Pregenerated sensors for NUSAP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027306Ensembl transcript IDs: ENSMUST00000028771.8, ENSMUST00000068225.15
Found 163 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGAGGCTGGGGGATCAGGAGTTCAAGGTCATCTTCAGATACAAAATaGGTTTGGGACCAGTTTGCCCTACATGAGGCCCTGTCTCAACAG | + |
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Preference number: 1 (lower is better) Translates to: RGWGIRSSRSSSDTK*VWDQFALHEALSQQ Trigger: CTGTTGAGACAGGGCCTCATGTAGGGCAAACTGGTCCCAAACTCATTTTGTATCTGAAGATGACCTTGAACTCCTGATCCCCCAGCCTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
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| 3UTR TCA 90 bp | GCAGACAGTGAGCTTCTGCTCCTCCTGCCTCTACCTCCTGAGTACTaGACTATAGATTTATGCTACCACATTCAGCTTAGCTTTATTGAC | + |
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Preference number: 1 (lower is better) Translates to: ADSELLLLLPLPPEY*TIDLCYHIQLSFID Trigger: GTCAATAAAGCTAAGCTGAATGTGGTAGCATAAATCTATAGTTCAGTACTCAGGAGGTAGAGGCAGGAGGAGCAGAAGCTCACTGTCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028771.8 |
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| 3UTR CCA 90 bp | GTAACAAAGGGAAAAACAAAAACACTTCTTTATAGCCAGGTATGGTaGTATACATCTAACTCTGCACTCACCTGGGAGGTAGAGGCTGGG | + |
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Preference number: 1 (lower is better) Translates to: VTKGKTKTLLYSQVW*YTSNSALTWEVEAG Trigger: CCCAGCCTCTACCTCCCAGGTGAGTGCAGAGTTAGATGTATACCACCATACCTGGCTATAAAGAAGTGTTTTTGTTTTTCCCTTTGTTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
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| 3UTR TCA 90 bp | TCTCAACAGTTGTGGAAGACAAGTGGATGGAGGAGGTGTGTTTACTaGTCTCTGATGTCCATCCAAATCCTGAGCAACTTACGCTTAAAA | + |
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Preference number: 1 (lower is better) Translates to: SQQLWKTSGWRRCVY*SLMSIQILSNLRLK Trigger: TTTTAAGCGTAAGTTGCTCAGGATTTGGATGGACATCAGAGATCAGTAAACACACCTCCTCCATCCACTTGTCTTCCACAACTGTTGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
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| 3UTR CCA 90 bp | TCAGTAACAAAGGGAAAAACAAAAACACTTCTTTATAGCCAGGTATaGTGGTATACATCTAACTCTGCACTCACCTGGGAGGTAGAGGCT | + |
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Preference number: 1 (lower is better) Translates to: SVTKGKTKTLLYSQV*WYTSNSALTWEVEA Trigger: AGCCTCTACCTCCCAGGTGAGTGCAGAGTTAGATGTATACCACCATACCTGGCTATAAAGAAGTGTTTTTGTTTTTCCCTTTGTTACTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
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| 3UTR-3UTR GCA 90 bp | GTATGGTGGTATACATCTAACTCTGCACTCACCTGGGAGGTAGAGGCTGGGGGACAGAAGGTCACCCCTTaGAGCTTTCCTCTCTTTACT | + |
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Preference number: 2 (lower is better) Translates to: VWWYTSNSALTWEVEAGGQKVTP*SFPLFT Trigger: AGTAAAGAGAGGAAAGCTGCAAGGGGTGACCTTCTG...TCCCCCAGCCTCTACCTCCCAGGTGAGTGCAGAGTTAGATGTATACCACCATAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
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| 3UTR CAA 90 bp | GGAGTTCAAGGTCATCTTCAGATACAAAATGAGTTTGGGACCAGTTaGCCCTACATGAGGCCCTGTCTCAACAGTTGTGGAAGACAAGTG | + |
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Preference number: 2 (lower is better) Translates to: GVQGHLQIQNEFGTS*PYMRPCLNSCGRQV Trigger: CACTTGTCTTCCACAACTGTTGAGACAGGGCCTCATGTAGGGCAAACTGGTCCCAAACTCATTTTGTATCTGAAGATGACCTTGAACTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
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| 3UTR-3UTR GCA 90 bp | TTTGGTTTTGGTGGTACAGTTCAGGGACAGGAGTGTGATAGACAAGTGTTGTACTTGTGCAGAAAAGGGTaGAGGTCATCTCCCTCGGAA | + |
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Preference number: 2 (lower is better) Translates to: FGFGGTVQGQECDRQVLYLCRKG*RSSPSE Trigger: TTCCGAGGGAGATGACCTGCACCCTTTTCTGCACAA...GTACAACACTTGTCTATCACACTCCTGTCCCTGAACTGTACCACCAAAACCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
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| 3UTR-3UTR CCA 90 bp | GAGGATTTAAGTAAGCTTTCAACTACTACACCAGCAACATGCCACTGTGTGCCTCAGACCCTTAACCACTaGGCCATCATCCAGCCTTTT | + |
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Preference number: 2 (lower is better) Translates to: EDLSKLSTTTPATCHCVPQTLNH*AIIQPF Trigger: AAAAGGCTGGATGATGGCCCAGTGGTTAAGGGTCTG...AGGCACACAGTGGCATGTTGCTGGTGTAGTAGTTGAAAGCTTACTTAAATCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028771.8 |
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| 3UTR-3UTR TCA 90 bp | CCCTGTCTCAACAGTTGTGGAAGACAAGTGGATGGAGGAGGTGTGTTTACTGATGATTTTCCAGGCTACTaGACAAAAATGTGGTCTTCC | + |
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Preference number: 2 (lower is better) Translates to: PCLNSCGRQVDGGGVFTDDFPGY*TKMWSS Trigger: GGAAGACCACATTTTTGTTCAGTAGCCTGGAAAATC...ATCAGTAAACACACCTCCTCCATCCACTTGTCTTCCACAACTGTTGAGACAGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
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| 3UTR-3UTR GCA 90 bp | GTTCAAGGTCATCTTCAGATACAAAATGAGTTTGGGACCAGTTTGCCCTACATGTTCTGCTACAGCTTGTaGAGAAAAGGGTGCAGGTCA | + |
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Preference number: 2 (lower is better) Translates to: VQGHLQIQNEFGTSLPYMFCYSL*RKGCRS Trigger: TGACCTGCACCCTTTTCTGCACAAGCTGTAGCAGAA...CATGTAGGGCAAACTGGTCCCAAACTCATTTTGTATCTGAAGATGACCTTGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
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| 3UTR-3UTR CCA 90 bp | GTTCAAGGTCATCTTCAGATACAAAATGAGTTTGGGACCAGTTTGCCCTACATGCTGTCTCAACAGTTGTaGAAGACAAGTGGATGGAGG | + |
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Preference number: 2 (lower is better) Translates to: VQGHLQIQNEFGTSLPYMLSQQL*KTSGWR Trigger: CCTCCATCCACTTGTCTTCCACAACTGTTGAGACAG...CATGTAGGGCAAACTGGTCCCAAACTCATTTTGTATCTGAAGATGACCTTGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
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| 3UTR-3UTR TCA 90 bp | TTTGGTTTTGGTGGTACAGTTCAGGGACAGGAGTGTGATAGACAAGTGTTGTACCAGATGGCAAATACATaGAAAGTCAGAACAAGGCTC | + |
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Preference number: 2 (lower is better) Translates to: FGFGGTVQGQECDRQVLYQMANT*KVRTRL Trigger: GAGCCTTGTTCTGACTTTTCATGTATTTGCCATCTG...GTACAACACTTGTCTATCACACTCCTGTCCCTGAACTGTACCACCAAAACCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
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| 3UTR-3UTR TCA 90 bp | GAGGATTTAAGTAAGCTTTCAACTACTACACCAGCAACATGCCACTGTGTGCCTTCTTCAGATACAAAATaGGTTTGGGACCAGTTTGCC | + |
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Preference number: 2 (lower is better) Translates to: EDLSKLSTTTPATCHCVPSSDTK*VWDQFA Trigger: GGCAAACTGGTCCCAAACTCATTTTGTATCTGAAGA...AGGCACACAGTGGCATGTTGCTGGTGTAGTAGTTGAAAGCTTACTTAAATCCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028771.8 |
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| 3UTR-3UTR CCA 90 bp | GTTCAAGGTCATCTTCAGATACAAAATGAGTTTGGGACCAGTTTGCCCTACATGGTTGTGGAAGACAAGTaGATGGAGGAGGTGTGTTTA | + |
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Preference number: 2 (lower is better) Translates to: VQGHLQIQNEFGTSLPYMVVEDK*MEEVCL Trigger: TAAACACACCTCCTCCATCCACTTGTCTTCCACAAC...CATGTAGGGCAAACTGGTCCCAAACTCATTTTGTATCTGAAGATGACCTTGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
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| 3UTR-3UTR TCA 90 bp | GTTCAAGGTCATCTTCAGATACAAAATGAGTTTGGGACCAGTTTGCCCTACATGCAGATGGCAAATACATaGAAAGTCAGAACAAGGCTC | + |
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Preference number: 2 (lower is better) Translates to: VQGHLQIQNEFGTSLPYMQMANT*KVRTRL Trigger: GAGCCTTGTTCTGACTTTTCATGTATTTGCCATCTG...CATGTAGGGCAAACTGGTCCCAAACTCATTTTGTATCTGAAGATGACCTTGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
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| 3UTR CAA 90 bp | GACAGGAGTGTGATAGACAAGTGTTGTACAACTAAAGCACACCCTTaGCCCTGTGGCTTTTATTTAACAAGTAGAGAGAGTAGAGGTTTT | + |
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Preference number: 2 (lower is better) Translates to: DRSVIDKCCTTKAHP*PCGFYLTSRESRGF Trigger: AAAACCTCTACTCTCTCTACTTGTTAAATAAAAGCCACAGGGCAAAGGGTGTGCTTTAGTTGTACAACACTTGTCTATCACACTCCTGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
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| 3UTR-3UTR TCA 90 bp | TTGGTTTTGGTGGTACAGTTCAGGGACAGGAGTGTGATAGACAAGTGTTGTACAATCAGGACCTTGACATaGAAAACCTCTGTTAAGAAT | + |
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Preference number: 2 (lower is better) Translates to: LVLVVQFRDRSVIDKCCTIRTLT*KTSVKN Trigger: ATTCTTAACAGAGGTTTTTCATGTCAAGGTCCTGAT...TGTACAACACTTGTCTATCACACTCCTGTCCCTGAACTGTACCACCAAAACCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
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| 3UTR-3UTR CCA 90 bp | AAGCATTACACACATCTCAGAATCTCTGTAAGGCAGAGCAAAGATCAGAAGGTCAGCAATTCTCAGCTTTaGTTTTGGTGGTACAGTTCA | + |
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Preference number: 2 (lower is better) Translates to: KHYTHLRISVRQSKDQKVSNSQL*FWWYSS Trigger: TGAACTGTACCACCAAAACCAAAGCTGAGAATTGCT...GACCTTCTGATCTTTGCTCTGCCTTACAGAGATTCTGAGATGTGTGTAATGCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
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| 3UTR-3UTR TCA 90 bp | GTTCAAGGTCATCTTCAGATACAAAATGAGTTTGGGACCAGTTTGCCCTACATGATCAGGACCTTGACATaGAAAACCTCTGTTAAGAAT | + |
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Preference number: 2 (lower is better) Translates to: VQGHLQIQNEFGTSLPYMIRTLT*KTSVKN Trigger: ATTCTTAACAGAGGTTTTTCATGTCAAGGTCCTGAT...CATGTAGGGCAAACTGGTCCCAAACTCATTTTGTATCTGAAGATGACCTTGAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
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| 3UTR-3UTR TCA 90 bp | GCTTTGAGATTTCAAAAAGTCCTGGTCATTCGTTTTTCTCTCTGCTTATTTGTGAGGAGGTGTGTTTACTaGTCTCTGATGTCCATCCAA | + |
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Preference number: 2 (lower is better) Translates to: ALRFQKVLVIRFSLCLFVRRCVY*SLMSIQ Trigger: TTGGATGGACATCAGAGATCAGTAAACACACCTCCT...CACAAATAAGCAGAGAGAAAAACGAATGACCAGGACTTTTTGAAATCTCAAAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000028771.8 |
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| 3UTR-3UTR CCA 90 bp | GCTTTGAGATTTCAAAAAGTCCTGGTCATTCGTTTTTCTCTCTGCTTATTTGTGAGCAATTCTCAGCTTTaGTTTTGGTGGTACAGTTCA | + |
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Preference number: 2 (lower is better) Translates to: ALRFQKVLVIRFSLCLFVSNSQL*FWWYSS Trigger: TGAACTGTACCACCAAAACCAAAGCTGAGAATTGCT...CACAAATAAGCAGAGAGAAAAACGAATGACCAGGACTTTTTGAAATCTCAAAGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000028771.8 |
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| 3UTR GCA 72 bp | AGCAGGGTCTCGAGACTGAGGCAGACAGTGAGCTTCTaGTCCTCCTGCCTCTACCTCCTGAGTACTGAACTA | + |
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Preference number: 3 (lower is better) Translates to: SRVSRLRQTVSF*SSCLYLLSTEL Trigger: TAGTTCAGTACTCAGGAGGTAGAGGCAGGAGGAGCAGAAGCTCACTGTCTGCCTCAGTCTCGAGACCCTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028771.8 |
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| 3UTR-3UTR CAA 90 bp | GTATGGTGGTATACATCTAACTCTGCACTCACCTGGGAGGTAGAGGCTGGGGGATTCTCAGCTTTGGTTTaGGTGGTACAGTTCAGGGAC | + |
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Preference number: 3 (lower is better) Translates to: VWWYTSNSALTWEVEAGGFSALV*VVQFRD Trigger: GTCCCTGAACTGTACCACCAAAACCAAAGCTGAGAA...TCCCCCAGCCTCTACCTCCCAGGTGAGTGCAGAGTTAGATGTATACCACCATAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
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| 3UTR-3UTR CAA 90 bp | GTATGGTGGTATACATCTAACTCTGCACTCACCTGGGAGGTAGAGGCTGGGGGACAGCAATTCTCAGCTTaGGTTTTGGTGGTACAGTTC | + |
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Preference number: 3 (lower is better) Translates to: VWWYTSNSALTWEVEAGGQQFSA*VLVVQF Trigger: GAACTGTACCACCAAAACCAAAGCTGAGAATTGCTG...TCCCCCAGCCTCTACCTCCCAGGTGAGTGCAGAGTTAGATGTATACCACCATAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
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| 3UTR TCA 72 bp | GGGATCAGGAGTTCAAGGTCATCTTCAGATACAAAATaGGTTTGGGACCAGTTTGCCCTACATGAGGCCCTG | + |
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Preference number: 3 (lower is better) Translates to: GIRSSRSSSDTK*VWDQFALHEAL Trigger: CAGGGCCTCATGTAGGGCAAACTGGTCCCAAACTCATTTTGTATCTGAAGATGACCTTGAACTCCTGATCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
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| 3UTR-3UTR CAA 90 bp | AAGTGGATGGAGGAGGTGTGTTTACTGATCTCTGATGTCCATCCAAATCCTGAGTCAGAAGGTCACCCCTaGCAGCTTTCCTCTCTTTAC | + |
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Preference number: 3 (lower is better) Translates to: KWMEEVCLLISDVHPNPESEGHP*QLSSLY Trigger: GTAAAGAGAGGAAAGCTGCAAGGGGTGACCTTCTGA...CTCAGGATTTGGATGGACATCAGAGATCAGTAAACACACCTCCTCCATCCACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
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| 3UTR-3UTR CAA 90 bp | GTGAGCTGCCTGACTTGGGTCCTAAAAATTAAAGAGTCCTTTGCAAGAGAACCTGCCCTGTCTCAACAGTaGTGGAAGACAAGTGGATGG | + |
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Preference number: 3 (lower is better) Translates to: VSCLTWVLKIKESFAREPALSQQ*WKTSGW Trigger: CCATCCACTTGTCTTCCACAACTGTTGAGACAGGGC...AGGTTCTCTTGCAAAGGACTCTTTAATTTTTAGGACCCAAGTCAGGCAGCTCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028771.8 |
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| 3UTR-3UTR CAA 90 bp | AAGCATTACACACATCTCAGAATCTCTGTAAGGCAGAGCAAAGATCAGAAGGTCAGATTCTGCTACAGCTaGTGCAGAAAAGGGTGCAGG | + |
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Preference number: 3 (lower is better) Translates to: KHYTHLRISVRQSKDQKVRFCYS*CRKGCR Trigger: CCTGCACCCTTTTCTGCACAAGCTGTAGCAGAATCT...GACCTTCTGATCTTTGCTCTGCCTTACAGAGATTCTGAGATGTGTGTAATGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
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| 3UTR GCA 72 bp | GATTTAAGTAAGCTTTCAACTACTACACCAGCAACATaGCACTGTGTGCCTGCCTGCTGCCATAGTAGTCAT | + |
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Preference number: 3 (lower is better) Translates to: DLSKLSTTTPAT*HCVPACCHSSH Trigger: ATGACTACTATGGCAGCAGGCAGGCACACAGTGGCATGTTGCTGGTGTAGTAGTTGAAAGCTTACTTAAATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028771.8 |
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| 3UTR CCA 72 bp | GGGAGATATGGTTTTGGTGAGGTGTGTCACTATGGGTaGGCTTTGAGATTTCAAAAAGTCCTGGTCATTCGT | + |
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Preference number: 3 (lower is better) Translates to: GRYGFGEVCHYG*ALRFQKVLVIR Trigger: ACGAATGACCAGGACTTTTTGAAATCTCAAAGCCCACCCATAGTGACACACCTCACCAAAACCATATCTCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028771.8 |
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| 3UTR TCA 72 bp | CAGGTCATCTCCCTCGGAACTATCAGGACCTTGACATaGAAAACCTCTGTTAAGAATCATGAGGACAAGTCT | + |
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Preference number: 3 (lower is better) Translates to: QVISLGTIRTLT*KTSVKNHEDKS Trigger: AGACTTGTCCTCATGATTCTTAACAGAGGTTTTTCATGTCAAGGTCCTGATAGTTCCGAGGGAGATGACCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
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| 3UTR TCA 72 bp | TGGTTGTTTGGGAAAGATTGGGAGATATGGTTTTGGTaGGGTGTGTCACTATGGGTGGGCTTTGAGATTTCA | + |
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Preference number: 3 (lower is better) Translates to: WLFGKDWEIWFW*GVSLWVGFEIS Trigger: TGAAATCTCAAAGCCCACCCATAGTGACACACCTCACCAAAACCATATCTCCCAATCTTTCCCAAACAACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028771.8 |
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| 3UTR GCA 72 bp | TCTTATTTTCTCATGCTAAGATTCTGCTACAGCTTGTaGAGAAAAGGGTGCAGGTCATCTCCCTCGGAACTA | + |
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Preference number: 3 (lower is better) Translates to: SYFLMLRFCYSL*RKGCRSSPSEL Trigger: TAGTTCCGAGGGAGATGACCTGCACCCTTTTCTGCACAAGCTGTAGCAGAATCTTAGCATGAGAAAATAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
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| 3UTR-3UTR CAA 90 bp | CCCTGTCTCAACAGTTGTGGAAGACAAGTGGATGGAGGAGGTGTGTTTACTGATGATAGAAAAGAGCTTTaGACTGAAGTAGAGAAAGAG | + |
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Preference number: 3 (lower is better) Translates to: PCLNSCGRQVDGGGVFTDDRKEL*TEVEKE Trigger: CTCTTTCTCTACTTCAGTCAAAAGCTCTTTTCTATC...ATCAGTAAACACACCTCCTCCATCCACTTGTCTTCCACAACTGTTGAGACAGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
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| 3UTR-3UTR CAA 90 bp | AAGCATTACACACATCTCAGAATCTCTGTAAGGCAGAGCAAAGATCAGAAGGTCACTAAAGCACACCCTTaGCCCTGTGGCTTTTATTTA | + |
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Preference number: 3 (lower is better) Translates to: KHYTHLRISVRQSKDQKVTKAHP*PCGFYL Trigger: TAAATAAAAGCCACAGGGCAAAGGGTGTGCTTTAGT...GACCTTCTGATCTTTGCTCTGCCTTACAGAGATTCTGAGATGTGTGTAATGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
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| 3UTR CCA 72 bp | GGAAAAACAAAAACACTTCTTTATAGCCAGGTATGGTaGTATACATCTAACTCTGCACTCACCTGGGAGGTA | + |
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Preference number: 3 (lower is better) Translates to: GKTKTLLYSQVW*YTSNSALTWEV Trigger: TACCTCCCAGGTGAGTGCAGAGTTAGATGTATACCACCATACCTGGCTATAAAGAAGTGTTTTTGTTTTTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
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| 3UTR CCA 72 bp | AAGGGAAAAACAAAAACACTTCTTTATAGCCAGGTATaGTGGTATACATCTAACTCTGCACTCACCTGGGAG | + |
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Preference number: 3 (lower is better) Translates to: KGKTKTLLYSQV*WYTSNSALTWE Trigger: CTCCCAGGTGAGTGCAGAGTTAGATGTATACCACCATACCTGGCTATAAAGAAGTGTTTTTGTTTTTCCCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
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| 3UTR-3UTR CAA 90 bp | GTGAGCTGCCTGACTTGGGTCCTAAAAATTAAAGAGTCCTTTGCAAGAGAACCTGATAGAAAAGAGCTTTaGACTGAAGTAGAGAAAGAG | + |
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Preference number: 3 (lower is better) Translates to: VSCLTWVLKIKESFAREPDRKEL*TEVEKE Trigger: CTCTTTCTCTACTTCAGTCAAAAGCTCTTTTCTATC...AGGTTCTCTTGCAAAGGACTCTTTAATTTTTAGGACCCAAGTCAGGCAGCTCAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028771.8 |
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| 3UTR TCA 72 bp | GAAAATGGCTCCCATAGGCTCATATATTTGAATACTTaGGCGATTGGTTGTTTGGGAAAGATTGGGAGATAT | + |
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Preference number: 3 (lower is better) Translates to: ENGSHRLIYLNT*AIGCLGKIGRY Trigger: ATATCTCCCAATCTTTCCCAAACAACCAATCGCTCAAGTATTCAAATATATGAGCCTATGGGAGCCATTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028771.8 |
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| 3UTR TCA 72 bp | ATGAAATATCTTTCAAAGGCCCATTTGCTAAAGGTTTaGTTATTGCCTAAGGTGCTCCTGAGGTTTAATAAA | + |
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Preference number: 3 (lower is better) Translates to: MKYLSKAHLLKV*LLPKVLLRFNK Trigger: TTTATTAAACCTCAGGAGCACCTTAGGCAATAATCAAACCTTTAGCAAATGGGCCTTTGAAAGATATTTCAT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028771.8 |
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| CDS-3UTR CCA 90 bp | GTATGGTGGTATACATCTAACTCTGCACTCACCTGGGAGGTAGAGGCTGGGGGACGCATTGCCGTCCTCTaGCCTCTGCTCCGGCAGAGA | + |
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Preference number: 4 (lower is better) Translates to: VWWYTSNSALTWEVEAGGRIAVL*PLLRQR Trigger: TCTCTGCCGGAGCAGAGGCCAGAGGACGGCAATGCG...TCCCCCAGCCTCTACCTCCCAGGTGAGTGCAGAGTTAGATGTATACCACCATAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
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| CDS-3UTR TCA 90 bp | GGTGCAGGTCATCTCCCTCGGAACTATCAGGACCTTGACATGAAAAACCTCTGTCACAGCCTGGCCTTTTaGAGCACTCCCAGGTGCAGT | + |
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Preference number: 4 (lower is better) Translates to: GAGHLPRNYQDLDMKNLCHSLAF*STPRCS Trigger: ACTGCACCTGGGAGTGCTTCAAAAGGCCAGGCTGTG...ACAGAGGTTTTTCATGTCAAGGTCCTGATAGTTCCGAGGGAGATGACCTGCACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
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| CDS-3UTR GCA 90 bp | AAGTGGATGGAGGAGGTGTGTTTACTGATCTCTGATGTCCATCCAAATCCTGAGCCGTCCTCTGGCCTCTaGTCCGGCAGAGAAGGAACT | + |
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Preference number: 4 (lower is better) Translates to: KWMEEVCLLISDVHPNPEPSSGL*SGREGT Trigger: AGTTCCTTCTCTGCCGGAGCAGAGGCCAGAGGACGG...CTCAGGATTTGGATGGACATCAGAGATCAGTAAACACACCTCCTCCATCCACTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
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| CDS-3UTR GCA 90 bp | TTTGGTTTTGGTGGTACAGTTCAGGGACAGGAGTGTGATAGACAAGTGTTGTACCCGTCCTCTGGCCTCTaGTCCGGCAGAGAAGGAACT | + |
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Preference number: 4 (lower is better) Translates to: FGFGGTVQGQECDRQVLYPSSGL*SGREGT Trigger: AGTTCCTTCTCTGCCGGAGCAGAGGCCAGAGGACGG...GTACAACACTTGTCTATCACACTCCTGTCCCTGAACTGTACCACCAAAACCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
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| CDS-3UTR GCA 90 bp | GAGGATTTAAGTAAGCTTTCAACTACTACACCAGCAACATGCCACTGTGTGCCTTGGCCTTGTGGGCACTaGTGCCTGGCAGGAGTACAG | + |
|
Preference number: 4 (lower is better) Translates to: EDLSKLSTTTPATCHCVPWPCGH*CLAGVQ Trigger: CTGTACTCCTGCCAGGCAGCAGTGCCCACAAGGCCA...AGGCACACAGTGGCATGTTGCTGGTGTAGTAGTTGAAAGCTTACTTAAATCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028771.8 |
||
| CDS-3UTR CCA 90 bp | TTTGGTTTTGGTGGTACAGTTCAGGGACAGGAGTGTGATAGACAAGTGTTGTACGTGGGCACTGCTGCCTaGCAGGAGTACAGGGTACAG | + |
|
Preference number: 4 (lower is better) Translates to: FGFGGTVQGQECDRQVLYVGTAA*QEYRVQ Trigger: CTGTACCCTGTACTCCTGCCAGGCAGCAGTGCCCAC...GTACAACACTTGTCTATCACACTCCTGTCCCTGAACTGTACCACCAAAACCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
||
| 3UTR CAA 72 bp | GACCAGTTTGCCCTACATGAGGCCCTGTCTCAACAGTaGTGGAAGACAAGTGGATGGAGGAGGTGTGTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: DQFALHEALSQQ*WKTSGWRRCVY Trigger: GTAAACACACCTCCTCCATCCACTTGTCTTCCACAACTGTTGAGACAGGGCCTCATGTAGGGCAAACTGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
||
| CDS-3UTR GCA 90 bp | GTTCAAGGTCATCTTCAGATACAAAATGAGTTTGGGACCAGTTTGCCCTACATGTGGCCTTGTGGGCACTaGTGCCTGGCAGGAGTACAG | + |
|
Preference number: 4 (lower is better) Translates to: VQGHLQIQNEFGTSLPYMWPCGH*CLAGVQ Trigger: CTGTACTCCTGCCAGGCAGCAGTGCCCACAAGGCCA...CATGTAGGGCAAACTGGTCCCAAACTCATTTTGTATCTGAAGATGACCTTGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
||
| CDS-3UTR CCA 90 bp | GGTGCAGGTCATCTCCCTCGGAACTATCAGGACCTTGACATGAAAAACCTCTGTAGAGAGCCTTCCTCTTaGAGGAACTGGGGTCACTAT | + |
|
Preference number: 4 (lower is better) Translates to: GAGHLPRNYQDLDMKNLCREPSS*RNWGHY Trigger: ATAGTGACCCCAGTTCCTCCAAGAGGAAGGCTCTCT...ACAGAGGTTTTTCATGTCAAGGTCCTGATAGTTCCGAGGGAGATGACCTGCACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
||
| CDS-3UTR CCA 90 bp | GTTCAAGGTCATCTTCAGATACAAAATGAGTTTGGGACCAGTTTGCCCTACATGGTGGGCACTGCTGCCTaGCAGGAGTACAGGGTACAG | + |
|
Preference number: 4 (lower is better) Translates to: VQGHLQIQNEFGTSLPYMVGTAA*QEYRVQ Trigger: CTGTACCCTGTACTCCTGCCAGGCAGCAGTGCCCAC...CATGTAGGGCAAACTGGTCCCAAACTCATTTTGTATCTGAAGATGACCTTGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
||
| CDS-3UTR CCA 90 bp | GGTGCAGGTCATCTCCCTCGGAACTATCAGGACCTTGACATGAAAAACCTCTGTCAGCTTTCCTTTGTGTaGCTTGTAGTTGAGGGGACG | + |
|
Preference number: 4 (lower is better) Translates to: GAGHLPRNYQDLDMKNLCQLSFV*LVVEGT Trigger: CGTCCCCTCAACTACAAGCCACACAAAGGAAAGCTG...ACAGAGGTTTTTCATGTCAAGGTCCTGATAGTTCCGAGGGAGATGACCTGCACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
||
| CDS-3UTR TCA 90 bp | AAGTGGATGGAGGAGGTGTGTTTACTGATCTCTGATGTCCATCCAAATCCTGAGTACTTCTCCTTCTCCTaGAGAAGCCGCATTGCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: KWMEEVCLLISDVHPNPEYFSFS*RSRIAV Trigger: GACGGCAATGCGGCTTCTTCAGGAGAAGGAGAAGTA...CTCAGGATTTGGATGGACATCAGAGATCAGTAAACACACCTCCTCCATCCACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
||
| CDS-3UTR TCA 90 bp | AAGTGGATGGAGGAGGTGTGTTTACTGATCTCTGATGTCCATCCAAATCCTGAGTTGACTTGGGTGTCCTaGACACAGCCTGGCCTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: KWMEEVCLLISDVHPNPELTWVS*TQPGLL Trigger: CAAAAGGCCAGGCTGTGTTCAGGACACCCAAGTCAA...CTCAGGATTTGGATGGACATCAGAGATCAGTAAACACACCTCCTCCATCCACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
||
| CDS-3UTR TCA 90 bp | AAGTGGATGGAGGAGGTGTGTTTACTGATCTCTGATGTCCATCCAAATCCTGAGCCTTTCAGTGGCCTTTaGCTTGGGTGTCCTGAACAC | + |
|
Preference number: 4 (lower is better) Translates to: KWMEEVCLLISDVHPNPEPFSGL*LGCPEH Trigger: GTGTTCAGGACACCCAAGTCAAAGGCCACTGAAAGG...CTCAGGATTTGGATGGACATCAGAGATCAGTAAACACACCTCCTCCATCCACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
||
| CDS-3UTR TCA 90 bp | AAGTGGATGGAGGAGGTGTGTTTACTGATCTCTGATGTCCATCCAAATCCTGAGTGTGTGGCTTGTAGTTaGGGGGACGAGACAAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: KWMEEVCLLISDVHPNPECVACS*GDETSL Trigger: CAAGCTTGTCTCGTCCCCTCAACTACAAGCCACACA...CTCAGGATTTGGATGGACATCAGAGATCAGTAAACACACCTCCTCCATCCACTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
||
| CDS-3UTR TCA 90 bp | GGTGCAGGTCATCTCCCTCGGAACTATCAGGACCTTGACATGAAAAACCTCTGTTGGTGTCTTGGTCAGTaGGCACTTATGTTCATTGTC | + |
|
Preference number: 4 (lower is better) Translates to: GAGHLPRNYQDLDMKNLCWCLGQ*ALMFIV Trigger: GACAATGAACATAAGTGCTCACTGACCAAGACACCA...ACAGAGGTTTTTCATGTCAAGGTCCTGATAGTTCCGAGGGAGATGACCTGCACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
||
| CDS-3UTR TCA 90 bp | TTGGTTTTGGTGGTACAGTTCAGGGACAGGAGTGTGATAGACAAGTGTTGTACACCTTTCAGTGGCCTTTaGCTTGGGTGTCCTGAACAC | + |
|
Preference number: 4 (lower is better) Translates to: LVLVVQFRDRSVIDKCCTPFSGL*LGCPEH Trigger: GTGTTCAGGACACCCAAGTCAAAGGCCACTGAAAGG...TGTACAACACTTGTCTATCACACTCCTGTCCCTGAACTGTACCACCAAAACCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
||
| CDS-3UTR CCA 90 bp | TTTGGTTTTGGTGGTACAGTTCAGGGACAGGAGTGTGATAGACAAGTGTTGTACCGTGTGGAGACTTTCTaGCTGGTGTCTTGGTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: FGFGGTVQGQECDRQVLYRVETF*LVSWSV Trigger: CACTGACCAAGACACCAGCCAGAAAGTCTCCACACG...GTACAACACTTGTCTATCACACTCCTGTCCCTGAACTGTACCACCAAAACCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
||
| CDS-3UTR CCA 90 bp | TTGGTTTTGGTGGTACAGTTCAGGGACAGGAGTGTGATAGACAAGTGTTGTACACGTGTGGAGACTTTCTaGCTGGTGTCTTGGTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LVLVVQFRDRSVIDKCCTRVETF*LVSWSV Trigger: CACTGACCAAGACACCAGCCAGAAAGTCTCCACACG...TGTACAACACTTGTCTATCACACTCCTGTCCCTGAACTGTACCACCAAAACCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
||
| CDS-3UTR CCA 90 bp | TTGGTTTTGGTGGTACAGTTCAGGGACAGGAGTGTGATAGACAAGTGTTGTACAAGGTGCAGTCACGTGTaGAGACTTTCTGGCTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LVLVVQFRDRSVIDKCCTRCSHV*RLSGWC Trigger: ACACCAGCCAGAAAGTCTCCACACGTGACTGCACCT...TGTACAACACTTGTCTATCACACTCCTGTCCCTGAACTGTACCACCAAAACCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
||
| CDS-3UTR CCA 90 bp | GTGAGCTGCCTGACTTGGGTCCTAAAAATTAAAGAGTCCTTTGCAAGAGAACCTGTCCTGAACACAGCCTaGCCTTTTGAAGCACTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: VSCLTWVLKIKESFAREPVLNTA*PFEALP Trigger: TGGGAGTGCTTCAAAAGGCCAGGCTGTGTTCAGGAC...AGGTTCTCTTGCAAAGGACTCTTTAATTTTTAGGACCCAAGTCAGGCAGCTCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028771.8 |
||
| CDS-3UTR CCA 90 bp | TTTGGTTTTGGTGGTACAGTTCAGGGACAGGAGTGTGATAGACAAGTGTTGTACGTCCTGAACACAGCCTaGCCTTTTGAAGCACTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: FGFGGTVQGQECDRQVLYVLNTA*PFEALP Trigger: TGGGAGTGCTTCAAAAGGCCAGGCTGTGTTCAGGAC...GTACAACACTTGTCTATCACACTCCTGTCCCTGAACTGTACCACCAAAACCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
||
| CDS-3UTR CCA 90 bp | GGTGCAGGTCATCTCCCTCGGAACTATCAGGACCTTGACATGAAAAACCTCTGTTCCATCGTTCTTCCCTaGTTTGGAGATGAGGTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: GAGHLPRNYQDLDMKNLCSIVLP*FGDEVV Trigger: AACAACCTCATCTCCAAACCAGGGAAGAACGATGGA...ACAGAGGTTTTTCATGTCAAGGTCCTGATAGTTCCGAGGGAGATGACCTGCACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
||
| CDS-3UTR TCA 90 bp | GGTTTTGGTGGTACAGTTCAGGGACAGGAGTGTGATAGACAAGTGTTGTACAACATTCATTTTAGTTGCTaGGTGGCCTTGTGGGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: GFGGTVQGQECDRQVLYNIHFSC*VALWAL Trigger: CAGTGCCCACAAGGCCACTCAGCAACTAAAATGAAT...GTTGTACAACACTTGTCTATCACACTCCTGTCCCTGAACTGTACCACCAAAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
||
| CDS-3UTR TCA 90 bp | AAGCATTACACACATCTCAGAATCTCTGTAAGGCAGAGCAAAGATCAGAAGGTCTTGACTTGGGTGTCCTaGACACAGCCTGGCCTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: KHYTHLRISVRQSKDQKVLTWVS*TQPGLL Trigger: CAAAAGGCCAGGCTGTGTTCAGGACACCCAAGTCAA...GACCTTCTGATCTTTGCTCTGCCTTACAGAGATTCTGAGATGTGTGTAATGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
||
| CDS-3UTR GCA 90 bp | TTTGGTTTTGGTGGTACAGTTCAGGGACAGGAGTGTGATAGACAAGTGTTGTACGATTCCGTCTCAGCTTaGTCCTCACTGCTAACGTGT | + |
|
Preference number: 4 (lower is better) Translates to: FGFGGTVQGQECDRQVLYDSVSA*SSLLTC Trigger: ACACGTTAGCAGTGAGGAGCAAGCTGAGACGGAATC...GTACAACACTTGTCTATCACACTCCTGTCCCTGAACTGTACCACCAAAACCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
||
| CDS-3UTR GCA 90 bp | AAGCATTACACACATCTCAGAATCTCTGTAAGGCAGAGCAAAGATCAGAAGGTCCCATGGATGGTCTTGTaGTTCTTCCTCCTCCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: KHYTHLRISVRQSKDQKVPWMVL*FFLLLL Trigger: GAGGAGGAGGAGGAAGAAGCACAAGACCATCCATGG...GACCTTCTGATCTTTGCTCTGCCTTACAGAGATTCTGAGATGTGTGTAATGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
||
| CDS-3UTR GCA 90 bp | CCCTGTCTCAACAGTTGTGGAAGACAAGTGGATGGAGGAGGTGTGTTTACTGATGGGACGAGACAAGCTTaGTTTGAGATCAAATACTGG | + |
|
Preference number: 4 (lower is better) Translates to: PCLNSCGRQVDGGGVFTDGTRQA*FEIKYW Trigger: CCAGTATTTGATCTCAAAGCAAGCTTGTCTCGTCCC...ATCAGTAAACACACCTCCTCCATCCACTTGTCTTCCACAACTGTTGAGACAGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
||
| CDS-3UTR CCA 90 bp | GTTCAAGGTCATCTTCAGATACAAAATGAGTTTGGGACCAGTTTGCCCTACATGAGGTGCAGTCACGTGTaGAGACTTTCTGGCTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: VQGHLQIQNEFGTSLPYMRCSHV*RLSGWC Trigger: ACACCAGCCAGAAAGTCTCCACACGTGACTGCACCT...CATGTAGGGCAAACTGGTCCCAAACTCATTTTGTATCTGAAGATGACCTTGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
||
| 3UTR CAA 72 bp | GGTCATCTTCAGATACAAAATGAGTTTGGGACCAGTTaGCCCTACATGAGGCCCTGTCTCAACAGTTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GHLQIQNEFGTS*PYMRPCLNSCG Trigger: TCCACAACTGTTGAGACAGGGCCTCATGTAGGGCAAACTGGTCCCAAACTCATTTTGTATCTGAAGATGACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
||
| CDS-3UTR TCA 90 bp | CCTTTTCCTATGAGCGATATCTTATTTTCTCATGCTAAGATTCTGCTACAGCTTCACAGCCTGGCCTTTTaGAGCACTCCCAGGTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: PFPMSDILFSHAKILLQLHSLAF*STPRCS Trigger: ACTGCACCTGGGAGTGCTTCAAAAGGCCAGGCTGTG...AAGCTGTAGCAGAATCTTAGCATGAGAAAATAAGATATCGCTCATAGGAAAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
||
| CDS-3UTR GCA 90 bp | GTTCAAGGTCATCTTCAGATACAAAATGAGTTTGGGACCAGTTTGCCCTACATGGATTCCGTCTCAGCTTaGTCCTCACTGCTAACGTGT | + |
|
Preference number: 4 (lower is better) Translates to: VQGHLQIQNEFGTSLPYMDSVSA*SSLLTC Trigger: ACACGTTAGCAGTGAGGAGCAAGCTGAGACGGAATC...CATGTAGGGCAAACTGGTCCCAAACTCATTTTGTATCTGAAGATGACCTTGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
||
| CDS-3UTR GCA 90 bp | AAGCATTACACACATCTCAGAATCTCTGTAAGGCAGAGCAAAGATCAGAAGGTCCAGAGAAGGAACTTCTaGTGTATCCCTGGGGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: KHYTHLRISVRQSKDQKVQRRNF*CIPGVL Trigger: CAAGACCCCAGGGATACAGCAGAAGTTCCTTCTCTG...GACCTTCTGATCTTTGCTCTGCCTTACAGAGATTCTGAGATGTGTGTAATGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
||
| CDS-3UTR CCA 90 bp | CATTACACACATCTCAGAATCTCTGTAAGGCAGAGCAAAGATCAGAAGGTCACCTCCTGCAACAAAGTCTaGGAGGTAGGAATTCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: HYTHLRISVRQSKDQKVTSCNKV*EVGIPW Trigger: CCATGGAATTCCTACCTCCCAGACTTTGTTGCAGGA...GGTGACCTTCTGATCTTTGCTCTGCCTTACAGAGATTCTGAGATGTGTGTAATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
||
| CDS-3UTR CCA 90 bp | GTTCAAGGTCATCTTCAGATACAAAATGAGTTTGGGACCAGTTTGCCCTACATGAGAGAGCCTTCCTCTTaGAGGAACTGGGGTCACTAT | + |
|
Preference number: 4 (lower is better) Translates to: VQGHLQIQNEFGTSLPYMREPSS*RNWGHY Trigger: ATAGTGACCCCAGTTCCTCCAAGAGGAAGGCTCTCT...CATGTAGGGCAAACTGGTCCCAAACTCATTTTGTATCTGAAGATGACCTTGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
||
| CDS-3UTR TCA 90 bp | GGTTTTGGTGGTACAGTTCAGGGACAGGAGTGTGATAGACAAGTGTTGTACAACGAGACAAGCTTGCTTTaGGATCAAATACTGGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GFGGTVQGQECDRQVLYNETSLL*DQILAS Trigger: AGAAGCCAGTATTTGATCTCAAAGCAAGCTTGTCTC...GTTGTACAACACTTGTCTATCACACTCCTGTCCCTGAACTGTACCACCAAAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
||
| CDS-3UTR CCA 90 bp | TCTTATTTTCTCATGCTAAGATTCTGCTACAGCTTGTGCAGAAAAGGGTGCAGGTCCTGCAACAAAGTCTaGGAGGTAGGAATTCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: SYFLMLRFCYSLCRKGCRSCNKV*EVGIPW Trigger: CCATGGAATTCCTACCTCCCAGACTTTGTTGCAGGA...CCTGCACCCTTTTCTGCACAAGCTGTAGCAGAATCTTAGCATGAGAAAATAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
||
| CDS-3UTR CCA 90 bp | TTGGTTTTGGTGGTACAGTTCAGGGACAGGAGTGTGATAGACAAGTGTTGTACACTTCTGCTGTATCCCTaGGGTCTTGATTTTCCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: LVLVVQFRDRSVIDKCCTLLLYP*GLDFPD Trigger: ATCAGGAAAATCAAGACCCCAGGGATACAGCAGAAG...TGTACAACACTTGTCTATCACACTCCTGTCCCTGAACTGTACCACCAAAACCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
||
| CDS-3UTR CCA 90 bp | CTGATCTCTGATGTCCATCCAAATCCTGAGCAACTTACGCTTAAAACAATGAACCAGCTTTCCTTTGTGTaGCTTGTAGTTGAGGGGACG | + |
|
Preference number: 4 (lower is better) Translates to: LISDVHPNPEQLTLKTMNQLSFV*LVVEGT Trigger: CGTCCCCTCAACTACAAGCCACACAAAGGAAAGCTG...GTTCATTGTTTTAAGCGTAAGTTGCTCAGGATTTGGATGGACATCAGAGATCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
||
| CDS-3UTR TCA 90 bp | CCTTTTCCTATGAGCGATATCTTATTTTCTCATGCTAAGATTCTGCTACAGCTTTACTTCTCCTTCTCCTaGAGAAGCCGCATTGCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: PFPMSDILFSHAKILLQLYFSFS*RSRIAV Trigger: GACGGCAATGCGGCTTCTTCAGGAGAAGGAGAAGTA...AAGCTGTAGCAGAATCTTAGCATGAGAAAATAAGATATCGCTCATAGGAAAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
||
| CDS-3UTR TCA 90 bp | TTGGTTTTGGTGGTACAGTTCAGGGACAGGAGTGTGATAGACAAGTGTTGTACAGAGACAAGCTTGCTTTaGGATCAAATACTGGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LVLVVQFRDRSVIDKCCTETSLL*DQILAS Trigger: AGAAGCCAGTATTTGATCTCAAAGCAAGCTTGTCTC...TGTACAACACTTGTCTATCACACTCCTGTCCCTGAACTGTACCACCAAAACCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
||
| CDS-3UTR GCA 90 bp | GCTTTGAGATTTCAAAAAGTCCTGGTCATTCGTTTTTCTCTCTGCTTATTTGTGCCATGGATGGTCTTGTaGTTCTTCCTCCTCCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ALRFQKVLVIRFSLCLFVPWMVL*FFLLLL Trigger: GAGGAGGAGGAGGAAGAAGCACAAGACCATCCATGG...CACAAATAAGCAGAGAGAAAAACGAATGACCAGGACTTTTTGAAATCTCAAAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000028771.8 |
||
| CDS-3UTR CCA 90 bp | GGTTTTGGTGGTACAGTTCAGGGACAGGAGTGTGATAGACAAGTGTTGTACAACCTTCTTACTAGAACTTaGAGTCTGTGTTGCTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: GFGGTVQGQECDRQVLYNLLTRT*SLCCFS Trigger: ACTGAAGCAACACAGACTCCAAGTTCTAGTAAGAAG...GTTGTACAACACTTGTCTATCACACTCCTGTCCCTGAACTGTACCACCAAAACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
||
| CDS-3UTR CCA 90 bp | TCTTATTTTCTCATGCTAAGATTCTGCTACAGCTTGTGCAGAAAAGGGTGCAGGTCCATCGTTCTTCCCTaGTTTGGAGATGAGGTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SYFLMLRFCYSLCRKGCRSIVLP*FGDEVV Trigger: AACAACCTCATCTCCAAACCAGGGAAGAACGATGGA...CCTGCACCCTTTTCTGCACAAGCTGTAGCAGAATCTTAGCATGAGAAAATAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
||
| 3UTR CAA 72 bp | ATATCTTATTTTCTCATGCTAAGATTCTGCTACAGCTaGTGCAGAAAAGGGTGCAGGTCATCTCCCTCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: ISYFLMLRFCYS*CRKGCRSSPSE Trigger: TTCCGAGGGAGATGACCTGCACCCTTTTCTGCACAAGCTGTAGCAGAATCTTAGCATGAGAAAATAAGATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
||
| 3UTR CAA 72 bp | GCTGAGATGAAACGCACAGTAATCCTGCTAAGATACTaGCCACTAAAAATAGGAGTCACCTCTGGTGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: AEMKRTVILLRY*PLKIGVTSGGF Trigger: AAAACCACCAGAGGTGACTCCTATTTTTAGTGGCAAGTATCTTAGCAGGATTACTGTGCGTTTCATCTCAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028771.8 |
||
| CDS-3UTR TCA 90 bp | CTGATCTCTGATGTCCATCCAAATCCTGAGCAACTTACGCTTAAAACAATGAACCCTTTCATCTCCAAATaGTCCTGCAACAAAGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LISDVHPNPEQLTLKTMNPFISK*SCNKVW Trigger: CCAGACTTTGTTGCAGGATCATTTGGAGATGAAAGG...GTTCATTGTTTTAAGCGTAAGTTGCTCAGGATTTGGATGGACATCAGAGATCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
||
| CDS-3UTR GCA 90 bp | CTGATCTCTGATGTCCATCCAAATCCTGAGCAACTTACGCTTAAAACAATGAACGGGACGAGACAAGCTTaGTTTGAGATCAAATACTGG | + |
|
Preference number: 4 (lower is better) Translates to: LISDVHPNPEQLTLKTMNGTRQA*FEIKYW Trigger: CCAGTATTTGATCTCAAAGCAAGCTTGTCTCGTCCC...GTTCATTGTTTTAAGCGTAAGTTGCTCAGGATTTGGATGGACATCAGAGATCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
||
| CDS-3UTR GCA 90 bp | AAGCATTACACACATCTCAGAATCTCTGTAAGGCAGAGCAAAGATCAGAAGGTCTTCTCCTTTCGTTCTTaGTCTTGTCTCTTCCATCGT | + |
|
Preference number: 4 (lower is better) Translates to: KHYTHLRISVRQSKDQKVFSFRS*SCLFHR Trigger: ACGATGGAAGAGACAAGAGCAAGAACGAAAGGAGAA...GACCTTCTGATCTTTGCTCTGCCTTACAGAGATTCTGAGATGTGTGTAATGCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
||
| CDS-3UTR GCA 90 bp | TCTTATTTTCTCATGCTAAGATTCTGCTACAGCTTGTGCAGAAAAGGGTGCAGGTTCTCCTTTCGTTCTTaGTCTTGTCTCTTCCATCGT | + |
|
Preference number: 4 (lower is better) Translates to: SYFLMLRFCYSLCRKGCRFSFRS*SCLFHR Trigger: ACGATGGAAGAGACAAGAGCAAGAACGAAAGGAGAA...CCTGCACCCTTTTCTGCACAAGCTGTAGCAGAATCTTAGCATGAGAAAATAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
||
| CDS-3UTR TCA 90 bp | TTTGGTTTTGGTGGTACAGTTCAGGGACAGGAGTGTGATAGACAAGTGTTGTACTTAAAACGAGCCTCATaGAGCTTCTTAAAGTTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: FGFGGTVQGQECDRQVLYLKRAS*SFLKFG Trigger: ACCAAACTTTAAGAAGCTTCATGAGGCTCGTTTTAA...GTACAACACTTGTCTATCACACTCCTGTCCCTGAACTGTACCACCAAAACCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068225.15 |
||
| CDS-3UTR TCA 90 bp | CCTTTTCCTATGAGCGATATCTTATTTTCTCATGCTAAGATTCTGCTACAGCTTCCTTTCATCTCCAAATaGTCCTGCAACAAAGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PFPMSDILFSHAKILLQLPFISK*SCNKVW Trigger: CCAGACTTTGTTGCAGGATCATTTGGAGATGAAAGG...AAGCTGTAGCAGAATCTTAGCATGAGAAAATAAGATATCGCTCATAGGAAAAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
||
| CDS-3UTR TCA 90 bp | CCTTTTCCTATGAGCGATATCTTATTTTCTCATGCTAAGATTCTGCTACAGCTTTGGTGTCTTGGTCAGTaGGCACTTATGTTCATTGTC | + |
|
Preference number: 4 (lower is better) Translates to: PFPMSDILFSHAKILLQLWCLGQ*ALMFIV Trigger: GACAATGAACATAAGTGCTCACTGACCAAGACACCA...AAGCTGTAGCAGAATCTTAGCATGAGAAAATAAGATATCGCTCATAGGAAAAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
||
| CDS-3UTR GCA 90 bp | TCTTATTTTCTCATGCTAAGATTCTGCTACAGCTTGTGCAGAAAAGGGTGCAGGGAAAGGGGTAATAACTaGAATAGAAGTCCTTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SYFLMLRFCYSLCRKGCRERGNN*NRSPFS Trigger: ACTGAAAGGACTTCTATTGCAGTTATTACCCCTTTC...CCTGCACCCTTTTCTGCACAAGCTGTAGCAGAATCTTAGCATGAGAAAATAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
||
| CDS-3UTR CCA 90 bp | CCTTTTCCTATGAGCGATATCTTATTTTCTCATGCTAAGATTCTGCTACAGCTTCTTCTGCTGTATCCCTaGGGTCTTGATTTTCCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: PFPMSDILFSHAKILLQLLLLYP*GLDFPD Trigger: ATCAGGAAAATCAAGACCCCAGGGATACAGCAGAAG...AAGCTGTAGCAGAATCTTAGCATGAGAAAATAAGATATCGCTCATAGGAAAAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
||
| CDS-3UTR CCA 90 bp | CTGATCTCTGATGTCCATCCAAATCCTGAGCAACTTACGCTTAAAACAATGAACCTTCTTACTAGAACTTaGAGTCTGTGTTGCTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LISDVHPNPEQLTLKTMNLLTRT*SLCCFS Trigger: ACTGAAGCAACACAGACTCCAAGTTCTAGTAAGAAG...GTTCATTGTTTTAAGCGTAAGTTGCTCAGGATTTGGATGGACATCAGAGATCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
||
| CDS-3UTR CCA 90 bp | TTGGTTTTGGTGGTACAGTTCAGGGACAGGAGTGTGATAGACAAGTGTTGTACATTTGAGATCAAATACTaGCTTCTTACTAGAACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LVLVVQFRDRSVIDKCCTFEIKY*LLTRTW Trigger: CCAAGTTCTAGTAAGAAGCCAGTATTTGATCTCAAA...TGTACAACACTTGTCTATCACACTCCTGTCCCTGAACTGTACCACCAAAACCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
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| CDS-3UTR GCA 90 bp | GCTTTGAGATTTCAAAAAGTCCTGGTCATTCGTTTTTCTCTCTGCTTATTTGTGGAAAGGGGTAATAACTaGAATAGAAGTCCTTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: ALRFQKVLVIRFSLCLFVERGNN*NRSPFS Trigger: ACTGAAAGGACTTCTATTGCAGTTATTACCCCTTTC...CACAAATAAGCAGAGAGAAAAACGAATGACCAGGACTTTTTGAAATCTCAAAGC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000028771.8 |
||
| CDS-3UTR CCA 90 bp | CCTTTTCCTATGAGCGATATCTTATTTTCTCATGCTAAGATTCTGCTACAGCTTTTTGAGATCAAATACTaGCTTCTTACTAGAACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PFPMSDILFSHAKILLQLFEIKY*LLTRTW Trigger: CCAAGTTCTAGTAAGAAGCCAGTATTTGATCTCAAA...AAGCTGTAGCAGAATCTTAGCATGAGAAAATAAGATATCGCTCATAGGAAAAGG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
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| CDS GCA 90 bp | TCTGCCTTCATGTTAGCCCGGAGGCCCAGCCTTTTGGCTAAATTTTaGAGGTCGCTGTACTTAAAGGAGTCCAGCTCCTCTGCAGAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SAFMLARRPSLLAKF*RSLYLKESSSSAEG Trigger: CCCCTCTGCAGAGGAGCTGGACTCCTTTAAGTACAGCGACCTGCAAAATTTAGCCAAAAGGCTGGGCCTCCGGGCTAACATGAAGGCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
||
| CDS TCA 90 bp | GTGCTTCTTCCTCCTCCTCCTCCTCGTTTTGGTGACGTGACCACCTaGTTCCGTCTCAGCTTGCTCCTCACTGCTAACGTGTATCTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: VLLPPPPPRFGDVTT*FRLSLLLTANVYLS Trigger: ACTGAGATACACGTTAGCAGTGAGGAGCAAGCTGAGACGGAATCAGGTGGTCACGTCACCAAAACGAGGAGGAGGAGGAGGAAGAAGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
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| CDS TCA 90 bp | ACGAGCCTCATGAAGCTTCTTAAAGTCATTTACTTCTCCTTCTCCTaGAGAAGCCGCATTGCCGTCCTCTGGCCTCTGCTCCGGCAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: TSLMKLLKVIYFSFS*RSRIAVLWPLLRQR Trigger: TCTCTGCCGGAGCAGAGGCCAGAGGACGGCAATGCGGCTTCTTCAGGAGAAGGAGAAGTAAATGACTTTAAGAAGCTTCATGAGGCTCGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028771.8 |
||
| CDS CCA 90 bp | TCTTTAGTAGCAGCTGAAAACCTGACATTCATTTTAGTTGCTGAGTaGCCTTGTGGGCACTGCTGCCTGGCAGGAGTACAGGGTACAGAG | + |
|
Preference number: 5 (lower is better) Translates to: SLVAAENLTFILVAE*PCGHCCLAGVQGTE Trigger: CTCTGTACCCTGTACTCCTGCCAGGCAGCAGTGCCCACAAGGCCACTCAGCAACTAAAATGAATGTCAGGTTTTCAGCTGCTACTAAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
||
| CDS-3UTR CAA 90 bp | GGTTTTGGTGGTACAGTTCAGGGACAGGAGTGTGATAGACAAGTGTTGTACAACCGGAGGCCCAGCCTTTaGGCTAAATTTTGCAGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: GFGGTVQGQECDRQVLYNRRPSL*AKFCRS Trigger: CGACCTGCAAAATTTAGCCAAAAGGCTGGGCCTCCG...GTTGTACAACACTTGTCTATCACACTCCTGTCCCTGAACTGTACCACCAAAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
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| CDS-3UTR CAA 90 bp | AAGTGGATGGAGGAGGTGTGTTTACTGATCTCTGATGTCCATCCAAATCCTGAGCAGAGAGCCTTCCTCTaGGAGGAACTGGGGTCACTA | + |
|
Preference number: 5 (lower is better) Translates to: KWMEEVCLLISDVHPNPEQRAFL*EELGSL Trigger: TAGTGACCCCAGTTCCTCCAAGAGGAAGGCTCTCTG...CTCAGGATTTGGATGGACATCAGAGATCAGTAAACACACCTCCTCCATCCACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
||
| CDS-3UTR CAA 90 bp | GTATGGTGGTATACATCTAACTCTGCACTCACCTGGGAGGTAGAGGCTGGGGGATCGTTCTTCCCTGGTTaGGAGATGAGGTTGTTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: VWWYTSNSALTWEVEAGGSFFPG*EMRLFV Trigger: TACAAACAACCTCATCTCCAAACCAGGGAAGAACGA...TCCCCCAGCCTCTACCTCCCAGGTGAGTGCAGAGTTAGATGTATACCACCATAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
||
| CDS-3UTR CAA 90 bp | CATTACACACATCTCAGAATCTCTGTAAGGCAGAGCAAAGATCAGAAGGTCACCCGGAGGCCCAGCCTTTaGGCTAAATTTTGCAGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: HYTHLRISVRQSKDQKVTRRPSL*AKFCRS Trigger: CGACCTGCAAAATTTAGCCAAAAGGCTGGGCCTCCG...GGTGACCTTCTGATCTTTGCTCTGCCTTACAGAGATTCTGAGATGTGTGTAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
||
| CDS-3UTR CAA 90 bp | TTTGGTTTTGGTGGTACAGTTCAGGGACAGGAGTGTGATAGACAAGTGTTGTACCAGAGAGCCTTCCTCTaGGAGGAACTGGGGTCACTA | + |
|
Preference number: 5 (lower is better) Translates to: FGFGGTVQGQECDRQVLYQRAFL*EELGSL Trigger: TAGTGACCCCAGTTCCTCCAAGAGGAAGGCTCTCTG...GTACAACACTTGTCTATCACACTCCTGTCCCTGAACTGTACCACCAAAACCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
||
| CDS-3UTR CAA 90 bp | GGTGCAGGTCATCTCCCTCGGAACTATCAGGACCTTGACATGAAAAACCTCTGTCGAGACAAGCTTGCTTaGAGATCAAATACTGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: GAGHLPRNYQDLDMKNLCRDKLA*RSNTGF Trigger: GAAGCCAGTATTTGATCTCAAAGCAAGCTTGTCTCG...ACAGAGGTTTTTCATGTCAAGGTCCTGATAGTTCCGAGGGAGATGACCTGCACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
||
| CDS-3UTR CAA 90 bp | GGTGCAGGTCATCTCCCTCGGAACTATCAGGACCTTGACATGAAAAACCTCTGTTCGTTCTTCCCTGGTTaGGAGATGAGGTTGTTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: GAGHLPRNYQDLDMKNLCSFFPG*EMRLFV Trigger: TACAAACAACCTCATCTCCAAACCAGGGAAGAACGA...ACAGAGGTTTTTCATGTCAAGGTCCTGATAGTTCCGAGGGAGATGACCTGCACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
||
| CDS-3UTR CAA 90 bp | GGTGCAGGTCATCTCCCTCGGAACTATCAGGACCTTGACATGAAAAACCTCTGTAAGGCTTTTAACAACTaGTCTGCCTTCATGTTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: GAGHLPRNYQDLDMKNLCKAFNN*SAFMLA Trigger: GGCTAACATGAAGGCAGACAAGTTGTTAAAAGCCTT...ACAGAGGTTTTTCATGTCAAGGTCCTGATAGTTCCGAGGGAGATGACCTGCACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
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| CDS-3UTR CAA 90 bp | GGTGCAGGTCATCTCCCTCGGAACTATCAGGACCTTGACATGAAAAACCTCTGTGCTTCAGTCATCAACTaGAAAGGGGTAATAACTGCA | + |
|
Preference number: 5 (lower is better) Translates to: GAGHLPRNYQDLDMKNLCASVIN*KGVITA Trigger: TGCAGTTATTACCCCTTTCAAGTTGATGACTGAAGC...ACAGAGGTTTTTCATGTCAAGGTCCTGATAGTTCCGAGGGAGATGACCTGCACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
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| CDS-3UTR CAA 90 bp | CCCTGTCTCAACAGTTGTGGAAGACAAGTGGATGGAGGAGGTGTGTTTACTGATCTTTCGTTCTTGCTCTaGTCTCTTCCATCGTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PCLNSCGRQVDGGGVFTDLSFLL*SLPSFF Trigger: GAAGAACGATGGAAGAGACAAGAGCAAGAACGAAAG...ATCAGTAAACACACCTCCTCCATCCACTTGTCTTCCACAACTGTTGAGACAGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
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| CDS GCA 90 bp | CAGCTTTCCTTTGTGTGGCTTGTAGTTGAGGGGACGAGACAAGCTTaGTTTGAGATCAAATACTGGCTTCTTACTAGAACTTGGAGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: QLSFVWLVVEGTRQA*FEIKYWLLTRTWSL Trigger: CAGACTCCAAGTTCTAGTAAGAAGCCAGTATTTGATCTCAAAGCAAGCTTGTCTCGTCCCCTCAACTACAAGCCACACAAAGGAAAGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
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| CDS-3UTR CAA 90 bp | TCTTATTTTCTCATGCTAAGATTCTGCTACAGCTTGTGCAGAAAAGGGTGCAGGATTCCATGGATGGTCTaGTGCTTCTTCCTCCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SYFLMLRFCYSLCRKGCRIPWMV*CFFLLL Trigger: GAGGAGGAGGAAGAAGCACAAGACCATCCATGGAAT...CCTGCACCCTTTTCTGCACAAGCTGTAGCAGAATCTTAGCATGAGAAAATAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
||
| CDS-3UTR CAA 90 bp | TTGGTTTTGGTGGTACAGTTCAGGGACAGGAGTGTGATAGACAAGTGTTGTACATTTCTGGCTGGTGTCTaGGTCAGTGAGCACTTATGT | + |
|
Preference number: 5 (lower is better) Translates to: LVLVVQFRDRSVIDKCCTFLAGV*VSEHLC Trigger: ACATAAGTGCTCACTGACCAAGACACCAGCCAGAAA...TGTACAACACTTGTCTATCACACTCCTGTCCCTGAACTGTACCACCAAAACCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
||
| CDS-3UTR CAA 90 bp | TTGGTTTTGGTGGTACAGTTCAGGGACAGGAGTGTGATAGACAAGTGTTGTACACTTCTCCTTTCGTTCTaGCTCTTGTCTCTTCCATCG | + |
|
Preference number: 5 (lower is better) Translates to: LVLVVQFRDRSVIDKCCTLLLSF*LLSLPS Trigger: CGATGGAAGAGACAAGAGCAAGAACGAAAGGAGAAG...TGTACAACACTTGTCTATCACACTCCTGTCCCTGAACTGTACCACCAAAACCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
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| CDS CCA 90 bp | ATTGTTCTCTTTAGCTTGTCCCCAAGGTTTCAGCTTTCCTTTGTGTaGCTTGTAGTTGAGGGGACGAGACAAGCTTGCTTTGAGATCAAA | + |
|
Preference number: 5 (lower is better) Translates to: IVLFSLSPRFQLSFV*LVVEGTRQACFEIK Trigger: TTTGATCTCAAAGCAAGCTTGTCTCGTCCCCTCAACTACAAGCCACACAAAGGAAAGCTGAAACCTTGGGGACAAGCTAAAGAGAACAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
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| CDS-3UTR CAA 90 bp | TCTTATTTTCTCATGCTAAGATTCTGCTACAGCTTGTGCAGAAAAGGGTGCAGGTTTCTGGCTGGTGTCTaGGTCAGTGAGCACTTATGT | + |
|
Preference number: 5 (lower is better) Translates to: SYFLMLRFCYSLCRKGCRFLAGV*VSEHLC Trigger: ACATAAGTGCTCACTGACCAAGACACCAGCCAGAAA...CCTGCACCCTTTTCTGCACAAGCTGTAGCAGAATCTTAGCATGAGAAAATAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
||
| CDS-3UTR CAA 90 bp | TTGGTTTTGGTGGTACAGTTCAGGGACAGGAGTGTGATAGACAAGTGTTGTACACGAGACAAGCTTGCTTaGAGATCAAATACTGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LVLVVQFRDRSVIDKCCTRDKLA*RSNTGF Trigger: GAAGCCAGTATTTGATCTCAAAGCAAGCTTGTCTCG...TGTACAACACTTGTCTATCACACTCCTGTCCCTGAACTGTACCACCAAAACCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
||
| CDS-3UTR CAA 90 bp | TTTGGTTTTGGTGGTACAGTTCAGGGACAGGAGTGTGATAGACAAGTGTTGTACCGTTCGTTCAGAGAATaGTTCTCTTTAGCTTGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: FGFGGTVQGQECDRQVLYRSFRE*FSLACP Trigger: GGGACAAGCTAAAGAGAACAATTCTCTGAACGAACG...GTACAACACTTGTCTATCACACTCCTGTCCCTGAACTGTACCACCAAAACCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
||
| CDS-3UTR CAA 90 bp | TTGGTTTTGGTGGTACAGTTCAGGGACAGGAGTGTGATAGACAAGTGTTGTACACTTTCGTTCTTGCTCTaGTCTCTTCCATCGTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LVLVVQFRDRSVIDKCCTLSFLL*SLPSFF Trigger: GAAGAACGATGGAAGAGACAAGAGCAAGAACGAAAG...TGTACAACACTTGTCTATCACACTCCTGTCCCTGAACTGTACCACCAAAACCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
||
| CDS-3UTR CAA 90 bp | GGTGCAGGTCATCTCCCTCGGAACTATCAGGACCTTGACATGAAAAACCTCTGTGCTGAAGTCCTTTTATaGTTCCCAAGTTTAGAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: GAGHLPRNYQDLDMKNLCAEVLL*FPSLEN Trigger: GTTTTCTAAACTTGGGAACAATAAAAGGACTTCAGC...ACAGAGGTTTTTCATGTCAAGGTCCTGATAGTTCCGAGGGAGATGACCTGCACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000068225.15 |
||
| CDS CCA 90 bp | CTTGTAGTTGAGGGGACGAGACAAGCTTGCTTTGAGATCAAATACTaGCTTCTTACTAGAACTTGGAGTCTGTGTTGCTTCAGTCATCAA | + |
|
Preference number: 5 (lower is better) Translates to: LVVEGTRQACFEIKY*LLTRTWSLCCFSHQ Trigger: TTGATGACTGAAGCAACACAGACTCCAAGTTCTAGTAAGAAGCCAGTATTTGATCTCAAAGCAAGCTTGTCTCGTCCCCTCAACTACAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
||
| CDS-3UTR CAA 90 bp | GTGAGCTGCCTGACTTGGGTCCTAAAAATTAAAGAGTCCTTTGCAAGAGAACCTATTGTTCTCTTTAGCTaGTCCCCAAGGTTTCAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: VSCLTWVLKIKESFAREPIVLFS*SPRFQL Trigger: AAGCTGAAACCTTGGGGACAAGCTAAAGAGAACAAT...AGGTTCTCTTGCAAAGGACTCTTTAATTTTTAGGACCCAAGTCAGGCAGCTCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028771.8 |
||
| CDS-3UTR CAA 90 bp | TTTGGTTTTGGTGGTACAGTTCAGGGACAGGAGTGTGATAGACAAGTGTTGTACATTGTTCTCTTTAGCTaGTCCCCAAGGTTTCAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: FGFGGTVQGQECDRQVLYIVLFS*SPRFQL Trigger: AAGCTGAAACCTTGGGGACAAGCTAAAGAGAACAAT...GTACAACACTTGTCTATCACACTCCTGTCCCTGAACTGTACCACCAAAACCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
||
| CDS-3UTR CAA 90 bp | GTGAGCTGCCTGACTTGGGTCCTAAAAATTAAAGAGTCCTTTGCAAGAGAACCTGGTTTGGAGATGAGGTaGTTTGTAAGTTTTCCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: VSCLTWVLKIKESFAREPGLEMR*FVSFPV Trigger: CACAGGAAAACTTACAAACAACCTCATCTCCAAACC...AGGTTCTCTTGCAAAGGACTCTTTAATTTTTAGGACCCAAGTCAGGCAGCTCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028771.8 |
||
| CDS-3UTR CAA 90 bp | CATTACACACATCTCAGAATCTCTGTAAGGCAGAGCAAAGATCAGAAGGTCACCGGTTTGGAGATGAGGTaGTTTGTAAGTTTTCCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: HYTHLRISVRQSKDQKVTGLEMR*FVSFPV Trigger: CACAGGAAAACTTACAAACAACCTCATCTCCAAACC...GGTGACCTTCTGATCTTTGCTCTGCCTTACAGAGATTCTGAGATGTGTGTAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
||
| CDS-3UTR CAA 90 bp | TCTTATTTTCTCATGCTAAGATTCTGCTACAGCTTGTGCAGAAAAGGGTGCAGGAAGGCTTTTAACAACTaGTCTGCCTTCATGTTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: SYFLMLRFCYSLCRKGCRKAFNN*SAFMLA Trigger: GGCTAACATGAAGGCAGACAAGTTGTTAAAAGCCTT...CCTGCACCCTTTTCTGCACAAGCTGTAGCAGAATCTTAGCATGAGAAAATAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
||
| CDS-3UTR CAA 90 bp | TCTTATTTTCTCATGCTAAGATTCTGCTACAGCTTGTGCAGAAAAGGGTGCAGGGCTTCAGTCATCAACTaGAAAGGGGTAATAACTGCA | + |
|
Preference number: 5 (lower is better) Translates to: SYFLMLRFCYSLCRKGCRASVIN*KGVITA Trigger: TGCAGTTATTACCCCTTTCAAGTTGATGACTGAAGC...CCTGCACCCTTTTCTGCACAAGCTGTAGCAGAATCTTAGCATGAGAAAATAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
||
| CDS-3UTR CAA 90 bp | GCTTTGAGATTTCAAAAAGTCCTGGTCATTCGTTTTTCTCTCTGCTTATTTGTGCTTCTCCTTTCGTTCTaGCTCTTGTCTCTTCCATCG | + |
|
Preference number: 5 (lower is better) Translates to: ALRFQKVLVIRFSLCLFVLLLSF*LLSLPS Trigger: CGATGGAAGAGACAAGAGCAAGAACGAAAGGAGAAG...CACAAATAAGCAGAGAGAAAAACGAATGACCAGGACTTTTTGAAATCTCAAAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000028771.8 |
||
| CDS CCA 90 bp | AGACAAGCTTGCTTTGAGATCAAATACTGGCTTCTTACTAGAACTTaGAGTCTGTGTTGCTTCAGTCATCAACTTGAAAGGGGTAATAAC | + |
|
Preference number: 5 (lower is better) Translates to: RQACFEIKYWLLTRT*SLCCFSHQLERGNN Trigger: GTTATTACCCCTTTCAAGTTGATGACTGAAGCAACACAGACTCCAAGTTCTAGTAAGAAGCCAGTATTTGATCTCAAAGCAAGCTTGTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
||
| CDS GCA 90 bp | TTTGAGATCAAATACTGGCTTCTTACTAGAACTTGGAGTCTGTGTTaGTTCAGTCATCAACTTGAAAGGGGTAATAACTGCAATAGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: FEIKYWLLTRTWSLC*FSHQLERGNNCNRS Trigger: ACTTCTATTGCAGTTATTACCCCTTTCAAGTTGATGACTGAAGCAACACAGACTCCAAGTTCTAGTAAGAAGCCAGTATTTGATCTCAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
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| CDS GCA 72 bp | TCTCCTGAAGAAGCCGCATTGCCGTCCTCTGGCCTCTaGTCCGGCAGAGAAGGAACTTCTGCTGTATCCCTG | + |
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Preference number: 6 (lower is better) Translates to: SPEEAALPSSGL*SGREGTSAVSL Trigger: CAGGGATACAGCAGAAGTTCCTTCTCTGCCGGAGCAGAGGCCAGAGGACGGCAATGCGGCTTCTTCAGGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
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| CDS TCA 72 bp | CCTCCTCCTCCTCCTCGTTTTGGTGACGTGACCACCTaGTTCCGTCTCAGCTTGCTCCTCACTGCTAACGTG | + |
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Preference number: 6 (lower is better) Translates to: PPPPPRFGDVTT*FRLSLLLTANV Trigger: CACGTTAGCAGTGAGGAGCAAGCTGAGACGGAATCAGGTGGTCACGTCACCAAAACGAGGAGGAGGAGGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
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| CDS TCA 72 bp | TGCTTCTTCCTCCTCCTCCTCCTCGTTTTGGTGACGTaGCCACCTGATTCCGTCTCAGCTTGCTCCTCACTG | + |
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Preference number: 6 (lower is better) Translates to: CFFLLLLLVLVT*PPDSVSACSSL Trigger: CAGTGAGGAGCAAGCTGAGACGGAATCAGGTGGTCACGTCACCAAAACGAGGAGGAGGAGGAGGAAGAAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
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| CDS GCA 72 bp | AGTCATTTACTTCTCCTTCTCCTGAAGAAGCCGCATTaGCGTCCTCTGGCCTCTGCTCCGGCAGAGAAGGAA | + |
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Preference number: 6 (lower is better) Translates to: SHLLLLLLKKPH*RPLASAPAEKE Trigger: TTCCTTCTCTGCCGGAGCAGAGGCCAGAGGACGGCAATGCGGCTTCTTCAGGAGAAGGAGAAGTAAATGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028771.8 |
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| CDS GCA 72 bp | TTCATTTTAGTTGCTGAGTGGCCTTGTGGGCACTGCTaGCTGGCAGGAGTACAGGGTACAGAGAGCCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: FILVAEWPCGHC*LAGVQGTESLP Trigger: AGGAAGGCTCTCTGTACCCTGTACTCCTGCCAGGCAGCAGTGCCCACAAGGCCACTCAGCAACTAAAATGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
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| CDS GCA 72 bp | TGTCATTTACTTCTCCTTCTCCTGAAGAAGCCGCATTaGCGTCCTCTGGCCTCTGCTCCGGCAGAGAAGGAA | + |
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Preference number: 6 (lower is better) Translates to: CHLLLLLLKKPH*RPLASAPAEKE Trigger: TTCCTTCTCTGCCGGAGCAGAGGCCAGAGGACGGCAATGCGGCTTCTTCAGGAGAAGGAGAAGTAAATGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068225.15 |
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| CDS CAA 72 bp | AAGTCATTTACTTCTCCTTCTCCTGAAGAAGCCGCATaGCCGTCCTCTGGCCTCTGCTCCGGCAGAGAAGGA | + |
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Preference number: 6 (lower is better) Translates to: KSFTSPSPEEAA*PSSGLCSGREG Trigger: TCCTTCTCTGCCGGAGCAGAGGCCAGAGGACGGCAATGCGGCTTCTTCAGGAGAAGGAGAAGTAAATGACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028771.8 |
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| CDS CAA 72 bp | ATGTCATTTACTTCTCCTTCTCCTGAAGAAGCCGCATaGCCGTCCTCTGGCCTCTGCTCCGGCAGAGAAGGA | + |
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Preference number: 6 (lower is better) Translates to: MSFTSPSPEEAA*PSSGLCSGREG Trigger: TCCTTCTCTGCCGGAGCAGAGGCCAGAGGACGGCAATGCGGCTTCTTCAGGAGAAGGAGAAGTAAATGACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068225.15 |
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| CDS CCA 72 bp | GCAGCTGAAAACCTGACATTCATTTTAGTTGCTGAGTaGCCTTGTGGGCACTGCTGCCTGGCAGGAGTACAG | + |
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Preference number: 6 (lower is better) Translates to: AAENLTFILVAE*PCGHCCLAGVQ Trigger: CTGTACTCCTGCCAGGCAGCAGTGCCCACAAGGCCACTCAGCAACTAAAATGAATGTCAGGTTTTCAGCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
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| CDS GCA 72 bp | ATGTTAGCCCGGAGGCCCAGCCTTTTGGCTAAATTTTaGAGGTCGCTGTACTTAAAGGAGTCCAGCTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: MLARRPSLLAKF*RSLYLKESSSS Trigger: AGAGGAGCTGGACTCCTTTAAGTACAGCGACCTGCAAAATTTAGCCAAAAGGCTGGGCCTCCGGGCTAACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
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| CDS CAA 90 bp | GCACTCCCAGGTGCAGTCACGTGTGGAGACTTTCTGGCTGGTGTCTaGGTCAGTGAGCACTTATGTTCATTGTCTTTAGTAGCAGCTGAA | + |
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Preference number: 6 (lower is better) Translates to: ALPGAVTCGDFLAGV*VSEHLCSLSLVAAE Trigger: TTCAGCTGCTACTAAAGACAATGAACATAAGTGCTCACTGACCAAGACACCAGCCAGAAAGTCTCCACACGTGACTGCACCTGGGAGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
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| CDS CAA 90 bp | GAATCTTTAATGTCATTTACTTCTCCTTCTCCTGAAGAAGCCGCATaGCCGTCCTCTGGCCTCTGCTCCGGCAGAGAAGGAACTTCTGCT | + |
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Preference number: 6 (lower is better) Translates to: ESLMSFTSPSPEEAA*PSSGLCSGREGTSA Trigger: AGCAGAAGTTCCTTCTCTGCCGGAGCAGAGGCCAGAGGACGGCAATGCGGCTTCTTCAGGAGAAGGAGAAGTAAATGACATTAAAGATTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068225.15 |
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| CDS CAA 72 bp | AACAAAGTCTGGGAGGTAGGAATTCCATGGATGGTCTaGTGCTTCTTCCTCCTCCTCCTCCTCGTTTTGGTG | + |
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Preference number: 6 (lower is better) Translates to: NKVWEVGIPWMV*CFFLLLLLVLV Trigger: CACCAAAACGAGGAGGAGGAGGAGGAAGAAGCACAAGACCATCCATGGAATTCCTACCTCCCAGACTTTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
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| CDS CAA 90 bp | TTTAACAACTTGTCTGCCTTCATGTTAGCCCGGAGGCCCAGCCTTTaGGCTAAATTTTGCAGGTCGCTGTACTTAAAGGAGTCCAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: FNNLSAFMLARRPSL*AKFCRSLYLKESSS Trigger: GGAGCTGGACTCCTTTAAGTACAGCGACCTGCAAAATTTAGCCAAAAGGCTGGGCCTCCGGGCTAACATGAAGGCAGACAAGTTGTTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
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| CDS CCA 72 bp | TTTAGCTTGTCCCCAAGGTTTCAGCTTTCCTTTGTGTaGCTTGTAGTTGAGGGGACGAGACAAGCTTGCTTT | + |
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Preference number: 6 (lower is better) Translates to: FSLSPRFQLSFV*LVVEGTRQACF Trigger: AAAGCAAGCTTGTCTCGTCCCCTCAACTACAAGCCACACAAAGGAAAGCTGAAACCTTGGGGACAAGCTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
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| CDS CAA 72 bp | GGTGCAGTCACGTGTGGAGACTTTCTGGCTGGTGTCTaGGTCAGTGAGCACTTATGTTCATTGTCTTTAGTA | + |
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Preference number: 6 (lower is better) Translates to: GAVTCGDFLAGV*VSEHLCSLSLV Trigger: TACTAAAGACAATGAACATAAGTGCTCACTGACCAAGACACCAGCCAGAAAGTCTCCACACGTGACTGCACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
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| CDS CCA 72 bp | GAGGGGACGAGACAAGCTTGCTTTGAGATCAAATACTaGCTTCTTACTAGAACTTGGAGTCTGTGTTGCTTC | + |
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Preference number: 6 (lower is better) Translates to: EGTRQACFEIKY*LLTRTWSLCCF Trigger: GAAGCAACACAGACTCCAAGTTCTAGTAAGAAGCCAGTATTTGATCTCAAAGCAAGCTTGTCTCGTCCCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
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| CDS CAA 90 bp | GGTAACTCTGCTTACACGTTCGTTCAGAGAATTGTTCTCTTTAGCTaGTCCCCAAGGTTTCAGCTTTCCTTTGTGTGGCTTGTAGTTGAG | + |
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Preference number: 6 (lower is better) Translates to: GNSAYTFVQRIVLFS*SPRFQLSFVWLVVE Trigger: CTCAACTACAAGCCACACAAAGGAAAGCTGAAACCTTGGGGACAAGCTAAAGAGAACAATTCTCTGAACGAACGTGTAAGCAGAGTTACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
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| CDS CAA 90 bp | TTGCTCTTGTCTCTTCCATCGTTCTTCCCTGGTTTGGAGATGAGGTaGTTTGTAAGTTTTCCTGTGGAAGGTAACTCTGCTTACACGTTC | + |
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Preference number: 6 (lower is better) Translates to: LLLSLPSFFPGLEMR*FVSFPVEGNSAYTF Trigger: GAACGTGTAAGCAGAGTTACCTTCCACAGGAAAACTTACAAACAACCTCATCTCCAAACCAGGGAAGAACGATGGAAGAGACAAGAGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
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| CDS CAA 72 bp | TCTCTTCCATCGTTCTTCCCTGGTTTGGAGATGAGGTaGTTTGTAAGTTTTCCTGTGGAAGGTAACTCTGCT | + |
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Preference number: 6 (lower is better) Translates to: SLPSFFPGLEMR*FVSFPVEGNSA Trigger: AGCAGAGTTACCTTCCACAGGAAAACTTACAAACAACCTCATCTCCAAACCAGGGAAGAACGATGGAAGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
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| CDS GCA 72 bp | TTTGTGTGGCTTGTAGTTGAGGGGACGAGACAAGCTTaGTTTGAGATCAAATACTGGCTTCTTACTAGAACT | + |
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Preference number: 6 (lower is better) Translates to: FVWLVVEGTRQA*FEIKYWLLTRT Trigger: AGTTCTAGTAAGAAGCCAGTATTTGATCTCAAAGCAAGCTTGTCTCGTCCCCTCAACTACAAGCCACACAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
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| CDS CAA 72 bp | TTCTTGCTCTTGTCTCTTCCATCGTTCTTCCCTGGTTaGGAGATGAGGTTGTTTGTAAGTTTTCCTGTGGAA | + |
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Preference number: 6 (lower is better) Translates to: FLLLSLPSFFPG*EMRLFVSFPVE Trigger: TTCCACAGGAAAACTTACAAACAACCTCATCTCCAAACCAGGGAAGAACGATGGAAGAGACAAGAGCAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
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| CDS CAA 90 bp | GGCTTCTTACTAGAACTTGGAGTCTGTGTTGCTTCAGTCATCAACTaGAAAGGGGTAATAACTGCAATAGAAGTCCTTTCAGTGGCCTTT | + |
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Preference number: 6 (lower is better) Translates to: GFLLELGVCVASVIN*KGVITAIEVLSVAF Trigger: AAAGGCCACTGAAAGGACTTCTATTGCAGTTATTACCCCTTTCAAGTTGATGACTGAAGCAACACAGACTCCAAGTTCTAGTAAGAAGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
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| CDS TCA 72 bp | TGGAAGTTACTACTATCAGTTCCTTTCATCTCCAAATaGTCCTGCAACAAAGTCTGGGAGGTAGGAATTCCA | + |
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Preference number: 6 (lower is better) Translates to: WKLLLSVPFISK*SCNKVWEVGIP Trigger: TGGAATTCCTACCTCCCAGACTTTGTTGCAGGATCATTTGGAGATGAAAGGAACTGATAGTAGTAACTTCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
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| CDS CAA 72 bp | CTTCCTCTTGGAGGAACTGGGGTCACTATCCCTTTTTaGTCAAGCTTTAGTTCATTAAGTGAACTGTGTTCT | + |
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Preference number: 6 (lower is better) Translates to: LPLGGTGVTIPF*SSFSSLSELCS Trigger: AGAACACAGTTCACTTAATGAACTAAAGCTTGACAAAAAAGGGATAGTGACCCCAGTTCCTCCAAGAGGAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
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| CDS GCA 72 bp | AAATACTGGCTTCTTACTAGAACTTGGAGTCTGTGTTaGTTCAGTCATCAACTTGAAAGGGGTAATAACTGC | + |
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Preference number: 6 (lower is better) Translates to: KYWLLTRTWSLC*FSHQLERGNNC Trigger: GCAGTTATTACCCCTTTCAAGTTGATGACTGAAGCAACACAGACTCCAAGTTCTAGTAAGAAGCCAGTATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028771.8 ENSMUST00000068225.15 |
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| CDS TCA 72 bp | AGCCTCATGAAGCTTCTTAAAGTTTGGTGTTGTGGCTaGAGTCCTTTTATTGTTCCCAAGTTTAGAAAACTC | + |
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Preference number: 6 (lower is better) Translates to: SLMKLLKVWCCG*SPFIVPKFRKL Trigger: GAGTTTTCTAAACTTGGGAACAATAAAAGGACTTCAGCCACAACACCAAACTTTAAGAAGCTTCATGAGGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068225.15 |
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| CDS TCA 72 bp | TCATCAATGGATTCCATTTTCTTAAAACGAGCCTCATaGAGCTTCTTAAAGTTTGGTGTTGTGGCTGAAGTC | + |
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Preference number: 6 (lower is better) Translates to: SSMDSIFLKRAS*SFLKFGVVAEV Trigger: GACTTCAGCCACAACACCAAACTTTAAGAAGCTTCATGAGGCTCGTTTTAAGAAAATGGAATCCATTGATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068225.15 |
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| CDS CAA 72 bp | TTCTTAAAGTTTGGTGTTGTGGCTGAAGTCCTTTTATaGTTCCCAAGTTTAGAAAACTCATCCGTGCATAGA | + |
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Preference number: 6 (lower is better) Translates to: FLKFGVVAEVLL*FPSLENSSVHR Trigger: TCTATGCACGGATGAGTTTTCTAAACTTGGGAACAATAAAAGGACTTCAGCCACAACACCAAACTTTAAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068225.15 |
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