAGCCAAGGCTGTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184970.9 |
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| 3UTR CCA 90 bp | AACATCAGCATGGGCAGAAAGGACCAGGCCACAGCCTTGGCTAAGTaGATCATGAAAATAAAGAGTCCCTCTTGGTACAACGGCAAGAGG | + |
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Preference number: 1 (lower is better) Translates to: NISMGRKDQATALAK*IMKIKSPSWYNGKR Trigger: CCTCTTGCCGTTGTACCAAGAGGGACTCTTTATTTTCATGATCCACTTAGCCAAGGCTGTGGCCTGGTCCTTTCTGCCCATGCTGATGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184970.9 |
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| 3UTR TCA 90 bp | CATGAAAATAAAGAGTCCCTCTTGGTACAACGGCAAGAGGGACCATaGAAGGACAAAGGAAGGCCTGTCTCAGTAGACAGCCCCAGTAAG | + |
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Preference number: 1 (lower is better) Translates to: HENKESLLVQRQEGP*KDKGRPVSVDSPSK Trigger: CTTACTGGGGCTGTCTACTGAGACAGGCCTTCCTTTGTCCTTTCATGGTCCCTCTTGCCGTTGTACCAAGAGGGACTCTTTATTTTCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184970.9 |
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| 3UTR CCA 90 bp | CTAAGTCCTTCGGGTAGTTTAGTGTCAGCTCTACAAAGTAAGCTTTaGCTTCCTGGCACCATGAGGCTCAATCTTCCGGAAGTCTTCTCT | + |
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Preference number: 1 (lower is better) Translates to: LSPSGSLVSALQSKL*LPGTMRLNLPEVFS Trigger: AGAGAAGACTTCCGGAAGATTGAGCCTCATGGTGCCAGGAAGCCAAAGCTTACTTTGTAGAGCTGACACTAAACTACCCGAAGGACTTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010241.14 ENSMUST00000184826.2 ENSMUST00000184970.9 |
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| 3UTR CCA 90 bp | GTGTGGGTGCAGACATGGCGAAGGCTCTTTGGATTTCTTCAGGGCTaGCATTCCGCACAAATAATTCATCATTTACAATACATAGCCCTG | + |
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Preference number: 1 (lower is better) Translates to: VWVQTWRRLFGFLQG*HSAQIIHHLQYIAL Trigger: CAGGGCTATGTATTGTAAATGATGAATTATTTGTGCGGAATGCCAGCCCTGAAGAAATCCAAAGAGCCTTCGCCATGTCTGCACCCACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184970.9 |
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| 3UTR GCA 90 bp | GTTTTGGGTAACTCATTGAGGAAGGCAACGACATTAAGACGTGTATaGTTTAAGAGTCGGAACCGCTGGGTGGGTTCTTTAAGCTTCTTC | + |
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Preference number: 1 (lower is better) Translates to: VLGNSLRKATTLRRV*FKSRNRWVGSLSFF Trigger: GAAGAAGCTTAAAGAACCCACCCAGCGGTTCCGACTCTTAAAGCATACACGTCTTAATGTCGTTGCCTTCCTCAATGAGTTACCCAAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184970.9 |
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| 3UTR CCA 90 bp | AAGGCAACGACATTAAGACGTGTATGCTTTAAGAGTCGGAACCGCTaGGTGGGTTCTTTAAGCTTCTTCACATTTCTGCTGTCTTTGACA | + |
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Preference number: 1 (lower is better) Translates to: KATTLRRVCFKSRNR*VGSLSFFTFLLSLT Trigger: TGTCAAAGACAGCAGAAATGTGAAGAAGCTTAAAGAACCCACCCAGCGGTTCCGACTCTTAAAGCATACACGTCTTAATGTCGTTGCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184970.9 |
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| 3UTR TCA 90 bp | CTTGTTTGGGCACTTATATCTACCACGAAGGCGTTAACGTCATGTTaGGTTTTGGGTAACTCATTGAGGAAGGCAACGACATTAAGACGT | + |
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Preference number: 1 (lower is better) Translates to: LVWALISTTKALTSC*VLGNSLRKATTLRR Trigger: ACGTCTTAATGTCGTTGCCTTCCTCAATGAGTTACCCAAAACTCAACATGACGTTAACGCCTTCGTGGTAGATATAAGTGCCCAAACAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184970.9 |
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| 3UTR CAA 90 bp | AGGGGCACCCCCTTCTTAATTGCCTTGAAGGCTGGCTCTGTTGTCTaGCTGCCTGATCCCGAGTGCCACAGGAGGGCACTCTCAGCCCAG | + |
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Preference number: 2 (lower is better) Translates to: RGTPFLIALKAGSVV*LPDPECHRRALSAQ Trigger: CTGGGCTGAGAGTGCCCTCCTGTGGCACTCGGGATCAGGCAGCAAGACAACAGAGCCAGCCTTCAAGGCAATTAAGAAGGGGGTGCCCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000184970.9 |
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| 3UTR-3UTR TCA 90 bp | CCATCCTGCTTATCGCCCACTCCTCCCCAACTTAAACATGGGGACAAGAACCCCTGTGAGGTGTGCGAGTaGGGGAGGGGCTGTGCCCGA | + |
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Preference number: 2 (lower is better) Translates to: PSCLSPTPPQLKHGDKNPCEVCE*GRGCAR Trigger: TCGGGCACAGCCCCTCCCTCACTCGCACACCTCACA...GGGGTTCTTGTCCCCATGTTTAAGTTGGGGAGGAGTGGGCGATAAGCAGGATGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENSMUST00000184970.9 |
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| 3UTR-3UTR TCA 90 bp | GGGAGGGGCTGTGCCCGACAGGGTCATTTCTCTGTCTCCTTGGTAGCAGATGCCCGGCAAGAGGGACCATaGAAGGACAAAGGAAGGCCT | + |
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Preference number: 2 (lower is better) Translates to: GRGCARQGHFSVSLVADARQEGP*KDKGRP Trigger: AGGCCTTCCTTTGTCCTTTCATGGTCCCTCTTGCCG...GGCATCTGCTACCAAGGAGACAGAGAAATGACCCTGTCGGGCACAGCCCCTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184970.9 |
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| 3UTR-3UTR CCA 90 bp | CGAGTGCCACAGGAGGGCACTCTCAGCCCAGGCTTTAAGCCTAGGGCTGCCTTCATTTGCAGTTGCTGTTaGCCAGGTCTCTGTCTGCTC | + |
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Preference number: 2 (lower is better) Translates to: RVPQEGTLSPGFKPRAAFICSCC*PGLCLL Trigger: GAGCAGACAGAGACCTGGCCAACAGCAACTGCAAAT...GAAGGCAGCCCTAGGCTTAAAGCCTGGGCTGAGAGTGCCCTCCTGTGGCACTCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184970.9 |
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| 3UTR-3UTR TCA 90 bp | CGAGTGCCACAGGAGGGCACTCTCAGCCCAGGCTTTAAGCCTAGGGCTGCCTTCACAGGAGACGGCAGATaGCAGCCAGACAATATTATC | + |
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Preference number: 2 (lower is better) Translates to: RVPQEGTLSPGFKPRAAFTGDGR*QPDNII Trigger: GATAATATTGTCTGGCTGTCATCTGCCGTCTCCTGT...GAAGGCAGCCCTAGGCTTAAAGCCTGGGCTGAGAGTGCCCTCCTGTGGCACTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184970.9 |
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| 3UTR-3UTR GCA 90 bp | AGTTCTTGGTGGTCCCATCTTGACTGGTGCCAGCCCCTCCTCTCTCTGCAGGAGATTCGATCTCGATCATaGCAACCATCTCCCCGACGA | + |
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Preference number: 2 (lower is better) Translates to: SSWWSHLDWCQPLLSLQEIRSRS*QPSPRR Trigger: TCGTCGGGGAGATGGTTGGCATGATCGAGATCGAAT...CTCCTGCAGAGAGAGGAGGGGCTGGCACCAGTCAAGATGGGACCACCAAGAACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184756.2 |
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| 3UTR-3UTR CCA 90 bp | GCTGGCTCTGTTGTCTTGCTGCCTGATCCCGAGTGCCACAGGAGGGCACTCTCATATGGCACAGGATGTTaGGGCAAGGAGATGAACAAG | + |
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Preference number: 2 (lower is better) Translates to: AGSVVLLPDPECHRRALSYGTGC*GKEMNK Trigger: CTTGTTCATCTCCTTGCCCCAACATCCTGTGCCATA...TGAGAGTGCCCTCCTGTGGCACTCGGGATCAGGCAGCAAGACAACAGAGCCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184970.9 |
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| 3UTR CAA 90 bp | GGCCTTCGCCAAGACCAGAACACACCACAAGTATGGCACAGGATGTaGGGGCAAGGAGATGAACAAGACAGGGCTCAAGGAGGAGGAAAG | + |
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Preference number: 2 (lower is better) Translates to: GLRQDQNTPQVWHRM*GQGDEQDRAQGGGK Trigger: CTTTCCTCCTCCTTGAGCCCTGTCTTGTTCATCTCCTTGCCCCAACATCCTGTGCCATACTTGTGGTGTGTTCTGGTCTTGGCGAAGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184970.9 |
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| 3UTR-3UTR TCA 90 bp | TCATGGCCATCCAGGCGTAATAACTTGGGAAATCGTTCGCGAATGGCGCTGTCAGGCTTCCTGGCACCATaGGGCTCAATCTTCCGGAAG | + |
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Preference number: 2 (lower is better) Translates to: SWPSRRNNLGNRSRMALSGFLAP*GSIFRK Trigger: CTTCCGGAAGATTGAGCCTCATGGTGCCAGGAAGCC...TGACAGCGCCATTCGCGAACGATTTCCCAAGTTATTACGCCTGGATGGCCATGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184970.9 |
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| 3UTR-3UTR TCA 90 bp | CGTAATAACTTGGGAAATCGTTCGCGAATGGCGCTGTCAAGAACGGGACAGAAGCCCCAAGTTCTCTCCTaGTGGCCCCTCTGCGACTGT | + |
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Preference number: 2 (lower is better) Translates to: RNNLGNRSRMALSRTGQKPQVLS*WPLCDC Trigger: ACAGTCGCAGAGGGGCCATCAGGAGAGAACTTGGGG...CTTCTGTCCCGTTCTTGACAGCGCCATTCGCGAACGATTTCCCAAGTTATTACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184970.9 |
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| 3UTR-3UTR TCA 90 bp | GTTCTTGGTGGTCCCATCTTGACTGGTGCCAGCCCCTCCTCTCTCTGCAGGAGCCTCCGTACAGTAATATaGATTCGATCTCGATCATGC | + |
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Preference number: 2 (lower is better) Translates to: VLGGPILTGASPSSLCRSLRTVI*IRSRSC Trigger: GCATGATCGAGATCGAATTCATATTACTGTACGGAG...GCTCCTGCAGAGAGAGGAGGGGCTGGCACCAGTCAAGATGGGACCACCAAGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184756.2 |
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| 3UTR-3UTR CCA 90 bp | CGAGTGCCACAGGAGGGCACTCTCAGCCCAGGCTTTAAGCCTAGGGCTGCCTTCACAGCCTTGGCTAAGTaGATCATGAAAATAAAGAGT | + |
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Preference number: 2 (lower is better) Translates to: RVPQEGTLSPGFKPRAAFTALAK*IMKIKS Trigger: ACTCTTTATTTTCATGATCCACTTAGCCAAGGCTGT...GAAGGCAGCCCTAGGCTTAAAGCCTGGGCTGAGAGTGCCCTCCTGTGGCACTCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184970.9 |
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| 3UTR-3UTR CCA 90 bp | TTAGGGAAACCCAGATTTCTTCTCCAGGAAAGGCCCAGTTCACAGCACTGGGCAGCATCAACATCAGCATaGGCAGAAAGGACCAGGCCA | + |
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Preference number: 2 (lower is better) Translates to: LGKPRFLLQERPSSQHWAASTSA*AERTRP Trigger: TGGCCTGGTCCTTTCTGCCCATGCTGATGTTGATGC...TGCCCAGTGCTGTGAACTGGGCCTTTCCTGGAGAAGAAATCTGGGTTTCCCTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184970.9 |
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| 3UTR-3UTR CCA 90 bp | TCATGGCCATCCAGGCGTAATAACTTGGGAAATCGTTCGCGAATGGCGCTGTCAAGCCATCATGCCTCCTaGGCTGCTCTAGGAGCAAAT | + |
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Preference number: 2 (lower is better) Translates to: SWPSRRNNLGNRSRMALSSHHAS*AALGAN Trigger: ATTTGCTCCTAGAGCAGCCCAGGAGGCATGATGGCT...TGACAGCGCCATTCGCGAACGATTTCCCAAGTTATTACGCCTGGATGGCCATGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184970.9 |
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| 3UTR CAA 90 bp | ACCATAAGGAATTGTAATCTTGAACCAGTTCTTGGTGGTCCCATCTaGACTGGTGCCAGCCCCTCCTCTCTCTGCAGGAGCTCTGTCTCT | + |
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Preference number: 2 (lower is better) Translates to: TIRNCNLEPVLGGPI*TGASPSSLCRSSVS Trigger: AGAGACAGAGCTCCTGCAGAGAGAGGAGGGGCTGGCACCAGTCAAGATGGGACCACCAAGAACTGGTTCAAGATTACAATTCCTTATGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184756.2 |
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| 3UTR-3UTR CCA 90 bp | TTAGGGAAACCCAGATTTCTTCTCCAGGAAAGGCCCAGTTCACAGCACTGGGCACTACAAAGTAAGCTTTaGCTTCCTGGCACCATGAGG | + |
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Preference number: 2 (lower is better) Translates to: LGKPRFLLQERPSSQHWALQSKL*LPGTMR Trigger: CCTCATGGTGCCAGGAAGCCAAAGCTTACTTTGTAG...TGCCCAGTGCTGTGAACTGGGCCTTTCCTGGAGAAGAAATCTGGGTTTCCCTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184970.9 |
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| 3UTR-3UTR CCA 90 bp | TCATGGCCATCCAGGCGTAATAACTTGGGAAATCGTTCGCGAATGGCGCTGTCAGCTGCCCTTTTCCTGTaGTCCCAAGGTAGAAATGAA | + |
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Preference number: 2 (lower is better) Translates to: SWPSRRNNLGNRSRMALSAALFL*SQGRNE Trigger: TTCATTTCTACCTTGGGACCACAGGAAAAGGGCAGC...TGACAGCGCCATTCGCGAACGATTTCCCAAGTTATTACGCCTGGATGGCCATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184970.9 |
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| 3UTR-3UTR GCA 90 bp | GGCACCCCCTTCTTAATTGCCTTGAAGGCTGGCTCTGTTGTCTTGCTGCCTGATAATCCTATAATGATTTaGAGTTGCTGTTGGCCAGGT | + |
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Preference number: 2 (lower is better) Translates to: GTPFLIALKAGSVVLLPDNPIMI*SCCWPG Trigger: ACCTGGCCAACAGCAACTGCAAATCATTATAGGATT...ATCAGGCAGCAAGACAACAGAGCCAGCCTTCAAGGCAATTAAGAAGGGGGTGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000184970.9 |
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| 3UTR CAA 90 bp | CGTAAAGAATCTCGAGACTTCCCATCCACTTCCTTGAAGACTCCATaGACAGAAAAACACAGTAATGTGCTTGTTTGGGCACTTATATCT | + |
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Preference number: 2 (lower is better) Translates to: RKESRDFPSTSLKTP*TEKHSNVLVWALIS Trigger: AGATATAAGTGCCCAAACAAGCACATTACTGTGTTTTTCTGTCAATGGAGTCTTCAAGGAAGTGGATGGGAAGTCTCGAGATTCTTTACG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000184970.9 |
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| 3UTR GCA 72 bp | CCGACAGGGTCATTTCTCTGTCTCCTTGGTAGCAGATaGCCCTGTGGCCTCCACGCCCAGCACTTGCCTTGG | + |
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Preference number: 3 (lower is better) Translates to: PTGSFLCLLGSR*PCGLHAQHLPW Trigger: CCAAGGCAAGTGCTGGGCGTGGAGGCCACAGGGGCATCTGCTACCAAGGAGACAGAGAAATGACCCTGTCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184970.9 |
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| 3UTR TCA 72 bp | CGCGAATGGCGCTGTCAAGAACGGGACAGAAGTGAGTaGCGCTTCAGAGCCATCATGCCTCCTGGGCTGCTC | + |
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Preference number: 3 (lower is better) Translates to: REWRCQERDRSE*RFRAIMPPGLL Trigger: GAGCAGCCCAGGAGGCATGATGGCTCTGAAGCGTCACTCACTTCTGTCCCGTTCTTGACAGCGCCATTCGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184970.9 |
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| 3UTR GCA 72 bp | AAGGCTGGCTCTGTTGTCTTGCTGCCTGATCCCGAGTaGCACAGGAGGGCACTCTCAGCCCAGGCTTTAAGC | + |
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Preference number: 3 (lower is better) Translates to: KAGSVVLLPDPE*HRRALSAQALS Trigger: GCTTAAAGCCTGGGCTGAGAGTGCCCTCCTGTGGCACTCGGGATCAGGCAGCAAGACAACAGAGCCAGCCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184970.9 |
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| 3UTR TCA 72 bp | AATTGCCTTGAAGGCTGGCTCTGTTGTCTTGCTGCCTaGTCCCGAGTGCCACAGGAGGGCACTCTCAGCCCA | + |
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Preference number: 3 (lower is better) Translates to: NCLEGWLCCLAA*SRVPQEGTLSP Trigger: TGGGCTGAGAGTGCCCTCCTGTGGCACTCGGGATCAGGCAGCAAGACAACAGAGCCAGCCTTCAAGGCAATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184970.9 |
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| 3UTR TCA 72 bp | CGTTCGCGAATGGCGCTGTCAAGAACGGGACAGAAGTaGGTGACGCTTCAGAGCCATCATGCCTCCTGGGCT | + |
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Preference number: 3 (lower is better) Translates to: RSRMALSRTGQK*VTLQSHHASWA Trigger: AGCCCAGGAGGCATGATGGCTCTGAAGCGTCACTCACTTCTGTCCCGTTCTTGACAGCGCCATTCGCGAACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184970.9 |
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| 3UTR CCA 72 bp | GCTGCCTCACCAGGTATCCACCAGTTCTGCCAGGTCTaGCCTTCGCCAAGACCAGAACACACCACAAGTATG | + |
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Preference number: 3 (lower is better) Translates to: AASPGIHQFCQV*PSPRPEHTTSM Trigger: CATACTTGTGGTGTGTTCTGGTCTTGGCGAAGGCCAGACCTGGCAGAACTGGTGGATACCTGGTGAGGCAGC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184970.9 |
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| 3UTR-3UTR CAA 90 bp | AGCGTGGGTACTGGACTGGAGGAAGGTGTGGGTGCAGACATGGCGAAGGCTCTTGTATGGCACAGGATGTaGGGGCAAGGAGATGAACAA | + |
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Preference number: 3 (lower is better) Translates to: SVGTGLEEGVGADMAKALVWHRM*GQGDEQ Trigger: TTGTTCATCTCCTTGCCCCAACATCCTGTGCCATAC...AAGAGCCTTCGCCATGTCTGCACCCACACCTTCCTCCAGTCCAGTACCCACGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184970.9 |
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| 3UTR CCA 72 bp | GAGGGGGTAGCTCATGGCCATCCAGGCGTAATAACTTaGGAAATCGTTCGCGAATGGCGCTGTCAAGAACGG | + |
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Preference number: 3 (lower is better) Translates to: EGVAHGHPGVIT*EIVREWRCQER Trigger: CCGTTCTTGACAGCGCCATTCGCGAACGATTTCCCAAGTTATTACGCCTGGATGGCCATGAGCTACCCCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000184970.9 |
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| 3UTR CCA 72 bp | CTGGGGAAAGCGTGGGTACTGGACTGGAGGAAGGTGTaGGTGCAGACATGGCGAAGGCTCTTTGGATTTCTT | + |
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Preference number: 3 (lower is better) Translates to: LGKAWVLDWRKV*VQTWRRLFGFL Trigger: AAGAAATCCAAAGAGCCTTCGCCATGTCTGCACCCACACCTTCCTCCAGTCCAGTACCCACGCTTTCCCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184970.9 |
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| 3UTR TCA 72 bp | TACAGGGTGGCCTCGGGCTGGACAGGAGACGGCAGATaGCAGCCAGACAATATTATCCAGGGGCTATTTACA | + |
|
Preference number: 3 (lower is better) Translates to: YRVASGWTGDGR*QPDNIIQGLFT Trigger: TGTAAATAGCCCCTGGATAATATTGTCTGGCTGTCATCTGCCGTCTCCTGTCCAGCCCGAGGCCACCCTGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010241.14 ENSMUST00000184826.2 ENSMUST00000184970.9 |
||
| 3UTR GCA 72 bp | GTGAGTGACGCTTCAGAGCCATCATGCCTCCTGGGCTaGTCTAGGAGCAAATACACCAAAAACCCGAGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: VSDASEPSCLLG*SRSKYTKNPRN Trigger: GTTCCTCGGGTTTTTGGTGTATTTGCTCCTAGAGCAGCCCAGGAGGCATGATGGCTCTGAAGCGTCACTCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000184970.9 |
||
| 3UTR GCA 72 bp | AACGGGACAGAAGTGAGTGACGCTTCAGAGCCATCATaGCTCCTGGGCTGCTCTAGGAGCAAATACACCAAA | + |
|
Preference number: 3 (lower is better) Translates to: NGTEVSDASEPS*LLGCSRSKYTK Trigger: TTTGGTGTATTTGCTCCTAGAGCAGCCCAGGAGGCATGATGGCTCTGAAGCGTCACTCACTTCTGTCCCGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184970.9 |
||
| 3UTR CCA 72 bp | CCAGTTCACAGCACTGGGCAAGAGAGACCAATAGCATaGTACCAGCCTCCAAGAGGCATCAACATCAGCATG | + |
|
Preference number: 3 (lower is better) Translates to: PVHSTGQERPIA*YQPPRGINISM Trigger: CATGCTGATGTTGATGCCTCTTGGAGGCTGGTACCATGCTATTGGTCTCTCTTGCCCAGTGCTGTGAACTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184970.9 |
||
| 3UTR CCA 72 bp | AGATTTCTTCTCCAGGAAAGGCCCAGTTCACAGCACTaGGCAAGAGAGACCAATAGCATGGTACCAGCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: RFLLQERPSSQH*ARETNSMVPAS Trigger: GGAGGCTGGTACCATGCTATTGGTCTCTCTTGCCCAGTGCTGTGAACTGGGCCTTTCCTGGAGAAGAAATCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184970.9 |
||
| 3UTR-3UTR CAA 90 bp | TCATGGCCATCCAGGCGTAATAACTTGGGAAATCGTTCGCGAATGGCGCTGTCACATTTCTCTGTCTCCTaGGTAGCAGATGCCCCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: SWPSRRNNLGNRSRMALSHFSVS*VADAPV Trigger: CACAGGGGCATCTGCTACCAAGGAGACAGAGAAATG...TGACAGCGCCATTCGCGAACGATTTCCCAAGTTATTACGCCTGGATGGCCATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184970.9 |
||
| 3UTR-3UTR CAA 90 bp | TGGGTACTGGACTGGAGGAAGGTGTGGGTGCAGACATGGCGAAGGCTCTTTGGAGTTTTGGGTAACTCATaGAGGAAGGCAACGACATTA | + |
|
Preference number: 3 (lower is better) Translates to: WVLDWRKVWVQTWRRLFGVLGNS*RKATTL Trigger: TAATGTCGTTGCCTTCCTCAATGAGTTACCCAAAAC...TCCAAAGAGCCTTCGCCATGTCTGCACCCACACCTTCCTCCAGTCCAGTACCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184970.9 |
||
| 3UTR TCA 72 bp | AAAGAGTCCCTCTTGGTACAACGGCAAGAGGGACCATaGAAGGACAAAGGAAGGCCTGTCTCAGTAGACAGC | + |
|
Preference number: 3 (lower is better) Translates to: KESLLVQRQEGP*KDKGRPVSVDS Trigger: GCTGTCTACTGAGACAGGCCTTCCTTTGTCCTTTCATGGTCCCTCTTGCCGTTGTACCAAGAGGGACTCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184970.9 |
||
| 3UTR CCA 72 bp | GAGGAAGGTGTGGGTGCAGACATGGCGAAGGCTCTTTaGATTTCTTCAGGGCTGGCATTCCGCACAAATAAT | + |
|
Preference number: 3 (lower is better) Translates to: EEGVGADMAKAL*ISSGLAFRTNN Trigger: ATTATTTGTGCGGAATGCCAGCCCTGAAGAAATCCAAAGAGCCTTCGCCATGTCTGCACCCACACCTTCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184970.9 |
||
| 3UTR-3UTR CAA 90 bp | AGCGTGGGTACTGGACTGGAGGAAGGTGTGGGTGCAGACATGGCGAAGGCTCTTAACACAGTAATGTGCTaGTTTGGGCACTTATATCTA | + |
|
Preference number: 3 (lower is better) Translates to: SVGTGLEEGVGADMAKALNTVMC*FGHLYL Trigger: TAGATATAAGTGCCCAAACAAGCACATTACTGTGTT...AAGAGCCTTCGCCATGTCTGCACCCACACCTTCCTCCAGTCCAGTACCCACGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184970.9 |
||
| 3UTR TCA 72 bp | CTCTCTGCAGGAGCTCTGTCTCTCCGTACAGTAATATaGATTCGATCTCGATCATGCCAACCATCTCCCCGA | + |
|
Preference number: 3 (lower is better) Translates to: LSAGALSLRTVI*IRSRSCQPSPR Trigger: TCGGGGAGATGGTTGGCATGATCGAGATCGAATTCATATTACTGTACGGAGAGACAGAGCTCCTGCAGAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184756.2 |
||
| 3UTR GCA 72 bp | AACTCATTGAGGAAGGCAACGACATTAAGACGTGTATaGTTTAAGAGTCGGAACCGCTGGGTGGGTTCTTTA | + |
|
Preference number: 3 (lower is better) Translates to: NSLRKATTLRRV*FKSRNRWVGSL Trigger: TAAAGAACCCACCCAGCGGTTCCGACTCTTAAAGCATACACGTCTTAATGTCGTTGCCTTCCTCAATGAGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184970.9 |
||
| 3UTR TCA 72 bp | GCACTTATATCTACCACGAAGGCGTTAACGTCATGTTaGGTTTTGGGTAACTCATTGAGGAAGGCAACGACA | + |
|
Preference number: 3 (lower is better) Translates to: ALISTTKALTSC*VLGNSLRKATT Trigger: TGTCGTTGCCTTCCTCAATGAGTTACCCAAAACTCAACATGACGTTAACGCCTTCGTGGTAGATATAAGTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184970.9 |
||
| 3UTR CCA 72 bp | TTGGCTAAGTGGATCATGAAAATAAAGAGTCCCTCTTaGTACAACGGCAAGAGGGACCATGAAAGGACAAAG | + |
|
Preference number: 3 (lower is better) Translates to: LAKWIMKIKSPS*YNGKRDHERTK Trigger: CTTTGTCCTTTCATGGTCCCTCTTGCCGTTGTACCAAGAGGGACTCTTTATTTTCATGATCCACTTAGCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184970.9 |
||
| 3UTR CCA 72 bp | ACATTAAGACGTGTATGCTTTAAGAGTCGGAACCGCTaGGTGGGTTCTTTAAGCTTCTTCACATTTCTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: TLRRVCFKSRNR*VGSLSFFTFLL Trigger: CAGCAGAAATGTGAAGAAGCTTAAAGAACCCACCCAGCGGTTCCGACTCTTAAAGCATACACGTCTTAATGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184970.9 |
||
| CDS-3UTR TCA 90 bp | AGCAGCCCTTCCTCCTCAGTCACAGTTACAGGGTGGCCTCGGGCTGGACAGGAGTTGGTGGTCCCATCTTaGCTGGTGCCAGCCCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SSPSSSVTVTGWPRAGQELVVPS*LVPAPP Trigger: AGGAGGGGCTGGCACCAGTCAAGATGGGACCACCAA...CTCCTGTCCAGCCCGAGGCCACCCTGTAACTGTGACTGAGGAGGAAGGGCTGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010241.14 ENSMUST00000184970.9 |
||
| CDS-3UTR TCA 90 bp | CCCTTCCTCCTCAGTCACAGTTACAGGGTGGCCTCGGGCTGGACAGGAGACGGCCTGAGCGGAGCCCCTTaGGGTCAAGTGCTTGTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PFLLSHSYRVASGWTGDGLSGAP*GQVLVG Trigger: ACCAACAAGCACTTGACCTCAAGGGGCTCCGCTCAG...GCCGTCTCCTGTCCAGCCCGAGGCCACCCTGTAACTGTGACTGAGGAGGAAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010241.14 ENSMUST00000184970.9 |
||
| CDS-3UTR GCA 90 bp | GCAGCCCTTCCTCCTCAGTCACAGTTACAGGGTGGCCTCGGGCTGGACAGGAGAGATCCGCAGGGTGGCTaGCATACAGCTTCTGCGGTT | + |
|
Preference number: 4 (lower is better) Translates to: AALPPQSQLQGGLGLDRRDPQGG*HTASAV Trigger: AACCGCAGAAGCTGTATGGCAGCCACCCTGCGGATC...TCTCCTGTCCAGCCCGAGGCCACCCTGTAACTGTGACTGAGGAGGAAGGGCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010241.14 ENSMUST00000184970.9 |
||
| CDS-3UTR CCA 90 bp | GAAGCAGCCCTTCCTCCTCAGTCACAGTTACAGGGTGGCCTCGGGCTGGACAGGGACTGGAGGAAGGTGTaGGTGCAGACATGGCGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: EAALPPQSQLQGGLGLDRDWRKV*VQTWRR Trigger: CCTTCGCCATGTCTGCACCCACACCTTCCTCCAGTC...CCTGTCCAGCCCGAGGCCACCCTGTAACTGTGACTGAGGAGGAAGGGCTGCTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010241.14 ENSMUST00000184826.2 |
||
| CDS-3UTR GCA 90 bp | AGCCCTTCCTCCTCAGTCACAGTTACAGGGTGGCCTCGGGCTGGACAGGAGACGGTTCCAGCTCAGGGCTaGATGTTCTCCTGTAGACGG | + |
|
Preference number: 4 (lower is better) Translates to: SPSSSVTVTGWPRAGQETVPAQG*MFSCRR Trigger: CCGTCTACAGGAGAACATGCAGCCCTGAGCTGGAAC...CGTCTCCTGTCCAGCCCGAGGCCACCCTGTAACTGTGACTGAGGAGGAAGGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184970.9 |
||
| CDS-3UTR GCA 90 bp | TGGGTACTGGACTGGAGGAAGGTGTGGGTGCAGACATGGCGAAGGCTCTTTGGAAGCCCCTCCTCTCTCTaGAGGAGCTCTGTCTCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: WVLDWRKVWVQTWRRLFGSPSSL*RSSVSP Trigger: CGGAGAGACAGAGCTCCTGCAGAGAGAGGAGGGGCT...TCCAAAGAGCCTTCGCCATGTCTGCACCCACACCTTCCTCCAGTCCAGTACCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184970.9 |
||
| CDS-3UTR CCA 90 bp | AGCAGCCCTTCCTCCTCAGTCACAGTTACAGGGTGGCCTCGGGCTGGACAGGAGCATTTCCTGCTGTTCTaGGGAAAGCGTGGGTACTGG | + |
|
Preference number: 4 (lower is better) Translates to: SSPSSSVTVTGWPRAGQEHFLLF*GKRGYW Trigger: CCAGTACCCACGCTTTCCCCAGAACAGCAGGAAATG...CTCCTGTCCAGCCCGAGGCCACCCTGTAACTGTGACTGAGGAGGAAGGGCTGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010241.14 ENSMUST00000184826.2 |
||
| CDS-3UTR TCA 90 bp | AGCAGCCCTTCCTCCTCAGTCACAGTTACAGGGTGGCCTCGGGCTGGACAGGAGAGGCTACAACTGACCTaGTATAGCTGGACTGGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SSPSSSVTVTGWPRAGQERLQLT*YSWTGL Trigger: GAGACCAGTCCAGCTATATCAGGTCAGTTGTAGCCT...CTCCTGTCCAGCCCGAGGCCACCCTGTAACTGTGACTGAGGAGGAAGGGCTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184970.9 |
||
| CDS-3UTR GCA 90 bp | GAAGCAGCCCTTCCTCCTCAGTCACAGTTACAGGGTGGCCTCGGGCTGGACAGGCTTCAGGGCCTGAATTaGTGGCAGGAACAGCAATGN | + |
|
Preference number: 4 (lower is better) Translates to: EAALPPQSQLQGGLGLDRLQGLN*WQEQQX Trigger: NCATTGCTGTTCCTGCCAGCAATTCAGGCCCTGAAG...CCTGTCCAGCCCGAGGCCACCCTGTAACTGTGACTGAGGAGGAAGGGCTGCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184826.2 |
||
| CDS-3UTR GCA 90 bp | GCCCTTCCTCCTCAGTCACAGTTACAGGGTGGCCTCGGGCTGGACAGGAGACGGAGGGGACACTGCATTTaGTCTGAATCATGCTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: ALPPQSQLQGGLGLDRRRRGHCI*SESCSE Trigger: TTCTGAGCATGATTCAGAGCAAATGCAGTGTCCCCT...CCGTCTCCTGTCCAGCCCGAGGCCACCCTGTAACTGTGACTGAGGAGGAAGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010241.14 ENSMUST00000184970.9 |
||
| CDS-3UTR CCA 90 bp | GCAGCCCTTCCTCCTCAGTCACAGTTACAGGGTGGCCTCGGGCTGGACAGGAGACGAAGTTGTCACACATaGGGTTTCTGTCAAGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: AALPPQSQLQGGLGLDRRRSCHT*GFCQAT Trigger: TGTGGCTTGACAGAAACCCCATGTGTGACAACTTCG...TCTCCTGTCCAGCCCGAGGCCACCCTGTAACTGTGACTGAGGAGGAAGGGCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010241.14 ENSMUST00000184970.9 |
||
| CDS-3UTR CCA 90 bp | GAAGCAGCCCTTCCTCCTCAGTCACAGTTACAGGGTGGCCTCGGGCTGGACAGGCCAGGCGTAATAACTTaGGAAATCGTTCGCGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: EAALPPQSQLQGGLGLDRPGVIT*EIVREW Trigger: CCATTCGCGAACGATTTCCCAAGTTATTACGCCTGG...CCTGTCCAGCCCGAGGCCACCCTGTAACTGTGACTGAGGAGGAAGGGCTGCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010241.14 |
||
| CDS-3UTR CCA 90 bp | CCCTTCCTCCTCAGTCACAGTTACAGGGTGGCCTCGGGCTGGACAGGAGACGGCCATAAACGCTACTTCTaGAATCTCTCCCTTGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: PFLLSHSYRVASGWTGDGHKRYF*NLSLGL Trigger: AAGGCCAAGGGAGAGATTCCAGAAGTAGCGTTTATG...GCCGTCTCCTGTCCAGCCCGAGGCCACCCTGTAACTGTGACTGAGGAGGAAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010241.14 ENSMUST00000184826.2 |
||
| CDS-3UTR CCA 90 bp | GCAGCCCTTCCTCCTCAGTCACAGTTACAGGGTGGCCTCGGGCTGGACAGGAGAATGGCGAAGGCTCTTTaGATTTCTTCAGGGCCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: AALPPQSQLQGGLGLDRRMAKAL*ISSGPE Trigger: TTCAGGCCCTGAAGAAATCCAAAGAGCCTTCGCCAT...TCTCCTGTCCAGCCCGAGGCCACCCTGTAACTGTGACTGAGGAGGAAGGGCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184826.2 |
||
| CDS-3UTR TCA 90 bp | AGCCCTTCCTCCTCAGTCACAGTTACAGGGTGGCCTCGGGCTGGACAGGAGACGCCTGGATCTTATGGTTaGCACCCTTTAATGCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SPSSSVTVTGWPRAGQETPGSYG*HPLMQK Trigger: CTTCTGCATTAAAGGGTGTCAACCATAAGATCCAGG...CGTCTCCTGTCCAGCCCGAGGCCACCCTGTAACTGTGACTGAGGAGGAAGGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010241.14 ENSMUST00000184970.9 |
||
| CDS-3UTR TCA 90 bp | AGCAGCCCTTCCTCCTCAGTCACAGTTACAGGGTGGCCTCGGGCTGGACAGGAGGCAGAAAGGAATACATaGTCCTCCTCCCAAAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: SSPSSSVTVTGWPRAGQEAERNT*SSSQRT Trigger: TGTTCTTTGGGAGGAGGATCATGTATTCCTTTCTGC...CTCCTGTCCAGCCCGAGGCCACCCTGTAACTGTGACTGAGGAGGAAGGGCTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184970.9 |
||
| CDS-3UTR CCA 90 bp | GAGGATGAAGCAGCCCTTCCTCCTCAGTCACAGTTACAGGGTGGCCTCGGGCTGACAACATCGATGTTCTaGGCCACCAAATCTGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: EDEAALPPQSQLQGGLGLTTSMF*ATKSGS Trigger: AGACCCAGATTTGGTGGCCCAGAACATCGATGTTGT...CAGCCCGAGGCCACCCTGTAACTGTGACTGAGGAGGAAGGGCTGCTTCATCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010241.14 ENSMUST00000184970.9 |
||
| 3UTR CAA 72 bp | GGAGGGGGTAGCTCATGGCCATCCAGGCGTAATAACTaGGGAAATCGTTCGCGAATGGCGCTGTCAAGAACG | + |
|
Preference number: 4 (lower is better) Translates to: GGGSSWPSRRNN*GNRSRMALSRT Trigger: CGTTCTTGACAGCGCCATTCGCGAACGATTTCCCAAGTTATTACGCCTGGATGGCCATGAGCTACCCCCTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000184970.9 |
||
| CDS-3UTR GCA 90 bp | GCAGCCCTTCCTCCTCAGTCACAGTTACAGGGTGGCCTCGGGCTGGACAGGAGAAGACTGGGTAGAAAATaGTTGCAACATTTCCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: AALPPQSQLQGGLGLDRRRLGRK*LQHFLL Trigger: CAGCAGGAAATGTTGCAAGCATTTTCTACCCAGTCT...TCTCCTGTCCAGCCCGAGGCCACCCTGTAACTGTGACTGAGGAGGAAGGGCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010241.14 ENSMUST00000184826.2 |
||
| CDS-3UTR CCA 90 bp | GAAGCAGCCCTTCCTCCTCAGTCACAGTTACAGGGTGGCCTCGGGCTGGACAGGAGGTCAAGTGCTTGTTaGTTGCCATCATATCGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: EAALPPQSQLQGGLGLDRRSSAC*LPSYRL Trigger: CAAACGATATGATGGCAACCAACAAGCACTTGACCT...CCTGTCCAGCCCGAGGCCACCCTGTAACTGTGACTGAGGAGGAAGGGCTGCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010241.14 ENSMUST00000184970.9 |
||
| CDS-3UTR CCA 90 bp | TTCCAGAAGGTAGGTGAGGAGGATGAAGCAGCCCTTCCTCCTCAGTCACAGTTAGACTGGAGGAAGGTGTaGGTGCAGACATGGCGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: FQKVGEEDEAALPPQSQLDWRKV*VQTWRR Trigger: CCTTCGCCATGTCTGCACCCACACCTTCCTCCAGTC...TAACTGTGACTGAGGAGGAAGGGCTGCTTCATCCTCCTCACCTACCTTCTGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010241.14 ENSMUST00000184826.2 |
||
| CDS-3UTR TCA 90 bp | GGACAGGAGACGGCAGATGACAGCCAGACAATATTATCCAGGGGCTATTTACAATTGGTGGTCCCATCTTaGCTGGTGCCAGCCCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GQETADDSQTILSRGYLQLVVPS*LVPAPP Trigger: AGGAGGGGCTGGCACCAGTCAAGATGGGACCACCAA...TTGTAAATAGCCCCTGGATAATATTGTCTGGCTGTCATCTGCCGTCTCCTGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010241.14 ENSMUST00000184970.9 |
||
| CDS-3UTR TCA 90 bp | CCTGGGGTTAAGTACACAGAGCACCTAAGTCCTTCGGGTAGTTTAGTGTCAGCTCTGAGCGGAGCCCCTTaGGGTCAAGTGCTTGTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PGVKYTEHLSPSGSLVSALSGAP*GQVLVG Trigger: ACCAACAAGCACTTGACCTCAAGGGGCTCCGCTCAG...AGCTGACACTAAACTACCCGAAGGACTTAGGTGCTCTGTGTACTTAACCCCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010241.14 ENSMUST00000184970.9 |
||
| CDS-3UTR GCA 90 bp | AGGAGGATGAAGCAGCCCTTCCTCCTCAGTCACAGTTACAGGGTGGCCTCGGGCCAAGTGCTTGTTGGTTaGCATCATATCGTTTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RRMKQPFLLSHSYRVASGQVLVG*HHIVCS Trigger: TGAGCAAACGATATGATGGCAACCAACAAGCACTTG...GCCCGAGGCCACCCTGTAACTGTGACTGAGGAGGAAGGGCTGCTTCATCCTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010241.14 ENSMUST00000184970.9 |
||
| CDS-3UTR GCA 90 bp | AGCGTGGGTACTGGACTGGAGGAAGGTGTGGGTGCAGACATGGCGAAGGCTCTTCTGCCATACAGCTTCTaGGGTTTAGAACAACATCGA | + |
|
Preference number: 4 (lower is better) Translates to: SVGTGLEEGVGADMAKALLPYSF*GLEQHR Trigger: TCGATGTTGTTCTAAACCGCAGAAGCTGTATGGCAG...AAGAGCCTTCGCCATGTCTGCACCCACACCTTCCTCCAGTCCAGTACCCACGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184970.9 |
||
| CDS-3UTR GCA 90 bp | CAGGAGACGGCAGATGACAGCCAGACAATATTATCCAGGGGCTATTTACAAGGGGATCCGCAGGGTGGCTaGCATACAGCTTCTGCGGTT | + |
|
Preference number: 4 (lower is better) Translates to: QETADDSQTILSRGYLQGDPQGG*HTASAV Trigger: AACCGCAGAAGCTGTATGGCAGCCACCCTGCGGATC...CCCTTGTAAATAGCCCCTGGATAATATTGTCTGGCTGTCATCTGCCGTCTCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010241.14 ENSMUST00000184970.9 |
||
| CDS-3UTR CCA 90 bp | TTAGGGAAACCCAGATTTCTTCTCCAGGAAAGGCCCAGTTCACAGCACTGGGCACTCCCAAAGAACAGGTaGTTCCAGCTCAGGGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LGKPRFLLQERPSSQHWALPKNR*FQLRAA Trigger: TGCAGCCCTGAGCTGGAACCACCTGTTCTTTGGGAG...TGCCCAGTGCTGTGAACTGGGCCTTTCCTGGAGAAGAAATCTGGGTTTCCCTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184970.9 |
||
| CDS-3UTR TCA 90 bp | TCATGGCCATCCAGGCGTAATAACTTGGGAAATCGTTCGCGAATGGCGCTGTCAGAATGTTCTCTTCAATaGTCCGCAGGGTGGCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SWPSRRNNLGNRSRMALSECSLQ*SAGWLP Trigger: TGGCAGCCACCCTGCGGATCATTGAAGAGAACATTC...TGACAGCGCCATTCGCGAACGATTTCCCAAGTTATTACGCCTGGATGGCCATGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184970.9 |
||
| CDS-3UTR GCA 90 bp | CGGCAGATGACAGCCAGACAATATTATCCAGGGGCTATTTACAAGGGGACTTTTAGCCCCTCCTCTCTCTaGAGGAGCTCTGTCTCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: RQMTARQYYPGAIYKGTFSPSSL*RSSVSP Trigger: CGGAGAGACAGAGCTCCTGCAGAGAGAGGAGGGGCT...AAAAGTCCCCTTGTAAATAGCCCCTGGATAATATTGTCTGGCTGTCATCTGCCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000010241.14 ENSMUST00000184970.9 |
||
| CDS-3UTR GCA 90 bp | GCAGCCCTTCCTCCTCAGTCACAGTTACAGGGTGGCCTCGGGCTGGACAGGAGATGTATAGCCTGTTGCTaGTCAAGTTCAAAGACAATA | + |
|
Preference number: 4 (lower is better) Translates to: AALPPQSQLQGGLGLDRRCIACC*SSSKTI Trigger: TATTGTCTTTGAACTTGAGCAGCAACAGGCTATACA...TCTCCTGTCCAGCCCGAGGCCACCCTGTAACTGTGACTGAGGAGGAAGGGCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010241.14 ENSMUST00000184970.9 |
||
| CDS-3UTR GCA 90 bp | AAAAACCCGAGGAACAGCCCATCCCATCCTGCTTATCGCCCACTCCTCCCCAACAGGTTTGGCGCCTTCTaGACAATGCTAGACATATCA | + |
|
Preference number: 4 (lower is better) Translates to: KNPRNSPSHPAYRPLLPNRFGAF*TMLDIS Trigger: TGATATGTCTAGCATTGTGCAGAAGGCGCCAAACCT...GTTGGGGAGGAGTGGGCGATAAGCAGGATGGGATGGGCTGTTCCTCGGGTTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000184970.9 |
||
| CDS-3UTR CCA 90 bp | AGGAGACGGCAGATGACAGCCAGACAATATTATCCAGGGGCTATTTACAAGGGGGGAGGGGGTAGCTCATaGCCATCCAGGCGTAATAAC | + |
|
Preference number: 4 (lower is better) Translates to: RRRQMTARQYYPGAIYKGGGGSS*PSRRNN Trigger: GTTATTACGCCTGGATGGCCATGAGCTACCCCCTCC...CCCCTTGTAAATAGCCCCTGGATAATATTGTCTGGCTGTCATCTGCCGTCTCCT 52% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000010241.14 |
||
| CDS-3UTR CCA 90 bp | GCTGGACAGGAGACGGCAGATGACAGCCAGACAATATTATCCAGGGGCTATTTAGTTCTGGGGAAAGCGTaGGTACTGGACTGGAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: AGQETADDSQTILSRGYLVLGKA*VLDWRK Trigger: CTTCCTCCAGTCCAGTACCCACGCTTTCCCCAGAAC...TAAATAGCCCCTGGATAATATTGTCTGGCTGTCATCTGCCGTCTCCTGTCCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010241.14 ENSMUST00000184826.2 |
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| CDS-3UTR CCA 90 bp | AGGAGACGGCAGATGACAGCCAGACAATATTATCCAGGGGCTATTTACAAGGGGGTTCTGGGGAAAGCGTaGGTACTGGACTGGAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RRRQMTARQYYPGAIYKGVLGKA*VLDWRK Trigger: CTTCCTCCAGTCCAGTACCCACGCTTTCCCCAGAAC...CCCCTTGTAAATAGCCCCTGGATAATATTGTCTGGCTGTCATCTGCCGTCTCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000010241.14 ENSMUST00000184826.2 |
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| CDS-3UTR TCA 90 bp | TGGCTTCCTGGCACCATGAGGCTCAATCTTCCGGAAGTCTTCTCTAAGTCTTCCGAAACTCGATGGGATTaGAGGGGACACTGCATTTGC | + |
|
Preference number: 4 (lower is better) Translates to: WLPGTMRLNLPEVFSKSSETRWD*RGHCIC Trigger: GCAAATGCAGTGTCCCCTTCAATCCCATCGAGTTTC...GGAAGACTTAGAGAAGACTTCCGGAAGATTGAGCCTCATGGTGCCAGGAAGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010241.14 ENSMUST00000184970.9 |
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| CDS-3UTR TCA 90 bp | TTCCAGAAGGTAGGTGAGGAGGATGAAGCAGCCCTTCCTCCTCAGTCACAGTTAGACAGAGGCTACAACTaGCCTGATATAGCTGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: FQKVGEEDEAALPPQSQLDRGYN*PDIAGL Trigger: CAGTCCAGCTATATCAGGTCAGTTGTAGCCTCTGTC...TAACTGTGACTGAGGAGGAAGGGCTGCTTCATCCTCCTCACCTACCTTCTGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184970.9 |
||
| CDS-3UTR GCA 90 bp | TGCCAGGTCTGGCCTTCGCCAAGACCAGAACACACCACAAGTATGGCACAGGATAGGGGACACTGCATTTaGTCTGAATCATGCTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: CQVWPSPRPEHTTSMAQDRGHCI*SESCSE Trigger: TTCTGAGCATGATTCAGAGCAAATGCAGTGTCCCCT...ATCCTGTGCCATACTTGTGGTGTGTTCTGGTCTTGGCGAAGGCCAGACCTGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184970.9 |
||
| CDS-3UTR GCA 90 bp | TTCCAGAAGGTAGGTGAGGAGGATGAAGCAGCCCTTCCTCCTCAGTCACAGTTAGCTTGCAACATTTCCTaGTGTTCTGGGGAAAGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: FQKVGEEDEAALPPQSQLACNIS*CSGESV Trigger: CACGCTTTCCCCAGAACAGCAGGAAATGTTGCAAGC...TAACTGTGACTGAGGAGGAAGGGCTGCTTCATCCTCCTCACCTACCTTCTGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010241.14 ENSMUST00000184826.2 |
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| CDS-3UTR CCA 90 bp | TGGCTTCCTGGCACCATGAGGCTCAATCTTCCGGAAGTCTTCTCTAAGTCTTCCATGGCGAAGGCTCTTTaGATTTCTTCAGGGCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: WLPGTMRLNLPEVFSKSSMAKAL*ISSGLA Trigger: TGCCAGCCCTGAAGAAATCCAAAGAGCCTTCGCCAT...GGAAGACTTAGAGAAGACTTCCGGAAGATTGAGCCTCATGGTGCCAGGAAGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010241.14 |
||
| CDS-3UTR CCA 90 bp | CAGGAGACGGCAGATGACAGCCAGACAATATTATCCAGGGGCTATTTACAAGGGCATTTCCTGCTGTTCTaGGGAAAGCGTGGGTACTGG | + |
|
Preference number: 4 (lower is better) Translates to: QETADDSQTILSRGYLQGHFLLF*GKRGYW Trigger: CCAGTACCCACGCTTTCCCCAGAACAGCAGGAAATG...CCCTTGTAAATAGCCCCTGGATAATATTGTCTGGCTGTCATCTGCCGTCTCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010241.14 ENSMUST00000184826.2 |
||
| 3UTR CAA 72 bp | CAAGACCAGAACACACCACAAGTATGGCACAGGATGTaGGGGCAAGGAGATGAACAAGACAGGGCTCAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: QDQNTPQVWHRM*GQGDEQDRAQG Trigger: TCCTTGAGCCCTGTCTTGTTCATCTCCTTGCCCCAACATCCTGTGCCATACTTGTGGTGTGTTCTGGTCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184970.9 |
||
| CDS-3UTR GCA 90 bp | GCTGGACAGGAGACGGCAGATGACAGCCAGACAATATTATCCAGGGGCTATTTAATTCGATCTCGATCATaGCAACCATCTCCCCGACGA | + |
|
Preference number: 4 (lower is better) Translates to: AGQETADDSQTILSRGYLIRSRS*QPSPRR Trigger: TCGTCGGGGAGATGGTTGGCATGATCGAGATCGAAT...TAAATAGCCCCTGGATAATATTGTCTGGCTGTCATCTGCCGTCTCCTGTCCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010241.14 ENSMUST00000184970.9 |
||
| CDS-3UTR TCA 90 bp | TGGCTTCCTGGCACCATGAGGCTCAATCTTCCGGAAGTCTTCTCTAAGTCTTCCCCTGGATCTTATGGTTaGCACCCTTTAATGCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: WLPGTMRLNLPEVFSKSSPGSYG*HPLMQK Trigger: CTTCTGCATTAAAGGGTGTCAACCATAAGATCCAGG...GGAAGACTTAGAGAAGACTTCCGGAAGATTGAGCCTCATGGTGCCAGGAAGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010241.14 ENSMUST00000184970.9 |
||
| CDS-3UTR TCA 90 bp | ACGGCAGATGACAGCCAGACAATATTATCCAGGGGCTATTTACAAGGGGACTTTGAATGTTCTCTTCAATaGTCCGCAGGGTGGCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TADDSQTILSRGYLQGDFECSLQ*SAGWLP Trigger: TGGCAGCCACCCTGCGGATCATTGAAGAGAACATTC...AAAGTCCCCTTGTAAATAGCCCCTGGATAATATTGTCTGGCTGTCATCTGCCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010241.14 ENSMUST00000184970.9 |
||
| CDS-3UTR GCA 90 bp | TTCCAGAAGGTAGGTGAGGAGGATGAAGCAGCCCTTCCTCCTCAGTCACAGTTAAGGTTTGGCGCCTTCTaGACAATGCTAGACATATCA | + |
|
Preference number: 4 (lower is better) Translates to: FQKVGEEDEAALPPQSQLRFGAF*TMLDIS Trigger: TGATATGTCTAGCATTGTGCAGAAGGCGCCAAACCT...TAACTGTGACTGAGGAGGAAGGGCTGCTTCATCCTCCTCACCTACCTTCTGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010241.14 ENSMUST00000184970.9 |
||
| CDS-3UTR CCA 90 bp | AGGAGACGGCAGATGACAGCCAGACAATATTATCCAGGGGCTATTTACAAGGGGCGAAGTTGTCACACATaGGGTTTCTGTCAAGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: RRRQMTARQYYPGAIYKGRSCHT*GFCQAT Trigger: TGTGGCTTGACAGAAACCCCATGTGTGACAACTTCG...CCCCTTGTAAATAGCCCCTGGATAATATTGTCTGGCTGTCATCTGCCGTCTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010241.14 ENSMUST00000184970.9 |
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| CDS-3UTR GCA 90 bp | CCTGGGGTTAAGTACACAGAGCACCTAAGTCCTTCGGGTAGTTTAGTGTCAGCTCTGCCATACAGCTTCTaGGGTTTAGAACAACATCGA | + |
|
Preference number: 4 (lower is better) Translates to: PGVKYTEHLSPSGSLVSALPYSF*GLEQHR Trigger: TCGATGTTGTTCTAAACCGCAGAAGCTGTATGGCAG...AGCTGACACTAAACTACCCGAAGGACTTAGGTGCTCTGTGTACTTAACCCCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010241.14 ENSMUST00000184970.9 |
||
| CDS-3UTR GCA 90 bp | CGGCAGATGACAGCCAGACAATATTATCCAGGGGCTATTTACAAGGGGACTTTTGCTTGCAACATTTCCTaGTGTTCTGGGGAAAGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: RQMTARQYYPGAIYKGTFACNIS*CSGESV Trigger: CACGCTTTCCCCAGAACAGCAGGAAATGTTGCAAGC...AAAAGTCCCCTTGTAAATAGCCCCTGGATAATATTGTCTGGCTGTCATCTGCCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000010241.14 ENSMUST00000184826.2 |
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| CDS-3UTR CCA 90 bp | TGGCTTCCTGGCACCATGAGGCTCAATCTTCCGGAAGTCTTCTCTAAGTCTTCCCGATCCTGGATCTTATaGTTGACACCCTTTAATGCA | + |
|
Preference number: 4 (lower is better) Translates to: WLPGTMRLNLPEVFSKSSRSWIL*LTPFNA Trigger: TGCATTAAAGGGTGTCAACCATAAGATCCAGGATCG...GGAAGACTTAGAGAAGACTTCCGGAAGATTGAGCCTCATGGTGCCAGGAAGCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010241.14 ENSMUST00000184970.9 |
||
| CDS-3UTR CCA 90 bp | AGGAGACGGCAGATGACAGCCAGACAATATTATCCAGGGGCTATTTACAAGGGGAGGTTCATGCCAGACTaGGTAGAAAATGCTTGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: RRRQMTARQYYPGAIYKGRFMPD*VENACN Trigger: GTTGCAAGCATTTTCTACCCAGTCTGGCATGAACCT...CCCCTTGTAAATAGCCCCTGGATAATATTGTCTGGCTGTCATCTGCCGTCTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000010241.14 ENSMUST00000184826.2 |
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| CDS-3UTR CCA 90 bp | GCTGGACAGGAGACGGCAGATGACAGCCAGACAATATTATCCAGGGGCTATTTACATAAACGCTACTTCTaGAATCTCTCCCTTGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: AGQETADDSQTILSRGYLHKRYF*NLSLGL Trigger: AAGGCCAAGGGAGAGATTCCAGAAGTAGCGTTTATG...TAAATAGCCCCTGGATAATATTGTCTGGCTGTCATCTGCCGTCTCCTGTCCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010241.14 ENSMUST00000184826.2 |
||
| CDS-3UTR CCA 90 bp | TTAGGGAAACCCAGATTTCTTCTCCAGGAAAGGCCCAGTTCACAGCACTGGGCAAAGAAAGAAGAGATCTaGGACAGAGCTAGGAGACAA | + |
|
Preference number: 4 (lower is better) Translates to: LGKPRFLLQERPSSQHWAKKEEI*DRARRQ Trigger: TTGTCTCCTAGCTCTGTCCCAGATCTCTTCTTTCTT...TGCCCAGTGCTGTGAACTGGGCCTTTCCTGGAGAAGAAATCTGGGTTTCCCTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184970.9 |
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| CDS-3UTR TCA 90 bp | AGGAGACGGCAGATGACAGCCAGACAATATTATCCAGGGGCTATTTACAAGGGGGCGTTAACGTCATGTTaGGTTTTGGGTAACTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: RRRQMTARQYYPGAIYKGALTSC*VLGNSL Trigger: CAATGAGTTACCCAAAACTCAACATGACGTTAACGC...CCCCTTGTAAATAGCCCCTGGATAATATTGTCTGGCTGTCATCTGCCGTCTCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000010241.14 |
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| CDS-3UTR GCA 90 bp | GGACAGGAGACGGCAGATGACAGCCAGACAATATTATCCAGGGGCTATTTACAACTGGGGATCATTCATTaGTACATCGCCATCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GQETADDSQTILSRGYLQLGIIH*YIAIIF Trigger: GAAGATGATGGCGATGTAGCAATGAATGATCCCCAG...TTGTAAATAGCCCCTGGATAATATTGTCTGGCTGTCATCTGCCGTCTCCTGTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010241.14 ENSMUST00000184970.9 |
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| CDS-3UTR GCA 90 bp | GTTAAGTACACAGAGCACCTAAGTCCTTCGGGTAGTTTAGTGTCAGCTCTACAAATTCGATCTCGATCATaGCAACCATCTCCCCGACGA | + |
|
Preference number: 4 (lower is better) Translates to: VKYTEHLSPSGSLVSALQIRSRS*QPSPRR Trigger: TCGTCGGGGAGATGGTTGGCATGATCGAGATCGAAT...TTGTAGAGCTGACACTAAACTACCCGAAGGACTTAGGTGCTCTGTGTACTTAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010241.14 ENSMUST00000184970.9 |
||
| CDS-3UTR GCA 90 bp | TGGCTTCCTGGCACCATGAGGCTCAATCTTCCGGAAGTCTTCTCTAAGTCTTCCATTTGCTCTGAATCATaGTCAGAAGCCACGTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: WLPGTMRLNLPEVFSKSSICSES*SEATFC Trigger: ACAAAACGTGGCTTCTGAGCATGATTCAGAGCAAAT...GGAAGACTTAGAGAAGACTTCCGGAAGATTGAGCCTCATGGTGCCAGGAAGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010241.14 ENSMUST00000184970.9 |
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| CDS-3UTR CCA 90 bp | AGGAGACGGCAGATGACAGCCAGACAATATTATCCAGGGGCTATTTACAAGGGGCGATCCTGGATCTTATaGTTGACACCCTTTAATGCA | + |
|
Preference number: 4 (lower is better) Translates to: RRRQMTARQYYPGAIYKGRSWIL*LTPFNA Trigger: TGCATTAAAGGGTGTCAACCATAAGATCCAGGATCG...CCCCTTGTAAATAGCCCCTGGATAATATTGTCTGGCTGTCATCTGCCGTCTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010241.14 ENSMUST00000184970.9 |
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| CDS-3UTR CCA 90 bp | CAGGAGACGGCAGATGACAGCCAGACAATATTATCCAGGGGCTATTTACAAGGGAGGTCAAGTGCTTGTTaGTTGCCATCATATCGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: QETADDSQTILSRGYLQGRSSAC*LPSYRL Trigger: CAAACGATATGATGGCAACCAACAAGCACTTGACCT...CCCTTGTAAATAGCCCCTGGATAATATTGTCTGGCTGTCATCTGCCGTCTCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010241.14 ENSMUST00000184970.9 |
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| CDS-3UTR CCA 90 bp | AGGAGACGGCAGATGACAGCCAGACAATATTATCCAGGGGCTATTTACAAGGGGGGATTTCTTCAGGGCTaGCATTCCGCACAAATAATT | + |
|
Preference number: 4 (lower is better) Translates to: RRRQMTARQYYPGAIYKGGFLQG*HSAQII Trigger: AATTATTTGTGCGGAATGCCAGCCCTGAAGAAATCC...CCCCTTGTAAATAGCCCCTGGATAATATTGTCTGGCTGTCATCTGCCGTCTCCT 47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000010241.14 |
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| CDS-3UTR GCA 90 bp | AGGAGCTCTGTCTCTCCGTACAGTAATATGAATTCGATCTCGATCATGCCAACCCTGGGGATCATTCATTaGTACATCGCCATCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RSSVSPYSNMNSISIMPTLGIIH*YIAIIF Trigger: GAAGATGATGGCGATGTAGCAATGAATGATCCCCAG...GGTTGGCATGATCGAGATCGAATTCATATTACTGTACGGAGAGACAGAGCTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184756.2 |
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| CDS-3UTR GCA 90 bp | CGGCAGATGACAGCCAGACAATATTATCCAGGGGCTATTTACAAGGGGACTTTTCTGGGGATCATTCATTaGTACATCGCCATCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RQMTARQYYPGAIYKGTFLGIIH*YIAIIF Trigger: GAAGATGATGGCGATGTAGCAATGAATGATCCCCAG...AAAAGTCCCCTTGTAAATAGCCCCTGGATAATATTGTCTGGCTGTCATCTGCCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000010241.14 ENSMUST00000184970.9 |
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| CDS-3UTR GCA 90 bp | GCTGGACAGGAGACGGCAGATGACAGCCAGACAATATTATCCAGGGGCTATTTAATTTGCTCTGAATCATaGTCAGAAGCCACGTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: AGQETADDSQTILSRGYLICSES*SEATFC Trigger: ACAAAACGTGGCTTCTGAGCATGATTCAGAGCAAAT...TAAATAGCCCCTGGATAATATTGTCTGGCTGTCATCTGCCGTCTCCTGTCCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010241.14 ENSMUST00000184970.9 |
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| CDS-3UTR CCA 90 bp | ACGGCAGATGACAGCCAGACAATATTATCCAGGGGCTATTTACAAGGGGACTTTAGGTTCATGCCAGACTaGGTAGAAAATGCTTGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: TADDSQTILSRGYLQGDFRFMPD*VENACN Trigger: GTTGCAAGCATTTTCTACCCAGTCTGGCATGAACCT...AAAGTCCCCTTGTAAATAGCCCCTGGATAATATTGTCTGGCTGTCATCTGCCGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000010241.14 ENSMUST00000184826.2 |
||
| CDS-3UTR TCA 90 bp | ACGGCAGATGACAGCCAGACAATATTATCCAGGGGCTATTTACAAGGGGACTTTCTCCGTACAGTAATATaGATTCGATCTCGATCATGC | + |
|
Preference number: 4 (lower is better) Translates to: TADDSQTILSRGYLQGDFLRTVI*IRSRSC Trigger: GCATGATCGAGATCGAATTCATATTACTGTACGGAG...AAAGTCCCCTTGTAAATAGCCCCTGGATAATATTGTCTGGCTGTCATCTGCCGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010241.14 ENSMUST00000184970.9 |
||
| CDS-3UTR GCA 90 bp | CGGCAGATGACAGCCAGACAATATTATCCAGGGGCTATTTACAAGGGGACTTTTCAAGTGCTTGTTGGTTaGCATCATATCGTTTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RQMTARQYYPGAIYKGTFQVLVG*HHIVCS Trigger: TGAGCAAACGATATGATGGCAACCAACAAGCACTTG...AAAAGTCCCCTTGTAAATAGCCCCTGGATAATATTGTCTGGCTGTCATCTGCCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000010241.14 ENSMUST00000184970.9 |
||
| CDS-3UTR GCA 90 bp | CGGCAGATGACAGCCAGACAATATTATCCAGGGGCTATTTACAAGGGGACTTTTAGACTGGGTAGAAAATaGTTGCAACATTTCCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RQMTARQYYPGAIYKGTFRLGRK*LQHFLL Trigger: CAGCAGGAAATGTTGCAAGCATTTTCTACCCAGTCT...AAAAGTCCCCTTGTAAATAGCCCCTGGATAATATTGTCTGGCTGTCATCTGCCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000010241.14 ENSMUST00000184826.2 |
||
| CDS-3UTR TCA 90 bp | GTTAAGTACACAGAGCACCTAAGTCCTTCGGGTAGTTTAGTGTCAGCTCTACAACTCCGTACAGTAATATaGATTCGATCTCGATCATGC | + |
|
Preference number: 4 (lower is better) Translates to: VKYTEHLSPSGSLVSALQLRTVI*IRSRSC Trigger: GCATGATCGAGATCGAATTCATATTACTGTACGGAG...TTGTAGAGCTGACACTAAACTACCCGAAGGACTTAGGTGCTCTGTGTACTTAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010241.14 ENSMUST00000184970.9 |
||
| CDS-3UTR GCA 90 bp | CGGCAGATGACAGCCAGACAATATTATCCAGGGGCTATTTACAAGGGGACTTTTTGTATAGCCTGTTGCTaGTCAAGTTCAAAGACAATA | + |
|
Preference number: 4 (lower is better) Translates to: RQMTARQYYPGAIYKGTFCIACC*SSSKTI Trigger: TATTGTCTTTGAACTTGAGCAGCAACAGGCTATACA...AAAAGTCCCCTTGTAAATAGCCCCTGGATAATATTGTCTGGCTGTCATCTGCCG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000010241.14 ENSMUST00000184970.9 |
||
| CDS-3UTR CAA 90 bp | AAGCAGCCCTTCCTCCTCAGTCACAGTTACAGGGTGGCCTCGGGCTGGACAGGATCTGAGCGGAGCCCCTaGAGGTCAAGTGCTTGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: KQPFLLSHSYRVASGWTGSERSP*RSSACW Trigger: CCAACAAGCACTTGACCTCAAGGGGCTCCGCTCAGA...TCCTGTCCAGCCCGAGGCCACCCTGTAACTGTGACTGAGGAGGAAGGGCTGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010241.14 ENSMUST00000184970.9 |
||
| CDS-3UTR CAA 90 bp | GCAGCCCTTCCTCCTCAGTCACAGTTACAGGGTGGCCTCGGGCTGGACAGGAGACATGGCGAAGGCTCTTaGGATTTCTTCAGGGCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: AALPPQSQLQGGLGLDRRHGEGS*DFFRAG Trigger: GCCAGCCCTGAAGAAATCCAAAGAGCCTTCGCCATG...TCTCCTGTCCAGCCCGAGGCCACCCTGTAACTGTGACTGAGGAGGAAGGGCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010241.14 |
||
| CDS-3UTR CAA 90 bp | AGGGGCACCCCCTTCTTAATTGCCTTGAAGGCTGGCTCTGTTGTCTTGCTGCCTCTTGGTGGTCCCATCTaGACTGGTGCCAGCCCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RGTPFLIALKAGSVVLLPLGGPI*TGASPS Trigger: GGAGGGGCTGGCACCAGTCAAGATGGGACCACCAAG...AGGCAGCAAGACAACAGAGCCAGCCTTCAAGGCAATTAAGAAGGGGGTGCCCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000184970.9 |
||
| CDS-3UTR CAA 90 bp | AGCAGCCCTTCCTCCTCAGTCACAGTTACAGGGTGGCCTCGGGCTGGACAGGAGCGACATCAAAGGAAATaGGAGGGGGTAGCTCATGGC | + |
|
Preference number: 5 (lower is better) Translates to: SSPSSSVTVTGWPRAGQERHQRK*EGVAHG Trigger: GCCATGAGCTACCCCCTCCAATTTCCTTTGATGTCG...CTCCTGTCCAGCCCGAGGCCACCCTGTAACTGTGACTGAGGAGGAAGGGCTGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010241.14 |
||
| CDS CCA 90 bp | CCTGCTGTTCTGGGGAAAGCGTGGGTACTGGACTGGAGGAAGGTGTaGGTGCAGACATGGCGAAGGCTCTTTGGATTTCTTCAGGGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: PAVLGKAWVLDWRKV*VQTWRRLFGFLQGL Trigger: CAGGCCCTGAAGAAATCCAAAGAGCCTTCGCCATGTCTGCACCCACACCTTCCTCCAGTCCAGTACCCACGCTTTCCCCAGAACAGCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184826.2 |
||
| CDS-3UTR CAA 90 bp | AGCAGCCCTTCCTCCTCAGTCACAGTTACAGGGTGGCCTCGGGCTGGACAGGAGTCTGGAATCTCTCCCTaGGCCTTGAGAAGAGTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SSPSSSVTVTGWPRAGQESGISP*ALRRVK Trigger: CTTCACTCTTCTCAAGGCCAAGGGAGAGATTCCAGA...CTCCTGTCCAGCCCGAGGCCACCCTGTAACTGTGACTGAGGAGGAAGGGCTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010241.14 ENSMUST00000184826.2 |
||
| CDS CCA 90 bp | GGGAAAGCGTGGGTACTGGACTGGAGGAAGGTGTGGGTGCAGACATaGCGAAGGCTCTTTGGATTTCTTCAGGGCCTGAATTGCTGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GKAWVLDWRKVWVQT*RRLFGFLQGLNCWQ Trigger: CTGCCAGCAATTCAGGCCCTGAAGAAATCCAAAGAGCCTTCGCCATGTCTGCACCCACACCTTCCTCCAGTCCAGTACCCACGCTTTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184826.2 |
||
| CDS-3UTR CAA 90 bp | GAAGCAGCCCTTCCTCCTCAGTCACAGTTACAGGGTGGCCTCGGGCTGGACAGGTCAAGTGCTTGTTGGTaGCCATCATATCGTTTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: EAALPPQSQLQGGLGLDRSSACW*PSYRLL Trigger: GAGCAAACGATATGATGGCAACCAACAAGCACTTGA...CCTGTCCAGCCCGAGGCCACCCTGTAACTGTGACTGAGGAGGAAGGGCTGCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010241.14 ENSMUST00000184970.9 |
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| CDS-3UTR CAA 90 bp | AGCCCTTCCTCCTCAGTCACAGTTACAGGGTGGCCTCGGGCTGGACAGGAGACGTTCAGCCCTTTTATCTaGTCTAATTCCCGCTCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: SPSSSVTVTGWPRAGQETFSPFI*SNSRSV Trigger: GACTGAGCGGGAATTAGACAAGATAAAAGGGCTGAA...CGTCTCCTGTCCAGCCCGAGGCCACCCTGTAACTGTGACTGAGGAGGAAGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010241.14 ENSMUST00000184970.9 |
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| CDS-3UTR CAA 90 bp | AGGAGGATGAAGCAGCCCTTCCTCCTCAGTCACAGTTACAGGGTGGCCTCGGGCTTGCCATCATATCGTTaGCTCATGATCAGCTTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: RRMKQPFLLSHSYRVASGLPSYR*LMISLS Trigger: GCTCAAGCTGATCATGAGCAAACGATATGATGGCAA...GCCCGAGGCCACCCTGTAACTGTGACTGAGGAGGAAGGGCTGCTTCATCCTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010241.14 ENSMUST00000184970.9 |
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| CDS-3UTR CAA 90 bp | GAGGATGAAGCAGCCCTTCCTCCTCAGTCACAGTTACAGGGTGGCCTCGGGCTGTCAAGTGCTTGTTGGTaGCCATCATATCGTTTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: EDEAALPPQSQLQGGLGLSSACW*PSYRLL Trigger: GAGCAAACGATATGATGGCAACCAACAAGCACTTGA...CAGCCCGAGGCCACCCTGTAACTGTGACTGAGGAGGAAGGGCTGCTTCATCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010241.14 ENSMUST00000184970.9 |
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| CDS-3UTR CAA 90 bp | GTTAAGTACACAGAGCACCTAAGTCCTTCGGGTAGTTTAGTGTCAGCTCTACAACTTGGTGGTCCCATCTaGACTGGTGCCAGCCCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VKYTEHLSPSGSLVSALQLGGPI*TGASPS Trigger: GGAGGGGCTGGCACCAGTCAAGATGGGACCACCAAG...TTGTAGAGCTGACACTAAACTACCCGAAGGACTTAGGTGCTCTGTGTACTTAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010241.14 ENSMUST00000184970.9 |
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| CDS-3UTR CAA 90 bp | AAAAACCCGAGGAACAGCCCATCCCATCCTGCTTATCGCCCACTCCTCCCCAACTTGCTCATGATCAGCTaGAGCTGCTCTATTTGTTCG | + |
|
Preference number: 5 (lower is better) Translates to: KNPRNSPSHPAYRPLLPNLLMIS*SCSICS Trigger: CGAACAAATAGAGCAGCTCAAGCTGATCATGAGCAA...GTTGGGGAGGAGTGGGCGATAAGCAGGATGGGATGGGCTGTTCCTCGGGTTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000184970.9 |
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| CDS-3UTR CAA 90 bp | TGGGTACTGGACTGGAGGAAGGTGTGGGTGCAGACATGGCGAAGGCTCTTTGGATTGCCATCATATCGTTaGCTCATGATCAGCTTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: WVLDWRKVWVQTWRRLFGLPSYR*LMISLS Trigger: GCTCAAGCTGATCATGAGCAAACGATATGATGGCAA...TCCAAAGAGCCTTCGCCATGTCTGCACCCACACCTTCCTCCAGTCCAGTACCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184970.9 |
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| CDS-3UTR CAA 90 bp | TTCCAGAAGGTAGGTGAGGAGGATGAAGCAGCCCTTCCTCCTCAGTCACAGTTATCTTCAGGGCCTGAATaGCTGGCAGGAACAGCAATG | + |
|
Preference number: 5 (lower is better) Translates to: FQKVGEEDEAALPPQSQLSSGPE*LAGTAM Trigger: CATTGCTGTTCCTGCCAGCAATTCAGGCCCTGAAGA...TAACTGTGACTGAGGAGGAAGGGCTGCTTCATCCTCCTCACCTACCTTCTGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184826.2 |
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| CDS CCA 90 bp | ACCAAATCTGGGTCTGAGCGGAGCCCCTTGAGGTCAAGTGCTTGTTaGTTGCCATCATATCGTTTGCTCATGATCAGCTTGAGCTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: TKSGSERSPLRSSAC*LPSYRLLMISLSCS Trigger: AGAGCAGCTCAAGCTGATCATGAGCAAACGATATGATGGCAACCAACAAGCACTTGACCTCAAGGGGCTCCGCTCAGACCCAGATTTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010241.14 ENSMUST00000183939.2 ENSMUST00000184970.9 |
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| CDS-3UTR CAA 90 bp | CGGCAGATGACAGCCAGACAATATTATCCAGGGGCTATTTACAAGGGGACTTTTTCTGAGCGGAGCCCCTaGAGGTCAAGTGCTTGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: RQMTARQYYPGAIYKGTFSERSP*RSSACW Trigger: CCAACAAGCACTTGACCTCAAGGGGCTCCGCTCAGA...AAAAGTCCCCTTGTAAATAGCCCCTGGATAATATTGTCTGGCTGTCATCTGCCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000010241.14 ENSMUST00000184970.9 |
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| CDS-3UTR CAA 90 bp | CAGTTCTGCCAGGTCTGGCCTTCGCCAAGACCAGAACACACCACAAGTATGGCATTCAGCCCTTTTATCTaGTCTAATTCCCGCTCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: QFCQVWPSPRPEHTTSMAFSPFI*SNSRSV Trigger: GACTGAGCGGGAATTAGACAAGATAAAAGGGCTGAA...TGCCATACTTGTGGTGTGTTCTGGTCTTGGCGAAGGCCAGACCTGGCAGAACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184970.9 |
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| CDS TCA 90 bp | TCACCACACTTCCATCGGAAAGGCCCCCGGCCTTTCTTTCTTCTTTaGGGGAAACTAACACGGTCATCATGCTCGTTGTATGACTTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: SPHFHRKGPRPFFLL*GKLTRSSCSLYDFP Trigger: AGGGAAGTCATACAACGAGCATGATGACCGTGTTAGTTTCCCTCAAAGAAGAAAGAAAGGCCGGGGGCCTTTCCGATGGAAGTGTGGTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000010241.14 ENSMUST00000184756.2 ENSMUST00000184970.9 |
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| CDS-3UTR CAA 90 bp | GCTGGACAGGAGACGGCAGATGACAGCCAGACAATATTATCCAGGGGCTATTTATCTGGAATCTCTCCCTaGGCCTTGAGAAGAGTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: AGQETADDSQTILSRGYLSGISP*ALRRVK Trigger: CTTCACTCTTCTCAAGGCCAAGGGAGAGATTCCAGA...TAAATAGCCCCTGGATAATATTGTCTGGCTGTCATCTGCCGTCTCCTGTCCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010241.14 ENSMUST00000184826.2 |
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| CDS GCA 90 bp | ATAGGGATTGTATCTTACTCGGGGGCCATCCTGGGGATCATTCATTaGTACATCGCCATCATCTTCCTCAAATCGGGAAGACTGTACACC | + |
|
Preference number: 5 (lower is better) Translates to: IGIVSYSGAILGIIH*YIAIIFLKSGRLYT Trigger: GGTGTACAGTCTTCCCGATTTGAGGAAGATGATGGCGATGTAGCAATGAATGATCCCCAGGATGGCCCCCGAGTAAGATACAATCCCTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000010241.14 ENSMUST00000184970.9 |
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| CDS-3UTR CAA 90 bp | GGCACCCCCTTCTTAATTGCCTTGAAGGCTGGCTCTGTTGTCTTGCTGCCTGATGGTGGAGCAGAAGCATaGATGATGATAGATATCCTT | + |
|
Preference number: 5 (lower is better) Translates to: GTPFLIALKAGSVVLLPDGGAEA*MMIDIL Trigger: AAGGATATCTATCATCATCAATGCTTCTGCTCCACC...ATCAGGCAGCAAGACAACAGAGCCAGCCTTCAAGGCAATTAAGAAGGGGGTGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000184970.9 |
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| CDS-3UTR CAA 90 bp | TGGCTTCCTGGCACCATGAGGCTCAATCTTCCGGAAGTCTTCTCTAAGTCTTCCCTTGAGCTGCTCTATTaGTTCGGGCTTCAGTTCATT | + |
|
Preference number: 5 (lower is better) Translates to: WLPGTMRLNLPEVFSKSSLELLY*FGLQFI Trigger: AATGAACTGAAGCCCGAACAAATAGAGCAGCTCAAG...GGAAGACTTAGAGAAGACTTCCGGAAGATTGAGCCTCATGGTGCCAGGAAGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010241.14 ENSMUST00000184970.9 |
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| CDS-3UTR CAA 90 bp | CAGGAGACGGCAGATGACAGCCAGACAATATTATCCAGGGGCTATTTACAAGGGTCCAGGCGTAATAACTaGGGAAATCGTTCGCGAATG | + |
|
Preference number: 5 (lower is better) Translates to: QETADDSQTILSRGYLQGSRRNN*GNRSRM Trigger: CATTCGCGAACGATTTCCCAAGTTATTACGCCTGGA...CCCTTGTAAATAGCCCCTGGATAATATTGTCTGGCTGTCATCTGCCGTCTCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010241.14 |
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| CDS-3UTR CAA 90 bp | GGACAGGAGACGGCAGATGACAGCCAGACAATATTATCCAGGGGCTATTTACAACTTGAGGTCAAGTGCTaGTTGGTTGCCATCATATCG | + |
|
Preference number: 5 (lower is better) Translates to: GQETADDSQTILSRGYLQLEVKC*LVAIIS Trigger: CGATATGATGGCAACCAACAAGCACTTGACCTCAAG...TTGTAAATAGCCCCTGGATAATATTGTCTGGCTGTCATCTGCCGTCTCCTGTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010241.14 ENSMUST00000184970.9 |
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| CDS-3UTR CAA 90 bp | GGACAGGAGACGGCAGATGACAGCCAGACAATATTATCCAGGGGCTATTTACAATTGCTCATGATCAGCTaGAGCTGCTCTATTTGTTCG | + |
|
Preference number: 5 (lower is better) Translates to: GQETADDSQTILSRGYLQLLMIS*SCSICS Trigger: CGAACAAATAGAGCAGCTCAAGCTGATCATGAGCAA...TTGTAAATAGCCCCTGGATAATATTGTCTGGCTGTCATCTGCCGTCTCCTGTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010241.14 ENSMUST00000184970.9 |
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| CDS-3UTR CAA 90 bp | GAGCACCTAAGTCCTTCGGGTAGTTTAGTGTCAGCTCTACAAAGTAAGCTTTGGCTTGAGGTCAAGTGCTaGTTGGTTGCCATCATATCG | + |
|
Preference number: 5 (lower is better) Translates to: EHLSPSGSLVSALQSKLWLEVKC*LVAIIS Trigger: CGATATGATGGCAACCAACAAGCACTTGACCTCAAG...CCAAAGCTTACTTTGTAGAGCTGACACTAAACTACCCGAAGGACTTAGGTGCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010241.14 ENSMUST00000184970.9 |
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| CDS-3UTR CAA 90 bp | AAAGGGAATCCTGGGGTTAAGTACACAGAGCACCTAAGTCCTTCGGGTAGTTTAATACATAGCCCTGAATaGCTGGCAGGAACAGCAATG | + |
|
Preference number: 5 (lower is better) Translates to: KGNPGVKYTEHLSPSGSLIHSPE*LAGTAM Trigger: CATTGCTGTTCCTGCCAGCAATTCAGGGCTATGTAT...TAAACTACCCGAAGGACTTAGGTGCTCTGTGTACTTAACCCCAGGATTCCCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010241.14 |
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| CDS GCA 90 bp | AATTCGTTTCCGGAGAGATTTAGGGTCTTTAGGTTTGGCGCCTTCTaGACAATGCTAGACATATCATCCAGCTTGTATAGCCTGTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: NSFPERFRVFRFGAF*TMLDISSSLYSLLL Trigger: CAGCAACAGGCTATACAAGCTGGATGATATGTCTAGCATTGTGCAGAAGGCGCCAAACCTAAAGACCCTAAATCTCTCCGGAAACGAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010241.14 ENSMUST00000183939.2 ENSMUST00000184970.9 |
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| CDS-3UTR CAA 90 bp | GGACAGGAGACGGCAGATGACAGCCAGACAATATTATCCAGGGGCTATTTACAAGTTTTGGGTAACTCATaGAGGAAGGCAACGACATTA | + |
|
Preference number: 5 (lower is better) Translates to: GQETADDSQTILSRGYLQVLGNS*RKATTL Trigger: TAATGTCGTTGCCTTCCTCAATGAGTTACCCAAAAC...TTGTAAATAGCCCCTGGATAATATTGTCTGGCTGTCATCTGCCGTCTCCTGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010241.14 |
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| CDS-3UTR CAA 90 bp | CGGCAGATGACAGCCAGACAATATTATCCAGGGGCTATTTACAAGGGGACTTTTGGTGGAGCAGAAGCATaGATGATGATAGATATCCTT | + |
|
Preference number: 5 (lower is better) Translates to: RQMTARQYYPGAIYKGTFGGAEA*MMIDIL Trigger: AAGGATATCTATCATCATCAATGCTTCTGCTCCACC...AAAAGTCCCCTTGTAAATAGCCCCTGGATAATATTGTCTGGCTGTCATCTGCCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000010241.14 ENSMUST00000184970.9 |
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| CDS CCA 90 bp | CTGCTCTATTTGTTCGGGCTTCAGTTCATTCTGTACAGTGTAGGGTaGAGCAGAAGCATTGATGATGATAGATATCCTTCTGTTTTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: LLYLFGLQFILYSVG*SRSIDDDRYPSVFS Trigger: CGAGAAAACAGAAGGATATCTATCATCATCAATGCTTCTGCTCCACCCTACACTGTACAGAATGAACTGAAGCCCGAACAAATAGAGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010241.14 ENSMUST00000183939.2 ENSMUST00000184970.9 |
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| CDS-3UTR CAA 90 bp | GTTAAGTACACAGAGCACCTAAGTCCTTCGGGTAGTTTAGTGTCAGCTCTACAAAACACAGTAATGTGCTaGTTTGGGCACTTATATCTA | + |
|
Preference number: 5 (lower is better) Translates to: VKYTEHLSPSGSLVSALQNTVMC*FGHLYL Trigger: TAGATATAAGTGCCCAAACAAGCACATTACTGTGTT...TTGTAGAGCTGACACTAAACTACCCGAAGGACTTAGGTGCTCTGTGTACTTAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010241.14 |
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| CDS TCA 72 bp | TCTGGGCCACCAAATCTGGGTCTGAGCGGAGCCCCTTaGGGTCAAGTGCTTGTTGGTTGCCATCATATCGTT | + |
|
Preference number: 6 (lower is better) Translates to: SGPPNLGLSGAP*GQVLVGCHHIV Trigger: AACGATATGATGGCAACCAACAAGCACTTGACCTCAAGGGGCTCCGCTCAGACCCAGATTTGGTGGCCCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010241.14 ENSMUST00000183939.2 ENSMUST00000184970.9 |
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| CDS CCA 72 bp | GAGGAAGGTGTGGGTGCAGACATGGCGAAGGCTCTTTaGATTTCTTCAGGGCCTGAATTGCTGGCAGGAACA | + |
|
Preference number: 6 (lower is better) Translates to: EEGVGADMAKAL*ISSGPELLAGT Trigger: TGTTCCTGCCAGCAATTCAGGCCCTGAAGAAATCCAAAGAGCCTTCGCCATGTCTGCACCCACACCTTCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184826.2 |
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| CDS CAA 72 bp | TTCTGGGCCACCAAATCTGGGTCTGAGCGGAGCCCCTaGAGGTCAAGTGCTTGTTGGTTGCCATCATATCGT | + |
|
Preference number: 6 (lower is better) Translates to: FWATKSGSERSP*RSSACWLPSYR Trigger: ACGATATGATGGCAACCAACAAGCACTTGACCTCAAGGGGCTCCGCTCAGACCCAGATTTGGTGGCCCAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010241.14 ENSMUST00000183939.2 ENSMUST00000184970.9 |
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| CDS CCA 72 bp | GGGTCTGAGCGGAGCCCCTTGAGGTCAAGTGCTTGTTaGTTGCCATCATATCGTTTGCTCATGATCAGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: GSERSPLRSSAC*LPSYRLLMISL Trigger: CAAGCTGATCATGAGCAAACGATATGATGGCAACCAACAAGCACTTGACCTCAAGGGGCTCCGCTCAGACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010241.14 ENSMUST00000183939.2 ENSMUST00000184970.9 |
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| CDS CCA 72 bp | ATACAGCTTCTGCGGTTTAGAACAACATCGATGTTCTaGGCCACCAAATCTGGGTCTGAGCGGAGCCCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: IQLLRFRTTSMF*ATKSGSERSPL Trigger: CAAGGGGCTCCGCTCAGACCCAGATTTGGTGGCCCAGAACATCGATGTTGTTCTAAACCGCAGAAGCTGTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010241.14 ENSMUST00000183939.2 ENSMUST00000184970.9 |
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| CDS CAA 90 bp | CCGGTTGGTATAGGGATTGTCGGGGGCCATCCTGGGGATCATTCATaGCTACATCGCCATCATCTTCCTCAAATCGGGAAGACTGTACAC | + |
|
Preference number: 6 (lower is better) Translates to: PVGIGIVGGHPGDHS*LHRHHLPQIGKTVH Trigger: GTGTACAGTCTTCCCGATTTGAGGAAGATGATGGCGATGTAGCAATGAATGATCCCCAGGATGGCCCCCGACAATCCCTATACCAACCGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000184756.2 |
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| CDS CAA 72 bp | TCTGAGCGGAGCCCCTTGAGGTCAAGTGCTTGTTGGTaGCCATCATATCGTTTGCTCATGATCAGCTTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: SERSPLRSSACW*PSYRLLMISLS Trigger: GCTCAAGCTGATCATGAGCAAACGATATGATGGCAACCAACAAGCACTTGACCTCAAGGGGCTCCGCTCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010241.14 ENSMUST00000183939.2 ENSMUST00000184970.9 |
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| CDS CAA 72 bp | ATAGGGATTGTCGGGGGCCATCCTGGGGATCATTCATaGCTACATCGCCATCATCTTCCTCAAATCGGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: IGIVGGHPGDHS*LHRHHLPQIGK Trigger: CTTCCCGATTTGAGGAAGATGATGGCGATGTAGCAATGAATGATCCCCAGGATGGCCCCCGACAATCCCTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000184756.2 |
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| CDS CAA 90 bp | CGGAGCCCCTTGAGGTCAAGTGCTTGTTGGTTGCCATCATATCGTTaGCTCATGATCAGCTTGAGCTGCTCTATTTGTTCGGGCTTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: RSPLRSSACWLPSYR*LMISLSCSICSGFS Trigger: ACTGAAGCCCGAACAAATAGAGCAGCTCAAGCTGATCATGAGCAAACGATATGATGGCAACCAACAAGCACTTGACCTCAAGGGGCTCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010241.14 ENSMUST00000183939.2 ENSMUST00000184970.9 |
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| CDS GCA 72 bp | GTATCTTACTCGGGGGCCATCCTGGGGATCATTCATTaGTACATCGCCATCATCTTCCTCAAATCGGGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: VSYSGAILGIIH*YIAIIFLKSGR Trigger: TCTTCCCGATTTGAGGAAGATGATGGCGATGTAGCAATGAATGATCCCCAGGATGGCCCCCGAGTAAGATAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000010241.14 ENSMUST00000184970.9 |
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| CDS CAA 72 bp | TGTATCTTACTCGGGGGCCATCCTGGGGATCATTCATaGCTACATCGCCATCATCTTCCTCAAATCGGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: CILLGGHPGDHS*LHRHHLPQIGK Trigger: CTTCCCGATTTGAGGAAGATGATGGCGATGTAGCAATGAATGATCCCCAGGATGGCCCCCGAGTAAGATACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000010241.14 ENSMUST00000184970.9 |
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| CDS CAA 90 bp | AAATCTGGGTCTGAGCGGAGCCCCTTGAGGTCAAGTGCTTGTTGGTaGCCATCATATCGTTTGCTCATGATCAGCTTGAGCTGCTCTATT | + |
|
Preference number: 6 (lower is better) Translates to: KSGSERSPLRSSACW*PSYRLLMISLSCSI Trigger: AATAGAGCAGCTCAAGCTGATCATGAGCAAACGATATGATGGCAACCAACAAGCACTTGACCTCAAGGGGCTCCGCTCAGACCCAGATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010241.14 ENSMUST00000183939.2 ENSMUST00000184970.9 |
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| CDS CAA 90 bp | TATAGGGATTGTATCTTACTCGGGGGCCATCCTGGGGATCATTCATaGCTACATCGCCATCATCTTCCTCAAATCGGGAAGACTGTACAC | + |
|
Preference number: 6 (lower is better) Translates to: YRDCILLGGHPGDHS*LHRHHLPQIGKTVH Trigger: GTGTACAGTCTTCCCGATTTGAGGAAGATGATGGCGATGTAGCAATGAATGATCCCCAGGATGGCCCCCGAGTAAGATACAATCCCTATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000010241.14 ENSMUST00000184970.9 |
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| CDS GCA 72 bp | CCGGAGAGATTTAGGGTCTTTAGGTTTGGCGCCTTCTaGACAATGCTAGACATATCATCCAGCTTGTATAGC | + |
|
Preference number: 6 (lower is better) Translates to: PERFRVFRFGAF*TMLDISSSLYS Trigger: GCTATACAAGCTGGATGATATGTCTAGCATTGTGCAGAAGGCGCCAAACCTAAAGACCCTAAATCTCTCCGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010241.14 ENSMUST00000183939.2 ENSMUST00000184970.9 |
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| CDS CAA 72 bp | GATATCCTTCTGTTTTCTCGATCCTGGATCTTATGGTaGACACCCTTTAATGCAGAAGCAGTAGTGGCATCC | + |
|
Preference number: 6 (lower is better) Translates to: DILLFSRSWILW*TPFNAEAVVAS Trigger: GGATGCCACTACTGCTTCTGCATTAAAGGGTGTCAACCATAAGATCCAGGATCGAGAAAACAGAAGGATATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010241.14 ENSMUST00000183939.2 ENSMUST00000184970.9 |
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| CDS CAA 90 bp | ATGATGATAGATATCCTTCTGTTTTCTCGATCCTGGATCTTATGGTaGACACCCTTTAATGCAGAAGCAGTAGTGGCATCCTCCACAAAA | + |
|
Preference number: 6 (lower is better) Translates to: MMIDILLFSRSWILW*TPFNAEAVVASSTK Trigger: TTTTGTGGAGGATGCCACTACTGCTTCTGCATTAAAGGGTGTCAACCATAAGATCCAGGATCGAGAAAACAGAAGGATATCTATCATCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010241.14 ENSMUST00000183939.2 ENSMUST00000184970.9 |
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| CDS CCA 72 bp | TTGATGATGATAGATATCCTTCTGTTTTCTCGATCCTaGATCTTATGGTTGACACCCTTTAATGCAGAAGCA | + |
|
Preference number: 6 (lower is better) Translates to: LMMIDILLFSRS*ILWLTPFNAEA Trigger: TGCTTCTGCATTAAAGGGTGTCAACCATAAGATCCAGGATCGAGAAAACAGAAGGATATCTATCATCATCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010241.14 ENSMUST00000183939.2 ENSMUST00000184970.9 |
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