Pregenerated sensors for NUPL2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048439Ensembl transcript IDs: ENSMUST00000049887.13, ENSMUST00000115101.4
Found 138 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATGCAGCAGACGTGGCTTCAGGTTTCCCAAGTCCAAAGGCTGGAGTaGAGGAAGAGATGGAGGAGCCCGCAGAGGGCCCAGCCCCAAAGG | + |
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Preference number: 1 (lower is better) Translates to: MQQTWLQVSQVQRLE*RKRWRSPQRAQPQR Trigger: CCTTTGGGGCTGGGCCCTCTGCGGGCTCCTCCATCTCTTCCTCCACTCCAGCCTTTGGACTTGGGAAACCTGAAGCCACGTCTGCTGCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115101.4 |
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| 3UTR TCA 90 bp | GAAGAGATGGAGGAGCCCGCAGAGGGCCCAGCCCCAAAGGCTGGGTaGCTTCCAAATACTGAAGTGCTTCCGGAAGGAGGAGTGGCAAGT | + |
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Preference number: 1 (lower is better) Translates to: EEMEEPAEGPAPKAG*LPNTEVLPEGGVAS Trigger: ACTTGCCACTCCTCCTTCCGGAAGCACTTCAGTATTTGGAAGTCACCCAGCCTTTGGGGCTGGGCCCTCTGCGGGCTCCTCCATCTCTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115101.4 |
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| 3UTR GCA 90 bp | CTCTTGAGTGCTGGGGAGACAGATTCACGCACTCCCATGCCTAAGTaGTGGGCATCAGCTTGGGTCCTCACATCTGCATATCTCTGCAGC | + |
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Preference number: 1 (lower is better) Translates to: LLSAGETDSRTPMPK*WASAWVLTSAYLCS Trigger: GCTGCAGAGATATGCAGATGTGAGGACCCAAGCTGATGCCCAGCACTTAGGCATGGGAGTGCGTGAATCTGTCTCCCCAGCACTCAAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049887.13 |
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| 3UTR CCA 90 bp | TTGAGTGCTGGGGAGACAGATTCACGCACTCCCATGCCTAAGTGCTaGGCATCAGCTTGGGTCCTCACATCTGCATATCTCTGCAGCCAC | + |
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Preference number: 1 (lower is better) Translates to: LSAGETDSRTPMPKC*ASAWVLTSAYLCSH Trigger: GTGGCTGCAGAGATATGCAGATGTGAGGACCCAAGCTGATGCCCAGCACTTAGGCATGGGAGTGCGTGAATCTGTCTCCCCAGCACTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049887.13 |
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| 3UTR TCA 90 bp | AATGGCTGGTCAGCAAGTTCTGGGCATCTACCTGTCTCTGCCTCTTaGGTGCTGGGGAGACAGATTCACGCACTCCCATGCCTAAGTGCT | + |
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Preference number: 1 (lower is better) Translates to: NGWSASSGHLPVSAS*VLGRQIHALPCLSA Trigger: AGCACTTAGGCATGGGAGTGCGTGAATCTGTCTCCCCAGCACTCAAGAGGCAGAGACAGGTAGATGCCCAGAACTTGCTGACCAGCCATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049887.13 |
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| 3UTR GCA 90 bp | TTCTGGAAATGGCTGGTCAGCAAGTTCTGGGCATCTACCTGTCTCTaGCTCTTGAGTGCTGGGGAGACAGATTCACGCACTCCCATGCCT | + |
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Preference number: 1 (lower is better) Translates to: FWKWLVSKFWASTCL*LLSAGETDSRTPMP Trigger: AGGCATGGGAGTGCGTGAATCTGTCTCCCCAGCACTCAAGAGGCAGAGACAGGTAGATGCCCAGAACTTGCTGACCAGCCATTTCCAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049887.13 |
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| 3UTR TCA 90 bp | CCGCTACCTCCAAACACGTCAGTGGAAGGTTTAGCAAATACAGCCTaGGAATGTGGGCTAGGACTGCCAAAACCAGCCACAGAACTGCCG | + |
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Preference number: 1 (lower is better) Translates to: PLPPNTSVEGLANTA*ECGLGLPKPATELP Trigger: CGGCAGTTCTGTGGCTGGTTTTGGCAGTCCTAGCCCACATTCTCAGGCTGTATTTGCTAAACCTTCCACTGACGTGTTTGGAGGTAGCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115101.4 |
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| 3UTR TCA 90 bp | TTCTCTTGGAGGTCTCTTGTTCACTCTGTGCTGTCCACACTGGCCTaGATTTGTGGTGTTCTGCTGCTCAGCTTCCCAGACTGTAGGCAT | + |
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Preference number: 1 (lower is better) Translates to: FSWRSLVHSVLSTLA*ICGVLLLSFPDCRH Trigger: ATGCCTACAGTCTGGGAAGCTGAGCAGCAGAACACCACAAATTCAGGCCAGTGTGGACAGCACAGAGTGAACAAGAGACCTCCAAGAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049887.13 ENSMUST00000115101.4 |
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| 3UTR GCA 90 bp | CCCAAACGACCCTGCTTGCTTACTTCCAAATCCAAACGCAGGCACTaGTTGACTGACCCCATCTTTTACGTCAGAGAGCAGAGCTCCTTT | + |
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Preference number: 1 (lower is better) Translates to: PKRPCLLTSKSKRRH*LTDPIFYVREQSSF Trigger: AAAGGAGCTCTGCTCTCTGACGTAAAAGATGGGGTCAGTCAAGCAGTGCCTGCGTTTGGATTTGGAAGTAAGCAAGCAGGGTCGTTTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115101.4 |
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| 3UTR CCA 90 bp | GAGCTTTCTCTTGGAGGTCTCTTGTTCACTCTGTGCTGTCCACACTaGCCTGAATTTGTGGTGTTCTGCTGCTCAGCTTCCCAGACTGTA | + |
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Preference number: 1 (lower is better) Translates to: ELSLGGLLFTLCCPH*PEFVVFCCSASQTV Trigger: TACAGTCTGGGAAGCTGAGCAGCAGAACACCACAAATTCAGGCCAGTGTGGACAGCACAGAGTGAACAAGAGACCTCCAAGAGAAAGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049887.13 ENSMUST00000115101.4 |
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| 3UTR CCA 90 bp | TCCAAACACGTCAGTGGAAGGTTTAGCAAATACAGCCTGAGAATGTaGGCTAGGACTGCCAAAACCAGCCACAGAACTGCCGCTTCTCAA | + |
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Preference number: 1 (lower is better) Translates to: SKHVSGRFSKYSLRM*ARTAKTSHRTAASQ Trigger: TTGAGAAGCGGCAGTTCTGTGGCTGGTTTTGGCAGTCCTAGCCCACATTCTCAGGCTGTATTTGCTAAACCTTCCACTGACGTGTTTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115101.4 |
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| 3UTR CCA 90 bp | GCCTCTGATGTTAGATGGGAATCACACTTTAAAAGGGTCAGAATATaGATCCCGAGGGAAAGAATGCTCCGCACTGTTCATGAACACCTG | + |
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Preference number: 1 (lower is better) Translates to: ASDVRWESHFKRVRI*IPRERMLRTVHEHL Trigger: CAGGTGTTCATGAACAGTGCGGAGCATTCTTTCCCTCGGGATCCATATTCTGACCCTTTTAAAGTGTGATTCCCATCTAACATCAGAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049887.13 |
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| 3UTR TCA 90 bp | CCACTGTTCACATCCCTATTTAAAGGGACAGAAAGTGGAGTAGAATaGGAAAATTACTTTATTCAGTACACTGTACTGTTTAGTTCCACT | + |
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Preference number: 1 (lower is better) Translates to: PLFTSLFKGTESGVE*ENYFIQYTVLFSST Trigger: AGTGGAACTAAACAGTACAGTGTACTGAATAAAGTAATTTTCTCATTCTACTCCACTTTCTGTCCCTTTAAATAGGGATGTGAACAGTGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049887.13 |
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| 3UTR-3UTR TCA 90 bp | AAAACCAGCCACAGAACTGCCGCTTCTCAAGGGAGGGGCTGTTGTAGAGCCAGACTGTCCACACTGGCCTaGATTTGTGGTGTTCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: KTSHRTAASQGRGCCRARLSTLA*ICGVLL Trigger: CAGCAGAACACCACAAATTCAGGCCAGTGTGGACAG...TCTGGCTCTACAACAGCCCCTCCCTTGAGAAGCGGCAGTTCTGTGGCTGGTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115101.4 |
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| 3UTR-3UTR GCA 90 bp | TGTTGTAGAGCCAGAGGGACTCGCTGCCATGGAGGCTGGAAATCCCGAAAACCCCTCTTGTTCACTCTGTaGTGTCCACACTGGCCTGAA | + |
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Preference number: 2 (lower is better) Translates to: CCRARGTRCHGGWKSRKPLLFTL*CPHWPE Trigger: TTCAGGCCAGTGTGGACAGCACAGAGTGAACAAGAG...GGGTTTTCGGGATTTCCAGCCTCCATGGCAGCGAGTCCCTCTGGCTCTACAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115101.4 |
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| 3UTR-3UTR TCA 90 bp | TGTTGTAGAGCCAGAGGGACTCGCTGCCATGGAGGCTGGAAATCCCGAAAACCCAACCTTCAGGGCTCTTaGACGAAAATGATGCAGCAG | + |
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Preference number: 2 (lower is better) Translates to: CCRARGTRCHGGWKSRKPNLQGS*TKMMQQ Trigger: CTGCTGCATCATTTTCGTTCAAGAGCCCTGAAGGTT...GGGTTTTCGGGATTTCCAGCCTCCATGGCAGCGAGTCCCTCTGGCTCTACAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115101.4 |
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| 3UTR-3UTR TCA 90 bp | TTGGAGGTCTCTTGTTCACTCTGTGCTGTCCACACTGGCCTGAATTTGTGGTGTGCTGATCCCTGGGTGTaGACAGTGCGTTATCAGCGG | + |
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Preference number: 2 (lower is better) Translates to: LEVSCSLCAVHTGLNLWCADPWV*TVRYQR Trigger: CCGCTGATAACGCACTGTTCACACCCAGGGATCAGC...ACACCACAAATTCAGGCCAGTGTGGACAGCACAGAGTGAACAAGAGACCTCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115101.4 |
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| 3UTR-3UTR GCA 90 bp | TGTTTGTGCGCAGGTGTGTGTGATGGCCAAAGGTTGGTGTTAGGTGTCTTCCCCCTCTTGTTCACTCTGTaGTGTCCACACTGGCCTGAA | + |
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Preference number: 2 (lower is better) Translates to: CLCAGVCDGQRLVLGVFPLLFTL*CPHWPE Trigger: TTCAGGCCAGTGTGGACAGCACAGAGTGAACAAGAG...GGGGAAGACACCTAACACCAACCTTTGGCCATCACACACACCTGCGCACAAACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049887.13 |
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| 3UTR-3UTR GCA 90 bp | TGTTTGTGCGCAGGTGTGTGTGATGGCCAAAGGTTGGTGTTAGGTGTCTTCCCCGAGCCCAGCCTGATCTaGAGCACTATAAAAACAGGG | + |
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Preference number: 2 (lower is better) Translates to: CLCAGVCDGQRLVLGVFPEPSLI*STIKTG Trigger: CCCTGTTTTTATAGTGCTGCAGATCAGGCTGGGCTC...GGGGAAGACACCTAACACCAACCTTTGGCCATCACACACACCTGCGCACAAACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049887.13 |
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| 3UTR-3UTR GCA 90 bp | TTGGAGGTCTCTTGTTCACTCTGTGCTGTCCACACTGGCCTGAATTTGTGGTGTCAGGCATGTACGTGGTaGACAGACACACATGCAGGC | + |
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Preference number: 2 (lower is better) Translates to: LEVSCSLCAVHTGLNLWCQACTW*TDTHAG Trigger: GCCTGCATGTGTGTCTGTGCACCACGTACATGCCTG...ACACCACAAATTCAGGCCAGTGTGGACAGCACAGAGTGAACAAGAGACCTCCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049887.13 |
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| 3UTR CAA 90 bp | CGGTGGCGGCTTCAGTGGAATTTTTCCCAGGGTAAATCTCTGGGATaGAAACTGCTCCAGTTCTTCCTTCATCAGCTGATCCCTGGGTGT | + |
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Preference number: 2 (lower is better) Translates to: RWRLQWNFSQGKSLG*KLLQFFLHQLIPGC Trigger: ACACCCAGGGATCAGCTGATGAAGGAAGAACTGGAGCAGTTTCAATCCCAGAGATTTACCCTGGGAAAAATTCCACTGAAGCCGCCACCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115101.4 |
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| 3UTR-3UTR GCA 90 bp | TATCTCTGCAGCCACTGCTCCACCCACTCAGCGGCTCCTTCCACGTTTGATTTTGAATTTGTGGTGTTCTaGTGCTCAGCTTCCCAGACT | + |
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Preference number: 2 (lower is better) Translates to: YLCSHCSTHSAAPSTFDFEFVVF*CSASQT Trigger: AGTCTGGGAAGCTGAGCAGCAGAACACCACAAATTC...AAAATCAAACGTGGAAGGAGCCGCTGAGTGGGTGGAGCAGTGGCTGCAGAGATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049887.13 |
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| 3UTR-3UTR CCA 90 bp | CACTGGCCTGAATTTGTGGTGTTCTGCTGCTCAGCTTCCCAGACTGTAGGCATGCATGCAGGACATGCCTaGCTAAGGCATTCTTTCTGT | + |
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Preference number: 2 (lower is better) Translates to: HWPEFVVFCCSASQTVGMHAGHA*LRHSFC Trigger: ACAGAAAGAATGCCTTAGCCAGGCATGTCCTGCATG...CATGCCTACAGTCTGGGAAGCTGAGCAGCAGAACACCACAAATTCAGGCCAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049887.13 ENSMUST00000115101.4 |
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| 3UTR CAA 90 bp | AAACGACCCTGCTTGCTTACTTCCAAATCCAAACGCAGGCACTGCTaGACTGACCCCATCTTTTACGTCAGAGAGCAGAGCTCCTTTGGT | + |
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Preference number: 2 (lower is better) Translates to: KRPCLLTSKSKRRHC*TDPIFYVREQSSFG Trigger: ACCAAAGGAGCTCTGCTCTCTGACGTAAAAGATGGGGTCAGTCAAGCAGTGCCTGCGTTTGGATTTGGAAGTAAGCAAGCAGGGTCGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115101.4 |
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| 3UTR-3UTR GCA 90 bp | GAAAATGATGCAGCAGACGTGGCTTCAGGTTTCCCAAGTCCAAAGGCTGGAGTGGAATTTGTGGTGTTCTaGTGCTCAGCTTCCCAGACT | + |
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Preference number: 2 (lower is better) Translates to: ENDAADVASGFPSPKAGVEFVVF*CSASQT Trigger: AGTCTGGGAAGCTGAGCAGCAGAACACCACAAATTC...CACTCCAGCCTTTGGACTTGGGAAACCTGAAGCCACGTCTGCTGCATCATTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115101.4 |
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| 3UTR-3UTR GCA 90 bp | TTTCAAAGCCATTCAGAGCTTTCTCTTGGAGGTCTCTTGTTCACTCTGTGCTGTTATCTCTGCAGCCACTaGTCCACCCACTCAGCGGCT | + |
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Preference number: 2 (lower is better) Translates to: FQSHSELSLGGLLFTLCCYLCSH*STHSAA Trigger: AGCCGCTGAGTGGGTGGAGCAGTGGCTGCAGAGATA...ACAGCACAGAGTGAACAAGAGACCTCCAAGAGAAAGCTCTGAATGGCTTTGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049887.13 |
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| 3UTR-3UTR GCA 90 bp | TTATACAGTCAGAAGCTCGACCGGTGGCGGCTTCAGTGGAATTTTTCCCAGGGTGAACAGTACTGCTGCTaGTGTTATTCACTGGGAAGC | + |
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Preference number: 2 (lower is better) Translates to: LYSQKLDRWRLQWNFSQGEQYCC*CYSLGS Trigger: GCTTCCCAGTGAATAACAGCAGCAGCAGTACTGTTC...ACCCTGGGAAAAATTCCACTGAAGCCGCCACCGGTCGAGCTTCTGACTGTATAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115101.4 |
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| 3UTR-3UTR CCA 90 bp | TTTATACAGTCAGAAGCTCGACCGGTGGCGGCTTCAGTGGAATTTTTCCCAGGGACTGGCCTGAATTTGTaGTGTTCTGCTGCTCAGCTT | + |
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Preference number: 2 (lower is better) Translates to: FIQSEARPVAASVEFFPGTGLNL*CSAAQL Trigger: AAGCTGAGCAGCAGAACACCACAAATTCAGGCCAGT...CCCTGGGAAAAATTCCACTGAAGCCGCCACCGGTCGAGCTTCTGACTGTATAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115101.4 |
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| 3UTR CAA 90 bp | TTGGGAGACGGAGTTCCTGTCATGCAGGAGACACTGTACCTGGGTTaGATCTCCAGAAACCACTGTTCACATCCCTATTTAAAGGGACAG | + |
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Preference number: 2 (lower is better) Translates to: LGDGVPVMQETLYLG*ISRNHCSHPYLKGQ Trigger: CTGTCCCTTTAAATAGGGATGTGAACAGTGGTTTCTGGAGATCAAACCCAGGTACAGTGTCTCCTGCATGACAGGAACTCCGTCTCCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049887.13 |
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| 3UTR-3UTR TCA 90 bp | CTTTCAAAGCCATTCAGAGCTTTCTCTTGGAGGTCTCTTGTTCACTCTGTGCTGGCCCCAAAGGCTGGGTaGCTTCCAAATACTGAAGTG | + |
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Preference number: 2 (lower is better) Translates to: LSKPFRAFSWRSLVHSVLAPKAG*LPNTEV Trigger: CACTTCAGTATTTGGAAGTCACCCAGCCTTTGGGGC...CAGCACAGAGTGAACAAGAGACCTCCAAGAGAAAGCTCTGAATGGCTTTGAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115101.4 |
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| 3UTR-3UTR GCA 90 bp | CTGGAAATGGCTGGTCAGCAAGTTCTGGGCATCTACCTGTCTCTGCCTCTTGAGAGCACCTTTATATGGTaGCTCACAACTGTAACCTCA | + |
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Preference number: 2 (lower is better) Translates to: LEMAGQQVLGIYLSLPLESTFIW*LTTVTS Trigger: TGAGGTTACAGTTGTGAGGCACCATATAAAGGTGCT...CTCAAGAGGCAGAGACAGGTAGATGCCCAGAACTTGCTGACCAGCCATTTCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049887.13 |
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| 3UTR-3UTR GCA 90 bp | TTTATACAGTCAGAAGCTCGACCGGTGGCGGCTTCAGTGGAATTTTTCCCAGGGTCTGAACAGTACTGCTaGTGCTGTTATTCACTGGGA | + |
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Preference number: 2 (lower is better) Translates to: FIQSEARPVAASVEFFPGSEQYC*CCYSLG Trigger: TCCCAGTGAATAACAGCAGCAGCAGTACTGTTCAGA...CCCTGGGAAAAATTCCACTGAAGCCGCCACCGGTCGAGCTTCTGACTGTATAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115101.4 |
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| 3UTR-3UTR CCA 90 bp | CACTGGCCTGAATTTGTGGTGTTCTGCTGCTCAGCTTCCCAGACTGTAGGCATGTTCAGAGCTTTCTCTTaGAGGTCTCTTGTTCACTCT | + |
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Preference number: 2 (lower is better) Translates to: HWPEFVVFCCSASQTVGMFRAFS*RSLVHS Trigger: AGAGTGAACAAGAGACCTCCAAGAGAAAGCTCTGAA...CATGCCTACAGTCTGGGAAGCTGAGCAGCAGAACACCACAAATTCAGGCCAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049887.13 ENSMUST00000115101.4 |
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| 3UTR CAA 90 bp | CAAAGGTTGGTGTTAGGTGTCTTCCCCTATCATTTCTCCATCCTTTaGACAGGGTTTCTGGAAATGGCTGGTCAGCAAGTTCTGGGCATC | + |
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Preference number: 2 (lower is better) Translates to: QRLVLGVFPYHFSIL*TGFLEMAGQQVLGI Trigger: GATGCCCAGAACTTGCTGACCAGCCATTTCCAGAAACCCTGTCAAAAGGATGGAGAAATGATAGGGGAAGACACCTAACACCAACCTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049887.13 |
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| 3UTR-3UTR TCA 90 bp | AAATCTCTGGGATTGAAACTGCTCCAGTTCTTCCTTCATCAGCTGATCCCTGGGTTAGCAAATACAGCCTaGGAATGTGGGCTAGGACTG | + |
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Preference number: 2 (lower is better) Translates to: KSLGLKLLQFFLHQLIPGLANTA*ECGLGL Trigger: CAGTCCTAGCCCACATTCTCAGGCTGTATTTGCTAA...CCCAGGGATCAGCTGATGAAGGAAGAACTGGAGCAGTTTCAATCCCAGAGATTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115101.4 |
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| 3UTR-3UTR CCA 90 bp | GCTTCCGGAAGGAGGAGTGGCAAGTCCAGGGCTTGTTTTAAAACTAAAGTTCTGCATGCAGGACATGCCTaGCTAAGGCATTCTTTCTGT | + |
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Preference number: 2 (lower is better) Translates to: ASGRRSGKSRACFKTKVLHAGHA*LRHSFC Trigger: ACAGAAAGAATGCCTTAGCCAGGCATGTCCTGCATG...CAGAACTTTAGTTTTAAAACAAGCCCTGGACTTGCCACTCCTCCTTCCGGAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115101.4 |
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| 3UTR CAA 90 bp | CAGCACTATAAAAACAGGGCTTTCAAAGCCATTCAGAGCTTTCTCTaGGAGGTCTCTTGTTCACTCTGTGCTGTCCACACTGGCCTGAAT | + |
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Preference number: 2 (lower is better) Translates to: QHYKNRAFKAIQSFL*EVSCSLCAVHTGLN Trigger: ATTCAGGCCAGTGTGGACAGCACAGAGTGAACAAGAGACCTCCAAGAGAAAGCTCTGAATGGCTTTGAAAGCCCTGTTTTTATAGTGCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049887.13 ENSMUST00000115101.4 |
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| 3UTR-3UTR TCA 90 bp | CACTATAAAAACAGGGCTTTCAAAGCCATTCAGAGCTTTCTCTTGGAGGTCTCTCTGTCCACACTGGCCTaGATTTGTGGTGTTCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: HYKNRAFKAIQSFLLEVSLSTLA*ICGVLL Trigger: CAGCAGAACACCACAAATTCAGGCCAGTGTGGACAG...AGAGACCTCCAAGAGAAAGCTCTGAATGGCTTTGAAAGCCCTGTTTTTATAGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049887.13 ENSMUST00000115101.4 |
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| 3UTR-3UTR TCA 90 bp | AAAAACAGGGCTTTCAAAGCCATTCAGAGCTTTCTCTTGGAGGTCTCTTGTTCAAACGCAGGCACTGCTTaGCTGACCCCATCTTTTACG | + |
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Preference number: 2 (lower is better) Translates to: KNRAFKAIQSFLLEVSCSNAGTA*LTPSFT Trigger: CGTAAAAGATGGGGTCAGTCAAGCAGTGCCTGCGTT...TGAACAAGAGACCTCCAAGAGAAAGCTCTGAATGGCTTTGAAAGCCCTGTTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000115101.4 |
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| 3UTR-3UTR CCA 90 bp | TTTCAAAGCCATTCAGAGCTTTCTCTTGGAGGTCTCTTGTTCACTCTGTGCTGTAACCAGGCATGTACGTaGTGCACAGACACACATGCA | + |
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Preference number: 2 (lower is better) Translates to: FQSHSELSLGGLLFTLCCNQACT*CTDTHA Trigger: TGCATGTGTGTCTGTGCACCACGTACATGCCTGGTT...ACAGCACAGAGTGAACAAGAGACCTCCAAGAGAAAGCTCTGAATGGCTTTGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049887.13 |
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| 3UTR-3UTR CCA 90 bp | TTTCAAAGCCATTCAGAGCTTTCTCTTGGAGGTCTCTTGTTCACTCTGTGCTGTACTGGCCTGAATTTGTaGTGTTCTGCTGCTCAGCTT | + |
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Preference number: 2 (lower is better) Translates to: FQSHSELSLGGLLFTLCCTGLNL*CSAAQL Trigger: AAGCTGAGCAGCAGAACACCACAAATTCAGGCCAGT...ACAGCACAGAGTGAACAAGAGACCTCCAAGAGAAAGCTCTGAATGGCTTTGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049887.13 ENSMUST00000115101.4 |
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| 3UTR-3UTR CCA 90 bp | GATCTGCAGCACTATAAAAACAGGGCTTTCAAAGCCATTCAGAGCTTTCTCTTGCTGTGCTGTCCACACTaGCCTGAATTTGTGGTGTTC | + |
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Preference number: 2 (lower is better) Translates to: DLQHYKNRAFKAIQSFLLLCCPH*PEFVVF Trigger: GAACACCACAAATTCAGGCCAGTGTGGACAGCACAG...CAAGAGAAAGCTCTGAATGGCTTTGAAAGCCCTGTTTTTATAGTGCTGCAGATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049887.13 ENSMUST00000115101.4 |
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| 3UTR-3UTR CCA 90 bp | AAAAACAGGGCTTTCAAAGCCATTCAGAGCTTTCTCTTGGAGGTCTCTTGTTCAATGATGCAGCAGACGTaGCTTCAGGTTTCCCAAGTC | + |
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Preference number: 2 (lower is better) Translates to: KNRAFKAIQSFLLEVSCSMMQQT*LQVSQV Trigger: GACTTGGGAAACCTGAAGCCACGTCTGCTGCATCAT...TGAACAAGAGACCTCCAAGAGAAAGCTCTGAATGGCTTTGAAAGCCCTGTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115101.4 |
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| 3UTR-3UTR GCA 90 bp | GATCTGCAGCACTATAAAAACAGGGCTTTCAAAGCCATTCAGAGCTTTCTCTTGCCAAACGACCCTGCTTaGTTACTTCCAAATCCAAAC | + |
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Preference number: 2 (lower is better) Translates to: DLQHYKNRAFKAIQSFLLPNDPA*LLPNPN Trigger: GTTTGGATTTGGAAGTAAGCAAGCAGGGTCGTTTGG...CAAGAGAAAGCTCTGAATGGCTTTGAAAGCCCTGTTTTTATAGTGCTGCAGATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115101.4 |
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| 3UTR GCA 72 bp | TGGGCATCAGCTTGGGTCCTCACATCTGCATATCTCTaGAGCCACTGCTCCACCCACTCAGCGGCTCCTTCC | + |
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Preference number: 3 (lower is better) Translates to: WASAWVLTSAYL*SHCSTHSAAPS Trigger: GGAAGGAGCCGCTGAGTGGGTGGAGCAGTGGCTGCAGAGATATGCAGATGTGAGGACCCAAGCTGATGCCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049887.13 |
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| 3UTR-3UTR CAA 90 bp | CCGCCTGGCCTGGGTGAGCCCAGCCTGATCTGCAGCACTATAAAAACAGGGCTTAGGCACAAGTCAGAGTaGGGAGACGGAGTTCCTGTC | + |
|
Preference number: 3 (lower is better) Translates to: PPGLGEPSLICSTIKTGLRHKSE*GDGVPV Trigger: GACAGGAACTCCGTCTCCCAACTCTGACTTGTGCCT...AAGCCCTGTTTTTATAGTGCTGCAGATCAGGCTGGGCTCACCCAGGCCAGGCGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049887.13 |
||
| 3UTR GCA 72 bp | GCTTGGGTCCTCACATCTGCATATCTCTGCAGCCACTaGTCCACCCACTCAGCGGCTCCTTCCACGTTTGAT | + |
|
Preference number: 3 (lower is better) Translates to: AWVLTSAYLCSH*STHSAAPSTFD Trigger: ATCAAACGTGGAAGGAGCCGCTGAGTGGGTGGAGCAGTGGCTGCAGAGATATGCAGATGTGAGGACCCAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049887.13 |
||
| 3UTR GCA 72 bp | CAGCCCCAAAGGCTGGGTGACTTCCAAATACTGAAGTaGTTCCGGAAGGAGGAGTGGCAAGTCCAGGGCTTG | + |
|
Preference number: 3 (lower is better) Translates to: QPQRLGDFQILK*FRKEEWQVQGL Trigger: CAAGCCCTGGACTTGCCACTCCTCCTTCCGGAAGCACTTCAGTATTTGGAAGTCACCCAGCCTTTGGGGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115101.4 |
||
| 3UTR CCA 72 bp | TCACGCACTCCCATGCCTAAGTGCTGGGCATCAGCTTaGGTCCTCACATCTGCATATCTCTGCAGCCACTGC | + |
|
Preference number: 3 (lower is better) Translates to: SRTPMPKCWASA*VLTSAYLCSHC Trigger: GCAGTGGCTGCAGAGATATGCAGATGTGAGGACCCAAGCTGATGCCCAGCACTTAGGCATGGGAGTGCGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049887.13 |
||
| 3UTR TCA 72 bp | AGGAGTATGGGTCAGGTAGAATCCGCCTGGCCTGGGTaGGCCCAGCCTGATCTGCAGCACTATAAAAACAGG | + |
|
Preference number: 3 (lower is better) Translates to: RSMGQVESAWPG*AQPDLQHYKNR Trigger: CCTGTTTTTATAGTGCTGCAGATCAGGCTGGGCTCACCCAGGCCAGGCGGATTCTACCTGACCCATACTCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049887.13 ENSMUST00000115101.4 |
||
| 3UTR GCA 72 bp | CTGTGCTGTCCACACTGGCCTGAATTTGTGGTGTTCTaGTGCTCAGCTTCCCAGACTGTAGGCATGCAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: LCCPHWPEFVVF*CSASQTVGMQD Trigger: GTCCTGCATGCCTACAGTCTGGGAAGCTGAGCAGCAGAACACCACAAATTCAGGCCAGTGTGGACAGCACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049887.13 ENSMUST00000115101.4 |
||
| 3UTR TCA 72 bp | CGCTGCCATGGAGGCTGGAAATCCCGAAAACCCAGGTaGTGCAAAACTGGAACCTTCAGGGCTCTTGAACGA | + |
|
Preference number: 3 (lower is better) Translates to: RCHGGWKSRKPR*CKTGTFRALER Trigger: TCGTTCAAGAGCCCTGAAGGTTCCAGTTTTGCATCACCTGGGTTTTCGGGATTTCCAGCCTCCATGGCAGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115101.4 |
||
| 3UTR GCA 72 bp | TGCTGTCCACACTGGCCTGAATTTGTGGTGTTCTGCTaGTCAGCTTCCCAGACTGTAGGCATGCAGGACATG | + |
|
Preference number: 3 (lower is better) Translates to: CCPHWPEFVVFC*SASQTVGMQDM Trigger: CATGTCCTGCATGCCTACAGTCTGGGAAGCTGAGCAGCAGAACACCACAAATTCAGGCCAGTGTGGACAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049887.13 ENSMUST00000115101.4 |
||
| 3UTR CCA 72 bp | TGGTGCACAGACACACATGCAGGCACAAGTCAGAGTTaGGAGACGGAGTTCCTGTCATGCAGGAGACACTGT | + |
|
Preference number: 3 (lower is better) Translates to: WCTDTHAGTSQS*ETEFLSCRRHC Trigger: ACAGTGTCTCCTGCATGACAGGAACTCCGTCTCCCAACTCTGACTTGTGCCTGCATGTGTGTCTGTGCACCA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049887.13 |
||
| 3UTR-3UTR CAA 90 bp | TGTTGTAGAGCCAGAGGGACTCGCTGCCATGGAGGCTGGAAATCCCGAAAACCCGAACCTTCAGGGCTCTaGAACGAAAATGATGCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: CCRARGTRCHGGWKSRKPEPSGL*NENDAA Trigger: TGCTGCATCATTTTCGTTCAAGAGCCCTGAAGGTTC...GGGTTTTCGGGATTTCCAGCCTCCATGGCAGCGAGTCCCTCTGGCTCTACAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115101.4 |
||
| 3UTR TCA 72 bp | AGGTCTCTTGTTCACTCTGTGCTGTCCACACTGGCCTaGATTTGTGGTGTTCTGCTGCTCAGCTTCCCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: RSLVHSVLSTLA*ICGVLLLSFPD Trigger: GTCTGGGAAGCTGAGCAGCAGAACACCACAAATTCAGGCCAGTGTGGACAGCACAGAGTGAACAAGAGACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049887.13 ENSMUST00000115101.4 |
||
| 3UTR GCA 72 bp | CCCTGCTTGCTTACTTCCAAATCCAAACGCAGGCACTaGTTGACTGACCCCATCTTTTACGTCAGAGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: PCLLTSKSKRRH*LTDPIFYVREQ Trigger: CTGCTCTCTGACGTAAAAGATGGGGTCAGTCAAGCAGTGCCTGCGTTTGGATTTGGAAGTAAGCAAGCAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115101.4 |
||
| 3UTR CCA 72 bp | GTCAGTGGAAGGTTTAGCAAATACAGCCTGAGAATGTaGGCTAGGACTGCCAAAACCAGCCACAGAACTGCC | + |
|
Preference number: 3 (lower is better) Translates to: VSGRFSKYSLRM*ARTAKTSHRTA Trigger: GGCAGTTCTGTGGCTGGTTTTGGCAGTCCTAGCCCACATTCTCAGGCTGTATTTGCTAAACCTTCCACTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115101.4 |
||
| 3UTR TCA 72 bp | TGCAAAACTGGAACCTTCAGGGCTCTTGAACGAAAATaGTGCAGCAGACGTGGCTTCAGGTTTCCCAAGTCC | + |
|
Preference number: 3 (lower is better) Translates to: CKTGTFRALERK*CSRRGFRFPKS Trigger: GGACTTGGGAAACCTGAAGCCACGTCTGCTGCATCATTTTCGTTCAAGAGCCCTGAAGGTTCCAGTTTTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115101.4 |
||
| 3UTR TCA 72 bp | CCAAACACGTCAGTGGAAGGTTTAGCAAATACAGCCTaGGAATGTGGGCTAGGACTGCCAAAACCAGCCACA | + |
|
Preference number: 3 (lower is better) Translates to: PNTSVEGLANTA*ECGLGLPKPAT Trigger: TGTGGCTGGTTTTGGCAGTCCTAGCCCACATTCTCAGGCTGTATTTGCTAAACCTTCCACTGACGTGTTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115101.4 |
||
| 3UTR GCA 72 bp | GAGGACGAGAGTTCAGTTCCTAGCACCTTTATATGGTaGCTCACAACTGTAACCTCAGCTGCAGGGAATCTG | + |
|
Preference number: 3 (lower is better) Translates to: EDESSVPSTFIW*LTTVTSAAGNL Trigger: CAGATTCCCTGCAGCTGAGGTTACAGTTGTGAGGCACCATATAAAGGTGCTAGGAACTGAACTCTCGTCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049887.13 |
||
| 3UTR-3UTR CAA 90 bp | TCCTGTCATGCAGGAGACACTGTACCTGGGTTTGATCTCCAGAAACCACTGTTCATTCAGAGCTTTCTCTaGGAGGTCTCTTGTTCACTC | + |
|
Preference number: 3 (lower is better) Translates to: SCHAGDTVPGFDLQKPLFIQSFL*EVSCSL Trigger: GAGTGAACAAGAGACCTCCAAGAGAAAGCTCTGAAT...GAACAGTGGTTTCTGGAGATCAAACCCAGGTACAGTGTCTCCTGCATGACAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049887.13 |
||
| 3UTR-3UTR CAA 90 bp | TTGGAGGTCTCTTGTTCACTCTGTGCTGTCCACACTGGCCTGAATTTGTGGTGTATTCAGAGCTTTCTCTaGGAGGTCTCTTGTTCACTC | + |
|
Preference number: 3 (lower is better) Translates to: LEVSCSLCAVHTGLNLWCIQSFL*EVSCSL Trigger: GAGTGAACAAGAGACCTCCAAGAGAAAGCTCTGAAT...ACACCACAAATTCAGGCCAGTGTGGACAGCACAGAGTGAACAAGAGACCTCCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049887.13 ENSMUST00000115101.4 |
||
| 3UTR CCA 72 bp | AAAACAGGGCTTTCAAAGCCATTCAGAGCTTTCTCTTaGAGGTCTCTTGTTCACTCTGTGCTGTCCACACTG | + |
|
Preference number: 3 (lower is better) Translates to: KTGLSKPFRAFS*RSLVHSVLSTL Trigger: CAGTGTGGACAGCACAGAGTGAACAAGAGACCTCCAAGAGAAAGCTCTGAATGGCTTTGAAAGCCCTGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049887.13 ENSMUST00000115101.4 |
||
| 3UTR-3UTR CAA 90 bp | TTTCAAAGCCATTCAGAGCTTTCTCTTGGAGGTCTCTTGTTCACTCTGTGCTGTCGGCTCCTTCCACGTTaGATTTTCTCCCATGTAAAA | + |
|
Preference number: 3 (lower is better) Translates to: FQSHSELSLGGLLFTLCCRLLPR*IFSHVK Trigger: TTTTACATGGGAGAAAATCAAACGTGGAAGGAGCCG...ACAGCACAGAGTGAACAAGAGACCTCCAAGAGAAAGCTCTGAATGGCTTTGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049887.13 |
||
| 3UTR CCA 72 bp | GTTAGATGGGAATCACACTTTAAAAGGGTCAGAATATaGATCCCGAGGGAAAGAATGCTCCGCACTGTTCAT | + |
|
Preference number: 3 (lower is better) Translates to: VRWESHFKRVRI*IPRERMLRTVH Trigger: ATGAACAGTGCGGAGCATTCTTTCCCTCGGGATCCATATTCTGACCCTTTTAAAGTGTGATTCCCATCTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049887.13 |
||
| 3UTR CCA 72 bp | GTGATGGAAGATTCTTTGTTAATGACACGCATGTATTaGTCCGCCTGTCATTGTGTAGTTGATCTGCATTTG | + |
|
Preference number: 3 (lower is better) Translates to: VMEDSLLMTRMY*SACHCVVDLHL Trigger: CAAATGCAGATCAACTACACAATGACAGGCGGACCAATACATGCGTGTCATTAACAAAGAATCTTCCATCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049887.13 |
||
| CDS-3UTR GCA 90 bp | TGGAGTGGAGGAAGAGATGGAGGAGCCCGCAGAGGGCCCAGCCCCAAAGGCTGGTTCCCTGAGGGTGGCTaGTGCTGCGGTGGCGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: WSGGRDGGARRGPSPKGWFPEGG*CCGGGC Trigger: GCAGCCGCCACCGCAGCAGCAGCCACCCTCAGGGAA...CCAGCCTTTGGGGCTGGGCCCTCTGCGGGCTCCTCCATCTCTTCCTCCACTCCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115101.4 |
||
| CDS-3UTR GCA 90 bp | CAAGGGAGGGGCTGTTGTAGAGCCAGAGGGACTCGCTGCCATGGAGGCTGGAAAGAGGGTGGCTGCTGCTaGGGTGGCGGCTGCCGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: QGRGCCRARGTRCHGGWKEGGCC*GGGCRA Trigger: GGCTCGGCAGCCGCCACCGCAGCAGCAGCCACCCTC...TTTCCAGCCTCCATGGCAGCGAGTCCCTCTGGCTCTACAACAGCCCCTCCCTTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115101.4 |
||
| CDS-3UTR GCA 90 bp | AGCTTGGGTCCTCACATCTGCATATCTCTGCAGCCACTGCTCCACCCACTCAGCGAGGGTGGCTGCTGCTaGGGTGGCGGCTGCCGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SLGPHICISLQPLLHPLSEGGCC*GGGCRA Trigger: GGCTCGGCAGCCGCCACCGCAGCAGCAGCCACCCTC...GCTGAGTGGGTGGAGCAGTGGCTGCAGAGATATGCAGATGTGAGGACCCAAGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049887.13 |
||
| CDS-3UTR GCA 90 bp | GGCATCAGCTTGGGTCCTCACATCTGCATATCTCTGCAGCCACTGCTCCACCCATTCCCTGAGGGTGGCTaGTGCTGCGGTGGCGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GISLGPHICISLQPLLHPFPEGG*CCGGGC Trigger: GCAGCCGCCACCGCAGCAGCAGCCACCCTCAGGGAA...TGGGTGGAGCAGTGGCTGCAGAGATATGCAGATGTGAGGACCCAAGCTGATGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049887.13 |
||
| CDS-3UTR TCA 90 bp | TGGAGTGGAGGAAGAGATGGAGGAGCCCGCAGAGGGCCCAGCCCCAAAGGCTGGAAGCGGCACCGGCCTTaGAGGAAAAACTGGCATATG | + |
|
Preference number: 4 (lower is better) Translates to: WSGGRDGGARRGPSPKGWKRHRP*RKNWHM Trigger: CATATGCCAGTTTTTCCTTCAAGGCCGGTGCCGCTT...CCAGCCTTTGGGGCTGGGCCCTCTGCGGGCTCCTCCATCTCTTCCTCCACTCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115101.4 |
||
| CDS-3UTR GCA 90 bp | AGCTTGGGTCCTCACATCTGCATATCTCTGCAGCCACTGCTCCACCCACTCAGCGCCAGAGGGACTCGCTaGCATGGAGGCTGGAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: SLGPHICISLQPLLHPLSARGTR*HGGWKS Trigger: GGATTTCCAGCCTCCATGGCAGCGAGTCCCTCTGGC...GCTGAGTGGGTGGAGCAGTGGCTGCAGAGATATGCAGATGTGAGGACCCAAGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049887.13 |
||
| CDS-3UTR CCA 90 bp | CCGCCTGGCCTGGGTGAGCCCAGCCTGATCTGCAGCACTATAAAAACAGGGCTTCCCATGGTGTGGACTTaGGGAAGCTGGAAGGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: PPGLGEPSLICSTIKTGLPMVWT*GSWKAG Trigger: TCCAGCCTTCCAGCTTCCCCAAGTCCACACCATGGG...AAGCCCTGTTTTTATAGTGCTGCAGATCAGGCTGGGCTCACCCAGGCCAGGCGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049887.13 ENSMUST00000115101.4 |
||
| CDS-3UTR CCA 90 bp | AGCTTGGGTCCTCACATCTGCATATCTCTGCAGCCACTGCTCCACCCACTCAGCCCCATGGTGTGGACTTaGGGAAGCTGGAAGGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SLGPHICISLQPLLHPLSPMVWT*GSWKAG Trigger: TCCAGCCTTCCAGCTTCCCCAAGTCCACACCATGGG...GCTGAGTGGGTGGAGCAGTGGCTGCAGAGATATGCAGATGTGAGGACCCAAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049887.13 |
||
| CDS-3UTR GCA 90 bp | AGCTTGGGTCCTCACATCTGCATATCTCTGCAGCCACTGCTCCACCCACTCAGCTGTCCTGATCTCTGCTaGCACCCCATGGTGTGGACT | + |
|
Preference number: 4 (lower is better) Translates to: SLGPHICISLQPLLHPLSCPDLC*HPMVWT Trigger: AGTCCACACCATGGGGTGGCAGCAGAGATCAGGACA...GCTGAGTGGGTGGAGCAGTGGCTGCAGAGATATGCAGATGTGAGGACCCAAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049887.13 |
||
| CDS-3UTR GCA 90 bp | CTGCTCAGCTTCCCAGACTGTAGGCATGCAGGACATGCCTGGCTAAGGCATTCTCCTGGGTGTGAACAGTaGGTTATCAGCGGCACCGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLSFPDCRHAGHAWLRHSPGCEQ*VISGTG Trigger: TCCGGTGCCGCTGATAACGCACTGTTCACACCCAGG...AGAATGCCTTAGCCAGGCATGTCCTGCATGCCTACAGTCTGGGAAGCTGAGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049887.13 |
||
| CDS-3UTR CCA 90 bp | CTGGGGAGACAGATTCACGCACTCCCATGCCTAAGTGCTGGGCATCAGCTTGGGCCCAAGTCCAAAGGCTaGAGTGGAGGAAGAGATGGA | + |
|
Preference number: 4 (lower is better) Translates to: LGRQIHALPCLSAGHQLGPKSKG*SGGRDG Trigger: TCCATCTCTTCCTCCACTCCAGCCTTTGGACTTGGG...CCCAAGCTGATGCCCAGCACTTAGGCATGGGAGTGCGTGAATCTGTCTCCCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049887.13 |
||
| CDS-3UTR TCA 90 bp | TGTTGTAGAGCCAGAGGGACTCGCTGCCATGGAGGCTGGAAATCCCGAAAACCCAATGGTGGTTTGTCCTaGTCTCTGCTGCCACCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: CCRARGTRCHGGWKSRKPNGGLS*SLLPPH Trigger: ATGGGGTGGCAGCAGAGATCAGGACAAACCACCATT...GGGTTTTCGGGATTTCCAGCCTCCATGGCAGCGAGTCCCTCTGGCTCTACAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115101.4 |
||
| CDS-3UTR GCA 90 bp | AAAACCAGCCACAGAACTGCCGCTTCTCAAGGGAGGGGCTGTTGTAGAGCCAGAGTTTGTCCTGATCTCTaGTGCCACCCCATGGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KTSHRTAASQGRGCCRARVCPDL*CHPMVW Trigger: CCACACCATGGGGTGGCAGCAGAGATCAGGACAAAC...TCTGGCTCTACAACAGCCCCTCCCTTGAGAAGCGGCAGTTCTGTGGCTGGTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000115101.4 |
||
| CDS-3UTR CCA 90 bp | CCGCCTGGCCTGGGTGAGCCCAGCCTGATCTGCAGCACTATAAAAACAGGGCTTATGATGCAGCAGACGTaGCTTCAGGTTTCCCAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: PPGLGEPSLICSTIKTGLMMQQT*LQVSQV Trigger: GACTTGGGAAACCTGAAGCCACGTCTGCTGCATCAT...AAGCCCTGTTTTTATAGTGCTGCAGATCAGGCTGGGCTCACCCAGGCCAGGCGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049887.13 |
||
| 3UTR CAA 72 bp | GTGGTGCACAGACACACATGCAGGCACAAGTCAGAGTaGGGAGACGGAGTTCCTGTCATGCAGGAGACACTG | + |
|
Preference number: 4 (lower is better) Translates to: VVHRHTCRHKSE*GDGVPVMQETL Trigger: CAGTGTCTCCTGCATGACAGGAACTCCGTCTCCCAACTCTGACTTGTGCCTGCATGTGTGTCTGTGCACCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049887.13 |
||
| 3UTR CAA 72 bp | GCCACTGCTCCACCCACTCAGCGGCTCCTTCCACGTTaGATTTTCTCCCATGTAAAAGGTGAGGGCTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: ATAPPTQRLLPR*IFSHVKGEGLG Trigger: TCCCAAGCCCTCACCTTTTACATGGGAGAAAATCAAACGTGGAAGGAGCCGCTGAGTGGGTGGAGCAGTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049887.13 |
||
| CDS-3UTR CCA 90 bp | CAGCGGCTCCTTCCACGTTTGATTTTCTCCCATGTAAAAGGTGAGGGCTTGGGATGCCACCCCATGGTGTaGACTTGGGGAAGCTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QRLLPRLIFSHVKGEGLGCHPMV*TWGSWK Trigger: CTTCCAGCTTCCCCAAGTCCACACCATGGGGTGGCA...TCCCAAGCCCTCACCTTTTACATGGGAGAAAATCAAACGTGGAAGGAGCCGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000049887.13 |
||
| CDS-3UTR TCA 90 bp | CACTGGCCTGAATTTGTGGTGTTCTGCTGCTCAGCTTCCCAGACTGTAGGCATGAATGGTGGTTTGTCCTaGTCTCTGCTGCCACCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: HWPEFVVFCCSASQTVGMNGGLS*SLLPPH Trigger: ATGGGGTGGCAGCAGAGATCAGGACAAACCACCATT...CATGCCTACAGTCTGGGAAGCTGAGCAGCAGAACACCACAAATTCAGGCCAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049887.13 ENSMUST00000115101.4 |
||
| CDS-3UTR TCA 90 bp | TATCTCTGCAGCCACTGCTCCACCCACTCAGCGGCTCCTTCCACGTTTGATTTTGCCCCAAAGGCTGGGTaGCTTCCAAATACTGAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: YLCSHCSTHSAAPSTFDFAPKAG*LPNTEV Trigger: CACTTCAGTATTTGGAAGTCACCCAGCCTTTGGGGC...AAAATCAAACGTGGAAGGAGCCGCTGAGTGGGTGGAGCAGTGGCTGCAGAGATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049887.13 |
||
| CDS-3UTR GCA 90 bp | TTGGAGGTCTCTTGTTCACTCTGTGCTGTCCACACTGGCCTGAATTTGTGGTGTTGGAGTACCTCTGGCTaGTGGCATTCCACCCTCGAC | + |
|
Preference number: 4 (lower is better) Translates to: LEVSCSLCAVHTGLNLWCWSTSG*WHSTLD Trigger: GTCGAGGGTGGAATGCCAGCAGCCAGAGGTACTCCA...ACACCACAAATTCAGGCCAGTGTGGACAGCACAGAGTGAACAAGAGACCTCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049887.13 ENSMUST00000115101.4 |
||
| CDS-3UTR GCA 90 bp | GAAAATGATGCAGCAGACGTGGCTTCAGGTTTCCCAAGTCCAAAGGCTGGAGTGTGTCCTGATCTCTGCTaGCACCCCATGGTGTGGACT | + |
|
Preference number: 4 (lower is better) Translates to: ENDAADVASGFPSPKAGVCPDLC*HPMVWT Trigger: AGTCCACACCATGGGGTGGCAGCAGAGATCAGGACA...CACTCCAGCCTTTGGACTTGGGAAACCTGAAGCCACGTCTGCTGCATCATTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115101.4 |
||
| CDS-3UTR GCA 90 bp | TTGGAGGTCTCTTGTTCACTCTGTGCTGTCCACACTGGCCTGAATTTGTGGTGTAACCAGCCACAGAACTaGCGCTTCTCAAGGGAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LEVSCSLCAVHTGLNLWCNQPQN*RFSREG Trigger: CCCCTCCCTTGAGAAGCGGCAGTTCTGTGGCTGGTT...ACACCACAAATTCAGGCCAGTGTGGACAGCACAGAGTGAACAAGAGACCTCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049887.13 |
||
| CDS-3UTR GCA 90 bp | CTGCTCAGCTTCCCAGACTGTAGGCATGCAGGACATGCCTGGCTAAGGCATTCTGAACAGTACTGCTGCTaGTGTTATTCACTGGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LLSFPDCRHAGHAWLRHSEQYCC*CYSLGS Trigger: GCTTCCCAGTGAATAACAGCAGCAGCAGTACTGTTC...AGAATGCCTTAGCCAGGCATGTCCTGCATGCCTACAGTCTGGGAAGCTGAGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049887.13 |
||
| CDS-3UTR CCA 90 bp | TTGGAGGTCTCTTGTTCACTCTGTGCTGTCCACACTGGCCTGAATTTGTGGTGTAGGGACTCGCTGCCATaGAGGCTGGAAATCCCGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LEVSCSLCAVHTGLNLWCRDSLP*RLEIPK Trigger: TTTCGGGATTTCCAGCCTCCATGGCAGCGAGTCCCT...ACACCACAAATTCAGGCCAGTGTGGACAGCACAGAGTGAACAAGAGACCTCCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049887.13 |
||
| CDS-3UTR TCA 90 bp | CTTTCAAAGCCATTCAGAGCTTTCTCTTGGAGGTCTCTTGTTCACTCTGTGCTGGCTGATCCCTGGGTGTaGACAGTGCGTTATCAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: LSKPFRAFSWRSLVHSVLADPWV*TVRYQR Trigger: CCGCTGATAACGCACTGTTCACACCCAGGGATCAGC...CAGCACAGAGTGAACAAGAGACCTCCAAGAGAAAGCTCTGAATGGCTTTGAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049887.13 |
||
| CDS-3UTR CCA 90 bp | AAAAACAGGGCTTTCAAAGCCATTCAGAGCTTTCTCTTGGAGGTCTCTTGTTCAGAGTGGAGGAAGAGATaGAGGAGCCCGCAGAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: KNRAFKAIQSFLLEVSCSEWRKR*RSPQRA Trigger: GGCCCTCTGCGGGCTCCTCCATCTCTTCCTCCACTC...TGAACAAGAGACCTCCAAGAGAAAGCTCTGAATGGCTTTGAAAGCCCTGTTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049887.13 |
||
| CDS-3UTR TCA 90 bp | TTGGAGGTCTCTTGTTCACTCTGTGCTGTCCACACTGGCCTGAATTTGTGGTGTTCCCGAAAACCCAGGTaGTGCAAAACTGGAACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LEVSCSLCAVHTGLNLWCSRKPR*CKTGTF Trigger: GAAGGTTCCAGTTTTGCATCACCTGGGTTTTCGGGA...ACACCACAAATTCAGGCCAGTGTGGACAGCACAGAGTGAACAAGAGACCTCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049887.13 |
||
| CDS-3UTR CCA 90 bp | TATCTCTGCAGCCACTGCTCCACCCACTCAGCGGCTCCTTCCACGTTTGATTTTAAAAGAGCCGAATGGTaGTTTGTCCTGATCTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: YLCSHCSTHSAAPSTFDFKRAEW*FVLISA Trigger: AGCAGAGATCAGGACAAACCACCATTCGGCTCTTTT...AAAATCAAACGTGGAAGGAGCCGCTGAGTGGGTGGAGCAGTGGCTGCAGAGATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049887.13 |
||
| 3UTR CAA 72 bp | GTGTGTTTGTGCGCAGGTGTGTGTGATGGCCAAAGGTaGGTGTTAGGTGTCTTCCCCTATCATTTCTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: VCLCAGVCDGQR*VLGVFPYHFSI Trigger: GATGGAGAAATGATAGGGGAAGACACCTAACACCAACCTTTGGCCATCACACACACCTGCGCACAAACACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049887.13 |
||
| CDS-3UTR TCA 90 bp | CTTTCAAAGCCATTCAGAGCTTTCTCTTGGAGGTCTCTTGTTCACTCTGTGCTGAAGCGGCACCGGCCTTaGAGGAAAAACTGGCATATG | + |
|
Preference number: 4 (lower is better) Translates to: LSKPFRAFSWRSLVHSVLKRHRP*RKNWHM Trigger: CATATGCCAGTTTTTCCTTCAAGGCCGGTGCCGCTT...CAGCACAGAGTGAACAAGAGACCTCCAAGAGAAAGCTCTGAATGGCTTTGAAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049887.13 ENSMUST00000115101.4 |
||
| CDS-3UTR TCA 90 bp | CAGCGGCTCCTTCCACGTTTGATTTTCTCCCATGTAAAAGGTGAGGGCTTGGGAGTAAATCTCTGGGATTaGAACTGCTCCAGTTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: QRLLPRLIFSHVKGEGLGVNLWD*NCSSSS Trigger: GGAAGAACTGGAGCAGTTTCAATCCCAGAGATTTAC...TCCCAAGCCCTCACCTTTTACATGGGAGAAAATCAAACGTGGAAGGAGCCGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049887.13 |
||
| CDS-3UTR GCA 90 bp | TTTCAAAGCCATTCAGAGCTTTCTCTTGGAGGTCTCTTGTTCACTCTGTGCTGTGTTTGTCCTGATCTCTaGTGCCACCCCATGGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: FQSHSELSLGGLLFTLCCVCPDL*CHPMVW Trigger: CCACACCATGGGGTGGCAGCAGAGATCAGGACAAAC...ACAGCACAGAGTGAACAAGAGACCTCCAAGAGAAAGCTCTGAATGGCTTTGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049887.13 ENSMUST00000115101.4 |
||
| CDS-3UTR CCA 90 bp | CACTATAAAAACAGGGCTTTCAAAGCCATTCAGAGCTTTCTCTTGGAGGTCTCTTGCCACCCCATGGTGTaGACTTGGGGAAGCTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: HYKNRAFKAIQSFLLEVSCHPMV*TWGSWK Trigger: CTTCCAGCTTCCCCAAGTCCACACCATGGGGTGGCA...AGAGACCTCCAAGAGAAAGCTCTGAATGGCTTTGAAAGCCCTGTTTTTATAGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000049887.13 ENSMUST00000115101.4 |
||
| CDS-3UTR CCA 90 bp | TATCTCTGCAGCCACTGCTCCACCCACTCAGCGGCTCCTTCCACGTTTGATTTTATCAAAAGAGCCGAATaGTGGTTTGTCCTGATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: YLCSHCSTHSAAPSTFDFIKRAE*WFVLIS Trigger: AGAGATCAGGACAAACCACCATTCGGCTCTTTTGAT...AAAATCAAACGTGGAAGGAGCCGCTGAGTGGGTGGAGCAGTGGCTGCAGAGATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049887.13 |
||
| CDS-3UTR TCA 90 bp | TTTCAAAGCCATTCAGAGCTTTCTCTTGGAGGTCTCTTGTTCACTCTGTGCTGTAACGCAGGCACTGCTTaGCTGACCCCATCTTTTACG | + |
|
Preference number: 4 (lower is better) Translates to: FQSHSELSLGGLLFTLCCNAGTA*LTPSFT Trigger: CGTAAAAGATGGGGTCAGTCAAGCAGTGCCTGCGTT...ACAGCACAGAGTGAACAAGAGACCTCCAAGAGAAAGCTCTGAATGGCTTTGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049887.13 |
||
| CDS-3UTR GCA 90 bp | TCCTGTCATGCAGGAGACACTGTACCTGGGTTTGATCTCCAGAAACCACTGTTCCCAAACGACCCTGCTTaGTTACTTCCAAATCCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: SCHAGDTVPGFDLQKPLFPNDPA*LLPNPN Trigger: GTTTGGATTTGGAAGTAAGCAAGCAGGGTCGTTTGG...GAACAGTGGTTTCTGGAGATCAAACCCAGGTACAGTGTCTCCTGCATGACAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049887.13 |
||
| CDS-3UTR CCA 90 bp | TTATACAGTCAGAAGCTCGACCGGTGGCGGCTTCAGTGGAATTTTTCCCAGGGTATCAAAAGAGCCGAATaGTGGTTTGTCCTGATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LYSQKLDRWRLQWNFSQGIKRAE*WFVLIS Trigger: AGAGATCAGGACAAACCACCATTCGGCTCTTTTGAT...ACCCTGGGAAAAATTCCACTGAAGCCGCCACCGGTCGAGCTTCTGACTGTATAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115101.4 |
||
| CDS-3UTR CCA 90 bp | CACTGGCCTGAATTTGTGGTGTTCTGCTGCTCAGCTTCCCAGACTGTAGGCATGGGGTTTCTTTCTCACTaGCGAGTAAACAGAAAACAT | + |
|
Preference number: 4 (lower is better) Translates to: HWPEFVVFCCSASQTVGMGFLSH*RVNRKH Trigger: ATGTTTTCTGTTTACTCGCCAGTGAGAAAGAAACCC...CATGCCTACAGTCTGGGAAGCTGAGCAGCAGAACACCACAAATTCAGGCCAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049887.13 ENSMUST00000115101.4 |
||
| 3UTR CAA 72 bp | GGAGTTCCTGTCATGCAGGAGACACTGTACCTGGGTTaGATCTCCAGAAACCACTGTTCACATCCCTATTTA | + |
|
Preference number: 4 (lower is better) Translates to: GVPVMQETLYLG*ISRNHCSHPYL Trigger: TAAATAGGGATGTGAACAGTGGTTTCTGGAGATCAAACCCAGGTACAGTGTCTCCTGCATGACAGGAACTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049887.13 |
||
| CDS-3UTR GCA 90 bp | TGTTTGTGCGCAGGTGTGTGTGATGGCCAAAGGTTGGTGTTAGGTGTCTTCCCCAGCTCTGTAAGTTATTaGTGGTTAAGAAGTTATGGT | + |
|
Preference number: 4 (lower is better) Translates to: CLCAGVCDGQRLVLGVFPSSVSY*WLRSYG Trigger: ACCATAACTTCTTAACCAGCAATAACTTACAGAGCT...GGGGAAGACACCTAACACCAACCTTTGGCCATCACACACACCTGCGCACAAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049887.13 |
||
| 3UTR CAA 72 bp | AGCAAGCACGTGAAAGGACACGTGATGGAAGATTCTTaGTTAATGACACGCATGTATTGGTCCGCCTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SKHVKGHVMEDS*LMTRMYWSACH Trigger: ATGACAGGCGGACCAATACATGCGTGTCATTAACAAAGAATCTTCCATCACGTGTCCTTTCACGTGCTTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049887.13 |
||
| CDS-3UTR TCA 90 bp | AAAAACAGGGCTTTCAAAGCCATTCAGAGCTTTCTCTTGGAGGTCTCTTGTTCAAACCTTCAGGGCTCTTaGACGAAAATGATGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KNRAFKAIQSFLLEVSCSNLQGS*TKMMQQ Trigger: CTGCTGCATCATTTTCGTTCAAGAGCCCTGAAGGTT...TGAACAAGAGACCTCCAAGAGAAAGCTCTGAATGGCTTTGAAAGCCCTGTTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049887.13 |
||
| CDS-3UTR TCA 90 bp | AAAAACAGGGCTTTCAAAGCCATTCAGAGCTTTCTCTTGGAGGTCTCTTGTTCATTAGCAAATACAGCCTaGGAATGTGGGCTAGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: KNRAFKAIQSFLLEVSCSLANTA*ECGLGL Trigger: CAGTCCTAGCCCACATTCTCAGGCTGTATTTGCTAA...TGAACAAGAGACCTCCAAGAGAAAGCTCTGAATGGCTTTGAAAGCCCTGTTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049887.13 |
||
| CDS-3UTR GCA 90 bp | CTTTCAAAGCCATTCAGAGCTTTCTCTTGGAGGTCTCTTGTTCACTCTGTGCTGAGTTCTGAACAGTACTaGTGCTGCTGTTATTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: LSKPFRAFSWRSLVHSVLSSEQY*CCCYSL Trigger: CAGTGAATAACAGCAGCAGCAGTACTGTTCAGAACT...CAGCACAGAGTGAACAAGAGACCTCCAAGAGAAAGCTCTGAATGGCTTTGAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049887.13 |
||
| CDS-3UTR TCA 90 bp | GATCTGCAGCACTATAAAAACAGGGCTTTCAAAGCCATTCAGAGCTTTCTCTTGCTCATCAGAGAGAGGTaGAGCAAAAGGGTTTTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: DLQHYKNRAFKAIQSFLLLIRER*SKRVLR Trigger: TCTCAAAACCCTTTTGCTTCACCTCTCTCTGATGAG...CAAGAGAAAGCTCTGAATGGCTTTGAAAGCCCTGTTTTTATAGTGCTGCAGATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000049887.13 ENSMUST00000115101.4 |
||
| CDS-3UTR GCA 90 bp | GCTTCCGGAAGGAGGAGTGGCAAGTCCAGGGCTTGTTTTAAAACTAAAGTTCTGTTCTTTTCATCTTTCTaGTCATCAGAGAGAGGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: ASGRRSGKSRACFKTKVLFFSSF*SSERGE Trigger: TTCACCTCTCTCTGATGAGCAGAAAGATGAAAAGAA...CAGAACTTTAGTTTTAAAACAAGCCCTGGACTTGCCACTCCTCCTTCCGGAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000115101.4 |
||
| CDS-3UTR GCA 90 bp | GATCTGCAGCACTATAAAAACAGGGCTTTCAAAGCCATTCAGAGCTTTCTCTTGTCTGAACAGTACTGCTaGTGCTGTTATTCACTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: DLQHYKNRAFKAIQSFLLSEQYC*CCYSLG Trigger: TCCCAGTGAATAACAGCAGCAGCAGTACTGTTCAGA...CAAGAGAAAGCTCTGAATGGCTTTGAAAGCCCTGTTTTTATAGTGCTGCAGATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049887.13 |
||
| CDS-3UTR GCA 90 bp | CTTTCAAAGCCATTCAGAGCTTTCTCTTGGAGGTCTCTTGTTCACTCTGTGCTGTTCTTTTCATCTTTCTaGTCATCAGAGAGAGGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LSKPFRAFSWRSLVHSVLFFSSF*SSERGE Trigger: TTCACCTCTCTCTGATGAGCAGAAAGATGAAAAGAA...CAGCACAGAGTGAACAAGAGACCTCCAAGAGAAAGCTCTGAATGGCTTTGAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049887.13 ENSMUST00000115101.4 |
||
| CDS-3UTR TCA 90 bp | AAAAACAGGGCTTTCAAAGCCATTCAGAGCTTTCTCTTGGAGGTCTCTTGTTCACTGGTGAAATGTCTGTaGAACCTGAAATATTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: KNRAFKAIQSFLLEVSCSLVKCL*NLKYWV Trigger: AACCCAATATTTCAGGTTTCACAGACATTTCACCAG...TGAACAAGAGACCTCCAAGAGAAAGCTCTGAATGGCTTTGAAAGCCCTGTTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049887.13 |
||
| CDS-3UTR TCA 90 bp | CACTATAAAAACAGGGCTTTCAAAGCCATTCAGAGCTTTCTCTTGGAGGTCTCTTTAAAACTAAAGTTCTaGACAGTACTGCTGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: HYKNRAFKAIQSFLLEVSLKLKF*TVLLLL Trigger: CAGCAGCAGCAGTACTGTTCAGAACTTTAGTTTTAA...AGAGACCTCCAAGAGAAAGCTCTGAATGGCTTTGAAAGCCCTGTTTTTATAGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049887.13 |
||
| CDS-3UTR CCA 90 bp | CACTATAAAAACAGGGCTTTCAAAGCCATTCAGAGCTTTCTCTTGGAGGTCTCTGGGTTTCTTTCTCACTaGCGAGTAAACAGAAAACAT | + |
|
Preference number: 4 (lower is better) Translates to: HYKNRAFKAIQSFLLEVSGFLSH*RVNRKH Trigger: ATGTTTTCTGTTTACTCGCCAGTGAGAAAGAAACCC...AGAGACCTCCAAGAGAAAGCTCTGAATGGCTTTGAAAGCCCTGTTTTTATAGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049887.13 ENSMUST00000115101.4 |
||
| CDS GCA 90 bp | CCTCGACGGTTATTCCCTGAGGGTGGCTGCTGCTGCGGTGGCGGCTaGCGAGCCCCGCCCGCACCCCGGGCGCCGGGATGCTCGTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: PRRLFPEGGCCCGGG*RAPPAPRAPGCSFQ Trigger: CTGGAACGAGCATCCCGGCGCCCGGGGTGCGGGCGGGGCTCGGCAGCCGCCACCGCAGCAGCAGCCACCCTCAGGGAATAACCGTCGAGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049887.13 ENSMUST00000115101.4 |
||
| CDS GCA 90 bp | TGGCTGCTGGCATTCCACCCTCGACGGTTATTCCCTGAGGGTGGCTaGTGCTGCGGTGGCGGCTGCCGAGCCCCGCCCGCACCCCGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: WLLAFHPRRLFPEGG*CCGGGCRAPPAPRA Trigger: CGCCCGGGGTGCGGGCGGGGCTCGGCAGCCGCCACCGCAGCAGCAGCCACCCTCAGGGAATAACCGTCGAGGGTGGAATGCCAGCAGCCA 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049887.13 ENSMUST00000115101.4 |
||
| CDS TCA 90 bp | TGCTGCCACCCCATGGTGTGGACTTGGGGAAGCTGGAAGGCTGGATaGCGTTGGAGTACCTCTGGCTGCTGGCATTCCACCCTCGACGGT | + |
|
Preference number: 5 (lower is better) Translates to: CCHPMVWTWGSWKAG*RWSTSGCWHSTLDG Trigger: ACCGTCGAGGGTGGAATGCCAGCAGCCAGAGGTACTCCAACGTCATCCAGCCTTCCAGCTTCCCCAAGTCCACACCATGGGGTGGCAGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049887.13 ENSMUST00000115101.4 |
||
| CDS CCA 90 bp | GTGGACTTGGGGAAGCTGGAAGGCTGGATGACGTTGGAGTACCTCTaGCTGCTGGCATTCCACCCTCGACGGTTATTCCCTGAGGGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: VDLGKLEGWMTLEYL*LLAFHPRRLFPEGG Trigger: GCCACCCTCAGGGAATAACCGTCGAGGGTGGAATGCCAGCAGCCAGAGGTACTCCAACGTCATCCAGCCTTCCAGCTTCCCCAAGTCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049887.13 ENSMUST00000115101.4 |
||
| CDS CCA 90 bp | TCTCTGCTGCCACCCCATGGTGTGGACTTGGGGAAGCTGGAAGGCTaGATGACGTTGGAGTACCTCTGGCTGCTGGCATTCCACCCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: SLLPPHGVDLGKLEG*MTLEYLWLLAFHPR Trigger: TCGAGGGTGGAATGCCAGCAGCCAGAGGTACTCCAACGTCATCCAGCCTTCCAGCTTCCCCAAGTCCACACCATGGGGTGGCAGCAGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049887.13 ENSMUST00000115101.4 |
||
| CDS-3UTR CAA 90 bp | TATCTCTGCAGCCACTGCTCCACCCACTCAGCGGCTCCTTCCACGTTTGATTTTCCCCATGGTGTGGACTaGGGGAAGCTGGAAGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: YLCSHCSTHSAAPSTFDFPHGVD*GKLEGW Trigger: CCAGCCTTCCAGCTTCCCCAAGTCCACACCATGGGG...AAAATCAAACGTGGAAGGAGCCGCTGAGTGGGTGGAGCAGTGGCTGCAGAGATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049887.13 |
||
| CDS-3UTR CAA 90 bp | TGTTTGTGCGCAGGTGTGTGTGATGGCCAAAGGTTGGTGTTAGGTGTCTTCCCCGAAGGCTGGATGACGTaGGAGTACCTCTGGCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: CLCAGVCDGQRLVLGVFPEGWMT*EYLWLL Trigger: CAGCAGCCAGAGGTACTCCAACGTCATCCAGCCTTC...GGGGAAGACACCTAACACCAACCTTTGGCCATCACACACACCTGCGCACAAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049887.13 |
||
| CDS-3UTR CAA 90 bp | TGGAGTGGAGGAAGAGATGGAGGAGCCCGCAGAGGGCCCAGCCCCAAAGGCTGGAGTTTAGCTGAAATATaGGGTTTCTTTCTCACTGGC | + |
|
Preference number: 5 (lower is better) Translates to: WSGGRDGGARRGPSPKGWSLAEI*GFFLTG Trigger: GCCAGTGAGAAAGAAACCCAATATTTCAGCTAAACT...CCAGCCTTTGGGGCTGGGCCCTCTGCGGGCTCCTCCATCTCTTCCTCCACTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115101.4 |
||
| CDS-3UTR CAA 90 bp | GAAAATGATGCAGCAGACGTGGCTTCAGGTTTCCCAAGTCCAAAGGCTGGAGTGGAAGGCTGGATGACGTaGGAGTACCTCTGGCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: ENDAADVASGFPSPKAGVEGWMT*EYLWLL Trigger: CAGCAGCCAGAGGTACTCCAACGTCATCCAGCCTTC...CACTCCAGCCTTTGGACTTGGGAAACCTGAAGCCACGTCTGCTGCATCATTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115101.4 |
||
| CDS-3UTR CAA 90 bp | CACTGGCCTGAATTTGTGGTGTTCTGCTGCTCAGCTTCCCAGACTGTAGGCATGGAAGCGGCACCGGCCTaGAAGGAAAAACTGGCATAT | + |
|
Preference number: 5 (lower is better) Translates to: HWPEFVVFCCSASQTVGMEAAPA*KEKLAY Trigger: ATATGCCAGTTTTTCCTTCAAGGCCGGTGCCGCTTC...CATGCCTACAGTCTGGGAAGCTGAGCAGCAGAACACCACAAATTCAGGCCAGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049887.13 ENSMUST00000115101.4 |
||
| CDS-3UTR CAA 90 bp | CCGCCTGGCCTGGGTGAGCCCAGCCTGATCTGCAGCACTATAAAAACAGGGCTTGGTAAATCTCTGGGATaGAAACTGCTCCAGTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PPGLGEPSLICSTIKTGLGKSLG*KLLQFF Trigger: GAAGAACTGGAGCAGTTTCAATCCCAGAGATTTACC...AAGCCCTGTTTTTATAGTGCTGCAGATCAGGCTGGGCTCACCCAGGCCAGGCGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049887.13 |
||
| CDS-3UTR CAA 90 bp | GAAAATGATGCAGCAGACGTGGCTTCAGGTTTCCCAAGTCCAAAGGCTGGAGTGGAAGCGGCACCGGCCTaGAAGGAAAAACTGGCATAT | + |
|
Preference number: 5 (lower is better) Translates to: ENDAADVASGFPSPKAGVEAAPA*KEKLAY Trigger: ATATGCCAGTTTTTCCTTCAAGGCCGGTGCCGCTTC...CACTCCAGCCTTTGGACTTGGGAAACCTGAAGCCACGTCTGCTGCATCATTTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115101.4 |
||
| CDS-3UTR CAA 90 bp | GATCTGCAGCACTATAAAAACAGGGCTTTCAAAGCCATTCAGAGCTTTCTCTTGGAACCTTCAGGGCTCTaGAACGAAAATGATGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: DLQHYKNRAFKAIQSFLLEPSGL*NENDAA Trigger: TGCTGCATCATTTTCGTTCAAGAGCCCTGAAGGTTC...CAAGAGAAAGCTCTGAATGGCTTTGAAAGCCCTGTTTTTATAGTGCTGCAGATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049887.13 |
||
| CDS GCA 90 bp | GACTTACAAGCTGTTGAACAGAGTTTAGATAGCTCTGTAAGTTATTaGTGGTTAAGAAGTTATGGTATTCAAGCCTCAACTCCTCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: DLQAVEQSLDSSVSY*WLRSYGIQASTPLV Trigger: CACCAGAGGAGTTGAGGCTTGAATACCATAACTTCTTAACCAGCAATAACTTACAGAGCTATCTAAACTCTGTTCAACAGCTTGTAAGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049887.13 |
||
| CDS GCA 72 bp | TTCCACCCTCGACGGTTATTCCCTGAGGGTGGCTGCTaGTGCGGTGGCGGCTGCCGAGCCCCGCCCGCACCC | + |
|
Preference number: 6 (lower is better) Translates to: FHPRRLFPEGGC*CGGGCRAPPAP Trigger: GGGTGCGGGCGGGGCTCGGCAGCCGCCACCGCAGCAGCAGCCACCCTCAGGGAATAACCGTCGAGGGTGGAA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049887.13 ENSMUST00000115101.4 |
||
| CDS CCA 72 bp | CCACCCCATGGTGTGGACTTGGGGAAGCTGGAAGGCTaGATGACGTTGGAGTACCTCTGGCTGCTGGCATTC | + |
|
Preference number: 6 (lower is better) Translates to: PPHGVDLGKLEG*MTLEYLWLLAF Trigger: GAATGCCAGCAGCCAGAGGTACTCCAACGTCATCCAGCCTTCCAGCTTCCCCAAGTCCACACCATGGGGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049887.13 ENSMUST00000115101.4 |
||
| CDS CAA 90 bp | CCACCCCATGGTGTGGACTTGGGGAAGCTGGAAGGCTGGATGACGTaGGAGTACCTCTGGCTGCTGGCATTCCACCCTCGACGGTTATTC | + |
|
Preference number: 6 (lower is better) Translates to: PPHGVDLGKLEGWMT*EYLWLLAFHPRRLF Trigger: GAATAACCGTCGAGGGTGGAATGCCAGCAGCCAGAGGTACTCCAACGTCATCCAGCCTTCCAGCTTCCCCAAGTCCACACCATGGGGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049887.13 ENSMUST00000115101.4 |
||
| CDS CCA 72 bp | GGGAAGCTGGAAGGCTGGATGACGTTGGAGTACCTCTaGCTGCTGGCATTCCACCCTCGACGGTTATTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: GKLEGWMTLEYL*LLAFHPRRLFP Trigger: AGGGAATAACCGTCGAGGGTGGAATGCCAGCAGCCAGAGGTACTCCAACGTCATCCAGCCTTCCAGCTTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049887.13 ENSMUST00000115101.4 |
||
| CDS CCA 72 bp | GAATGGTGGTTTGTCCTGATCTCTGCTGCCACCCCATaGTGTGGACTTGGGGAAGCTGGAAGGCTGGATGAC | + |
|
Preference number: 6 (lower is better) Translates to: EWWFVLISAATP*CGLGEAGRLDD Trigger: GTCATCCAGCCTTCCAGCTTCCCCAAGTCCACACCATGGGGTGGCAGCAGAGATCAGGACAAACCACCATTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049887.13 ENSMUST00000115101.4 |
||
| CDS GCA 72 bp | GCTGTTGAACAGAGTTTAGATAGCTCTGTAAGTTATTaGTGGTTAAGAAGTTATGGTATTCAAGCCTCAACT | + |
|
Preference number: 6 (lower is better) Translates to: AVEQSLDSSVSY*WLRSYGIQAST Trigger: AGTTGAGGCTTGAATACCATAACTTCTTAACCAGCAATAACTTACAGAGCTATCTAAACTCTGTTCAACAGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049887.13 |
||