Pregenerated sensors for NVL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026516Ensembl transcript IDs: ENSMUST00000027797.9
Found 279 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | ACAGACTCACTGGTGGGCAGCCGGCCACTGGGACAGAGGAGACCCTaGAAGGGCTGGCCAGAGCTGGAGCTGCAAGTGAGGCATCCTCCC | + |
Preference number: 1 (lower is better) Translates to: TDSLVGSRPLGQRRP*KGWPELELQVRHPP Trigger: GGGAGGATGCCTCACTTGCAGCTCCAGCTCTGGCCAGCCCTTCCAGGGTCTCCTCTGTCCCAGTGGCCGGCTGCCCACCAGTGAGTCTGT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR CCA 90 bp | AATAAGATCATCTGTGTCGCGGTTCACTCTAGTGGGCGGTGGGGGTaGGGGACAGACAGACTCACTGGTGGGCAGCCGGCCACTGGGACA | + |
Preference number: 1 (lower is better) Translates to: NKIICVAVHSSGRWG*GTDRLTGGQPATGT Trigger: TGTCCCAGTGGCCGGCTGCCCACCAGTGAGTCTGTCTGTCCCCCACCCCCACCGCCCACTAGAGTGAACCGCGACACAGATGATCTTATT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR TCA 90 bp | GCCAGTAGGAGCAGGTGGCCTTTGGCAGTGAGGACACCGTGGAGCTaGCATGTAGAGGTGCCCCCACAAGTCCCACAGTCTGGGCTAAGA | + |
Preference number: 1 (lower is better) Translates to: ASRSRWPLAVRTPWS*HVEVPPQVPQSGLR Trigger: TCTTAGCCCAGACTGTGGGACTTGTGGGGGCACCTCTACATGTCAGCTCCACGGTGTCCTCACTGCCAAAGGCCACCTGCTCCTACTGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR CCA 90 bp | GCCACTGCATGGACAAGCCCCACAACTGCACACGTGGCCTGTACATaGTCACGTGGGGATATTGGCATGCAGTGTCTTCAGAGGCCCACC | + |
Preference number: 1 (lower is better) Translates to: ATAWTSPTTAHVACT*SRGDIGMQCLQRPT Trigger: GGTGGGCCTCTGAAGACACTGCATGCCAATATCCCCACGTGACCATGTACAGGCCACGTGTGCAGTTGTGGGGCTTGTCCATGCAGTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR GCA 90 bp | GCCCACCCTGTGCAACCCTGGGGTTCTGGCCCTCTCATTTCTCACTaGTACCTTACAGGGACCATTGTAGAGAGTGGGCCTTGGCCTCTT | + |
Preference number: 1 (lower is better) Translates to: AHPVQPWGSGPLISH*YLTGTIVESGPWPL Trigger: AAGAGGCCAAGGCCCACTCTCTACAATGGTCCCTGTAAGGTAGCAGTGAGAAATGAGAGGGCCAGAACCCCAGGGTTGCACAGGGTGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR TCA 90 bp | AATCTCAGCACCCAGGAAGCAGAGGCACACAGAACACTGGGAGTCTaGGGCCAGCCTACTCTATACAGTAGGTTGCAGGCCAGTCAGGGG | + |
Preference number: 1 (lower is better) Translates to: NLSTQEAEAHRTLGV*GQPTLYSRLQASQG Trigger: CCCCTGACTGGCCTGCAACCTACTGTATAGAGTAGGCTGGCCTCAGACTCCCAGTGTTCTGTGTGCCTCTGCTTCCTGGGTGCTGAGATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR CCA 90 bp | GCTTGCAGGGAGGCTCTGCTCTGTGTGGCAAGCCTCTCTCCTACATaGCACCTTATATCTAGGGGGTGTCATAGCTCGACATCTCCAGGC | + |
Preference number: 1 (lower is better) Translates to: ACREALLCVASLSPT*HLISRGCHSSTSPG Trigger: GCCTGGAGATGTCGAGCTATGACACCCCCTAGATATAAGGTGCCATGTAGGAGAGAGGCTTGCCACACAGAGCAGAGCCTCCCTGCAAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR CCA 90 bp | TCTTTGGTGCCCCAAGCTGAGCTTGCAGGGAGGCTCTGCTCTGTGTaGCAAGCCTCTCTCCTACATGGCACCTTATATCTAGGGGGTGTC | + |
Preference number: 1 (lower is better) Translates to: SLVPQAELAGRLCSV*QASLLHGTLYLGGV Trigger: GACACCCCCTAGATATAAGGTGCCATGTAGGAGAGAGGCTTGCCACACAGAGCAGAGCCTCCCTGCAAGCTCAGCTTGGGGCACCAAAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR GCA 90 bp | GAAGATGGGAAGGACCTAACTGAAGACACAGCTGAGGAGCATGTGTaGGGGTGTCCTCAGCGACTACGGGGTGGGCTTCTTCCTCTTCAT | + |
Preference number: 1 (lower is better) Translates to: EDGKDLTEDTAEEHV*GCPQRLRGGLLPLH Trigger: ATGAAGAGGAAGAAGCCCACCCCGTAGTCGCTGAGGACACCCGCACACATGCTCCTCAGCTGTGTCTTCAGTTAGGTCCTTCCCATCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR GCA 90 bp | GTCTCTTGTGAGGCTATGCCGGGGCCTAGCAAACACAGAAGTGGATaGTCACAGTCAGCTATTGGATGGATCACAGGGCCCCCAATGGAG | + |
Preference number: 1 (lower is better) Translates to: VSCEAMPGPSKHRSG*SQSAIGWITGPPME Trigger: CTCCATTGGGGGCCCTGTGATCCATCCAATAGCTGACTGTGAGCATCCACTTCTGTGTTTGCTAGGCCCCGGCATAGCCTCACAAGAGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR GCA 90 bp | GTGAAGATGCTGTTGGACCTGGTATCTGAGATGGAGATGATGATCTaGTGGGCCTGCACTGGGTGGGCTCTGTATGTGCTGGTGGAGTAT | + |
Preference number: 1 (lower is better) Translates to: VKMLLDLVSEMEMMI*WACTGWALYVLVEY Trigger: ATACTCCACCAGCACATACAGAGCCCACCCAGTGCAGGCCCAGCAGATCATCATCTCCATCTCAGATACCAGGTCCAACAGCATCTTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR GCA 90 bp | GTGTTGCTGTCTTCAGACACACCAGAAGAGGGCAACAGATCCCATTaGAGAAGGTTGGGAGCCACCATGTGGTTGCTGGGAACTGAACTC | + |
Preference number: 1 (lower is better) Translates to: VLLSSDTPEEGNRSH*RRLGATMWLLGTEL Trigger: GAGTTCAGTTCCCAGCAACCACATGGTGGCTCCCAACCTTCTGCAATGGGATCTGTTGCCCTCTTCTGGTGTGTCTGAAGACAGCAACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR CCA 90 bp | AAGATGCTGTTGGACCTGGTATCTGAGATGGAGATGATGATCTGCTaGGCCTGCACTGGGTGGGCTCTGTATGTGCTGGTGGAGTATGCA | + |
Preference number: 1 (lower is better) Translates to: KMLLDLVSEMEMMIC*ACTGWALYVLVEYA Trigger: TGCATACTCCACCAGCACATACAGAGCCCACCCAGTGCAGGCCCAGCAGATCATCATCTCCATCTCAGATACCAGGTCCAACAGCATCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR TCA 90 bp | TGTCATGGCAGAAGATACTGTGAAGATGCTGTTGGACCTGGTATCTaGGATGGAGATGATGATCTGCTGGGCCTGCACTGGGTGGGCTCT | + |
Preference number: 1 (lower is better) Translates to: CHGRRYCEDAVGPGI*DGDDDLLGLHWVGS Trigger: AGAGCCCACCCAGTGCAGGCCCAGCAGATCATCATCTCCATCTCAGATACCAGGTCCAACAGCATCTTCACAGTATCTTCTGCCATGACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR GCA 90 bp | AGGGCAACAGATCCCATTGCAGAAGGTTGGGAGCCACCATGTGGTTaGTGGGAACTGAACTCAACCCTTGAGTCATCCCTCCAAACCTTA | + |
Preference number: 1 (lower is better) Translates to: RATDPIAEGWEPPCG*WELNSTLESSLQTL Trigger: TAAGGTTTGGAGGGATGACTCAAGGGTTGAGTTCAGTTCCCAGCAACCACATGGTGGCTCCCAACCTTCTGCAATGGGATCTGTTGCCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR CCA 90 bp | GGGTCAACAATAGACAAGACTTCCTGCATGTTTATCCTTAGCTCCTaGGTGCAGAGGCCCCTGCCCCTTGGGAACATGCACTGCTGTATA | + |
Preference number: 1 (lower is better) Translates to: GSTIDKTSCMFILSS*VQRPLPLGNMHCCI Trigger: TATACAGCAGTGCATGTTCCCAAGGGGCAGGGGCCTCTGCACCCAGGAGCTAAGGATAAACATGCAGGAAGTCTTGTCTATTGTTGACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR CCA 90 bp | TGTCTGGTTCTTTGGTGTCCTCCGCTAGGACATCTCACCGTATCCTaGCATCCCAGTGGAAGAGCTTTTCAAGCTACTTACAGAGGGCCA | + |
Preference number: 1 (lower is better) Translates to: CLVLWCPPLGHLTVS*HPSGRAFQATYRGP Trigger: TGGCCCTCTGTAAGTAGCTTGAAAAGCTCTTCCACTGGGATGCCAGGATACGGTGAGATGTCCTAGCGGAGGACACCAAAGAACCAGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR CCA 90 bp | CTGGTATCTGAGATGGAGATGATGATCTGCTGGGCCTGCACTGGGTaGGCTCTGTATGTGCTGGTGGAGTATGCAGACAAGGCAATTTTC | + |
Preference number: 1 (lower is better) Translates to: LVSEMEMMICWACTG*ALYVLVEYADKAIF Trigger: GAAAATTGCCTTGTCTGCATACTCCACCAGCACATACAGAGCCCACCCAGTGCAGGCCCAGCAGATCATCATCTCCATCTCAGATACCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR CCA 90 bp | TCTGGGCTAAGAATGGTACAGAACTGGTGGTTTCCCACTGCATCCTaGTGGGCTCTCAGAGGCTTCAGTATGCATGTGACAGATGCTCCA | + |
Preference number: 1 (lower is better) Translates to: SGLRMVQNWWFPTAS*WALRGFSMHVTDAP Trigger: TGGAGCATCTGTCACATGCATACTGAAGCCTCTGAGAGCCCACCAGGATGCAGTGGGAAACCACCAGTTCTGTACCATTCTTAGCCCAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR CCA 90 bp | GCAACAGATCCCATTGCAGAAGGTTGGGAGCCACCATGTGGTTGCTaGGAACTGAACTCAACCCTTGAGTCATCCCTCCAAACCTTAGGT | + |
Preference number: 1 (lower is better) Translates to: ATDPIAEGWEPPCGC*ELNSTLESSLQTLG Trigger: ACCTAAGGTTTGGAGGGATGACTCAAGGGTTGAGTTCAGTTCCCAGCAACCACATGGTGGCTCCCAACCTTCTGCAATGGGATCTGTTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR TCA 90 bp | GTGGTGACGGTCTGCCCAGTCCCCCAAGGCACTTCCCCGCTTAACTaGCAGGTGTCCTTGGAATCTAATTCCTCTATGAACTTCAAATGT | + |
Preference number: 1 (lower is better) Translates to: VVTVCPVPQGTSPLN*QVSLESNSSMNFKC Trigger: ACATTTGAAGTTCATAGAGGAATTAGATTCCAAGGACACCTGTCAGTTAAGCGGGGAAGTGCCTTGGGGGACTGGGCAGACCGTCACCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR GCA 90 bp | CAGGCTGCCAGGAGAACAGCTTACCTGCAAGGATCTAGTGTTCTGTaGCTACCAGGTAACATGGAGCACAGAATACTTGGCTTCCCAGAA | + |
Preference number: 1 (lower is better) Translates to: QAARRTAYLQGSSVL*LPGNMEHRILGFPE Trigger: TTCTGGGAAGCCAAGTATTCTGTGCTCCATGTTACCTGGTAGGCACAGAACACTAGATCCTTGCAGGTAAGCTGTTCTCCTGGCAGCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR GCA 90 bp | GGCCATTATTGGAAAGAGAGGCCCATTGGTCTTGCAAACTTTTTATaGCTCAGTACAGGGGAATGCCAGGGCCAAGAAGTGGGAGTGGGT | + |
Preference number: 1 (lower is better) Translates to: GHYWKERPIGLANFL*LSTGECQGQEVGVG Trigger: ACCCACTCCCACTTCTTGGCCCTGGCATTCCCCTGTACTGAGGCATAAAAAGTTTGCAAGACCAATGGGCCTCTCTTTCCAATAATGGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR CCA 90 bp | GCCCTTATCCGGATTGCTTGGTGTCTTCAGGAGAAGGTCCTATTATaGCCAATGTTTCTGAACTTGAGCTGCCTGCTGACCCCAAGTAGG | + |
Preference number: 1 (lower is better) Translates to: ALIRIAWCLQEKVLL*PMFLNLSCLLTPSR Trigger: CCTACTTGGGGTCAGCAGGCAGCTCAAGTTCAGAAACATTGGCCATAATAGGACCTTCTCCTGAAGACACCAAGCAATCCGGATAAGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR CCA 90 bp | TCCAGGACCCAACTGACACTTGGTAAGACTGGGAGAAGGCTGCTTTaGACAGACTGTCATGGCAGAAGATACTGTGAAGATGCTGTTGGA | + |
Preference number: 1 (lower is better) Translates to: SRTQLTLGKTGRRLL*TDCHGRRYCEDAVG Trigger: TCCAACAGCATCTTCACAGTATCTTCTGCCATGACAGTCTGTCCAAAGCAGCCTTCTCCCAGTCTTACCAAGTGTCAGTTGGGTCCTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR GCA 90 bp | AGATCATTGGCAGGACAGCAAAGCAAACTGAAATTGAGTCCAACGTaGCACTTTCCCACATCTGGGTACTACTTCTGGGCACTCCCACAT | + |
Preference number: 1 (lower is better) Translates to: RSLAGQQSKLKLSPT*HFPTSGYYFWALPH Trigger: ATGTGGGAGTGCCCAGAAGTAGTACCCAGATGTGGGAAAGTGGCACGTTGGACTCAATTTCAGTTTGCTTTGCTGTCCTGCCAATGATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR TCA 90 bp | TGCCAAATGAAAACACTATCTGCCATATCAGCTCTTCTTGACAACTaGATGCTGGGTCTAAGTGCGTTTATTTCTGGTGGCCTGGACATA | + |
Preference number: 1 (lower is better) Translates to: CQMKTLSAISALLDN*MLGLSAFISGGLDI Trigger: TATGTCCAGGCCACCAGAAATAAACGCACTTAGACCCAGCATTCAGTTGTCAAGAAGAGCTGATATGGCAGATAGTGTTTTCATTTGGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR TCA 90 bp | TGTAATATGCCAAATGAAAACACTATCTGCCATATCAGCTCTTCTTaGCAACTGAATGCTGGGTCTAAGTGCGTTTATTTCTGGTGGCCT | + |
Preference number: 1 (lower is better) Translates to: CNMPNENTICHISSS*QLNAGSKCVYFWWP Trigger: AGGCCACCAGAAATAAACGCACTTAGACCCAGCATTCAGTTGTCAAGAAGAGCTGATATGGCAGATAGTGTTTTCATTTGGCATATTACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR CCA 90 bp | GTAAACTGGCAAGAACAGGCTGAGAAGCAAGGGACTTTTCTGGCATaGCAGTTTTGTTTGTACTGGACCTGTATATTTGTAAAGCTATAT | + |
Preference number: 1 (lower is better) Translates to: VNWQEQAEKQGTFLA*QFCLYWTCIFVKLY Trigger: ATATAGCTTTACAAATATACAGGTCCAGTACAAACAAAACTGCCATGCCAGAAAAGTCCCTTGCTTCTCAGCCTGTTCTTGCCAGTTTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR CAA 90 bp | CTGCTACCTTACAGGGACCATTGTAGAGAGTGGGCCTTGGCCTCTTaGGTGCCCCAAGCTGAGCTTGCAGGGAGGCTCTGCTCTGTGTGG | + |
Preference number: 2 (lower is better) Translates to: LLPYRDHCREWALAS*VPQAELAGRLCSVW Trigger: CCACACAGAGCAGAGCCTCCCTGCAAGCTCAGCTTGGGGCACCAAAGAGGCCAAGGCCCACTCTCTACAATGGTCCCTGTAAGGTAGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR-3UTR CCA 90 bp | AGAGGGCAACAGATCCCATTGCAGAAGGTTGGGAGCCACCATGTGGTTGCTGGGCTCAGGCTCCAGGTGTaGATTGCAGCATGCCCGTGC | + |
Preference number: 2 (lower is better) Translates to: RGQQIPLQKVGSHHVVAGLRLQV*IAACPC Trigger: GCACGGGCATGCTGCAATCCACACCTGGAGCCTGAG...CCCAGCAACCACATGGTGGCTCCCAACCTTCTGCAATGGGATCTGTTGCCCTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR CAA 90 bp | ATTGTAGAGAGTGGGCCTTGGCCTCTTTGGTGCCCCAAGCTGAGCTaGCAGGGAGGCTCTGCTCTGTGTGGCAAGCCTCTCTCCTACATG | + |
Preference number: 2 (lower is better) Translates to: IVESGPWPLWCPKLS*QGGSALCGKPLSYM Trigger: CATGTAGGAGAGAGGCTTGCCACACAGAGCAGAGCCTCCCTGCAAGCTCAGCTTGGGGCACCAAAGAGGCCAAGGCCCACTCTCTACAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR-3UTR TCA 90 bp | TCTGTGGACCCTAACCCGCCCTGCTACTGCTGGTGTGCAGTGGACCCTAGCCAGCTGGCAAGAACAGGCTaGGAAGCAAGGGACTTTTCT | + |
Preference number: 2 (lower is better) Translates to: SVDPNPPCYCWCAVDPSQLARTG*EARDFS Trigger: AGAAAAGTCCCTTGCTTCTCAGCCTGTTCTTGCCAG...CTGGCTAGGGTCCACTGCACACCAGCAGTAGCAGGGCGGGTTAGGGTCCACAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR-3UTR GCA 90 bp | CCCACAAGTCCCACAGTCTGGGCTAAGAATGGTACAGAACTGGTGGTTTCCCACCGTGAGTCTGGCCTCTaGCAGGCTGGACATAGCCCC | + |
Preference number: 2 (lower is better) Translates to: PTSPTVWAKNGTELVVSHRESGL*QAGHSP Trigger: GGGGCTATGTCCAGCCTGGCAGAGGCCAGACTCACG...GTGGGAAACCACCAGTTCTGTACCATTCTTAGCCCAGACTGTGGGACTTGTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR-3UTR CCA 90 bp | TCTGTGGACCCTAACCCGCCCTGCTACTGCTGGTGTGCAGTGGACCCTAGCCAGAGCCTCTCTCCTACATaGCACCTTATATCTAGGGGG | + |
Preference number: 2 (lower is better) Translates to: SVDPNPPCYCWCAVDPSQSLSPT*HLISRG Trigger: CCCCCTAGATATAAGGTGCCATGTAGGAGAGAGGCT...CTGGCTAGGGTCCACTGCACACCAGCAGTAGCAGGGCGGGTTAGGGTCCACAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR-3UTR CCA 90 bp | TTGGTGTCCTCCGCTAGGACATCTCACCGTATCCTGGCATCCCAGTGGAAGAGCCACCCTGTGCAACCCTaGGGTTCTGGCCCTCTCATT | + |
Preference number: 2 (lower is better) Translates to: LVSSARTSHRILASQWKSHPVQP*GSGPLI Trigger: AATGAGAGGGCCAGAACCCCAGGGTTGCACAGGGTG...GCTCTTCCACTGGGATGCCAGGATACGGTGAGATGTCCTAGCGGAGGACACCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR-3UTR CCA 90 bp | TTCCAGGGCCTGAACCTAGCCAGTAGGAGCAGGTGGCCTTTGGCAGTGAGGACATCAGCGACTACGGGGTaGGCTTCTTCCTCTTCATCC | + |
Preference number: 2 (lower is better) Translates to: FQGLNLASRSRWPLAVRTSATTG*ASSSSS Trigger: GGATGAAGAGGAAGAAGCCCACCCCGTAGTCGCTGA...TGTCCTCACTGCCAAAGGCCACCTGCTCCTACTGGCTAGGTTCAGGCCCTGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR-3UTR GCA 90 bp | AGAGAGCGGCAGAGGTTCCAGGGCCTGAACCTAGCCAGTAGGAGCAGGTGGCCTTGTTCACCCATGAGTTaGTACCCCCACCCAATAATG | + |
Preference number: 2 (lower is better) Translates to: RERQRFQGLNLASRSRWPCSPMS*YPHPIM Trigger: CATTATTGGGTGGGGGTAGCAACTCATGGGTGAACA...AGGCCACCTGCTCCTACTGGCTAGGTTCAGGCCCTGGAACCTCTGCCGCTCTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR-3UTR GCA 90 bp | CCCACAAGTCCCACAGTCTGGGCTAAGAATGGTACAGAACTGGTGGTTTCCCACCCTCCAGGCATGGACTaGAGGCTGCCAGGAGAACAG | + |
Preference number: 2 (lower is better) Translates to: PTSPTVWAKNGTELVVSHPPGMD*RLPGEQ Trigger: CTGTTCTCCTGGCAGCCTGCAGTCCATGCCTGGAGG...GTGGGAAACCACCAGTTCTGTACCATTCTTAGCCCAGACTGTGGGACTTGTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR-3UTR CCA 90 bp | TTGGTGTCCTCCGCTAGGACATCTCACCGTATCCTGGCATCCCAGTGGAAGAGCTCCTCTTATTGGGCTTaGGTGGCTGTCCCTTGCCTG | + |
Preference number: 2 (lower is better) Translates to: LVSSARTSHRILASQWKSSSYWA*VAVPCL Trigger: CAGGCAAGGGACAGCCACCCAAGCCCAATAAGAGGA...GCTCTTCCACTGGGATGCCAGGATACGGTGAGATGTCCTAGCGGAGGACACCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR-3UTR CCA 90 bp | CCCACAAGTCCCACAGTCTGGGCTAAGAATGGTACAGAACTGGTGGTTTCCCACGGGCCTTGGCCTCTTTaGTGCCCCAAGCTGAGCTTG | + |
Preference number: 2 (lower is better) Translates to: PTSPTVWAKNGTELVVSHGPWPL*CPKLSL Trigger: CAAGCTCAGCTTGGGGCACCAAAGAGGCCAAGGCCC...GTGGGAAACCACCAGTTCTGTACCATTCTTAGCCCAGACTGTGGGACTTGTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR-3UTR CCA 90 bp | AGAGAGCGGCAGAGGTTCCAGGGCCTGAACCTAGCCAGTAGGAGCAGGTGGCCTGTGTATTCAGAGACTTaGCTGCCAGAAATGTCCTGG | + |
Preference number: 2 (lower is better) Translates to: RERQRFQGLNLASRSRWPVYSET*LPEMSW Trigger: CCAGGACATTTCTGGCAGCCAAGTCTCTGAATACAC...AGGCCACCTGCTCCTACTGGCTAGGTTCAGGCCCTGGAACCTCTGCCGCTCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR-3UTR CCA 90 bp | GCAGGGAGGCTCTGCTCTGTGTGGCAAGCCTCTCTCCTACATGGCACCTTATATCTTATTGGGCTTGGGTaGCTGTCCCTTGCCTGTCAG | + |
Preference number: 2 (lower is better) Translates to: AGRLCSVWQASLLHGTLYLIGLG*LSLACQ Trigger: CTGACAGGCAAGGGACAGCCACCCAAGCCCAATAAG...ATATAAGGTGCCATGTAGGAGAGAGGCTTGCCACACAGAGCAGAGCCTCCCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR-3UTR CCA 90 bp | GCTACTGCTGGTGTGCAGTGGACCCTAGCCAGCCCAGTGCAATGGGTCAACAATAGGCTCTGCTCTGTGTaGCAAGCCTCTCTCCTACAT | + |
Preference number: 2 (lower is better) Translates to: ATAGVQWTLASPVQWVNNRLCSV*QASLLH Trigger: ATGTAGGAGAGAGGCTTGCCACACAGAGCAGAGCCT...ATTGTTGACCCATTGCACTGGGCTGGCTAGGGTCCACTGCACACCAGCAGTAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR-3UTR TCA 90 bp | CCCACAAGTCCCACAGTCTGGGCTAAGAATGGTACAGAACTGGTGGTTTCCCACTGCCCAGGGAGGGACTaGTCCTGTAAGAAGGTTCAG | + |
Preference number: 2 (lower is better) Translates to: PTSPTVWAKNGTELVVSHCPGRD*SCKKVQ Trigger: CTGAACCTTCTTACAGGATCAGTCCCTCCCTGGGCA...GTGGGAAACCACCAGTTCTGTACCATTCTTAGCCCAGACTGTGGGACTTGTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR-3UTR GCA 90 bp | TTCCAGGGCCTGAACCTAGCCAGTAGGAGCAGGTGGCCTTTGGCAGTGAGGACAAGCCCTTATCCGGATTaGTTGGTGTCTTCAGGAGAA | + |
Preference number: 2 (lower is better) Translates to: FQGLNLASRSRWPLAVRTSPYPD*LVSSGE Trigger: TTCTCCTGAAGACACCAAGCAATCCGGATAAGGGCT...TGTCCTCACTGCCAAAGGCCACCTGCTCCTACTGGCTAGGTTCAGGCCCTGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR-3UTR GCA 90 bp | AGAGAGCGGCAGAGGTTCCAGGGCCTGAACCTAGCCAGTAGGAGCAGGTGGCCTATAGACAAGACTTCCTaGATGTTTATCCTTAGCTCC | + |
Preference number: 2 (lower is better) Translates to: RERQRFQGLNLASRSRWPIDKTS*MFILSS Trigger: GGAGCTAAGGATAAACATGCAGGAAGTCTTGTCTAT...AGGCCACCTGCTCCTACTGGCTAGGTTCAGGCCCTGGAACCTCTGCCGCTCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR-3UTR GCA 90 bp | TTCCAGGGCCTGAACCTAGCCAGTAGGAGCAGGTGGCCTTTGGCAGTGAGGACAATTCAGAGACTTGGCTaGCAGAAATGTCCTGGTTAC | + |
Preference number: 2 (lower is better) Translates to: FQGLNLASRSRWPLAVRTIQRLG*QKCPGY Trigger: GTAACCAGGACATTTCTGGCAGCCAAGTCTCTGAAT...TGTCCTCACTGCCAAAGGCCACCTGCTCCTACTGGCTAGGTTCAGGCCCTGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR-3UTR CCA 90 bp | AGAGGGCAACAGATCCCATTGCAGAAGGTTGGGAGCCACCATGTGGTTGCTGGGCAACTGACAAGTACTTaGACCTCTCCGTGCCATTTG | + |
Preference number: 2 (lower is better) Translates to: RGQQIPLQKVGSHHVVAGQLTST*TSPCHL Trigger: CAAATGGCACGGAGAGGTCCAAGTACTTGTCAGTTG...CCCAGCAACCACATGGTGGCTCCCAACCTTCTGCAATGGGATCTGTTGCCCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR-3UTR TCA 90 bp | AGAGGGCAACAGATCCCATTGCAGAAGGTTGGGAGCCACCATGTGGTTGCTGGGCCTGGGAGACAGTGGTaGATGCAATTTTGCTACTTT | + |
Preference number: 2 (lower is better) Translates to: RGQQIPLQKVGSHHVVAGPGRQW*MQFCYF Trigger: AAAGTAGCAAAATTGCATTCACCACTGTCTCCCAGG...CCCAGCAACCACATGGTGGCTCCCAACCTTCTGCAATGGGATCTGTTGCCCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR-3UTR TCA 90 bp | AGAGGGCAACAGATCCCATTGCAGAAGGTTGGGAGCCACCATGTGGTTGCTGGGCATATCAGCTCTTCTTaGCAACTGAATGCTGGGTCT | + |
Preference number: 2 (lower is better) Translates to: RGQQIPLQKVGSHHVVAGHISSS*QLNAGS Trigger: AGACCCAGCATTCAGTTGTCAAGAAGAGCTGATATG...CCCAGCAACCACATGGTGGCTCCCAACCTTCTGCAATGGGATCTGTTGCCCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR-3UTR GCA 90 bp | ATTTCTGGTGGCCTGGACATAAAATACAAGCTGTGTCTGCTGTGGTACAAGTTGTCCTTAGCTCCTGGGTaGAGAGGCCCCTGCCCCTTG | + |
Preference number: 2 (lower is better) Translates to: ISGGLDIKYKLCLLWYKLSLAPG*RGPCPL Trigger: CAAGGGGCAGGGGCCTCTGCACCCAGGAGCTAAGGA...CAACTTGTACCACAGCAGACACAGCTTGTATTTTATGTCCAGGCCACCAGAAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR-3UTR CCA 90 bp | TTGGTGTCCTCCGCTAGGACATCTCACCGTATCCTGGCATCCCAGTGGAAGAGCAGCAAGGGACTTTTCTaGCATGGCAGTTTTGTTTGT | + |
Preference number: 2 (lower is better) Translates to: LVSSARTSHRILASQWKSSKGLF*HGSFVC Trigger: ACAAACAAAACTGCCATGCCAGAAAAGTCCCTTGCT...GCTCTTCCACTGGGATGCCAGGATACGGTGAGATGTCCTAGCGGAGGACACCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR CAA 90 bp | TGCTTTGGACAGACTGTCATGGCAGAAGATACTGTGAAGATGCTGTaGGACCTGGTATCTGAGATGGAGATGATGATCTGCTGGGCCTGC | + |
Preference number: 2 (lower is better) Translates to: CFGQTVMAEDTVKML*DLVSEMEMMICWAC Trigger: GCAGGCCCAGCAGATCATCATCTCCATCTCAGATACCAGGTCCAACAGCATCTTCACAGTATCTTCTGCCATGACAGTCTGTCCAAAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR CAA 90 bp | TGGTGTCTTCAGGAGAAGGTCCTATTATGGCCAATGTTTCTGAACTaGAGCTGCCTGCTGACCCCAAGTAGGAACTATCCAGGACCCAAC | + |
Preference number: 2 (lower is better) Translates to: WCLQEKVLLWPMFLN*SCLLTPSRNYPGPN Trigger: GTTGGGTCCTGGATAGTTCCTACTTGGGGTCAGCAGGCAGCTCAAGTTCAGAAACATTGGCCATAATAGGACCTTCTCCTGAAGACACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR-3UTR GCA 90 bp | ATTTCTGGTGGCCTGGACATAAAATACAAGCTGTGTCTGCTGTGGTACAAGTTGGCTGAGGAGCATGTGTaGGGGTGTCCTCAGCGACTA | + |
Preference number: 2 (lower is better) Translates to: ISGGLDIKYKLCLLWYKLAEEHV*GCPQRL Trigger: TAGTCGCTGAGGACACCCGCACACATGCTCCTCAGC...CAACTTGTACCACAGCAGACACAGCTTGTATTTTATGTCCAGGCCACCAGAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR-3UTR CCA 90 bp | ATTTCTGGTGGCCTGGACATAAAATACAAGCTGTGTCTGCTGTGGTACAAGTTGGAGGCCCCTGCCCCTTaGGAACATGCACTGCTGTAT | + |
Preference number: 2 (lower is better) Translates to: ISGGLDIKYKLCLLWYKLEAPAP*EHALLY Trigger: ATACAGCAGTGCATGTTCCCAAGGGGCAGGGGCCTC...CAACTTGTACCACAGCAGACACAGCTTGTATTTTATGTCCAGGCCACCAGAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR-3UTR GCA 90 bp | CCCACAAGTCCCACAGTCTGGGCTAAGAATGGTACAGAACTGGTGGTTTCCCACTTTTATAGCCTAGACTaGTACCTTTCAAAGCCTGGG | + |
Preference number: 2 (lower is better) Translates to: PTSPTVWAKNGTELVVSHFYSLD*YLSKPG Trigger: CCCAGGCTTTGAAAGGTAGCAGTCTAGGCTATAAAA...GTGGGAAACCACCAGTTCTGTACCATTCTTAGCCCAGACTGTGGGACTTGTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR-3UTR GCA 90 bp | AGGCATTACCACCTGAGAGGATGCAGAGAACAGCTTTACGACTATATCTTTAAATCGACATCTCCAGGCTaGCTGCTTCCCACCCTGCCT | + |
Preference number: 2 (lower is better) Translates to: RHYHLRGCREQLYDYIFKSTSPG*LLPTLP Trigger: AGGCAGGGTGGGAAGCAGGCAGCCTGGAGATGTCGA...TTTAAAGATATAGTCGTAAAGCTGTTCTCTGCATCCTCTCAGGTGGTAATGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR-3UTR CCA 90 bp | CCCACAAGTCCCACAGTCTGGGCTAAGAATGGTACAGAACTGGTGGTTTCCCACAAGACGTGCACAACCTaGATTACTACAAGAAGACCA | + |
Preference number: 2 (lower is better) Translates to: PTSPTVWAKNGTELVVSHKTCTT*ITTRRP Trigger: TGGTCTTCTTGTAGTAATCCAGGTTGTGCACGTCTT...GTGGGAAACCACCAGTTCTGTACCATTCTTAGCCCAGACTGTGGGACTTGTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR-3UTR CCA 90 bp | AGGCATTACCACCTGAGAGGATGCAGAGAACAGCTTTACGACTATATCTTTAAAAATGGCCTCCAGGCATaGACTGCAGGCTGCCAGGAG | + |
Preference number: 2 (lower is better) Translates to: RHYHLRGCREQLYDYIFKNGLQA*TAGCQE Trigger: CTCCTGGCAGCCTGCAGTCCATGCCTGGAGGCCATT...TTTAAAGATATAGTCGTAAAGCTGTTCTCTGCATCCTCTCAGGTGGTAATGCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR-3UTR CCA 90 bp | AGAGGGCAACAGATCCCATTGCAGAAGGTTGGGAGCCACCATGTGGTTGCTGGGGATGATGAGCGTGACTaGAGAATTAGAAGTAAATGT | + |
Preference number: 2 (lower is better) Translates to: RGQQIPLQKVGSHHVVAGDDERD*RIRSKC Trigger: ACATTTACTTCTAATTCTCCAGTCACGCTCATCATC...CCCAGCAACCACATGGTGGCTCCCAACCTTCTGCAATGGGATCTGTTGCCCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR-3UTR GCA 90 bp | GACTTTTCTGGCATGGCAGTTTTGTTTGTACTGGACCTGTATATTTGTAAAGCTTGGGTGGCTGTCCCTTaGCTGTCAGTCAGCAGGGTC | + |
Preference number: 2 (lower is better) Translates to: DFSGMAVLFVLDLYICKAWVAVP*LSVSRV Trigger: GACCCTGCTGACTGACAGGCAAGGGACAGCCACCCA...AGCTTTACAAATATACAGGTCCAGTACAAACAAAACTGCCATGCCAGAAAAGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR-3UTR CCA 90 bp | AGGCATTACCACCTGAGAGGATGCAGAGAACAGCTTTACGACTATATCTTTAAAGAGATGATGATCTGCTaGGCCTGCACTGGGTGGGCT | + |
Preference number: 2 (lower is better) Translates to: RHYHLRGCREQLYDYIFKEMMIC*ACTGWA Trigger: AGCCCACCCAGTGCAGGCCCAGCAGATCATCATCTC...TTTAAAGATATAGTCGTAAAGCTGTTCTCTGCATCCTCTCAGGTGGTAATGCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR-3UTR TCA 90 bp | AGGCATTACCACCTGAGAGGATGCAGAGAACAGCTTTACGACTATATCTTTAAAGTGGCCTGCTACCTGTaGAGTGGATGGAATCAGAGG | + |
Preference number: 2 (lower is better) Translates to: RHYHLRGCREQLYDYIFKVACYL*SGWNQR Trigger: CCTCTGATTCCATCCACTTCACAGGTAGCAGGCCAC...TTTAAAGATATAGTCGTAAAGCTGTTCTCTGCATCCTCTCAGGTGGTAATGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR-3UTR GCA 90 bp | GACTGGAGAATTAGAAGTAAATGTCAGAAAGTCTTAAATAGTGAATCTGAGCAGGGGTGCAGAGGCCCCTaGCCCTTGGGAACATGCACT | + |
Preference number: 2 (lower is better) Translates to: DWRIRSKCQKVLNSESEQGCRGP*PLGTCT Trigger: AGTGCATGTTCCCAAGGGGCAGGGGCCTCTGCACCC...CTGCTCAGATTCACTATTTAAGACTTTCTGACATTTACTTCTAATTCTCCAGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR-3UTR GCA 90 bp | CCAGAGCTTGTGTCTCTAGCTGCATATGTATCAGAAGATGGCCTAGTTGGCCATGGAGAACAGCTTACCTaGAAGGATCTAGTGTTCTGT | + |
Preference number: 2 (lower is better) Translates to: PELVSLAAYVSEDGLVGHGEQLT*KDLVFC Trigger: ACAGAACACTAGATCCTTGCAGGTAAGCTGTTCTCC...ATGGCCAACTAGGCCATCTTCTGATACATATGCAGCTAGAGACACAAGCTCTGG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR-3UTR GCA 90 bp | GACTGGAGAATTAGAAGTAAATGTCAGAAAGTCTTAAATAGTGAATCTGAGCAGAACCCGCCCTGCTACTaGTGGTGTGCAGTGGACCCT | + |
Preference number: 2 (lower is better) Translates to: DWRIRSKCQKVLNSESEQNPPCY*WCAVDP Trigger: AGGGTCCACTGCACACCAGCAGTAGCAGGGCGGGTT...CTGCTCAGATTCACTATTTAAGACTTTCTGACATTTACTTCTAATTCTCCAGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR CAA 90 bp | CAAAATAGAGTAAGATCATTGGCAGGACAGCAAAGCAAACTGAAATaGAGTCCAACGTGCCACTTTCCCACATCTGGGTACTACTTCTGG | + |
Preference number: 2 (lower is better) Translates to: QNRVRSLAGQQSKLK*SPTCHFPTSGYYFW Trigger: CCAGAAGTAGTACCCAGATGTGGGAAAGTGGCACGTTGGACTCAATTTCAGTTTGCTTTGCTGTCCTGCCAATGATCTTACTCTATTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR-3UTR GCA 90 bp | GACTGGAGAATTAGAAGTAAATGTCAGAAAGTCTTAAATAGTGAATCTGAGCAGCCTTGGCCTCTTTGGTaGCCCAAGCTGAGCTTGCAG | + |
Preference number: 2 (lower is better) Translates to: DWRIRSKCQKVLNSESEQPWPLW*PKLSLQ Trigger: CTGCAAGCTCAGCTTGGGGCACCAAAGAGGCCAAGG...CTGCTCAGATTCACTATTTAAGACTTTCTGACATTTACTTCTAATTCTCCAGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR-3UTR TCA 90 bp | GACTGGAGAATTAGAAGTAAATGTCAGAAAGTCTTAAATAGTGAATCTGAGCAGTGTATAGTGATCTCCTaGGTGGCCAGGGCCAGGAAG | + |
Preference number: 2 (lower is better) Translates to: DWRIRSKCQKVLNSESEQCIVIS*VARARK Trigger: CTTCCTGGCCCTGGCCACTCAGGAGATCACTATACA...CTGCTCAGATTCACTATTTAAGACTTTCTGACATTTACTTCTAATTCTCCAGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR-3UTR GCA 90 bp | GACTGGAGAATTAGAAGTAAATGTCAGAAAGTCTTAAATAGTGAATCTGAGCAGCTTACAGAGGGCCACTaGATGGACAAGCCCCACAAC | + |
Preference number: 2 (lower is better) Translates to: DWRIRSKCQKVLNSESEQLTEGH*MDKPHN Trigger: GTTGTGGGGCTTGTCCATGCAGTGGCCCTCTGTAAG...CTGCTCAGATTCACTATTTAAGACTTTCTGACATTTACTTCTAATTCTCCAGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR-3UTR GCA 90 bp | ATTTCTGGTGGCCTGGACATAAAATACAAGCTGTGTCTGCTGTGGTACAAGTTGTGTGCTGGTGGAGTATaGAGACAAGGCAATTTTCAA | + |
Preference number: 2 (lower is better) Translates to: ISGGLDIKYKLCLLWYKLCAGGV*RQGNFQ Trigger: TTGAAAATTGCCTTGTCTGCATACTCCACCAGCACA...CAACTTGTACCACAGCAGACACAGCTTGTATTTTATGTCCAGGCCACCAGAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR-3UTR CCA 90 bp | GACTGGAGAATTAGAAGTAAATGTCAGAAAGTCTTAAATAGTGAATCTGAGCAGTTTCCCACTGCATCCTaGTGGGCTCTCAGAGGCTTC | + |
Preference number: 2 (lower is better) Translates to: DWRIRSKCQKVLNSESEQFPTAS*WALRGF Trigger: GAAGCCTCTGAGAGCCCACCAGGATGCAGTGGGAAA...CTGCTCAGATTCACTATTTAAGACTTTCTGACATTTACTTCTAATTCTCCAGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR-3UTR GCA 90 bp | ATTTCTGGTGGCCTGGACATAAAATACAAGCTGTGTCTGCTGTGGTACAAGTTGTTTTACAAGTTGTTTTaGTGCAGGCTTAACACTCCC | + |
Preference number: 2 (lower is better) Translates to: ISGGLDIKYKLCLLWYKLFYKLF*CRLNTP Trigger: GGGAGTGTTAAGCCTGCAGCAAAACAACTTGTAAAA...CAACTTGTACCACAGCAGACACAGCTTGTATTTTATGTCCAGGCCACCAGAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR-3UTR CCA 90 bp | GACTGGAGAATTAGAAGTAAATGTCAGAAAGTCTTAAATAGTGAATCTGAGCAGTTACAGACTTTGGCCTaGCCCAAGACGTGCACAACC | + |
Preference number: 2 (lower is better) Translates to: DWRIRSKCQKVLNSESEQLQTLA*PKTCTT Trigger: GGTTGTGCACGTCTTGGGCCAGGCCAAAGTCTGTAA...CTGCTCAGATTCACTATTTAAGACTTTCTGACATTTACTTCTAATTCTCCAGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR-3UTR CCA 90 bp | AGGCATTACCACCTGAGAGGATGCAGAGAACAGCTTTACGACTATATCTTTAAACTAGTTGGCCATTATTaGAAAGAGAGGCCCATTGGT | + |
Preference number: 2 (lower is better) Translates to: RHYHLRGCREQLYDYIFKLVGHY*KERPIG Trigger: ACCAATGGGCCTCTCTTTCCAATAATGGCCAACTAG...TTTAAAGATATAGTCGTAAAGCTGTTCTCTGCATCCTCTCAGGTGGTAATGCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR CAA 90 bp | GAACAGGCTGAGAAGCAAGGGACTTTTCTGGCATGGCAGTTTTGTTaGTACTGGACCTGTATATTTGTAAAGCTATATTTATCAACTCCC | + |
Preference number: 2 (lower is better) Translates to: EQAEKQGTFLAWQFC*YWTCIFVKLYLSTP Trigger: GGGAGTTGATAAATATAGCTTTACAAATATACAGGTCCAGTACAAACAAAACTGCCATGCCAGAAAAGTCCCTTGCTTCTCAGCCTGTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR CAA 90 bp | TCTAATTCCTCTATGAACTTCAAATGTAGCCCTTATCCGGATTGCTaGGTGTCTTCAGGAGAAGGTCCTATTATGGCCAATGTTTCTGAA | + |
Preference number: 2 (lower is better) Translates to: SNSSMNFKCSPYPDC*VSSGEGPIMANVSE Trigger: TTCAGAAACATTGGCCATAATAGGACCTTCTCCTGAAGACACCAAGCAATCCGGATAAGGGCTACATTTGAAGTTCATAGAGGAATTAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR-3UTR TCA 90 bp | GACTGGAGAATTAGAAGTAAATGTCAGAAAGTCTTAAATAGTGAATCTGAGCAGGCTTCAGTATGCATGTaGCAGATGCTCCATCCTCAG | + |
Preference number: 2 (lower is better) Translates to: DWRIRSKCQKVLNSESEQASVCM*QMLHPQ Trigger: CTGAGGATGGAGCATCTGTCACATGCATACTGAAGC...CTGCTCAGATTCACTATTTAAGACTTTCTGACATTTACTTCTAATTCTCCAGTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR-3UTR CCA 90 bp | GACTGGAGAATTAGAAGTAAATGTCAGAAAGTCTTAAATAGTGAATCTGAGCAGGCCAGCCCAGTGCAATaGGTCAACAATAGACAAGAC | + |
Preference number: 2 (lower is better) Translates to: DWRIRSKCQKVLNSESEQASPVQ*VNNRQD Trigger: GTCTTGTCTATTGTTGACCCATTGCACTGGGCTGGC...CTGCTCAGATTCACTATTTAAGACTTTCTGACATTTACTTCTAATTCTCCAGTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR-3UTR CCA 90 bp | GACTGGAGAATTAGAAGTAAATGTCAGAAAGTCTTAAATAGTGAATCTGAGCAGAGAAGATGGCCTAGTTaGCCATTATTGGAAAGAGAG | + |
Preference number: 2 (lower is better) Translates to: DWRIRSKCQKVLNSESEQRRWPS*PLLERE Trigger: CTCTCTTTCCAATAATGGCCAACTAGGCCATCTTCT...CTGCTCAGATTCACTATTTAAGACTTTCTGACATTTACTTCTAATTCTCCAGTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR-3UTR CCA 90 bp | GACTGGAGAATTAGAAGTAAATGTCAGAAAGTCTTAAATAGTGAATCTGAGCAGGAAAGAGAGGCCCATTaGTCTTGCAAACTTTTTATG | + |
Preference number: 2 (lower is better) Translates to: DWRIRSKCQKVLNSESEQEREAH*SCKLFM Trigger: CATAAAAAGTTTGCAAGACCAATGGGCCTCTCTTTC...CTGCTCAGATTCACTATTTAAGACTTTCTGACATTTACTTCTAATTCTCCAGTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR-3UTR GCA 90 bp | GACTGGAGAATTAGAAGTAAATGTCAGAAAGTCTTAAATAGTGAATCTGAGCAGACAGATTATTCTAATTaGTATGTATTCCAGGCAGGA | + |
Preference number: 2 (lower is better) Translates to: DWRIRSKCQKVLNSESEQTDYSN*YVFQAG Trigger: TCCTGCCTGGAATACATAGCAATTAGAATAATCTGT...CTGCTCAGATTCACTATTTAAGACTTTCTGACATTTACTTCTAATTCTCCAGTC 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR CCA 72 bp | ATCTGTGTCGCGGTTCACTCTAGTGGGCGGTGGGGGTaGGGGACAGACAGACTCACTGGTGGGCAGCCGGCC | + |
Preference number: 3 (lower is better) Translates to: ICVAVHSSGRWG*GTDRLTGGQPA Trigger: GGCCGGCTGCCCACCAGTGAGTCTGTCTGTCCCCCACCCCCACCGCCCACTAGAGTGAACCGCGACACAGAT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR GCA 72 bp | GCCCCAGCCAATGTTTCTGTGGACCCTAACCCGCCCTaGTACTGCTGGTGTGCAGTGGACCCTAGCCAGCCC | + |
Preference number: 3 (lower is better) Translates to: APANVSVDPNPP*YCWCAVDPSQP Trigger: GGGCTGGCTAGGGTCCACTGCACACCAGCAGTAGCAGGGCGGGTTAGGGTCCACAGAAACATTGGCTGGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR-3UTR CAA 90 bp | TCTGTGGACCCTAACCCGCCCTGCTACTGCTGGTGTGCAGTGGACCCTAGCCAGTGGGCCTTGGCCTCTTaGGTGCCCCAAGCTGAGCTT | + |
Preference number: 3 (lower is better) Translates to: SVDPNPPCYCWCAVDPSQWALAS*VPQAEL Trigger: AAGCTCAGCTTGGGGCACCAAAGAGGCCAAGGCCCA...CTGGCTAGGGTCCACTGCACACCAGCAGTAGCAGGGCGGGTTAGGGTCCACAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR CCA 72 bp | GCAGTCCCACAGACCAAGCCCCAGCCAATGTTTCTGTaGACCCTAACCCGCCCTGCTACTGCTGGTGTGCAG | + |
Preference number: 3 (lower is better) Translates to: AVPQTKPQPMFL*TLTRPATAGVQ Trigger: CTGCACACCAGCAGTAGCAGGGCGGGTTAGGGTCCACAGAAACATTGGCTGGGGCTTGGTCTGTGGGACTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR-3UTR CAA 90 bp | AGAGAGCGGCAGAGGTTCCAGGGCCTGAACCTAGCCAGTAGGAGCAGGTGGCCTTGGGAGAAGGCTGCTTaGGACAGACTGTCATGGCAG | + |
Preference number: 3 (lower is better) Translates to: RERQRFQGLNLASRSRWPWEKAA*DRLSWQ Trigger: CTGCCATGACAGTCTGTCCAAAGCAGCCTTCTCCCA...AGGCCACCTGCTCCTACTGGCTAGGTTCAGGCCCTGGAACCTCTGCCGCTCTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR TCA 72 bp | AGCAGGTGGCCTTTGGCAGTGAGGACACCGTGGAGCTaGCATGTAGAGGTGCCCCCACAAGTCCCACAGTCT | + |
Preference number: 3 (lower is better) Translates to: SRWPLAVRTPWS*HVEVPPQVPQS Trigger: AGACTGTGGGACTTGTGGGGGCACCTCTACATGTCAGCTCCACGGTGTCCTCACTGCCAAAGGCCACCTGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR GCA 72 bp | TCTTTGGTGCCCCAAGCTGAGCTTGCAGGGAGGCTCTaGTCTGTGTGGCAAGCCTCTCTCCTACATGGCACC | + |
Preference number: 3 (lower is better) Translates to: SLVPQAELAGRL*SVWQASLLHGT Trigger: GGTGCCATGTAGGAGAGAGGCTTGCCACACAGAGCAGAGCCTCCCTGCAAGCTCAGCTTGGGGCACCAAAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR CCA 72 bp | ACAGGGACCATTGTAGAGAGTGGGCCTTGGCCTCTTTaGTGCCCCAAGCTGAGCTTGCAGGGAGGCTCTGCT | + |
Preference number: 3 (lower is better) Translates to: TGTIVESGPWPL*CPKLSLQGGSA Trigger: AGCAGAGCCTCCCTGCAAGCTCAGCTTGGGGCACCAAAGAGGCCAAGGCCCACTCTCTACAATGGTCCCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR CCA 72 bp | CTCTCCGTGCCATTTGAGCAGTCCTCTCCAGGTGGTTaGGACACTCCTAGCTCCAGCCTGTCCAGGGATGAC | + |
Preference number: 3 (lower is better) Translates to: LSVPFEQSSPGG*DTPSSSLSRDD Trigger: GTCATCCCTGGACAGGCTGGAGCTAGGAGTGTCCCAACCACCTGGAGAGGACTGCTCAAATGGCACGGAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR-3UTR CAA 90 bp | AGAGGGCAACAGATCCCATTGCAGAAGGTTGGGAGCCACCATGTGGTTGCTGGGAGAGGCCCCTGCCCCTaGGGAACATGCACTGCTGTA | + |
Preference number: 3 (lower is better) Translates to: RGQQIPLQKVGSHHVVAGRGPCP*GTCTAV Trigger: TACAGCAGTGCATGTTCCCAAGGGGCAGGGGCCTCT...CCCAGCAACCACATGGTGGCTCCCAACCTTCTGCAATGGGATCTGTTGCCCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR-3UTR CAA 90 bp | CCCACAAGTCCCACAGTCTGGGCTAAGAATGGTACAGAACTGGTGGTTTCCCACTGCCCCAAGCTGAGCTaGCAGGGAGGCTCTGCTCTG | + |
Preference number: 3 (lower is better) Translates to: PTSPTVWAKNGTELVVSHCPKLS*QGGSAL Trigger: CAGAGCAGAGCCTCCCTGCAAGCTCAGCTTGGGGCA...GTGGGAAACCACCAGTTCTGTACCATTCTTAGCCCAGACTGTGGGACTTGTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR CCA 72 bp | AATGTTTCTGTGGACCCTAACCCGCCCTGCTACTGCTaGTGTGCAGTGGACCCTAGCCAGCCCAGTGCAATG | + |
Preference number: 3 (lower is better) Translates to: NVSVDPNPPCYC*CAVDPSQPSAM Trigger: CATTGCACTGGGCTGGCTAGGGTCCACTGCACACCAGCAGTAGCAGGGCGGGTTAGGGTCCACAGAAACATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
||
3UTR-3UTR CAA 90 bp | CCCACAAGTCCCACAGTCTGGGCTAAGAATGGTACAGAACTGGTGGTTTCCCACTTGGGTGGCTGTCCCTaGCCTGTCAGTCAGCAGGGT | + |
Preference number: 3 (lower is better) Translates to: PTSPTVWAKNGTELVVSHLGGCP*PVSQQG Trigger: ACCCTGCTGACTGACAGGCAAGGGACAGCCACCCAA...GTGGGAAACCACCAGTTCTGTACCATTCTTAGCCCAGACTGTGGGACTTGTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
||
3UTR GCA 72 bp | CTTACAGAGGGCCACTGCATGGACAAGCCCCACAACTaGACACGTGGCCTGTACATGGTCACGTGGGGATAT | + |
Preference number: 3 (lower is better) Translates to: LTEGHCMDKPHN*TRGLYMVTWGY Trigger: ATATCCCCACGTGACCATGTACAGGCCACGTGTGCAGTTGTGGGGCTTGTCCATGCAGTGGCCCTCTGTAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
||
3UTR GCA 72 bp | GAGGCTATGCCGGGGCCTAGCAAACACAGAAGTGGATaGTCACAGTCAGCTATTGGATGGATCACAGGGCCC | + |
Preference number: 3 (lower is better) Translates to: EAMPGPSKHRSG*SQSAIGWITGP Trigger: GGGCCCTGTGATCCATCCAATAGCTGACTGTGAGCATCCACTTCTGTGTTTGCTAGGCCCCGGCATAGCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
||
3UTR CCA 72 bp | TCAGTCAGCAGGGTCAGGACAGTGGCTCAGGGTTCTTaGGGCCTAGCACATGGTTTATCAGCCCACACTAGC | + |
Preference number: 3 (lower is better) Translates to: SVSRVRTVAQGS*GLAHGLSAHTS Trigger: GCTAGTGTGGGCTGATAAACCATGTGCTAGGCCCCAAGAACCCTGAGCCACTGTCCTGACCCTGCTGACTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
||
3UTR CCA 72 bp | TGCTACCTTACAGGGACCATTGTAGAGAGTGGGCCTTaGCCTCTTTGGTGCCCCAAGCTGAGCTTGCAGGGA | + |
Preference number: 3 (lower is better) Translates to: CYLTGTIVESGP*PLWCPKLSLQG Trigger: TCCCTGCAAGCTCAGCTTGGGGCACCAAAGAGGCCAAGGCCCACTCTCTACAATGGTCCCTGTAAGGTAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
||
3UTR CCA 72 bp | ACGTTAAGAGGCCCACCCTGTGCAACCCTGGGGTTCTaGCCCTCTCATTTCTCACTGCTACCTTACAGGGAC | + |
Preference number: 3 (lower is better) Translates to: TLRGPPCATLGF*PSHFSLLPYRD Trigger: GTCCCTGTAAGGTAGCAGTGAGAAATGAGAGGGCCAGAACCCCAGGGTTGCACAGGGTGGGCCTCTTAACGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
||
3UTR GCA 72 bp | TTTTACTCCTCTTATTGGGCTTGGGTGGCTGTCCCTTaGCTGTCAGTCAGCAGGGTCAGGACAGTGGCTCAG | + |
Preference number: 3 (lower is better) Translates to: FYSSYWAWVAVP*LSVSRVRTVAQ Trigger: CTGAGCCACTGTCCTGACCCTGCTGACTGACAGGCAAGGGACAGCCACCCAAGCCCAATAAGAGGAGTAAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
||
3UTR CCA 72 bp | CCCCAAGCTGAGCTTGCAGGGAGGCTCTGCTCTGTGTaGCAAGCCTCTCTCCTACATGGCACCTTATATCTA | + |
Preference number: 3 (lower is better) Translates to: PQAELAGRLCSV*QASLLHGTLYL Trigger: TAGATATAAGGTGCCATGTAGGAGAGAGGCTTGCCACACAGAGCAGAGCCTCCCTGCAAGCTCAGCTTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
||
3UTR CCA 72 bp | TGGACAAGCCCCACAACTGCACACGTGGCCTGTACATaGTCACGTGGGGATATTGGCATGCAGTGTCTTCAG | + |
Preference number: 3 (lower is better) Translates to: WTSPTTAHVACT*SRGDIGMQCLQ Trigger: CTGAAGACACTGCATGCCAATATCCCCACGTGACCATGTACAGGCCACGTGTGCAGTTGTGGGGCTTGTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
||
3UTR CCA 72 bp | GAGATGGAGATGATGATCTGCTGGGCCTGCACTGGGTaGGCTCTGTATGTGCTGGTGGAGTATGCAGACAAG | + |
Preference number: 3 (lower is better) Translates to: EMEMMICWACTG*ALYVLVEYADK Trigger: CTTGTCTGCATACTCCACCAGCACATACAGAGCCCACCCAGTGCAGGCCCAGCAGATCATCATCTCCATCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
||
3UTR GCA 72 bp | GGAAGACCAAATGAGAACGTTAAGAGGCCCACCCTGTaGAACCCTGGGGTTCTGGCCCTCTCATTTCTCACT | + |
Preference number: 3 (lower is better) Translates to: GRPNENVKRPTL*NPGVLALSFLT Trigger: AGTGAGAAATGAGAGGGCCAGAACCCCAGGGTTGCACAGGGTGGGCCTCTTAACGTTCTCATTTGGTCTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
||
3UTR GCA 72 bp | CTGGTATCTGAGATGGAGATGATGATCTGCTGGGCCTaGACTGGGTGGGCTCTGTATGTGCTGGTGGAGTAT | + |
Preference number: 3 (lower is better) Translates to: LVSEMEMMICWA*TGWALYVLVEY Trigger: ATACTCCACCAGCACATACAGAGCCCACCCAGTGCAGGCCCAGCAGATCATCATCTCCATCTCAGATACCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
||
3UTR GCA 72 bp | GATCCCATTGCAGAAGGTTGGGAGCCACCATGTGGTTaGTGGGAACTGAACTCAACCCTTGAGTCATCCCTC | + |
Preference number: 3 (lower is better) Translates to: DPIAEGWEPPCG*WELNSTLESSL Trigger: GAGGGATGACTCAAGGGTTGAGTTCAGTTCCCAGCAACCACATGGTGGCTCCCAACCTTCTGCAATGGGATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
||
3UTR GCA 72 bp | TCTTCAGACACACCAGAAGAGGGCAACAGATCCCATTaGAGAAGGTTGGGAGCCACCATGTGGTTGCTGGGA | + |
Preference number: 3 (lower is better) Translates to: SSDTPEEGNRSH*RRLGATMWLLG Trigger: TCCCAGCAACCACATGGTGGCTCCCAACCTTCTGCAATGGGATCTGTTGCCCTCTTCTGGTGTGTCTGAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
||
3UTR CCA 72 bp | ATAGACAAGACTTCCTGCATGTTTATCCTTAGCTCCTaGGTGCAGAGGCCCCTGCCCCTTGGGAACATGCAC | + |
Preference number: 3 (lower is better) Translates to: IDKTSCMFILSS*VQRPLPLGNMH Trigger: GTGCATGTTCCCAAGGGGCAGGGGCCTCTGCACCCAGGAGCTAAGGATAAACATGCAGGAAGTCTTGTCTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
||
3UTR CCA 72 bp | TTCAAGAGTTCCTTCTGGCATAATGGCCTCCAGGCATaGACTGCAGGCTGCCAGGAGAACAGCTTACCTGCA | + |
Preference number: 3 (lower is better) Translates to: FKSSFWHNGLQA*TAGCQENSLPA Trigger: TGCAGGTAAGCTGTTCTCCTGGCAGCCTGCAGTCCATGCCTGGAGGCCATTATGCCAGAAGGAACTCTTGAA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
||
3UTR CCA 72 bp | GCTGGGCCTGCACTGGGTGGGCTCTGTATGTGCTGGTaGAGTATGCAGACAAGGCAATTTTCAAGAGTTCCT | + |
Preference number: 3 (lower is better) Translates to: AGPALGGLCMCW*SMQTRQFSRVP Trigger: AGGAACTCTTGAAAATTGCCTTGTCTGCATACTCCACCAGCACATACAGAGCCCACCCAGTGCAGGCCCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
||
3UTR CCA 72 bp | CCCATTGCAGAAGGTTGGGAGCCACCATGTGGTTGCTaGGAACTGAACTCAACCCTTGAGTCATCCCTCCAA | + |
Preference number: 3 (lower is better) Translates to: PIAEGWEPPCGC*ELNSTLESSLQ Trigger: TTGGAGGGATGACTCAAGGGTTGAGTTCAGTTCCCAGCAACCACATGGTGGCTCCCAACCTTCTGCAATGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
||
3UTR-3UTR CAA 90 bp | GCAGGGAGGCTCTGCTCTGTGTGGCAAGCCTCTCTCCTACATGGCACCTTATATTTTTTACTCCTCTTATaGGGCTTGGGTGGCTGTCCC | + |
Preference number: 3 (lower is better) Translates to: AGRLCSVWQASLLHGTLYFLLLL*GLGGCP Trigger: GGGACAGCCACCCAAGCCCAATAAGAGGAGTAAAAA...ATATAAGGTGCCATGTAGGAGAGAGGCTTGCCACACAGAGCAGAGCCTCCCTGC 53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
||
3UTR-3UTR CAA 90 bp | TCTGTGGACCCTAACCCGCCCTGCTACTGCTGGTGTGCAGTGGACCCTAGCCAGGCATGGCAGTTTTGTTaGTACTGGACCTGTATATTT | + |
Preference number: 3 (lower is better) Translates to: SVDPNPPCYCWCAVDPSQAWQFC*YWTCIF Trigger: AAATATACAGGTCCAGTACAAACAAAACTGCCATGC...CTGGCTAGGGTCCACTGCACACCAGCAGTAGCAGGGCGGGTTAGGGTCCACAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
||
3UTR TCA 72 bp | GTCTGCCCAGTCCCCCAAGGCACTTCCCCGCTTAACTaGCAGGTGTCCTTGGAATCTAATTCCTCTATGAAC | + |
Preference number: 3 (lower is better) Translates to: VCPVPQGTSPLN*QVSLESNSSMN Trigger: GTTCATAGAGGAATTAGATTCCAAGGACACCTGTCAGTTAAGCGGGGAAGTGCCTTGGGGGACTGGGCAGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
||
3UTR GCA 72 bp | GCCCAGTGCAATGGGTCAACAATAGACAAGACTTCCTaGATGTTTATCCTTAGCTCCTGGGTGCAGAGGCCC | + |
Preference number: 3 (lower is better) Translates to: AQCNGSTIDKTS*MFILSSWVQRP Trigger: GGGCCTCTGCACCCAGGAGCTAAGGATAAACATGCAGGAAGTCTTGTCTATTGTTGACCCATTGCACTGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
||
3UTR GCA 72 bp | TGGGCTAAGAATGGTACAGAACTGGTGGTTTCCCACTaGATCCTGGTGGGCTCTCAGAGGCTTCAGTATGCA | + |
Preference number: 3 (lower is better) Translates to: WAKNGTELVVSH*ILVGSQRLQYA Trigger: TGCATACTGAAGCCTCTGAGAGCCCACCAGGATGCAGTGGGAAACCACCAGTTCTGTACCATTCTTAGCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
||
3UTR CCA 72 bp | TCTGCTGGGCCTGCACTGGGTGGGCTCTGTATGTGCTaGTGGAGTATGCAGACAAGGCAATTTTCAAGAGTT | + |
Preference number: 3 (lower is better) Translates to: SAGPALGGLCMC*WSMQTRQFSRV Trigger: AACTCTTGAAAATTGCCTTGTCTGCATACTCCACCAGCACATACAGAGCCCACCCAGTGCAGGCCCAGCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
||
3UTR-3UTR CAA 90 bp | CCAGAGCTTGTGTCTCTAGCTGCATATGTATCAGAAGATGGCCTAGTTGGCCATTGTAGAGAGTGGGCCTaGGCCTCTTTGGTGCCCCAA | + |
Preference number: 3 (lower is better) Translates to: PELVSLAAYVSEDGLVGHCREWA*ASLVPQ Trigger: TTGGGGCACCAAAGAGGCCAAGGCCCACTCTCTACA...ATGGCCAACTAGGCCATCTTCTGATACATATGCAGCTAGAGACACAAGCTCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
||
3UTR-3UTR CAA 90 bp | CCCACAAGTCCCACAGTCTGGGCTAAGAATGGTACAGAACTGGTGGTTTCCCACTCAACTGACAAGTACTaGGACCTCTCCGTGCCATTT | + |
Preference number: 3 (lower is better) Translates to: PTSPTVWAKNGTELVVSHSTDKY*DLSVPF Trigger: AAATGGCACGGAGAGGTCCAAGTACTTGTCAGTTGA...GTGGGAAACCACCAGTTCTGTACCATTCTTAGCCCAGACTGTGGGACTTGTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
||
3UTR GCA 72 bp | ATAGCTCGACATCTCCAGGCTGCCTGCTTCCCACCCTaGCTCTCAGACACAAATTACAGGTACCTGAAAAAG | + |
Preference number: 3 (lower is better) Translates to: IARHLQAACFPP*LSDTNYRYLKK Trigger: CTTTTTCAGGTACCTGTAATTTGTGTCTGAGAGGCAGGGTGGGAAGCAGGCAGCCTGGAGATGTCGAGCTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
||
3UTR CCA 72 bp | GCTGGTGTGCAGTGGACCCTAGCCAGCCCAGTGCAATaGGTCAACAATAGACAAGACTTCCTGCATGTTTAT | + |
Preference number: 3 (lower is better) Translates to: AGVQWTLASPVQ*VNNRQDFLHVY Trigger: ATAAACATGCAGGAAGTCTTGTCTATTGTTGACCCATTGCACTGGGCTGGCTAGGGTCCACTGCACACCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
||
3UTR CCA 72 bp | CTTTGGTGTCCTCCGCTAGGACATCTCACCGTATCCTaGCATCCCAGTGGAAGAGCTTTTCAAGCTACTTAC | + |
Preference number: 3 (lower is better) Translates to: LWCPPLGHLTVS*HPSGRAFQATY Trigger: GTAAGTAGCTTGAAAAGCTCTTCCACTGGGATGCCAGGATACGGTGAGATGTCCTAGCGGAGGACACCAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
||
3UTR CCA 72 bp | CGTGCACAACCTGGATTACTACAAGAAGACCACAAGTaGCCTGCTACCTGTGAAGTGGATGGAATCAGAGGC | + |
Preference number: 3 (lower is better) Translates to: RAQPGLLQEDHK*PATCEVDGIRG Trigger: GCCTCTGATTCCATCCACTTCACAGGTAGCAGGCCACTTGTGGTCTTCTTGTAGTAATCCAGGTTGTGCACG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
||
3UTR CCA 72 bp | AGAATGGTACAGAACTGGTGGTTTCCCACTGCATCCTaGTGGGCTCTCAGAGGCTTCAGTATGCATGTGACA | + |
Preference number: 3 (lower is better) Translates to: RMVQNWWFPTAS*WALRGFSMHVT Trigger: TGTCACATGCATACTGAAGCCTCTGAGAGCCCACCAGGATGCAGTGGGAAACCACCAGTTCTGTACCATTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
||
3UTR CCA 72 bp | GTAGCTAGGAGCATCGGCAGTTTTGAGCTACCTATGTaGGTGCTGGGAATCAAACGTGGTCCTCTGAAAGAG | + |
Preference number: 3 (lower is better) Translates to: VARSIGSFELPM*VLGIKRGPLKE Trigger: CTCTTTCAGAGGACCACGTTTGATTCCCAGCACCCACATAGGTAGCTCAAAACTGCCGATGCTCCTAGCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
||
3UTR-3UTR CAA 90 bp | TTCCAGGGCCTGAACCTAGCCAGTAGGAGCAGGTGGCCTTTGGCAGTGAGGACATTGAGTTTTTACAAGTaGTTTTGCTGCAGGCTTAAC | + |
Preference number: 3 (lower is better) Translates to: FQGLNLASRSRWPLAVRTLSFYK*FCCRLN Trigger: GTTAAGCCTGCAGCAAAACAACTTGTAAAAACTCAA...TGTCCTCACTGCCAAAGGCCACCTGCTCCTACTGGCTAGGTTCAGGCCCTGGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
||
3UTR GCA 72 bp | AAGGTCCTATTATGGCCAATGTTTCTGAACTTGAGCTaGCTGCTGACCCCAAGTAGGAACTATCCAGGACCC | + |
Preference number: 3 (lower is better) Translates to: KVLLWPMFLNLS*LLTPSRNYPGP Trigger: GGGTCCTGGATAGTTCCTACTTGGGGTCAGCAGGCAGCTCAAGTTCAGAAACATTGGCCATAATAGGACCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
||
3UTR GCA 72 bp | TGGAAAGAGAGGCCCATTGGTCTTGCAAACTTTTTATaGCTCAGTACAGGGGAATGCCAGGGCCAAGAAGTG | + |
Preference number: 3 (lower is better) Translates to: WKERPIGLANFL*LSTGECQGQEV Trigger: CACTTCTTGGCCCTGGCATTCCCCTGTACTGAGGCATAAAAAGTTTGCAAGACCAATGGGCCTCTCTTTCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
||
3UTR GCA 72 bp | GCAGGACAGCAAAGCAAACTGAAATTGAGTCCAACGTaGCACTTTCCCACATCTGGGTACTACTTCTGGGCA | + |
Preference number: 3 (lower is better) Translates to: AGQQSKLKLSPT*HFPTSGYYFWA Trigger: TGCCCAGAAGTAGTACCCAGATGTGGGAAAGTGGCACGTTGGACTCAATTTCAGTTTGCTTTGCTGTCCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
||
3UTR CCA 72 bp | AGGGAGCAAGATACTCCATGGGGCTCACTAGTAAACTaGCAAGAACAGGCTGAGAAGCAAGGGACTTTTCTG | + |
Preference number: 3 (lower is better) Translates to: REQDTPWGSLVN*QEQAEKQGTFL Trigger: CAGAAAAGTCCCTTGCTTCTCAGCCTGTTCTTGCCAGTTTACTAGTGAGCCCCATGGAGTATCTTGCTCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
||
3UTR CCA 72 bp | CGGATTGCTTGGTGTCTTCAGGAGAAGGTCCTATTATaGCCAATGTTTCTGAACTTGAGCTGCCTGCTGACC | + |
Preference number: 3 (lower is better) Translates to: RIAWCLQEKVLL*PMFLNLSCLLT Trigger: GGTCAGCAGGCAGCTCAAGTTCAGAAACATTGGCCATAATAGGACCTTCTCCTGAAGACACCAAGCAATCCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
||
3UTR TCA 72 bp | GCTGCTTTGGACAGACTGTCATGGCAGAAGATACTGTaGAGATGCTGTTGGACCTGGTATCTGAGATGGAGA | + |
Preference number: 3 (lower is better) Translates to: AALDRLSWQKIL*RCCWTWYLRWR Trigger: TCTCCATCTCAGATACCAGGTCCAACAGCATCTTCACAGTATCTTCTGCCATGACAGTCTGTCCAAAGCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
||
3UTR GCA 72 bp | GATCCCATTACAGATGGTTGTGAGCCACCATGTAGTTaGTGGGAATTGAACTCAGGACCTCAAGAAGAGTCT | + |
Preference number: 3 (lower is better) Translates to: DPITDGCEPPCS*WELNSGPQEES Trigger: AGACTCTTCTTGAGGTCCTGAGTTCAATTCCCAGCAACTACATGGTGGCTCACAACCATCTGTAATGGGATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
||
3UTR CCA 72 bp | CAACTGACACTTGGTAAGACTGGGAGAAGGCTGCTTTaGACAGACTGTCATGGCAGAAGATACTGTGAAGAT | + |
Preference number: 3 (lower is better) Translates to: QLTLGKTGRRLL*TDCHGRRYCED Trigger: ATCTTCACAGTATCTTCTGCCATGACAGTCTGTCCAAAGCAGCCTTCTCCCAGTCTTACCAAGTGTCAGTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
||
3UTR CCA 72 bp | GGTGGCCTGGACATAAAATACAAGCTGTGTCTGCTGTaGTACAAGTTGAACAGAAGACAGTTACTGGGTGGA | + |
Preference number: 3 (lower is better) Translates to: GGLDIKYKLCLL*YKLNRRQLLGG Trigger: TCCACCCAGTAACTGTCTTCTGTTCAACTTGTACCACAGCAGACACAGCTTGTATTTTATGTCCAGGCCACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
||
3UTR-3UTR CAA 90 bp | AGGCATTACCACCTGAGAGGATGCAGAGAACAGCTTTACGACTATATCTTTAAACCAATGTTTCTGAACTaGAGCTGCCTGCTGACCCCA | + |
Preference number: 3 (lower is better) Translates to: RHYHLRGCREQLYDYIFKPMFLN*SCLLTP Trigger: TGGGGTCAGCAGGCAGCTCAAGTTCAGAAACATTGG...TTTAAAGATATAGTCGTAAAGCTGTTCTCTGCATCCTCTCAGGTGGTAATGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
||
3UTR GCA 72 bp | TCCTCTATGAACTTCAAATGTAGCCCTTATCCGGATTaGTTGGTGTCTTCAGGAGAAGGTCCTATTATGGCC | + |
Preference number: 3 (lower is better) Translates to: SSMNFKCSPYPD*LVSSGEGPIMA Trigger: GGCCATAATAGGACCTTCTCCTGAAGACACCAAGCAATCCGGATAAGGGCTACATTTGAAGTTCATAGAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
||
3UTR CCA 72 bp | ACTGGCAAGAACAGGCTGAGAAGCAAGGGACTTTTCTaGCATGGCAGTTTTGTTTGTACTGGACCTGTATAT | + |
Preference number: 3 (lower is better) Translates to: TGKNRLRSKGLF*HGSFVCTGPVY Trigger: ATATACAGGTCCAGTACAAACAAAACTGCCATGCCAGAAAAGTCCCTTGCTTCTCAGCCTGTTCTTGCCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
||
3UTR CCA 72 bp | AGAGCTTGTGTCTCTAGCTGCATATGTATCAGAAGATaGCCTAGTTGGCCATTATTGGAAAGAGAGGCCCAT | + |
Preference number: 3 (lower is better) Translates to: RACVSSCICIRR*PSWPLLEREAH Trigger: ATGGGCCTCTCTTTCCAATAATGGCCAACTAGGCCATCTTCTGATACATATGCAGCTAGAGACACAAGCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
||
3UTR CCA 72 bp | CAACTGAATGCTGGGTCTAAGTGCGTTTATTTCTGGTaGCCTGGACATAAAATACAAGCTGTGTCTGCTGTG | + |
Preference number: 3 (lower is better) Translates to: QLNAGSKCVYFW*PGHKIQAVSAV Trigger: CACAGCAGACACAGCTTGTATTTTATGTCCAGGCCACCAGAAATAAACGCACTTAGACCCAGCATTCAGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
||
3UTR TCA 72 bp | ACGATGACACCATTGCATACACTAGCAAGATTTTGCTaGAAGGACCCAGATATAGCTGTCTCTTGTGAGGCT | + |
Preference number: 3 (lower is better) Translates to: TMTPLHTLARFC*KDPDIAVSCEA Trigger: AGCCTCACAAGAGACAGCTATATCTGGGTCCTTTCAGCAAAATCTTGCTAGTGTATGCAATGGTGTCATCGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
||
3UTR CCA 72 bp | GCATATGTATCAGAAGATGGCCTAGTTGGCCATTATTaGAAAGAGAGGCCCATTGGTCTTGCAAACTTTTTA | + |
Preference number: 3 (lower is better) Translates to: AYVSEDGLVGHY*KERPIGLANFL Trigger: TAAAAAGTTTGCAAGACCAATGGGCCTCTCTTTCCAATAATGGCCAACTAGGCCATCTTCTGATACATATGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
||
3UTR TCA 72 bp | CCAAATGAAAACACTATCTGCCATATCAGCTCTTCTTaGCAACTGAATGCTGGGTCTAAGTGCGTTTATTTC | + |
Preference number: 3 (lower is better) Translates to: PNENTICHISSS*QLNAGSKCVYF Trigger: GAAATAAACGCACTTAGACCCAGCATTCAGTTGTCAAGAAGAGCTGATATGGCAGATAGTGTTTTCATTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
||
3UTR TCA 72 bp | ACACACACACACCACACAGAGTTGGAAGAATACAACTaGATAAAATCGGGATTACAGTTACAAAGTCAGCAT | + |
Preference number: 3 (lower is better) Translates to: THTHHTELEEYN*IKSGLQLQSQH Trigger: ATGCTGACTTTGTAACTGTAATCCCGATTTTATTCAGTTGTATTCTTCCAACTCTGTGTGGTGTGTGTGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR CCA 72 bp | CAAACCGGATCAGTAGAGGTAGATGATGAGCGTGACTaGAGAATTAGAAGTAAATGTCAGAAAGTCTTAAAT | + |
Preference number: 3 (lower is better) Translates to: QTGSVEVDDERD*RIRSKCQKVLN Trigger: ATTTAAGACTTTCTGACATTTACTTCTAATTCTCCAGTCACGCTCATCATCTACCTCTACTGATCCGGTTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS-3UTR CCA 90 bp | AGAGAGCGGCAGAGGTTCCAGGGCCTGAACCTAGCCAGTAGGAGCAGGTGGCCTATGGCGTGGAAGTGGTaGCTTCTCTCTGTCCCCACT | + |
Preference number: 4 (lower is better) Translates to: RERQRFQGLNLASRSRWPMAWKW*LLSVPT Trigger: AGTGGGGACAGAGAGAAGCCACCACTTCCACGCCAT...AGGCCACCTGCTCCTACTGGCTAGGTTCAGGCCCTGGAACCTCTGCCGCTCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS-3UTR CCA 90 bp | TTGGTGTCCTCCGCTAGGACATCTCACCGTATCCTGGCATCCCAGTGGAAGAGCTTTGTCCAGGCGGCCTaGGCGCAGAATGGCAGGGTC | + |
Preference number: 4 (lower is better) Translates to: LVSSARTSHRILASQWKSFVQAA*AQNGRV Trigger: GACCCTGCCATTCTGCGCCCAGGCCGCCTGGACAAA...GCTCTTCCACTGGGATGCCAGGATACGGTGAGATGTCCTAGCGGAGGACACCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR CAA 72 bp | TACAGGGACCATTGTAGAGAGTGGGCCTTGGCCTCTTaGGTGCCCCAAGCTGAGCTTGCAGGGAGGCTCTGC | + |
Preference number: 4 (lower is better) Translates to: YRDHCREWALAS*VPQAELAGRLC Trigger: GCAGAGCCTCCCTGCAAGCTCAGCTTGGGGCACCAAAGAGGCCAAGGCCCACTCTCTACAATGGTCCCTGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS-3UTR GCA 90 bp | TCTGTGGACCCTAACCCGCCCTGCTACTGCTGGTGTGCAGTGGACCCTAGCCAGGACCCGAGCTGTAGCTaGCACGTTATTCAGATCATC | + |
Preference number: 4 (lower is better) Translates to: SVDPNPPCYCWCAVDPSQDPSCS*HVIQII Trigger: GATGATCTGAATAACGTGGCAGCTACAGCTCGGGTC...CTGGCTAGGGTCCACTGCACACCAGCAGTAGCAGGGCGGGTTAGGGTCCACAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS-3UTR GCA 90 bp | AGAGAGCGGCAGAGGTTCCAGGGCCTGAACCTAGCCAGTAGGAGCAGGTGGCCTTCAATGCACAGTCCTTaGATCTGTTCCTCTGAGAGG | + |
Preference number: 4 (lower is better) Translates to: RERQRFQGLNLASRSRWPSMHSP*ICSSER Trigger: CCTCTCAGAGGAACAGATGCAAGGACTGTGCATTGA...AGGCCACCTGCTCCTACTGGCTAGGTTCAGGCCCTGGAACCTCTGCCGCTCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS-3UTR GCA 90 bp | TTTACTCCTCTTATTGGGCTTGGGTGGCTGTCCCTTGCCTGTCAGTCAGCAGGGTATGGCAACACGGTCTaGTGGGGGAGGCAAACCCAC | + |
Preference number: 4 (lower is better) Translates to: FTPLIGLGWLSLACQSAGYGNTV*WGRQTH Trigger: GTGGGTTTGCCTCCCCCAGCAGACCGTGTTGCCATA...CCCTGCTGACTGACAGGCAAGGGACAGCCACCCAAGCCCAATAAGAGGAGTAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS-3UTR CCA 90 bp | TTTACTCCTCTTATTGGGCTTGGGTGGCTGTCCCTTGCCTGTCAGTCAGCAGGGGCAATGGCGTGGAAGTaGTGGCTTCTCTCTGTCCCC | + |
Preference number: 4 (lower is better) Translates to: FTPLIGLGWLSLACQSAGAMAWK*WLLSVP Trigger: GGGGACAGAGAGAAGCCACCACTTCCACGCCATTGC...CCCTGCTGACTGACAGGCAAGGGACAGCCACCCAAGCCCAATAAGAGGAGTAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS-3UTR CCA 90 bp | AGAGAGCGGCAGAGGTTCCAGGGCCTGAACCTAGCCAGTAGGAGCAGGTGGCCTTCCGGACACAATCTCTaGAGCAGCCACTTTCAGAAT | + |
Preference number: 4 (lower is better) Translates to: RERQRFQGLNLASRSRWPSGHNL*SSHFQN Trigger: ATTCTGAAAGTGGCTGCTCCAGAGATTGTGTCCGGA...AGGCCACCTGCTCCTACTGGCTAGGTTCAGGCCCTGGAACCTCTGCCGCTCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR CAA 72 bp | CGTGAGTCTGGCCTCTGCCAGGCTGGACATAGCCCCTaGGCGCATGAGCAGCTAGCTCTCCTAGTTAGTAAT | + |
Preference number: 4 (lower is better) Translates to: RESGLCQAGHSP*AHEQLALLVSN Trigger: ATTACTAACTAGGAGAGCTAGCTGCTCATGCGCCAAGGGGCTATGTCCAGCCTGGCAGAGGCCAGACTCACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS-3UTR CCA 90 bp | TTTACTCCTCTTATTGGGCTTGGGTGGCTGTCCCTTGCCTGTCAGTCAGCAGGGCCCAGCCTTTCCTCCTaGTCTCCTTCAGAGGGCAAA | + |
Preference number: 4 (lower is better) Translates to: FTPLIGLGWLSLACQSAGPSLSS*SPSEGK Trigger: TTTGCCCTCTGAAGGAGACCAGGAGGAAAGGCTGGG...CCCTGCTGACTGACAGGCAAGGGACAGCCACCCAAGCCCAATAAGAGGAGTAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS-3UTR CCA 90 bp | TTCCAGGGCCTGAACCTAGCCAGTAGGAGCAGGTGGCCTTTGGCAGTGAGGACACAAAGCCTTCCCTTTTaGCAGAAGGCTGGACTTCTG | + |
Preference number: 4 (lower is better) Translates to: FQGLNLASRSRWPLAVRTQSLPF*QKAGLL Trigger: CAGAAGTCCAGCCTTCTGCCAAAAGGGAAGGCTTTG...TGTCCTCACTGCCAAAGGCCACCTGCTCCTACTGGCTAGGTTCAGGCCCTGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR CAA 72 bp | GTCTTCAGACACACCAGAAGAGGGCAACAGATCCCATaGCAGAAGGTTGGGAGCCACCATGTGGTTGCTGGG | + |
Preference number: 4 (lower is better) Translates to: VFRHTRRGQQIP*QKVGSHHVVAG Trigger: CCCAGCAACCACATGGTGGCTCCCAACCTTCTGCAATGGGATCTGTTGCCCTCTTCTGGTGTGTCTGAAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS-3UTR TCA 90 bp | TTGGTGTCCTCCGCTAGGACATCTCACCGTATCCTGGCATCCCAGTGGAAGAGCTTGCATCTGTTCCTCTaGGAGGGGATCTTGGTCTCT | + |
Preference number: 4 (lower is better) Translates to: LVSSARTSHRILASQWKSLHLFL*EGILVS Trigger: AGAGACCAAGATCCCCTCTCAGAGGAACAGATGCAA...GCTCTTCCACTGGGATGCCAGGATACGGTGAGATGTCCTAGCGGAGGACACCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS-3UTR GCA 90 bp | GCTACTGCTGGTGTGCAGTGGACCCTAGCCAGCCCAGTGCAATGGGTCAACAATTCGGTCAAACCTTCCTaGACGTCTCAAAGCAGGATC | + |
Preference number: 4 (lower is better) Translates to: ATAGVQWTLASPVQWVNNSVKPS*TSQSRI Trigger: GATCCTGCTTTGAGACGTGCAGGAAGGTTTGACCGA...ATTGTTGACCCATTGCACTGGGCTGGCTAGGGTCCACTGCACACCAGCAGTAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS-3UTR GCA 90 bp | AGAGAGCGGCAGAGGTTCCAGGGCCTGAACCTAGCCAGTAGGAGCAGGTGGCCTAACCCCAACAGCCTTTaGAATTCATCCTGTGTTTCA | + |
Preference number: 4 (lower is better) Translates to: RERQRFQGLNLASRSRWPNPNSL*NSSCVS Trigger: TGAAACACAGGATGAATTGCAAAGGCTGTTGGGGTT...AGGCCACCTGCTCCTACTGGCTAGGTTCAGGCCCTGGAACCTCTGCCGCTCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS-3UTR CCA 90 bp | GCTACTGCTGGTGTGCAGTGGACCCTAGCCAGCCCAGTGCAATGGGTCAACAATGCAGGGAGCTGTTCATaGGATTTGCTGACTGTGGAT | + |
Preference number: 4 (lower is better) Translates to: ATAGVQWTLASPVQWVNNAGSCS*DLLTVD Trigger: ATCCACAGTCAGCAAATCCCATGAACAGCTCCCTGC...ATTGTTGACCCATTGCACTGGGCTGGCTAGGGTCCACTGCACACCAGCAGTAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS-3UTR CCA 90 bp | CCCACAAGTCCCACAGTCTGGGCTAAGAATGGTACAGAACTGGTGGTTTCCCACGGCAGGGGTCTTCAATaGCACGGAGCCCGTTTTAGA | + |
Preference number: 4 (lower is better) Translates to: PTSPTVWAKNGTELVVSHGRGLQ*HGARFR Trigger: TCTAAAACGGGCTCCGTGCCATTGAAGACCCCTGCC...GTGGGAAACCACCAGTTCTGTACCATTCTTAGCCCAGACTGTGGGACTTGTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS-3UTR CCA 90 bp | TCTGTGGACCCTAACCCGCCCTGCTACTGCTGGTGTGCAGTGGACCCTAGCCAGTTTCGGCACAACGTTTaGAGAATTCTTTCTCTGGCT | + |
Preference number: 4 (lower is better) Translates to: SVDPNPPCYCWCAVDPSQFRHNV*RILSLA Trigger: AGCCAGAGAAAGAATTCTCCAAACGTTGTGCCGAAA...CTGGCTAGGGTCCACTGCACACCAGCAGTAGCAGGGCGGGTTAGGGTCCACAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS-3UTR CCA 90 bp | TTGGTGTCCTCCGCTAGGACATCTCACCGTATCCTGGCATCCCAGTGGAAGAGCTCTGAGAGGGGATCTTaGTCTCTTAGCAACCCCAAC | + |
Preference number: 4 (lower is better) Translates to: LVSSARTSHRILASQWKSSERGS*SLSNPN Trigger: GTTGGGGTTGCTAAGAGACCAAGATCCCCTCTCAGA...GCTCTTCCACTGGGATGCCAGGATACGGTGAGATGTCCTAGCGGAGGACACCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS-3UTR CCA 90 bp | GCTACTGCTGGTGTGCAGTGGACCCTAGCCAGCCCAGTGCAATGGGTCAACAATAGTTCTGAACTGGTCTaGGTTGCGAACAGGTGCCAA | + |
Preference number: 4 (lower is better) Translates to: ATAGVQWTLASPVQWVNNSSELV*VANRCQ Trigger: TTGGCACCTGTTCGCAACCCAGACCAGTTCAGAACT...ATTGTTGACCCATTGCACTGGGCTGGCTAGGGTCCACTGCACACCAGCAGTAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR CAA 72 bp | TTTTTACTCCTCTTATTGGGCTTGGGTGGCTGTCCCTaGCCTGTCAGTCAGCAGGGTCAGGACAGTGGCTCA | + |
Preference number: 4 (lower is better) Translates to: FLLLLLGLGGCP*PVSQQGQDSGS Trigger: TGAGCCACTGTCCTGACCCTGCTGACTGACAGGCAAGGGACAGCCACCCAAGCCCAATAAGAGGAGTAAAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR CAA 72 bp | CTAGCAAACACAGAAGTGGATGCTCACAGTCAGCTATaGGATGGATCACAGGGCCCCCAATGGAGGAGCCAG | + |
Preference number: 4 (lower is better) Translates to: LANTEVDAHSQL*DGSQGPQWRSQ Trigger: CTGGCTCCTCCATTGGGGGCCCTGTGATCCATCCAATAGCTGACTGTGAGCATCCACTTCTGTGTTTGCTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS-3UTR TCA 90 bp | GCAGGGAGGCTCTGCTCTGTGTGGCAAGCCTCTCTCCTACATGGCACCTTATATCCAAACCAAGAGTTCTaGACTGGTCTGGGTTGCGAA | + |
Preference number: 4 (lower is better) Translates to: AGRLCSVWQASLLHGTLYPNQEF*TGLGCE Trigger: TTCGCAACCCAGACCAGTTCAGAACTCTTGGTTTGG...ATATAAGGTGCCATGTAGGAGAGAGGCTTGCCACACAGAGCAGAGCCTCCCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS-3UTR GCA 90 bp | TTCCAGGGCCTGAACCTAGCCAGTAGGAGCAGGTGGCCTTTGGCAGTGAGGACAGGCTTTTTCTTCTGCTaGGCCTGTTGTTTCATCAAG | + |
Preference number: 4 (lower is better) Translates to: FQGLNLASRSRWPLAVRTGFFFC*ACCFIK Trigger: CTTGATGAAACAACAGGCGCAGCAGAAGAAAAAGCC...TGTCCTCACTGCCAAAGGCCACCTGCTCCTACTGGCTAGGTTCAGGCCCTGGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS-3UTR CCA 90 bp | TTGGTGTCCTCCGCTAGGACATCTCACCGTATCCTGGCATCCCAGTGGAAGAGCGCATTTGACACAGCCTaGTCAAATAACTCACGGAGC | + |
Preference number: 4 (lower is better) Translates to: LVSSARTSHRILASQWKSAFDTA*SNNSRS Trigger: GCTCCGTGAGTTATTTGACCAGGCTGTGTCAAATGC...GCTCTTCCACTGGGATGCCAGGATACGGTGAGATGTCCTAGCGGAGGACACCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS-3UTR CCA 90 bp | GCAGGGAGGCTCTGCTCTGTGTGGCAAGCCTCTCTCCTACATGGCACCTTATATAGGGGGCTGAGTTCTTaGCTCGCTGAAAAACTTGTC | + |
Preference number: 4 (lower is better) Translates to: AGRLCSVWQASLLHGTLYRGLSS*LAEKLV Trigger: GACAAGTTTTTCAGCGAGCCAAGAACTCAGCCCCCT...ATATAAGGTGCCATGTAGGAGAGAGGCTTGCCACACAGAGCAGAGCCTCCCTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR CAA 72 bp | CATCAACTGACAAGTACTTGGACCTCTCCGTGCCATTaGAGCAGTCCTCTCCAGGTGGTTGGGACACTCCTA | + |
Preference number: 4 (lower is better) Translates to: HQLTSTWTSPCH*SSPLQVVGTLL Trigger: TAGGAGTGTCCCAACCACCTGGAGAGGACTGCTCAAATGGCACGGAGAGGTCCAAGTACTTGTCAGTTGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR CAA 72 bp | GACCGCATCCTCACTGTGACATCAACTGACAAGTACTaGGACCTCTCCGTGCCATTTGAGCAGTCCTCTCCA | + |
Preference number: 4 (lower is better) Translates to: DRILTVTSTDKY*DLSVPFEQSSP Trigger: TGGAGAGGACTGCTCAAATGGCACGGAGAGGTCCAAGTACTTGTCAGTTGATGTCACAGTGAGGATGCGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR CAA 72 bp | ACAGAGTCTTCACCCACCAGAGTGATGTCTGGTTCTTaGGTGTCCTCCGCTAGGACATCTCACCGTATCCTG | + |
Preference number: 4 (lower is better) Translates to: TESSPTRVMSGS*VSSARTSHRIL Trigger: CAGGATACGGTGAGATGTCCTAGCGGAGGACACCAAAGAACCAGACATCACTCTGGTGGGTGAAGACTCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS-3UTR GCA 90 bp | CCAGAGCTTGTGTCTCTAGCTGCATATGTATCAGAAGATGGCCTAGTTGGCCATGACCAGCTAGGAGGATaGCAGCTGGAGTCCCCAAAC | + |
Preference number: 4 (lower is better) Translates to: PELVSLAAYVSEDGLVGHDQLGG*QLESPN Trigger: GTTTGGGGACTCCAGCTGGCATCCTCCTAGCTGGTC...ATGGCCAACTAGGCCATCTTCTGATACATATGCAGCTAGAGACACAAGCTCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS-3UTR CCA 90 bp | AGAGGGCAACAGATCCCATTGCAGAAGGTTGGGAGCCACCATGTGGTTGCTGGGATGCAGGTTAGAAGCTaGGCTACAATTCTTCGTTCC | + |
Preference number: 4 (lower is better) Translates to: RGQQIPLQKVGSHHVVAGMQVRS*ATILRS Trigger: GGAACGAAGAATTGTAGCCCAGCTTCTAACCTGCAT...CCCAGCAACCACATGGTGGCTCCCAACCTTCTGCAATGGGATCTGTTGCCCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS-3UTR CCA 90 bp | TTTACTCCTCTTATTGGGCTTGGGTGGCTGTCCCTTGCCTGTCAGTCAGCAGGGGGAGAATTCTTTCTCTaGCTGCCTCATCTGGGATAC | + |
Preference number: 4 (lower is better) Translates to: FTPLIGLGWLSLACQSAGGEFFL*LPHLGY Trigger: GTATCCCAGATGAGGCAGCCAGAGAAAGAATTCTCC...CCCTGCTGACTGACAGGCAAGGGACAGCCACCCAAGCCCAATAAGAGGAGTAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS-3UTR TCA 90 bp | GCAGGGAGGCTCTGCTCTGTGTGGCAAGCCTCTCTCCTACATGGCACCTTATATATCTCTGTAAGCAGCTaGTTCACCACACGAACACTA | + |
Preference number: 4 (lower is better) Translates to: AGRLCSVWQASLLHGTLYISVSS*FTTRTL Trigger: TAGTGTTCGTGTGGTGAATCAGCTGCTTACAGAGAT...ATATAAGGTGCCATGTAGGAGAGAGGCTTGCCACACAGAGCAGAGCCTCCCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS-3UTR TCA 90 bp | TTGGTGTCCTCCGCTAGGACATCTCACCGTATCCTGGCATCCCAGTGGAAGAGCTCTTCAAAGTGCTTATaGCTGACCTTAAGCTCACCT | + |
Preference number: 4 (lower is better) Translates to: LVSSARTSHRILASQWKSSSKCL*LTLSSP Trigger: AGGTGAGCTTAAGGTCAGTCATAAGCACTTTGAAGA...GCTCTTCCACTGGGATGCCAGGATACGGTGAGATGTCCTAGCGGAGGACACCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS-3UTR TCA 90 bp | GGCCTAGCACATGGTTTATCAGCCCACACTAGCAGATGTGGTTTTACTAACACATATCACGCAGGGGGCTaGGTTCTTGGCTCGCTGAAA | + |
Preference number: 4 (lower is better) Translates to: GLAHGLSAHTSRCGFTNTYHAGG*VLGSLK Trigger: TTTCAGCGAGCCAAGAACTCAGCCCCCTGCGTGATA...TGTGTTAGTAAAACCACATCTGCTAGTGTGGGCTGATAAACCATGTGCTAGGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS-3UTR CCA 90 bp | TTCCAGGGCCTGAACCTAGCCAGTAGGAGCAGGTGGCCTTTGGCAGTGAGGACACTTCAAACTTCACATTaGAAATCTGCAACTCTGTAC | + |
Preference number: 4 (lower is better) Translates to: FQGLNLASRSRWPLAVRTLQTSH*KSATLY Trigger: GTACAGAGTTGCAGATTTCCAATGTGAAGTTTGAAG...TGTCCTCACTGCCAAAGGCCACCTGCTCCTACTGGCTAGGTTCAGGCCCTGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS-3UTR CCA 90 bp | CCCACAAGTCCCACAGTCTGGGCTAAGAATGGTACAGAACTGGTGGTTTCCCACTGGTATACCTCTGGATaGCGCATGTGTATGAGCATT | + |
Preference number: 4 (lower is better) Translates to: PTSPTVWAKNGTELVVSHWYTSG*RMCMSI Trigger: AATGCTCATACACATGCGCCATCCAGAGGTATACCA...GTGGGAAACCACCAGTTCTGTACCATTCTTAGCCCAGACTGTGGGACTTGTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS-3UTR GCA 90 bp | AGAGGGCAACAGATCCCATTGCAGAAGGTTGGGAGCCACCATGTGGTTGCTGGGAACAGGTGCCAATATTaGCATTATAAGCTCATCTCT | + |
Preference number: 4 (lower is better) Translates to: RGQQIPLQKVGSHHVVAGNRCQY*HYKLIS Trigger: AGAGATGAGCTTATAATGGCAATATTGGCACCTGTT...CCCAGCAACCACATGGTGGCTCCCAACCTTCTGCAATGGGATCTGTTGCCCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS-3UTR CCA 90 bp | GGCCTAGCACATGGTTTATCAGCCCACACTAGCAGATGTGGTTTTACTAACACAACGTCAGCAATGGCGTaGAAGTGGTGGCTTCTCTCT | + |
Preference number: 4 (lower is better) Translates to: GLAHGLSAHTSRCGFTNTTSAMA*KWWLLS Trigger: AGAGAGAAGCCACCACTTCCACGCCATTGCTGACGT...TGTGTTAGTAAAACCACATCTGCTAGTGTGGGCTGATAAACCATGTGCTAGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS-3UTR CCA 90 bp | CCCACAAGTCCCACAGTCTGGGCTAAGAATGGTACAGAACTGGTGGTTTCCCACCTGTACTCCTTGCTTTaGCTTTCTTTTGCAGAAGAG | + |
Preference number: 4 (lower is better) Translates to: PTSPTVWAKNGTELVVSHLYSLL*LSFAEE Trigger: CTCTTCTGCAAAAGAAAGCCAAAGCAAGGAGTACAG...GTGGGAAACCACCAGTTCTGTACCATTCTTAGCCCAGACTGTGGGACTTGTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS-3UTR CCA 90 bp | CCAGAGCTTGTGTCTCTAGCTGCATATGTATCAGAAGATGGCCTAGTTGGCCATCCAAGAGTTCTGAACTaGTCTGGGTTGCGAACAGGT | + |
Preference number: 4 (lower is better) Translates to: PELVSLAAYVSEDGLVGHPRVLN*SGLRTG Trigger: ACCTGTTCGCAACCCAGACCAGTTCAGAACTCTTGG...ATGGCCAACTAGGCCATCTTCTGATACATATGCAGCTAGAGACACAAGCTCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS-3UTR CCA 90 bp | TTTACTCCTCTTATTGGGCTTGGGTGGCTGTCCCTTGCCTGTCAGTCAGCAGGGTACATCTTCATCCAGTaGAGGTTTGGTGCCATTTTT | + |
Preference number: 4 (lower is better) Translates to: FTPLIGLGWLSLACQSAGYIFIQ*RFGAIF Trigger: AAAAATGGCACCAAACCTCCACTGGATGAAGATGTA...CCCTGCTGACTGACAGGCAAGGGACAGCCACCCAAGCCCAATAAGAGGAGTAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR CAA 72 bp | TTCTGTGCCTACCAGGTAACATGGAGCACAGAATACTaGGCTTCCCAGAAGTGTATTCAGAGACTTGGCTGC | + |
Preference number: 4 (lower is better) Translates to: FCAYQVTWSTEY*ASQKCIQRLGC Trigger: GCAGCCAAGTCTCTGAATACACTTCTGGGAAGCCAAGTATTCTGTGCTCCATGTTACCTGGTAGGCACAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR CAA 72 bp | CAGGAGAAGGTCCTATTATGGCCAATGTTTCTGAACTaGAGCTGCCTGCTGACCCCAAGTAGGAACTATCCA | + |
Preference number: 4 (lower is better) Translates to: QEKVLLWPMFLN*SCLLTPSRNYP Trigger: TGGATAGTTCCTACTTGGGGTCAGCAGGCAGCTCAAGTTCAGAAACATTGGCCATAATAGGACCTTCTCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS-3UTR TCA 90 bp | TTTACTCCTCTTATTGGGCTTGGGTGGCTGTCCCTTGCCTGTCAGTCAGCAGGGATGGTTTTACTTTCTTaGAAGCGTCTTCAAAGTGCT | + |
Preference number: 4 (lower is better) Translates to: FTPLIGLGWLSLACQSAGMVLLS*KRLQSA Trigger: AGCACTTTGAAGACGCTTTCAAGAAAGTAAAACCAT...CCCTGCTGACTGACAGGCAAGGGACAGCCACCCAAGCCCAATAAGAGGAGTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS-3UTR TCA 90 bp | GGCCTAGCACATGGTTTATCAGCCCACACTAGCAGATGTGGTTTTACTAACACAGAGTTCTTGGCTCGCTaGAAAACTTGTCGAACAGCA | + |
Preference number: 4 (lower is better) Translates to: GLAHGLSAHTSRCGFTNTEFLAR*KTCRTA Trigger: TGCTGTTCGACAAGTTTTTCAGCGAGCCAAGAACTC...TGTGTTAGTAAAACCACATCTGCTAGTGTGGGCTGATAAACCATGTGCTAGGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS-3UTR GCA 90 bp | GGCCTAGCACATGGTTTATCAGCCCACACTAGCAGATGTGGTTTTACTAACACAGACCTTAAGCTCACCTaGTCCAACACCATTCTTCTG | + |
Preference number: 4 (lower is better) Translates to: GLAHGLSAHTSRCGFTNTDLKLT*SNTILL Trigger: CAGAAGAATGGTGTTGGAGCAGGTGAGCTTAAGGTC...TGTGTTAGTAAAACCACATCTGCTAGTGTGGGCTGATAAACCATGTGCTAGGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS-3UTR CCA 90 bp | ATTTCTGGTGGCCTGGACATAAAATACAAGCTGTGTCTGCTGTGGTACAAGTTGGTGCTGGTATACCTCTaGATGGCGCATGTGTATGAG | + |
Preference number: 4 (lower is better) Translates to: ISGGLDIKYKLCLLWYKLVLVYL*MAHVYE Trigger: CTCATACACATGCGCCATCCAGAGGTATACCAGCAC...CAACTTGTACCACAGCAGACACAGCTTGTATTTTATGTCCAGGCCACCAGAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR CAA 72 bp | CTTGTGAAGGGCACAGGTGAGCCAGTCATGAAAACCTaGGTTAAGAAACATTCCCAACCAAGATGCCAACAG | + |
Preference number: 4 (lower is better) Translates to: LVKGTGEPVMKT*VKKHSQPRCQQ Trigger: CTGTTGGCATCTTGGTTGGGAATGTTTCTTAACCAAGGTTTTCATGACTGGCTCACCTGTGCCCTTCACAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR CAA 72 bp | GTAAGATCATTGGCAGGACAGCAAAGCAAACTGAAATaGAGTCCAACGTGCCACTTTCCCACATCTGGGTAC | + |
Preference number: 4 (lower is better) Translates to: VRSLAGQQSKLK*SPTCHFPTSGY Trigger: GTACCCAGATGTGGGAAAGTGGCACGTTGGACTCAATTTCAGTTTGCTTTGCTGTCCTGCCAATGATCTTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS-3UTR GCA 90 bp | CCAGAGCTTGTGTCTCTAGCTGCATATGTATCAGAAGATGGCCTAGTTGGCCATCAACTCTGTACTCCTTaGTTTGGCTTTCTTTTGCAG | + |
Preference number: 4 (lower is better) Translates to: PELVSLAAYVSEDGLVGHQLCTP*FGFLLQ Trigger: CTGCAAAAGAAAGCCAAAGCAAGGAGTACAGAGTTG...ATGGCCAACTAGGCCATCTTCTGATACATATGCAGCTAGAGACACAAGCTCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS-3UTR CCA 90 bp | GACTGGAGAATTAGAAGTAAATGTCAGAAAGTCTTAAATAGTGAATCTGAGCAGCTTCCCACAGCCTGGTaGTCCATGCAGGAGAACTCC | + |
Preference number: 4 (lower is better) Translates to: DWRIRSKCQKVLNSESEQLPTAW*SMQENS Trigger: GGAGTTCTCCTGCATGGACCACCAGGCTGTGGGAAG...CTGCTCAGATTCACTATTTAAGACTTTCTGACATTTACTTCTAATTCTCCAGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS-3UTR CCA 90 bp | GACTTTTCTGGCATGGCAGTTTTGTTTGTACTGGACCTGTATATTTGTAAAGCTCCTGTGTTTCAGAAGTaGGCTCAGCTCCCAGCCTTT | + |
Preference number: 4 (lower is better) Translates to: DFSGMAVLFVLDLYICKAPVFQK*AQLPAF Trigger: AAAGGCTGGGAGCTGAGCCCACTTCTGAAACACAGG...AGCTTTACAAATATACAGGTCCAGTACAAACAAAACTGCCATGCCAGAAAAGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS-3UTR GCA 90 bp | ATTTCTGGTGGCCTGGACATAAAATACAAGCTGTGTCTGCTGTGGTACAAGTTGCTCTTCATCTTGTCTTaGTCTTTTTGCCAGATGTCC | + |
Preference number: 4 (lower is better) Translates to: ISGGLDIKYKLCLLWYKLLFILS*SFCQMS Trigger: GGACATCTGGCAAAAAGAGCAAGACAAGATGAAGAG...CAACTTGTACCACAGCAGACACAGCTTGTATTTTATGTCCAGGCCACCAGAAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS-3UTR GCA 90 bp | ATTTCTGGTGGCCTGGACATAAAATACAAGCTGTGTCTGCTGTGGTACAAGTTGTATTCAGATCATCCATaGAGGTTAGAAGCTGGGCTA | + |
Preference number: 4 (lower is better) Translates to: ISGGLDIKYKLCLLWYKLYSDHP*RLEAGL Trigger: TAGCCCAGCTTCTAACCTGCATGGATGATCTGAATA...CAACTTGTACCACAGCAGACACAGCTTGTATTTTATGTCCAGGCCACCAGAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR CAA 72 bp | TCTATGAACTTCAAATGTAGCCCTTATCCGGATTGCTaGGTGTCTTCAGGAGAAGGTCCTATTATGGCCAAT | + |
Preference number: 4 (lower is better) Translates to: SMNFKCSPYPDC*VSSGEGPIMAN Trigger: ATTGGCCATAATAGGACCTTCTCCTGAAGACACCAAGCAATCCGGATAAGGGCTACATTTGAAGTTCATAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS-3UTR GCA 90 bp | CCAGAGCTTGTGTCTCTAGCTGCATATGTATCAGAAGATGGCCTAGTTGGCCATTTAATGTTGCATCATTaGCTCCAACATCTTCAAACT | + |
Preference number: 4 (lower is better) Translates to: PELVSLAAYVSEDGLVGHLMLHH*LQHLQT Trigger: AGTTTGAAGATGTTGGAGGCAATGATGCAACATTAA...ATGGCCAACTAGGCCATCTTCTGATACATATGCAGCTAGAGACACAAGCTCTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS-3UTR GCA 90 bp | GACTTTTCTGGCATGGCAGTTTTGTTTGTACTGGACCTGTATATTTGTAAAGCTAACTCACGGAGCTTCTaGTCAGACTCTCCAGAAACT | + |
Preference number: 4 (lower is better) Translates to: DFSGMAVLFVLDLYICKANSRSF*SDSPET Trigger: AGTTTCTGGAGAGTCTGAGCAGAAGCTCCGTGAGTT...AGCTTTACAAATATACAGGTCCAGTACAAACAAAACTGCCATGCCAGAAAAGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS-3UTR GCA 90 bp | GGCCTAGCACATGGTTTATCAGCCCACACTAGCAGATGTGGTTTTACTAACACAAATCGTTCAATTCAATaGACAGTCCTTGCATCTGTT | + |
Preference number: 4 (lower is better) Translates to: GLAHGLSAHTSRCGFTNTNRSIQ*TVLASV Trigger: AACAGATGCAAGGACTGTGCATTGAATTGAACGATT...TGTGTTAGTAAAACCACATCTGCTAGTGTGGGCTGATAAACCATGTGCTAGGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR CAA 72 bp | TGCATATGTATCAGAAGATGGCCTAGTTGGCCATTATaGGAAAGAGAGGCCCATTGGTCTTGCAAACTTTTT | + |
Preference number: 4 (lower is better) Translates to: CICIRRWPSWPL*EREAHWSCKLF Trigger: AAAAAGTTTGCAAGACCAATGGGCCTCTCTTTCCAATAATGGCCAACTAGGCCATCTTCTGATACATATGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR CAA 72 bp | AGTGCTAATCTAGGAGCTTCCCAGCCTCTGCTCCTCTaGTTAGTATTAGCAAACTCGCAATCTATATTTCTA | + |
Preference number: 4 (lower is better) Translates to: SANLGASQPLLL*LVLANSQSIFL Trigger: TAGAAATATAGATTGCGAGTTTGCTAATACTAACAAGAGGAGCAGAGGCTGGGAAGCTCCTAGATTAGCACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS-3UTR GCA 90 bp | AGGCATTACCACCTGAGAGGATGCAGAGAACAGCTTTACGACTATATCTTTAAAGTTTCCTTTGCCCTTTaGCCTACCTTTCCTTTTCTT | + |
Preference number: 4 (lower is better) Translates to: RHYHLRGCREQLYDYIFKVSFAL*PTFPFL Trigger: AAGAAAAGGAAAGGTAGGGCAAAGGGCAAAGGAAAC...TTTAAAGATATAGTCGTAAAGCTGTTCTCTGCATCCTCTCAGGTGGTAATGCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS-3UTR CCA 90 bp | ATTTCTGGTGGCCTGGACATAAAATACAAGCTGTGTCTGCTGTGGTACAAGTTGAAAATAAAAACTTGCTaGCGTGTTTCTAAGCCATCC | + |
Preference number: 4 (lower is better) Translates to: ISGGLDIKYKLCLLWYKLKIKTC*RVSKPS Trigger: GGATGGCTTAGAAACACGCCAGCAAGTTTTTATTTT...CAACTTGTACCACAGCAGACACAGCTTGTATTTTATGTCCAGGCCACCAGAAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS-3UTR GCA 90 bp | GACTGGAGAATTAGAAGTAAATGTCAGAAAGTCTTAAATAGTGAATCTGAGCAGAATTCTTTCTCTGGCTaGCTCATCTGGGATACCCAA | + |
Preference number: 4 (lower is better) Translates to: DWRIRSKCQKVLNSESEQNSFSG*LIWDTQ Trigger: TTGGGTATCCCAGATGAGGCAGCCAGAGAAAGAATT...CTGCTCAGATTCACTATTTAAGACTTTCTGACATTTACTTCTAATTCTCCAGTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS-3UTR CCA 90 bp | GACTGGAGAATTAGAAGTAAATGTCAGAAAGTCTTAAATAGTGAATCTGAGCAGAGGGTCAATGATATCTaGTCTATTGGTGGCAGCCAA | + |
Preference number: 4 (lower is better) Translates to: DWRIRSKCQKVLNSESEQRVNDI*SIGGSQ Trigger: TTGGCTGCCACCAATAGACCAGATATCATTGACCCT...CTGCTCAGATTCACTATTTAAGACTTTCTGACATTTACTTCTAATTCTCCAGTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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3UTR CAA 72 bp | GAGAAGCAAGGGACTTTTCTGGCATGGCAGTTTTGTTaGTACTGGACCTGTATATTTGTAAAGCTATATTTA | + |
Preference number: 4 (lower is better) Translates to: EKQGTFLAWQFC*YWTCIFVKLYL Trigger: TAAATATAGCTTTACAAATATACAGGTCCAGTACAAACAAAACTGCCATGCCAGAAAAGTCCCTTGCTTCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS GCA 90 bp | GGTGGTCCATGCAGGAGAACTCCACGAGGGGGCACGACACCAAGGTaGTGGTATACCTCTGGATGGCGCATGTGTATGAGCATTTTGCAG | + |
Preference number: 5 (lower is better) Translates to: GGPCRRTPRGGTTPR*WYTSGWRMCMSILQ Trigger: CTGCAAAATGCTCATACACATGCGCCATCCAGAGGTATACCAGCACCTTGGTGTCGTGCCCCCTCGTGGAGTTCTCCTGCATGGACCACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS CCA 90 bp | GGTCCATGCAGGAGAACTCCACGAGGGGGCACGACACCAAGGTGCTaGTATACCTCTGGATGGCGCATGTGTATGAGCATTTTGCAGACT | + |
Preference number: 5 (lower is better) Translates to: GPCRRTPRGGTTPRC*YTSGWRMCMSILQT Trigger: AGTCTGCAAAATGCTCATACACATGCGCCATCCAGAGGTATACCAGCACCTTGGTGTCGTGCCCCCTCGTGGAGTTCTCCTGCATGGACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS-3UTR CAA 90 bp | TTCCAGGGCCTGAACCTAGCCAGTAGGAGCAGGTGGCCTTTGGCAGTGAGGACAAGCTGTTCATGGGATTaGCTGACTGTGGATCTGGGT | + |
Preference number: 5 (lower is better) Translates to: FQGLNLASRSRWPLAVRTSCSWD*LTVDLG Trigger: ACCCAGATCCACAGTCAGCAAATCCCATGAACAGCT...TGTCCTCACTGCCAAAGGCCACCTGCTCCTACTGGCTAGGTTCAGGCCCTGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS-3UTR CAA 90 bp | AGAGAGCGGCAGAGGTTCCAGGGCCTGAACCTAGCCAGTAGGAGCAGGTGGCCTTGTTTCCTTTGCCCTTaGCCCTACCTTTCCTTTTCT | + |
Preference number: 5 (lower is better) Translates to: RERQRFQGLNLASRSRWPCFLCP*PYLSFS Trigger: AGAAAAGGAAAGGTAGGGCAAAGGGCAAAGGAAACA...AGGCCACCTGCTCCTACTGGCTAGGTTCAGGCCCTGGAACCTCTGCCGCTCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS-3UTR CAA 90 bp | AGAGGGCAACAGATCCCATTGCAGAAGGTTGGGAGCCACCATGTGGTTGCTGGGCAAGTTCCCCTGCTATaGCGTGTGCAAGTAATGTCT | + |
Preference number: 5 (lower is better) Translates to: RGQQIPLQKVGSHHVVAGQVPLL*RVQVMS Trigger: AGACATTACTTGCACACGCAATAGCAGGGGAACTTG...CCCAGCAACCACATGGTGGCTCCCAACCTTCTGCAATGGGATCTGTTGCCCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS-3UTR CAA 90 bp | TTGGTGTCCTCCGCTAGGACATCTCACCGTATCCTGGCATCCCAGTGGAAGAGCTTAGTCCAGACTCATTaGCCACAGCCTTTGCTAGCA | + |
Preference number: 5 (lower is better) Translates to: LVSSARTSHRILASQWKSLVQTH*PQPLLA Trigger: TGCTAGCAAAGGCTGTGGCAAATGAGTCTGGACTAA...GCTCTTCCACTGGGATGCCAGGATACGGTGAGATGTCCTAGCGGAGGACACCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS CCA 90 bp | ACGGAGCTTCTGCTCAGACTCTCCAGAAACTCCGGACACAATCTCTaGAGCAGCCACTTTCAGAATCGGCAAGTCAAGTTCCCCTGCTAT | + |
Preference number: 5 (lower is better) Translates to: TELLLRLSRNSGHNL*SSHFQNRQVKFPCY Trigger: ATAGCAGGGGAACTTGACTTGCCGATTCTGAAAGTGGCTGCTCCAGAGATTGTGTCCGGAGTTTCTGGAGAGTCTGAGCAGAAGCTCCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS-3UTR CAA 90 bp | GCAGGGAGGCTCTGCTCTGTGTGGCAAGCCTCTCTCCTACATGGCACCTTATATCAACCCCAACAGCCTTaGCAATTCATCCTGTGTTTC | + |
Preference number: 5 (lower is better) Translates to: AGRLCSVWQASLLHGTLYQPQQP*QFILCF Trigger: GAAACACAGGATGAATTGCAAAGGCTGTTGGGGTTG...ATATAAGGTGCCATGTAGGAGAGAGGCTTGCCACACAGAGCAGAGCCTCCCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS-3UTR CAA 90 bp | GCAGGGAGGCTCTGCTCTGTGTGGCAAGCCTCTCTCCTACATGGCACCTTATATCTGAGCTGTTATTTCTaGTCTCAGGGCACAGAGAGA | + |
Preference number: 5 (lower is better) Translates to: AGRLCSVWQASLLHGTLYLSCYF*SQGTER Trigger: TCTCTCTGTGCCCTGAGACAAGAAATAACAGCTCAG...ATATAAGGTGCCATGTAGGAGAGAGGCTTGCCACACAGAGCAGAGCCTCCCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS CCA 90 bp | GCTAGGAGGATGCCAGCTGGAGTCCCCAAACCAAGAGTTCTGAACTaGTCTGGGTTGCGAACAGGTGCCAATATTGCCATTATAAGCTCA | + |
Preference number: 5 (lower is better) Translates to: ARRMPAGVPKPRVLN*SGLRTGANIAIISS Trigger: TGAGCTTATAATGGCAATATTGGCACCTGTTCGCAACCCAGACCAGTTCAGAACTCTTGGTTTGGGGACTCCAGCTGGCATCCTCCTAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS-3UTR CAA 90 bp | TTCCAGGGCCTGAACCTAGCCAGTAGGAGCAGGTGGCCTTTGGCAGTGAGGACATGCTTTGGCTTTCTTTaGCAGAAGAGCTTCTATTTC | + |
Preference number: 5 (lower is better) Translates to: FQGLNLASRSRWPLAVRTCFGFL*QKSFYF Trigger: GAAATAGAAGCTCTTCTGCAAAAGAAAGCCAAAGCA...TGTCCTCACTGCCAAAGGCCACCTGCTCCTACTGGCTAGGTTCAGGCCCTGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS-3UTR CAA 90 bp | TTGGTGTCCTCCGCTAGGACATCTCACCGTATCCTGGCATCCCAGTGGAAGAGCTCTGTACTCCTTGCTTaGGCTTTCTTTTGCAGAAGA | + |
Preference number: 5 (lower is better) Translates to: LVSSARTSHRILASQWKSSVLLA*AFFCRR Trigger: TCTTCTGCAAAAGAAAGCCAAAGCAAGGAGTACAGA...GCTCTTCCACTGGGATGCCAGGATACGGTGAGATGTCCTAGCGGAGGACACCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS CCA 90 bp | GAGGATGCCAGCTGGAGTCCCCAAACCAAGAGTTCTGAACTGGTCTaGGTTGCGAACAGGTGCCAATATTGCCATTATAAGCTCATCTCT | + |
Preference number: 5 (lower is better) Translates to: EDASWSPQTKSSELV*VANRCQYCHYKLIS Trigger: AGAGATGAGCTTATAATGGCAATATTGGCACCTGTTCGCAACCCAGACCAGTTCAGAACTCTTGGTTTGGGGACTCCAGCTGGCATCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS-3UTR CAA 90 bp | GCAGGGAGGCTCTGCTCTGTGTGGCAAGCCTCTCTCCTACATGGCACCTTATATTTTCTTTTGTTTCCTTaGCCCTTTGCCCTACCTTTC | + |
Preference number: 5 (lower is better) Translates to: AGRLCSVWQASLLHGTLYFLLFP*PFALPF Trigger: GAAAGGTAGGGCAAAGGGCAAAGGAAACAAAAGAAA...ATATAAGGTGCCATGTAGGAGAGAGGCTTGCCACACAGAGCAGAGCCTCCCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS GCA 90 bp | TGGTCTCCTTCAGAGGGCAAACCTTCAATCTCAGGCTTTTTCTTCTaGTGCGCCTGTTGTTTCATCAAGACCCTATTGACCGCACACATG | + |
Preference number: 5 (lower is better) Translates to: WSPSEGKPSISGFFF*CACCFIKTLLTAHM Trigger: CATGTGTGCGGTCAATAGGGTCTTGATGAAACAACAGGCGCAGCAGAAGAAAAAGCCTGAGATTGAAGGTTTGCCCTCTGAAGGAGACCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS-3UTR CAA 90 bp | CCCACAAGTCCCACAGTCTGGGCTAAGAATGGTACAGAACTGGTGGTTTCCCACTCCTGCTTTTTAGAGTaGCTTTGGTCATCTGATAGG | + |
Preference number: 5 (lower is better) Translates to: PTSPTVWAKNGTELVVSHSCFLE*LWSSDR Trigger: CCTATCAGATGACCAAAGCAACTCTAAAAAGCAGGA...GTGGGAAACCACCAGTTCTGTACCATTCTTAGCCCAGACTGTGGGACTTGTGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS-3UTR CAA 90 bp | GCTACTGCTGGTGTGCAGTGGACCCTAGCCAGCCCAGTGCAATGGGTCAACAATTTTAATGTTGCATCATaGCCTCCAACATCTTCAAAC | + |
Preference number: 5 (lower is better) Translates to: ATAGVQWTLASPVQWVNNFNVAS*PPTSSN Trigger: GTTTGAAGATGTTGGAGGCAATGATGCAACATTAAA...ATTGTTGACCCATTGCACTGGGCTGGCTAGGGTCCACTGCACACCAGCAGTAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS-3UTR CAA 90 bp | CCAGAGCTTGTGTCTCTAGCTGCATATGTATCAGAAGATGGCCTAGTTGGCCATGGCTCGCTGAAAAACTaGTCGAACAGCACGTTCACT | + |
Preference number: 5 (lower is better) Translates to: PELVSLAAYVSEDGLVGHGSLKN*SNSTFT Trigger: AGTGAACGTGCTGTTCGACAAGTTTTTCAGCGAGCC...ATGGCCAACTAGGCCATCTTCTGATACATATGCAGCTAGAGACACAAGCTCTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS TCA 90 bp | ATTCCAGTGTCCACATATTTGCCACATCTGTTACTACTGAGGTACTaGATGACCCGCTGCTTCAGTTTCCTGTCTACGAAAACCCCGGGT | + |
Preference number: 5 (lower is better) Translates to: IPVSTYLPHLLLLRY*MTRCFSFLSTKTPG Trigger: ACCCGGGGTTTTCGTAGACAGGAAACTGAAGCAGCGGGTCATTCAGTACCTCAGTAGTAACAGATGTGGCAAATATGTGGACACTGGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS TCA 90 bp | AAAACTTGCTGGCGTGTTTCTAAGCCATCCATCTCTGTAAGCAGCTaGTTCACCACACGAACACTAGCACCTGTTTCTCGGTCTGATCTC | + |
Preference number: 5 (lower is better) Translates to: KTCWRVSKPSISVSS*FTTRTLAPVSRSDL Trigger: GAGATCAGACCGAGAAACAGGTGCTAGTGTTCGTGTGGTGAATCAGCTGCTTACAGAGATGGATGGCTTAGAAACACGCCAGCAAGTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS-3UTR CAA 90 bp | GGCCTAGCACATGGTTTATCAGCCCACACTAGCAGATGTGGTTTTACTAACACACTGAACTGGTCTGGGTaGCGAACAGGTGCCAATATT | + |
Preference number: 5 (lower is better) Translates to: GLAHGLSAHTSRCGFTNTLNWSG*RTGANI Trigger: AATATTGGCACCTGTTCGCAACCCAGACCAGTTCAG...TGTGTTAGTAAAACCACATCTGCTAGTGTGGGCTGATAAACCATGTGCTAGGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS-3UTR CAA 90 bp | GACTGGAGAATTAGAAGTAAATGTCAGAAAGTCTTAAATAGTGAATCTGAGCAGCCCACAAAGAGCGTTTaGTCCAGGCGGCCTGGGCGC | + |
Preference number: 5 (lower is better) Translates to: DWRIRSKCQKVLNSESEQPTKSV*SRRPGR Trigger: GCGCCCAGGCCGCCTGGACAAAACGCTCTTTGTGGG...CTGCTCAGATTCACTATTTAAGACTTTCTGACATTTACTTCTAATTCTCCAGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS TCA 90 bp | TCCTCTCCGATACAAAGAGAGCAGGGAGCTGTTCATGGGATTTGCTaGCTGTGGATCTGGGTAATCTTCCATGTTCGAATCATCATCAGA | + |
Preference number: 5 (lower is better) Translates to: SSPIQREQGAVHGIC*LWIWVIFHVRIIIR Trigger: TCTGATGATGATTCGAACATGGAAGATTACCCAGATCCACAGTCAGCAAATCCCATGAACAGCTCCCTGCTCTCTTTGTATCGGAGAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS GCA 90 bp | TCTGCTAGAGCAACAATGAAATCGTTCAATTCAATGCACAGTCCTTaGATCTGTTCCTCTGAGAGGGGATCTTGGTCTCTTAGCAACCCC | + |
Preference number: 5 (lower is better) Translates to: SARATMKSFNSMHSP*ICSSERGSWSLSNP Trigger: GGGGTTGCTAAGAGACCAAGATCCCCTCTCAGAGGAACAGATGCAAGGACTGTGCATTGAATTGAACGATTTCATTGTTGCTCTAGCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS GCA 90 bp | CTTGAAAGCGTCTTCAAAGTGCTTATGACTGACCTTAAGCTCACCTaGTCCAACACCATTCTTCTGAGCTGTTATTTCTTGTCTCAGGGC | + |
Preference number: 5 (lower is better) Translates to: LESVFKVLMTDLKLT*SNTILLSCYFLSQG Trigger: GCCCTGAGACAAGAAATAACAGCTCAGAAGAATGGTGTTGGAGCAGGTGAGCTTAAGGTCAGTCATAAGCACTTTGAAGACGCTTTCAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS CCA 90 bp | GTCACATTAGGGACAGTTACAAAGCCTTCCCTTTTGGCAGAAGGCTaGACTTCTGCTAGAGCAACAATGAAATCGTTCAATTCAATGCAC | + |
Preference number: 5 (lower is better) Translates to: VTLGTVTKPSLLAEG*TSARATMKSFNSMH Trigger: GTGCATTGAATTGAACGATTTCATTGTTGCTCTAGCAGAAGTCCAGCCTTCTGCCAAAAGGGAAGGCTTTGTAACTGTCCCTAATGTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS CCA 90 bp | GCTGTAGCTGCCACGTTATTCAGATCATCCATGCAGGTTAGAAGCTaGGCTACAATTCTTCGTTCCATATCTTTTGAAGCAACTTCTCTT | + |
Preference number: 5 (lower is better) Translates to: AVAATLFRSSMQVRS*ATILRSISFEATSL Trigger: AAGAGAAGTTGCTTCAAAAGATATGGAACGAAGAATTGTAGCCCAGCTTCTAACCTGCATGGATGATCTGAATAACGTGGCAGCTACAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS-3UTR CAA 90 bp | AGGCATTACCACCTGAGAGGATGCAGAGAACAGCTTTACGACTATATCTTTAAATTTCCACCGGGAGTTTaGTCAATAAACCATCCTCCC | + |
Preference number: 5 (lower is better) Translates to: RHYHLRGCREQLYDYIFKFPPGV*SINHPP Trigger: GGGAGGATGGTTTATTGACAAAACTCCCGGTGGAAA...TTTAAAGATATAGTCGTAAAGCTGTTCTCTGCATCCTCTCAGGTGGTAATGCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS-3UTR CAA 90 bp | GACTTTTCTGGCATGGCAGTTTTGTTTGTACTGGACCTGTATATTTGTAAAGCTCCTCTTCATCTTGTCTaGCTCTTTTTGCCAGATGTC | + |
Preference number: 5 (lower is better) Translates to: DFSGMAVLFVLDLYICKAPLHLV*LFLPDV Trigger: GACATCTGGCAAAAAGAGCAAGACAAGATGAAGAGG...AGCTTTACAAATATACAGGTCCAGTACAAACAAAACTGCCATGCCAGAAAAGTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS-3UTR CAA 90 bp | GACTTTTCTGGCATGGCAGTTTTGTTTGTACTGGACCTGTATATTTGTAAAGCTCTCATCCTCTTCATCTaGTCTTGCTCTTTTTGCCAG | + |
Preference number: 5 (lower is better) Translates to: DFSGMAVLFVLDLYICKALILFI*SCSFCQ Trigger: CTGGCAAAAAGAGCAAGACAAGATGAAGAGGATGAG...AGCTTTACAAATATACAGGTCCAGTACAAACAAAACTGCCATGCCAGAAAAGTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS-3UTR CAA 90 bp | GACTTTTCTGGCATGGCAGTTTTGTTTGTACTGGACCTGTATATTTGTAAAGCTTTTTCGGCACAACGTTaGGAGAATTCTTTCTCTGGC | + |
Preference number: 5 (lower is better) Translates to: DFSGMAVLFVLDLYICKAFSAQR*ENSFSG Trigger: GCCAGAGAAAGAATTCTCCAAACGTTGTGCCGAAAA...AGCTTTACAAATATACAGGTCCAGTACAAACAAAACTGCCATGCCAGAAAAGTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS-3UTR CAA 90 bp | ATTTCTGGTGGCCTGGACATAAAATACAAGCTGTGTCTGCTGTGGTACAAGTTGATGATATCTGGTCTATaGGTGGCAGCCAAAATAAAA | + |
Preference number: 5 (lower is better) Translates to: ISGGLDIKYKLCLLWYKLMISGL*VAAKIK Trigger: TTTTATTTTGGCTGCCACCAATAGACCAGATATCAT...CAACTTGTACCACAGCAGACACAGCTTGTATTTTATGTCCAGGCCACCAGAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS TCA 90 bp | ACTGAGGGACCTCTGCAGAGCTTCATACATCACTTGATCCTTTATTaGTATGGATGGTTTTACTTTCTTGAAAGCGTCTTCAAAGTGCTT | + |
Preference number: 5 (lower is better) Translates to: TEGPLQSFIHHLILY*YGWFYFLESVFKVL Trigger: AAGCACTTTGAAGACGCTTTCAAGAAAGTAAAACCATCCATATCAATAAAGGATCAAGTGATGTATGAAGCTCTGCAGAGGTCCCTCAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS CAA 72 bp | CGGTCTGCTGGGGGAGGCAAACCCACAAAGAGCGTTTaGTCCAGGCGGCCTGGGCGCAGAATGGCAGGGTCA | + |
Preference number: 6 (lower is better) Translates to: RSAGGGKPTKSV*SRRPGRRMAGS Trigger: TGACCCTGCCATTCTGCGCCCAGGCCGCCTGGACAAAACGCTCTTTGTGGGTTTGCCTCCCCCAGCAGACCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS CAA 90 bp | ATGGCAACACGGTCTGCTGGGGGAGGCAAACCCACAAAGAGCGTTTaGTCCAGGCGGCCTGGGCGCAGAATGGCAGGGTCAATGATATCT | + |
Preference number: 6 (lower is better) Translates to: MATRSAGGGKPTKSV*SRRPGRRMAGSMIS Trigger: AGATATCATTGACCCTGCCATTCTGCGCCCAGGCCGCCTGGACAAAACGCTCTTTGTGGGTTTGCCTCCCCCAGCAGACCGTGTTGCCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS GCA 72 bp | TGCAGGAGAACTCCACGAGGGGGCACGACACCAAGGTaGTGGTATACCTCTGGATGGCGCATGTGTATGAGC | + |
Preference number: 6 (lower is better) Translates to: CRRTPRGGTTPR*WYTSGWRMCMS Trigger: GCTCATACACATGCGCCATCCAGAGGTATACCAGCACCTTGGTGTCGTGCCCCCTCGTGGAGTTCTCCTGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS CCA 72 bp | CTTCAATGGCACGGAGCCCGTTTTAGACGTCAGCAATaGCGTGGAAGTGGTGGCTTCTCTCTGTCCCCACTT | + |
Preference number: 6 (lower is better) Translates to: LQWHGARFRRQQ*RGSGGFSLSPL Trigger: AAGTGGGGACAGAGAGAAGCCACCACTTCCACGCCATTGCTGACGTCTAAAACGGGCTCCGTGCCATTGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS CCA 72 bp | AGGAGAACTCCACGAGGGGGCACGACACCAAGGTGCTaGTATACCTCTGGATGGCGCATGTGTATGAGCATT | + |
Preference number: 6 (lower is better) Translates to: RRTPRGGTTPRC*YTSGWRMCMSI Trigger: AATGCTCATACACATGCGCCATCCAGAGGTATACCAGCACCTTGGTGTCGTGCCCCCTCGTGGAGTTCTCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS TCA 72 bp | GGAGGATGCCAGCTGGAGTCCCCAAACCAAGAGTTCTaGACTGGTCTGGGTTGCGAACAGGTGCCAATATTG | + |
Preference number: 6 (lower is better) Translates to: GGCQLESPNQEF*TGLGCEQVPIL Trigger: CAATATTGGCACCTGTTCGCAACCCAGACCAGTTCAGAACTCTTGGTTTGGGGACTCCAGCTGGCATCCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS TCA 72 bp | TCAGGGCACAGAGAGAAGCTTCCCGTACCAGAGCAGTaGGGTCCGCACCCGTATAGCAATTACAACGAAGGT | + |
Preference number: 6 (lower is better) Translates to: SGHREKLPVPEQ*GPHPYSNYNEG Trigger: ACCTTCGTTGTAATTGCTATACGGGTGCGGACCTCACTGCTCTGGTACGGGAAGCTTCTCTCTGTGCCCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS CCA 72 bp | ACGAGGGGGCACGACACCAAGGTGCTGGTATACCTCTaGATGGCGCATGTGTATGAGCATTTTGCAGACTTC | + |
Preference number: 6 (lower is better) Translates to: TRGHDTKVLVYL*MAHVYEHFADF Trigger: GAAGTCTGCAAAATGCTCATACACATGCGCCATCCAGAGGTATACCAGCACCTTGGTGTCGTGCCCCCTCGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS CCA 72 bp | TGGAAGTGGTGGCTTCTCTCTGTCCCCACTTCGGAGTaGTTGAAACAGACTCTGAGTTTCCTCTCCGATACA | + |
Preference number: 6 (lower is better) Translates to: WKWWLLSVPTSE*LKQTLSFLSDT Trigger: TGTATCGGAGAGGAAACTCAGAGTCTGTTTCAACCACTCCGAAGTGGGGACAGAGAGAAGCCACCACTTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS CCA 72 bp | CTGCTCAGACTCTCCAGAAACTCCGGACACAATCTCTaGAGCAGCCACTTTCAGAATCGGCAAGTCAAGTTC | + |
Preference number: 6 (lower is better) Translates to: LLRLSRNSGHNL*SSHFQNRQVKF Trigger: GAACTTGACTTGCCGATTCTGAAAGTGGCTGCTCCAGAGATTGTGTCCGGAGTTTCTGGAGAGTCTGAGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS CCA 72 bp | ATGCCAGCTGGAGTCCCCAAACCAAGAGTTCTGAACTaGTCTGGGTTGCGAACAGGTGCCAATATTGCCATT | + |
Preference number: 6 (lower is better) Translates to: MPAGVPKPRVLN*SGLRTGANIAI Trigger: AATGGCAATATTGGCACCTGTTCGCAACCCAGACCAGTTCAGAACTCTTGGTTTGGGGACTCCAGCTGGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS CAA 90 bp | CTTAAGCTCACCTGCTCCAACACCATTCTTCTGAGCTGTTATTTCTaGTCTCAGGGCACAGAGAGAAGCTTCCCGTACCAGAGCAGTGAG | + |
Preference number: 6 (lower is better) Translates to: LKLTCSNTILLSCYF*SQGTERSFPYQSSE Trigger: CTCACTGCTCTGGTACGGGAAGCTTCTCTCTGTGCCCTGAGACAAGAAATAACAGCTCAGAAGAATGGTGTTGGAGCAGGTGAGCTTAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS TCA 72 bp | TGGCGTGTTTCTAAGCCATCCATCTCTGTAAGCAGCTaGTTCACCACACGAACACTAGCACCTGTTTCTCGG | + |
Preference number: 6 (lower is better) Translates to: WRVSKPSISVSS*FTTRTLAPVSR Trigger: CCGAGAAACAGGTGCTAGTGTTCGTGTGGTGAATCAGCTGCTTACAGAGATGGATGGCTTAGAAACACGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS CCA 72 bp | CAACGTTTGGAGAATTCTTTCTCTGGCTGCCTCATCTaGGATACCCAAGCAGACTTCTCGGTCAAACCTTCC | + |
Preference number: 6 (lower is better) Translates to: QRLENSFSGCLI*DTQADFSVKPS Trigger: GGAAGGTTTGACCGAGAAGTCTGCTTGGGTATCCCAGATGAGGCAGCCAGAGAAAGAATTCTCCAAACGTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS CCA 72 bp | TTCCTCTCCGATACAAAGAGAGCAGGGAGCTGTTCATaGGATTTGCTGACTGTGGATCTGGGTAATCTTCCA | + |
Preference number: 6 (lower is better) Translates to: FLSDTKRAGSCS*DLLTVDLGNLP Trigger: TGGAAGATTACCCAGATCCACAGTCAGCAAATCCCATGAACAGCTCCCTGCTCTCTTTGTATCGGAGAGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS CCA 72 bp | AGCTGGAGTCCCCAAACCAAGAGTTCTGAACTGGTCTaGGTTGCGAACAGGTGCCAATATTGCCATTATAAG | + |
Preference number: 6 (lower is better) Translates to: SWSPQTKSSELV*VANRCQYCHYK Trigger: CTTATAATGGCAATATTGGCACCTGTTCGCAACCCAGACCAGTTCAGAACTCTTGGTTTGGGGACTCCAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS CAA 72 bp | TCCGATACAAAGAGAGCAGGGAGCTGTTCATGGGATTaGCTGACTGTGGATCTGGGTAATCTTCCATGTTCG | + |
Preference number: 6 (lower is better) Translates to: SDTKRAGSCSWD*LTVDLGNLPCS Trigger: CGAACATGGAAGATTACCCAGATCCACAGTCAGCAAATCCCATGAACAGCTCCCTGCTCTCTTTGTATCGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS CAA 72 bp | GGAGTCCCCAAACCAAGAGTTCTGAACTGGTCTGGGTaGCGAACAGGTGCCAATATTGCCATTATAAGCTCA | + |
Preference number: 6 (lower is better) Translates to: GVPKPRVLNWSG*RTGANIAIISS Trigger: TGAGCTTATAATGGCAATATTGGCACCTGTTCGCAACCCAGACCAGTTCAGAACTCTTGGTTTGGGGACTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS TCA 72 bp | CTGACCTTAAGCTCACCTGCTCCAACACCATTCTTCTaGGCTGTTATTTCTTGTCTCAGGGCACAGAGAGAA | + |
Preference number: 6 (lower is better) Translates to: LTLSSPAPTPFF*AVISCLRAQRE Trigger: TTCTCTCTGTGCCCTGAGACAAGAAATAACAGCTCAGAAGAATGGTGTTGGAGCAGGTGAGCTTAAGGTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS GCA 72 bp | TCAGAGGGCAAACCTTCAATCTCAGGCTTTTTCTTCTaGTGCGCCTGTTGTTTCATCAAGACCCTATTGACC | + |
Preference number: 6 (lower is better) Translates to: SEGKPSISGFFF*CACCFIKTLLT Trigger: GGTCAATAGGGTCTTGATGAAACAACAGGCGCAGCAGAAGAAAAAGCCTGAGATTGAAGGTTTGCCCTCTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS CAA 72 bp | TCCAAGGGAAGACTTTCTTTCTTTCCACCGGGAGTTTaGTCAATAAACCATCCTCCCTCAGATTCTCGGGCA | + |
Preference number: 6 (lower is better) Translates to: SKGRLSFFPPGV*SINHPPSDSRA Trigger: TGCCCGAGAATCTGAGGGAGGATGGTTTATTGACAAAACTCCCGGTGGAAAGAAAGAAAGTCTTCCCTTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS CAA 90 bp | AGTTTCCTCTCCGATACAAAGAGAGCAGGGAGCTGTTCATGGGATTaGCTGACTGTGGATCTGGGTAATCTTCCATGTTCGAATCATCAT | + |
Preference number: 6 (lower is better) Translates to: SFLSDTKRAGSCSWD*LTVDLGNLPCSNHH Trigger: ATGATGATTCGAACATGGAAGATTACCCAGATCCACAGTCAGCAAATCCCATGAACAGCTCCCTGCTCTCTTTGTATCGGAGAGGAAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS TCA 72 bp | ATACAAAGAGAGCAGGGAGCTGTTCATGGGATTTGCTaGCTGTGGATCTGGGTAATCTTCCATGTTCGAATC | + |
Preference number: 6 (lower is better) Translates to: IQREQGAVHGIC*LWIWVIFHVRI Trigger: GATTCGAACATGGAAGATTACCCAGATCCACAGTCAGCAAATCCCATGAACAGCTCCCTGCTCTCTTTGTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS CCA 72 bp | GGGACAGTTACAAAGCCTTCCCTTTTGGCAGAAGGCTaGACTTCTGCTAGAGCAACAATGAAATCGTTCAAT | + |
Preference number: 6 (lower is better) Translates to: GTVTKPSLLAEG*TSARATMKSFN Trigger: ATTGAACGATTTCATTGTTGCTCTAGCAGAAGTCCAGCCTTCTGCCAAAAGGGAAGGCTTTGTAACTGTCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS CCA 72 bp | TCTGGTCTATTGGTGGCAGCCAAAATAAAAACTTGCTaGCGTGTTTCTAAGCCATCCATCTCTGTAAGCAGC | + |
Preference number: 6 (lower is better) Translates to: SGLLVAAKIKTC*RVSKPSISVSS Trigger: GCTGCTTACAGAGATGGATGGCTTAGAAACACGCCAGCAAGTTTTTATTTTGGCTGCCACCAATAGACCAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS GCA 72 bp | GCAACAATGAAATCGTTCAATTCAATGCACAGTCCTTaGATCTGTTCCTCTGAGAGGGGATCTTGGTCTCTT | + |
Preference number: 6 (lower is better) Translates to: ATMKSFNSMHSP*ICSSERGSWSL Trigger: AAGAGACCAAGATCCCCTCTCAGAGGAACAGATGCAAGGACTGTGCATTGAATTGAACGATTTCATTGTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS GCA 72 bp | ATATCTGGTCTATTGGTGGCAGCCAAAATAAAAACTTaGTGGCGTGTTTCTAAGCCATCCATCTCTGTAAGC | + |
Preference number: 6 (lower is better) Translates to: ISGLLVAAKIKT*WRVSKPSISVS Trigger: GCTTACAGAGATGGATGGCTTAGAAACACGCCAGCAAGTTTTTATTTTGGCTGCCACCAATAGACCAGATAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS GCA 72 bp | GTCTTCAAAGTGCTTATGACTGACCTTAAGCTCACCTaGTCCAACACCATTCTTCTGAGCTGTTATTTCTTG | + |
Preference number: 6 (lower is better) Translates to: VFKVLMTDLKLT*SNTILLSCYFL Trigger: CAAGAAATAACAGCTCAGAAGAATGGTGTTGGAGCAGGTGAGCTTAAGGTCAGTCATAAGCACTTTGAAGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS CCA 72 bp | GCCACGTTATTCAGATCATCCATGCAGGTTAGAAGCTaGGCTACAATTCTTCGTTCCATATCTTTTGAAGCA | + |
Preference number: 6 (lower is better) Translates to: ATLFRSSMQVRS*ATILRSISFEA Trigger: TGCTTCAAAAGATATGGAACGAAGAATTGTAGCCCAGCTTCTAACCTGCATGGATGATCTGAATAACGTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS CAA 72 bp | TGGTATACCTCTGGATGGCGCATGTGTATGAGCATTTaGCAGACTTCTTTTAATGTTGCATCATTGCCTCCA | + |
Preference number: 6 (lower is better) Translates to: WYTSGWRMCMSI*QTSFNVASLPP Trigger: TGGAGGCAATGATGCAACATTAAAAGAAGTCTGCAAAATGCTCATACACATGCGCCATCCAGAGGTATACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS CAA 90 bp | TCTTTTAATGTTGCATCATTGCCTCCAACATCTTCAAACTTCACATaGGAAATCTGCAACTCTGTACTCCTTGCTTTGGCTTTCTTTTGC | + |
Preference number: 6 (lower is better) Translates to: SFNVASLPPTSSNFT*EICNSVLLALAFFC Trigger: GCAAAAGAAAGCCAAAGCAAGGAGTACAGAGTTGCAGATTTCCAATGTGAAGTTTGAAGATGTTGGAGGCAATGATGCAACATTAAAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |
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CDS CAA 72 bp | CAAACTTCACATTGGAAATCTGCAACTCTGTACTCCTaGCTTTGGCTTTCTTTTGCAGAAGAGCTTCTATTT | + |
Preference number: 6 (lower is better) Translates to: QTSHWKSATLYS*LWLSFAEELLF Trigger: AAATAGAAGCTCTTCTGCAAAAGAAAGCCAAAGCAAGGAGTACAGAGTTGCAGATTTCCAATGTGAAGTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027797.9 |