Pregenerated sensors for NUPL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000063895Ensembl transcript IDs: ENSMUST00000225805.2
Found 125 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTACTGTTCCTGCAGAGGAACTGGGTTCAGGTCCCAGCACCCACATaGCTCACGACTACATGTAACCCCAGTTCCAGGGGATCCAATGCC | + |
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Preference number: 1 (lower is better) Translates to: LLFLQRNWVQVPAPT*LTTTCNPSSRGSNA Trigger: GGCATTGGATCCCCTGGAACTGGGGTTACATGTAGTCGTGAGTCATGTGGGTGCTGGGACCTGAACCCAGTTCCTCTGCAGGAACAGTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
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| 3UTR CCA 90 bp | CTGCTCTTCCAGAACTCCCAAGTTCAATTCCCAGCAACCACATGGTaGCTCACAACCATCTGCAATGGGGTCTGGTGCCCTCTTCTGGTG | + |
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Preference number: 1 (lower is better) Translates to: LLFQNSQVQFPATTW*LTTICNGVWCPLLV Trigger: CACCAGAAGAGGGCACCAGACCCCATTGCAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATTGAACTTGGGAGTTCTGGAAGAGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
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| 3UTR CCA 90 bp | GACAGGAAGGTGAGACAGGTTCCCACAGCATGCATCTATAAAGCATaGGCAGTTGCCCTTCTCTCTTCAGAGGACTGGCCCCTGAATGCC | + |
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Preference number: 1 (lower is better) Translates to: DRKVRQVPTACIYKA*AVALLSSEDWPLNA Trigger: GGCATTCAGGGGCCAGTCCTCTGAAGAGAGAAGGGCAACTGCCCATGCTTTATAGATGCATGCTGTGGGAACCTGTCTCACCTTCCTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
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| 3UTR TCA 90 bp | ACGACTACATGTAACCCCAGTTCCAGGGGATCCAATGCCCTGTTCTaGCCTCCAGGGTTCCTGGAGGCACATGGCACACATTCATACACT | + |
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Preference number: 1 (lower is better) Translates to: TTTCNPSSRGSNALF*PPGFLEAHGTHSYT Trigger: AGTGTATGAATGTGTGCCATGTGCCTCCAGGAACCCTGGAGGTCAGAACAGGGCATTGGATCCCCTGGAACTGGGGTTACATGTAGTCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
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| 3UTR TCA 90 bp | ATAAAGCATGGGCAGTTGCCCTTCTCTCTTCAGAGGACTGGCCCCTaGATGCCTGCAGAGAGCAAGATCCACAAGAACTCAAACCCCTGG | + |
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Preference number: 1 (lower is better) Translates to: IKHGQLPFSLQRTGP*MPAESKIHKNSNPW Trigger: CCAGGGGTTTGAGTTCTTGTGGATCTTGCTCTCTGCAGGCATTCAGGGGCCAGTCCTCTGAAGAGAGAAGGGCAACTGCCCATGCTTTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
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| 3UTR GCA 90 bp | AGCATGGGCAGTTGCCCTTCTCTCTTCAGAGGACTGGCCCCTGAATaGCTGCAGAGAGCAAGATCCACAAGAACTCAAACCCCTGGTATA | + |
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Preference number: 1 (lower is better) Translates to: SMGSCPSLFRGLAPE*LQRARSTRTQTPGI Trigger: TATACCAGGGGTTTGAGTTCTTGTGGATCTTGCTCTCTGCAGGCATTCAGGGGCCAGTCCTCTGAAGAGAGAAGGGCAACTGCCCATGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
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| 3UTR GCA 90 bp | TCCCAAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCTaGAATGGGGTCTGGTGCCCTCTTCTGGTGTGTTTGAAGACAGTG | + |
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Preference number: 1 (lower is better) Translates to: SQVQFPATTWWLTTI*NGVWCPLLVCLKTV Trigger: CACTGTCTTCAAACACACCAGAAGAGGGCACCAGACCCCATTGCAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATTGAACTTGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
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| 3UTR GCA 90 bp | TTTGCTGGAGCAGGGCTTGATGGGTCAGCGGTTAAGTGCACTGACTaGTCTTCCAGAACTCCCAAGTTCAATTCCCAGCAACCACATGGT | + |
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Preference number: 1 (lower is better) Translates to: FAGAGLDGSAVKCTD*SSRTPKFNSQQPHG Trigger: ACCATGTGGTTGCTGGGAATTGAACTTGGGAGTTCTGGAAGAGCAGTCAGTGCACTTAACCGCTGACCCATCAAGCCCTGCTCCAGCAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
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| 3UTR TCA 90 bp | ACCCAAATTTGTAGTCCCAGTACCCAGGAGGCTGAGACAGGAAGGTaGGACAGGTTCCCACAGCATGCATCTATAAAGCATGGGCAGTTG | + |
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Preference number: 1 (lower is better) Translates to: TQICSPSTQEAETGR*DRFPQHASIKHGQL Trigger: CAACTGCCCATGCTTTATAGATGCATGCTGTGGGAACCTGTCTCACCTTCCTGTCTCAGCCTCCTGGGTACTGGGACTACAAATTTGGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
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| 3UTR CCA 90 bp | TTCCCAGCAACCACATGGTGGCTCACAACCATCTGCAATGGGGTCTaGTGCCCTCTTCTGGTGTGTTTGAAGACAGTGACTGTGATCTTT | + |
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Preference number: 1 (lower is better) Translates to: FPATTWWLTTICNGV*CPLLVCLKTVTVIF Trigger: AAAGATCACAGTCACTGTCTTCAAACACACCAGAAGAGGGCACCAGACCCCATTGCAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
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| 3UTR CCA 90 bp | AGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCTGCAATaGGGTCTGGTGCCCTCTTCTGGTGTGTTTGAAGACAGTGACTGT | + |
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Preference number: 1 (lower is better) Translates to: SSIPSNHMVAHNHLQ*GLVPSSGVFEDSDC Trigger: ACAGTCACTGTCTTCAAACACACCAGAAGAGGGCACCAGACCCCATTGCAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATTGAACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
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| 3UTR GCA 90 bp | CCATTAAAATTTGCTGGAGCAGGGCTTGATGGGTCAGCGGTTAAGTaGACTGACTGCTCTTCCAGAACTCCCAAGTTCAATTCCCAGCAA | + |
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Preference number: 1 (lower is better) Translates to: PLKFAGAGLDGSAVK*TDCSSRTPKFNSQQ Trigger: TTGCTGGGAATTGAACTTGGGAGTTCTGGAAGAGCAGTCAGTGCACTTAACCGCTGACCCATCAAGCCCTGCTCCAGCAAATTTTAATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
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| 3UTR TCA 90 bp | ATGTGTCCCAGGATATCTGTAAAGACAGTTCAACATGTTTGTAGATaGCAGGGTCATGTTGCAATGTCGAAATGTTGGACTCCTAAGTGG | + |
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Preference number: 1 (lower is better) Translates to: MCPRISVKTVQHVCR*QGHVAMSKCWTPKW Trigger: CCACTTAGGAGTCCAACATTTCGACATTGCAACATGACCCTGTCATCTACAAACATGTTGAACTGTCTTTACAGATATCCTGGGACACAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
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| 3UTR CCA 90 bp | AACGTAGGAGCCATCTTTAAAGTCAGTCATTTCAAAACTGTTATCTaGGGATGGAGAGATGTCTCAGCAGTTAAGAGCATTTACTGTTCC | + |
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Preference number: 1 (lower is better) Translates to: NVGAIFKVSHFKTVI*GWRDVSAVKSIYCS Trigger: GGAACAGTAAATGCTCTTAACTGCTGAGACATCTCTCCATCCCCAGATAACAGTTTTGAAATGACTGACTTTAAAGATGGCTCCTACGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
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| 3UTR-3UTR TCA 90 bp | AAAGCATGGGCAGTTGCCCTTCTCTCTTCAGAGGACTGGCCCCTGAATGCCTGCTCCAATGCCCTGTTCTaGCCTCCAGGGTTCCTGGAG | + |
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Preference number: 2 (lower is better) Translates to: KAWAVALLSSEDWPLNACSNALF*PPGFLE Trigger: CTCCAGGAACCCTGGAGGTCAGAACAGGGCATTGGA...GCAGGCATTCAGGGGCCAGTCCTCTGAAGAGAGAAGGGCAACTGCCCATGCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
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| 3UTR-3UTR GCA 90 bp | AAAGCATGGGCAGTTGCCCTTCTCTCTTCAGAGGACTGGCCCCTGAATGCCTGCTTCCAGGGGATCCAATaGCCTGTTCTGACCTCCAGG | + |
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Preference number: 2 (lower is better) Translates to: KAWAVALLSSEDWPLNACFQGIQ*PVLTSR Trigger: CCTGGAGGTCAGAACAGGGCATTGGATCCCCTGGAA...GCAGGCATTCAGGGGCCAGTCCTCTGAAGAGAGAAGGGCAACTGCCCATGCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
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| 3UTR-3UTR CCA 90 bp | CTGCAATGGGGTCTGGTGCCCTCTTCTGGTGTGTTTGAAGACAGTGACTGTGATTTCCTGCAGAGGAACTaGGTTCAGGTCCCAGCACCC | + |
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Preference number: 2 (lower is better) Translates to: LQWGLVPSSGVFEDSDCDFLQRN*VQVPAP Trigger: GGGTGCTGGGACCTGAACCCAGTTCCTCTGCAGGAA...ATCACAGTCACTGTCTTCAAACACACCAGAAGAGGGCACCAGACCCCATTGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
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| 3UTR-3UTR GCA 90 bp | GGAGTGATAGATGTTTGTGAGCAACCATGTGGATGCTGGGAATTGAGGCCAGGTGGACTGGCCCCTGAATaGCTGCAGAGAGCAAGATCC | + |
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Preference number: 2 (lower is better) Translates to: GVIDVCEQPCGCWELRPGGLAPE*LQRARS Trigger: GGATCTTGCTCTCTGCAGGCATTCAGGGGCCAGTCC...ACCTGGCCTCAATTCCCAGCATCCACATGGTTGCTCACAAACATCTATCACTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
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| 3UTR-3UTR TCA 90 bp | AATGGGGTCTGGTGCCCTCTTCTGGTGTGTTTGAAGACAGTGACTGTGATCTTTTGCTGGAAGCAGAGGTaGGCAGATCCCTCTGGAAGG | + |
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Preference number: 2 (lower is better) Translates to: NGVWCPLLVCLKTVTVIFCWKQR*ADPSGR Trigger: CCTTCCAGAGGGATCTGCTCACCTCTGCTTCCAGCA...AAAGATCACAGTCACTGTCTTCAAACACACCAGAAGAGGGCACCAGACCCCATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
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| 3UTR-3UTR TCA 90 bp | GGAGTGATAGATGTTTGTGAGCAACCATGTGGATGCTGGGAATTGAGGCCAGGTAGTGCTCTGAATCGCTaGGCCATTTCTCCAGCCCCT | + |
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Preference number: 2 (lower is better) Translates to: GVIDVCEQPCGCWELRPGSALNR*AISPAP Trigger: AGGGGCTGGAGAAATGGCTCAGCGATTCAGAGCACT...ACCTGGCCTCAATTCCCAGCATCCACATGGTTGCTCACAAACATCTATCACTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
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| 3UTR-3UTR CCA 90 bp | AAAGCATGGGCAGTTGCCCTTCTCTCTTCAGAGGACTGGCCCCTGAATGCCTGCTGGAGTGTGCACTATTaGTGTGTACACAGTTTCACA | + |
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Preference number: 2 (lower is better) Translates to: KAWAVALLSSEDWPLNACWSVHY*CVHSFT Trigger: TGTGAAACTGTGTACACACCAATAGTGCACACTCCA...GCAGGCATTCAGGGGCCAGTCCTCTGAAGAGAGAAGGGCAACTGCCCATGCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
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| 3UTR-3UTR TCA 90 bp | AGCAGAGGTGAGCAGATCCCTCTGGAAGGACAGGCAGTAAGCTATGAAGATGGGCATGACTCTTCAAAGTaGTGGATGCTCTCTGTGCTT | + |
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Preference number: 2 (lower is better) Translates to: SRGEQIPLEGQAVSYEDGHDSSK*WMLSVL Trigger: AAGCACAGAGAGCATCCATCACTTTGAAGAGTCATG...CCCATCTTCATAGCTTACTGCCTGTCCTTCCAGAGGGATCTGCTCACCTCTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
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| 3UTR-3UTR CCA 90 bp | CTGCAATGGGGTCTGGTGCCCTCTTCTGGTGTGTTTGAAGACAGTGACTGTGATGTTCCTGGAGGCACATaGCACACATTCATACACTTG | + |
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Preference number: 2 (lower is better) Translates to: LQWGLVPSSGVFEDSDCDVPGGT*HTFIHL Trigger: CAAGTGTATGAATGTGTGCCATGTGCCTCCAGGAAC...ATCACAGTCACTGTCTTCAAACACACCAGAAGAGGGCACCAGACCCCATTGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
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| 3UTR-3UTR CCA 90 bp | GCACGTGTAAGTGCCTGGTACCTGCAGAGGTCAAAAGAGGTGGGAAAAGGTCAGCAGTGTTGCATTGTTTaGCAAGAAAACAGTCTGGGT | + |
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Preference number: 2 (lower is better) Translates to: ARVSAWYLQRSKEVGKGQQCCIV*QENSLG Trigger: ACCCAGACTGTTTTCTTGCCAAACAATGCAACACTG...CTGACCTTTTCCCACCTCTTTTGACCTCTGCAGGTACCAGGCACTTACACGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
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| 3UTR-3UTR GCA 90 bp | GAATGCCTGCAGAGAGCAAGATCCACAAGAACTCAAACCCCTGGTATAATATTGGGGTCAGCGGTTAAGTaGACTGACTGCTCTTCCAGA | + |
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Preference number: 2 (lower is better) Translates to: ECLQRARSTRTQTPGIILGSAVK*TDCSSR Trigger: TCTGGAAGAGCAGTCAGTGCACTTAACCGCTGACCC...CAATATTATACCAGGGGTTTGAGTTCTTGTGGATCTTGCTCTCTGCAGGCATTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
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| 3UTR-3UTR CCA 90 bp | CTGCAATGGGGTCTGGTGCCCTCTTCTGGTGTGTTTGAAGACAGTGACTGTGATGAAAGAGGCTGTATTTaGCTCCAAGACTATCAGTCT | + |
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Preference number: 2 (lower is better) Translates to: LQWGLVPSSGVFEDSDCDERGCI*LQDYQS Trigger: AGACTGATAGTCTTGGAGCCAAATACAGCCTCTTTC...ATCACAGTCACTGTCTTCAAACACACCAGAAGAGGGCACCAGACCCCATTGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
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| 3UTR-3UTR CCA 90 bp | GCACGTGTAAGTGCCTGGTACCTGCAGAGGTCAAAAGAGGTGGGAAAAGGTCAGGCAATGTCGAAATGTTaGACTCCTAAGTGGATTATG | + |
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Preference number: 2 (lower is better) Translates to: ARVSAWYLQRSKEVGKGQAMSKC*TPKWIM Trigger: CATAATCCACTTAGGAGTCCAACATTTCGACATTGC...CTGACCTTTTCCCACCTCTTTTGACCTCTGCAGGTACCAGGCACTTACACGTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
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| 3UTR-3UTR TCA 90 bp | GGGCACATAATCAAACTGTCTGCTGGAAGCAGAGGTGAGCAGATCCCTCTGGAATTGTGTTGTCCTGGATaGAAATTCTCACACTTGGAT | + |
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Preference number: 2 (lower is better) Translates to: GHIIKLSAGSRGEQIPLELCCPG*KFSHLD Trigger: ATCCAAGTGTGAGAATTTTCATCCAGGACAACACAA...TTCCAGAGGGATCTGCTCACCTCTGCTTCCAGCAGACAGTTTGATTATGTGCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
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| 3UTR-3UTR GCA 90 bp | TTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCTGCAATGGGGTCTGGTAATTTTGCTGGAGTGTaGACTATTGGTGTGTACACA | + |
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Preference number: 2 (lower is better) Translates to: FNSQQPHGGSQPSAMGSGNFAGV*TIGVYT Trigger: TGTGTACACACCAATAGTGCACACTCCAGCAAAATT...ACCAGACCCCATTGCAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
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| 3UTR-3UTR GCA 90 bp | CTGCAGAGAGCAAGATCCACAAGAACTCAAACCCCTGGTATAATATTGTGTAGTAGCATTTACTGTTCCTaGAGAGGAACTGGGTTCAGG | + |
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Preference number: 2 (lower is better) Translates to: LQRARSTRTQTPGIILCSSIYCS*RGTGFR Trigger: CCTGAACCCAGTTCCTCTGCAGGAACAGTAAATGCT...ACTACACAATATTATACCAGGGGTTTGAGTTCTTGTGGATCTTGCTCTCTGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
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| 3UTR-3UTR TCA 90 bp | AATGGGGTCTGGTGCCCTCTTCTGGTGTGTTTGAAGACAGTGACTGTGATCTTTCTTGAGGAATTAACATaGCTCTTCAAAGTGATGGAT | + |
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Preference number: 2 (lower is better) Translates to: NGVWCPLLVCLKTVTVIFLEELT*LFKVMD Trigger: ATCCATCACTTTGAAGAGTCATGTTAATTCCTCAAG...AAAGATCACAGTCACTGTCTTCAAACACACCAGAAGAGGGCACCAGACCCCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
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| 3UTR-3UTR CCA 90 bp | ACTATTGGTGTGTACACAGTTTCACACCTACTCACATTAAAATCCAAGGGCACAACTGTTATCTGGGGATaGAGAGATGTCTCAGCAGTT | + |
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Preference number: 2 (lower is better) Translates to: TIGVYTVSHLLTLKSKGTTVIWG*RDVSAV Trigger: AACTGCTGAGACATCTCTCCATCCCCAGATAACAGT...TGTGCCCTTGGATTTTAATGTGAGTAGGTGTGAAACTGTGTACACACCAATAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
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| 3UTR TCA 72 bp | GGGCAGTTGCCCTTCTCTCTTCAGAGGACTGGCCCCTaGATGCCTGCAGAGAGCAAGATCCACAAGAACTCA | + |
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Preference number: 3 (lower is better) Translates to: GQLPFSLQRTGP*MPAESKIHKNS Trigger: TGAGTTCTTGTGGATCTTGCTCTCTGCAGGCATTCAGGGGCCAGTCCTCTGAAGAGAGAAGGGCAACTGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
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| 3UTR CCA 72 bp | CCCAGCAACCACATGGTGGCTCACAACCATCTGCAATaGGGTCTGGTGCCCTCTTCTGGTGTGTTTGAAGAC | + |
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Preference number: 3 (lower is better) Translates to: PSNHMVAHNHLQ*GLVPSSGVFED Trigger: GTCTTCAAACACACCAGAAGAGGGCACCAGACCCCATTGCAGATGGTTGTGAGCCACCATGTGGTTGCTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
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| 3UTR GCA 72 bp | CAATTCCCAGCAACCACATGGTGGCTCACAACCATCTaGAATGGGGTCTGGTGCCCTCTTCTGGTGTGTTTG | + |
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Preference number: 3 (lower is better) Translates to: QFPATTWWLTTI*NGVWCPLLVCL Trigger: CAAACACACCAGAAGAGGGCACCAGACCCCATTGCAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
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| 3UTR CCA 72 bp | GTGAGACAGGTTCCCACAGCATGCATCTATAAAGCATaGGCAGTTGCCCTTCTCTCTTCAGAGGACTGGCCC | + |
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Preference number: 3 (lower is better) Translates to: VRQVPTACIYKA*AVALLSSEDWP Trigger: GGGCCAGTCCTCTGAAGAGAGAAGGGCAACTGCCCATGCTTTATAGATGCATGCTGTGGGAACCTGTCTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
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| 3UTR GCA 72 bp | GCAGGGCTTGATGGGTCAGCGGTTAAGTGCACTGACTaGTCTTCCAGAACTCCCAAGTTCAATTCCCAGCAA | + |
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Preference number: 3 (lower is better) Translates to: AGLDGSAVKCTD*SSRTPKFNSQQ Trigger: TTGCTGGGAATTGAACTTGGGAGTTCTGGAAGAGCAGTCAGTGCACTTAACCGCTGACCCATCAAGCCCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
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| 3UTR GCA 72 bp | AGTTGCCCTTCTCTCTTCAGAGGACTGGCCCCTGAATaGCTGCAGAGAGCAAGATCCACAAGAACTCAAACC | + |
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Preference number: 3 (lower is better) Translates to: SCPSLFRGLAPE*LQRARSTRTQT Trigger: GGTTTGAGTTCTTGTGGATCTTGCTCTCTGCAGGCATTCAGGGGCCAGTCCTCTGAAGAGAGAAGGGCAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
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| 3UTR CCA 72 bp | TTCCAGAACTCCCAAGTTCAATTCCCAGCAACCACATaGTGGCTCACAACCATCTGCAATGGGGTCTGGTGC | + |
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Preference number: 3 (lower is better) Translates to: FQNSQVQFPATT*WLTTICNGVWC Trigger: GCACCAGACCCCATTGCAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATTGAACTTGGGAGTTCTGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
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| 3UTR-3UTR CAA 90 bp | GCCAGTCATGGGACCCAAATTTGTAGTCCCAGTACCCAGGAGGCTGAGACAGGAACAGTGTTGCATTGTTaGGCAAGAAAACAGTCTGGG | + |
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Preference number: 3 (lower is better) Translates to: ASHGTQICSPSTQEAETGTVLHC*ARKQSG Trigger: CCCAGACTGTTTTCTTGCCAAACAATGCAACACTGT...TCCTGTCTCAGCCTCCTGGGTACTGGGACTACAAATTTGGGTCCCATGACTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
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| 3UTR TCA 72 bp | AGGGCACATAATCAAACTGTCTGCTGGAAGCAGAGGTaGGCAGATCCCTCTGGAAGGACAGGCAGTAAGCTA | + |
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Preference number: 3 (lower is better) Translates to: RAHNQTVCWKQR*ADPSGRTGSKL Trigger: TAGCTTACTGCCTGTCCTTCCAGAGGGATCTGCTCACCTCTGCTTCCAGCAGACAGTTTGATTATGTGCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
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| 3UTR TCA 72 bp | TGTAGTCCCAGTACCCAGGAGGCTGAGACAGGAAGGTaGGACAGGTTCCCACAGCATGCATCTATAAAGCAT | + |
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Preference number: 3 (lower is better) Translates to: CSPSTQEAETGR*DRFPQHASIKH Trigger: ATGCTTTATAGATGCATGCTGTGGGAACCTGTCTCACCTTCCTGTCTCAGCCTCCTGGGTACTGGGACTACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
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| 3UTR GCA 72 bp | TTTGCTGGAGCAGGGCTTGATGGGTCAGCGGTTAAGTaGACTGACTGCTCTTCCAGAACTCCCAAGTTCAAT | + |
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Preference number: 3 (lower is better) Translates to: FAGAGLDGSAVK*TDCSSRTPKFN Trigger: ATTGAACTTGGGAGTTCTGGAAGAGCAGTCAGTGCACTTAACCGCTGACCCATCAAGCCCTGCTCCAGCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
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| 3UTR-3UTR CAA 90 bp | AAAGCATGGGCAGTTGCCCTTCTCTCTTCAGAGGACTGGCCCCTGAATGCCTGCTTTAAGTACTTCTTTTaGTCACCCAAAAGAAAGGGC | + |
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Preference number: 3 (lower is better) Translates to: KAWAVALLSSEDWPLNACFKYFF*SPKRKG Trigger: GCCCTTTCTTTTGGGTGACAAAAAGAAGTACTTAAA...GCAGGCATTCAGGGGCCAGTCCTCTGAAGAGAGAAGGGCAACTGCCCATGCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
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| 3UTR-3UTR CAA 90 bp | CTGCAGAGAGCAAGATCCACAAGAACTCAAACCCCTGGTATAATATTGTGTAGTTTGCTGGAGCAGGGCTaGATGGGTCAGCGGTTAAGT | + |
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Preference number: 3 (lower is better) Translates to: LQRARSTRTQTPGIILCSLLEQG*MGQRLS Trigger: ACTTAACCGCTGACCCATCAAGCCCTGCTCCAGCAA...ACTACACAATATTATACCAGGGGTTTGAGTTCTTGTGGATCTTGCTCTCTGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
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| 3UTR TCA 72 bp | AGGTCCTCTGATAAAGCAACGAGTGCTCTGAATCGCTaGGCCATTTCTCCAGCCCCTATAGTATCACCATTA | + |
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Preference number: 3 (lower is better) Translates to: RSSDKATSALNR*AISPAPIVSPL Trigger: TAATGGTGATACTATAGGGGCTGGAGAAATGGCTCAGCGATTCAGAGCACTCGTTGCTTTATCAGAGGACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
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| 3UTR-3UTR CAA 90 bp | CTGCAGAGAGCAAGATCCACAAGAACTCAAACCCCTGGTATAATATTGTGTAGTCTGGAGTGTGCACTATaGGTGTGTACACAGTTTCAC | + |
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Preference number: 3 (lower is better) Translates to: LQRARSTRTQTPGIILCSLECAL*VCTQFH Trigger: GTGAAACTGTGTACACACCAATAGTGCACACTCCAG...ACTACACAATATTATACCAGGGGTTTGAGTTCTTGTGGATCTTGCTCTCTGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
||
| 3UTR-3UTR CAA 90 bp | GAATGCCTGCAGAGAGCAAGATCCACAAGAACTCAAACCCCTGGTATAATATTGAGTTACAGTGTTGCATaGTTTGGCAAGAAAACAGTC | + |
|
Preference number: 3 (lower is better) Translates to: ECLQRARSTRTQTPGIILSYSVA*FGKKTV Trigger: GACTGTTTTCTTGCCAAACAATGCAACACTGTAACT...CAATATTATACCAGGGGTTTGAGTTCTTGTGGATCTTGCTCTCTGCAGGCATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
||
| 3UTR CCA 72 bp | GCCATCTTTAAAGTCAGTCATTTCAAAACTGTTATCTaGGGATGGAGAGATGTCTCAGCAGTTAAGAGCATT | + |
|
Preference number: 3 (lower is better) Translates to: AIFKVSHFKTVI*GWRDVSAVKSI Trigger: AATGCTCTTAACTGCTGAGACATCTCTCCATCCCCAGATAACAGTTTTGAAATGACTGACTTTAAAGATGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
||
| 3UTR TCA 72 bp | AGGATATCTGTAAAGACAGTTCAACATGTTTGTAGATaGCAGGGTCATGTTGCAATGTCGAAATGTTGGACT | + |
|
Preference number: 3 (lower is better) Translates to: RISVKTVQHVCR*QGHVAMSKCWT Trigger: AGTCCAACATTTCGACATTGCAACATGACCCTGTCATCTACAAACATGTTGAACTGTCTTTACAGATATCCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
||
| 3UTR CCA 72 bp | GGTCATGTTGCAATGTCGAAATGTTGGACTCCTAAGTaGATTATGATACCTACTACAAATATAGTTACAGTG | + |
|
Preference number: 3 (lower is better) Translates to: GHVAMSKCWTPK*IMIPTTNIVTV Trigger: CACTGTAACTATATTTGTAGTAGGTATCATAATCCACTTAGGAGTCCAACATTTCGACATTGCAACATGACC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
||
| CDS-3UTR CCA 90 bp | ACCCCAGTTCCAGGGGATCCAATGCCCTGTTCTGACCTCCAGGGTTCCTGGAGGGCAGGGCAAATGGTGTaGCAGATGCCGCAGGTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: TPVPGDPMPCSDLQGSWRAGQMV*QMPQVY Trigger: GTAAACCTGCGGCATCTGCCACACCATTTGCCCTGC...CCTCCAGGAACCCTGGAGGTCAGAACAGGGCATTGGATCCCCTGGAACTGGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
||
| CDS-3UTR CCA 90 bp | AAAGCATGGGCAGTTGCCCTTCTCTCTTCAGAGGACTGGCCCCTGAATGCCTGCGACAGGCAGGGCAAATaGTGTGGCAGATGCCGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KAWAVALLSSEDWPLNACDRQGK*CGRCRR Trigger: CCTGCGGCATCTGCCACACCATTTGCCCTGCCTGTC...GCAGGCATTCAGGGGCCAGTCCTCTGAAGAGAGAAGGGCAACTGCCCATGCTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
||
| CDS-3UTR CCA 90 bp | AATGGGGTCTGGTGCCCTCTTCTGGTGTGTTTGAAGACAGTGACTGTGATCTTTCGGGGGCCACAGTGGTaGAGCCGAGGGTCCCAGACC | + |
|
Preference number: 4 (lower is better) Translates to: NGVWCPLLVCLKTVTVIFRGPQW*SRGSQT Trigger: GGTCTGGGACCCTCGGCTCCACCACTGTGGCCCCCG...AAAGATCACAGTCACTGTCTTCAAACACACCAGAAGAGGGCACCAGACCCCATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
||
| CDS-3UTR CCA 90 bp | GATATGTCCAACCTATGGCCCATAGGCTACATGTGTCCCAGGATATCTGTAAAGCGCCGGGGGCCACAGTaGTGGAGCCGAGGGTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: DMSNLWPIGYMCPRISVKRRGPQ*WSRGSQ Trigger: CTGGGACCCTCGGCTCCACCACTGTGGCCCCCGGCG...CTTTACAGATATCCTGGGACACATGTAGCCTATGGGCCATAGGTTGGACATATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
||
| CDS-3UTR GCA 90 bp | AAAGCATGGGCAGTTGCCCTTCTCTCTTCAGAGGACTGGCCCCTGAATGCCTGCCATGGCAACGGCTGCTaGGTTTGGCATGGTGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: KAWAVALLSSEDWPLNACHGNGC*VWHGAE Trigger: TTCAGCACCATGCCAAACGCAGCAGCCGTTGCCATG...GCAGGCATTCAGGGGCCAGTCCTCTGAAGAGAGAAGGGCAACTGCCCATGCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
||
| CDS-3UTR TCA 90 bp | AAAGCATGGGCAGTTGCCCTTCTCTCTTCAGAGGACTGGCCCCTGAATGCCTGCTGCTGCCTGTACTGCTaGAGCTGTACCTCAAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: KAWAVALLSSEDWPLNACCCLYC*SCTSNC Trigger: GCAGTTTGAGGTACAGCTTCAGCAGTACAGGCAGCA...GCAGGCATTCAGGGGCCAGTCCTCTGAAGAGAGAAGGGCAACTGCCCATGCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
||
| CDS-3UTR CCA 90 bp | GGGCACATAATCAAACTGTCTGCTGGAAGCAGAGGTGAGCAGATCCCTCTGGAATCCCAGAGACGGCTGTaGCCCTGTAGCAGGCTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: GHIIKLSAGSRGEQIPLESQRRL*PCSRLL Trigger: CAACAGCCTGCTACAGGGCCACAGCCGTCTCTGGGA...TTCCAGAGGGATCTGCTCACCTCTGCTTCCAGCAGACAGTTTGATTATGTGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
||
| CDS-3UTR TCA 90 bp | AAAGCATGGGCAGTTGCCCTTCTCTCTTCAGAGGACTGGCCCCTGAATGCCTGCAGGTTTTCAACATCCTaGCAGATGACAGGAGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KAWAVALLSSEDWPLNACRFSTS*QMTGGR Trigger: CCTGCCTCCTGTCATCTGTCAGGATGTTGAAAACCT...GCAGGCATTCAGGGGCCAGTCCTCTGAAGAGAGAAGGGCAACTGCCCATGCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
||
| CDS-3UTR TCA 90 bp | TTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCTGCAATGGGGTCTGGTGCCAGTGCCAATACCTaGGCCGAATGGCGTTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: FNSQQPHGGSQPSAMGSGASANT*AEWRSK Trigger: TTTGGAACGCCATTCGGCTCAGGTATTGGCACTGGC...ACCAGACCCCATTGCAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
||
| CDS-3UTR GCA 90 bp | AAAGCATGGGCAGTTGCCCTTCTCTCTTCAGAGGACTGGCCCCTGAATGCCTGCTTGATTGCAAGCCAGTaGCAATACCTGAGCCGAATG | + |
|
Preference number: 4 (lower is better) Translates to: KAWAVALLSSEDWPLNACLIASQ*QYLSRM Trigger: CATTCGGCTCAGGTATTGGCACTGGCTTGCAATCAA...GCAGGCATTCAGGGGCCAGTCCTCTGAAGAGAGAAGGGCAACTGCCCATGCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
||
| CDS-3UTR GCA 90 bp | AAAGCATGGGCAGTTGCCCTTCTCTCTTCAGAGGACTGGCCCCTGAATGCCTGCCCTAAGCCACTTGATTaGAAGCCAGTGCCAATACCT | + |
|
Preference number: 4 (lower is better) Translates to: KAWAVALLSSEDWPLNACPKPLD*KPVPIP Trigger: AGGTATTGGCACTGGCTTGCAATCAAGTGGCTTAGG...GCAGGCATTCAGGGGCCAGTCCTCTGAAGAGAGAAGGGCAACTGCCCATGCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
||
| CDS-3UTR CCA 90 bp | AGCAGAGGTGAGCAGATCCCTCTGGAAGGACAGGCAGTAAGCTATGAAGATGGGAACGGCTGCTGCGTTTaGCATGGTGCTGAAAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SRGEQIPLEGQAVSYEDGNGCCV*HGAERS Trigger: ACTCCTTTCAGCACCATGCCAAACGCAGCAGCCGTT...CCCATCTTCATAGCTTACTGCCTGTCCTTCCAGAGGGATCTGCTCACCTCTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
||
| CDS-3UTR CCA 90 bp | AGAGGTGAGCAGATCCCTCTGGAAGGACAGGCAGTAAGCTATGAAGATGGGATAATGTGGAGGCCCCTGTaGTACCGCATCCGAAACCAG | + |
|
Preference number: 4 (lower is better) Translates to: RGEQIPLEGQAVSYEDGIMWRPL*YRIRNQ Trigger: CTGGTTTCGGATGCGGTACCACAGGGGCCTCCACAT...TATCCCATCTTCATAGCTTACTGCCTGTCCTTCCAGAGGGATCTGCTCACCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
||
| CDS-3UTR CCA 90 bp | GCACGTGTAAGTGCCTGGTACCTGCAGAGGTCAAAAGAGGTGGGAAAAGGTCAGTTCCAAATCCAAATGTaGAGGCCCCTGTGGTACCGC | + |
|
Preference number: 4 (lower is better) Translates to: ARVSAWYLQRSKEVGKGQFQIQM*RPLWYR Trigger: GCGGTACCACAGGGGCCTCCACATTTGGATTTGGAA...CTGACCTTTTCCCACCTCTTTTGACCTCTGCAGGTACCAGGCACTTACACGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
||
| CDS-3UTR TCA 90 bp | AGAGCATTTACTGTTCCTGCAGAGGAACTGGGTTCAGGTCCCAGCACCCACATGTTCATTGCTGGCAGCTaGAGTAGGTGCTGTAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RAFTVPAEELGSGPSTHMFIAGS*SRCCSS Trigger: GGAACTACAGCACCTACTTCAGCTGCCAGCAATGAA...CATGTGGGTGCTGGGACCTGAACCCAGTTCCTCTGCAGGAACAGTAAATGCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
||
| CDS-3UTR TCA 90 bp | AAAGCATGGGCAGTTGCCCTTCTCTCTTCAGAGGACTGGCCCCTGAATGCCTGCTTGAGGAGTTATATGTaGATTACTGGCTTGAGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: KAWAVALLSSEDWPLNACLRSYM*ITGLSG Trigger: GCCACTCAAGCCAGTAATTCACATATAACTCCTCAA...GCAGGCATTCAGGGGCCAGTCCTCTGAAGAGAGAAGGGCAACTGCCCATGCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
||
| CDS-3UTR GCA 90 bp | GGGCACATAATCAAACTGTCTGCTGGAAGCAGAGGTGAGCAGATCCCTCTGGAACGCAGATGTTGTTGCTaGTGTTCCTGCACTTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GHIIKLSAGSRGEQIPLERRCCC*CSCTCS Trigger: GGAACAAGTGCAGGAACAGCAGCAACAACATCTGCG...TTCCAGAGGGATCTGCTCACCTCTGCTTCCAGCAGACAGTTTGATTATGTGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
||
| CDS-3UTR GCA 90 bp | AATGGGGTCTGGTGCCCTCTTCTGGTGTGTTTGAAGACAGTGACTGTGATCTTTCTGCTGTGTAAGTGTTaGAGCCATGGCAACGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: NGVWCPLLVCLKTVTVIFLLCKC*SHGNGC Trigger: GCAGCCGTTGCCATGGCTGCAACACTTACACAGCAG...AAAGATCACAGTCACTGTCTTCAAACACACCAGAAGAGGGCACCAGACCCCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
||
| CDS-3UTR CCA 90 bp | TTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCTGCAATGGGGTCTGGTAGCAGATGTAGATGCTaGGGTCACAGAGCTTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: FNSQQPHGGSQPSAMGSGSRCRC*GHRASK Trigger: CTTGGAAGCTCTGTGACCCCAGCATCTACATCTGCT...ACCAGACCCCATTGCAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
||
| CDS-3UTR CCA 90 bp | GGAGTGATAGATGTTTGTGAGCAACCATGTGGATGCTGGGAATTGAGGCCAGGTTCCTCTGCAACCCACTaGCAGCCAATGACAGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GVIDVCEQPCGCWELRPGSSATH*QPMTEA Trigger: AGCTTCTGTCATTGGCTGCCAGTGGGTTGCAGAGGA...ACCTGGCCTCAATTCCCAGCATCCACATGGTTGCTCACAAACATCTATCACTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
||
| CDS-3UTR TCA 90 bp | GGAGTGATAGATGTTTGTGAGCAACCATGTGGATGCTGGGAATTGAGGCCAGGTTCCAAAACCACCAGCTaGAGCAGATGTAGATGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GVIDVCEQPCGCWELRPGSKTTS*SRCRCW Trigger: CCAGCATCTACATCTGCTTCAGCTGGTGGTTTTGGA...ACCTGGCCTCAATTCCCAGCATCCACATGGTTGCTCACAAACATCTATCACTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
||
| CDS-3UTR TCA 90 bp | GCACGTGTAAGTGCCTGGTACCTGCAGAGGTCAAAAGAGGTGGGAAAAGGTCAGTGCACTAAGACTTCCTaGGGGTTTATCTGTTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ARVSAWYLQRSKEVGKGQCTKTS*GFICCS Trigger: GGAACAACAGATAAACCCTCAGGAAGTCTTAGTGCA...CTGACCTTTTCCCACCTCTTTTGACCTCTGCAGGTACCAGGCACTTACACGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
||
| CDS-3UTR CCA 90 bp | AGCAGAGGTGAGCAGATCCCTCTGGAAGGACAGGCAGTAAGCTATGAAGATGGGGCTGTGTTTTCATGTTaGAGTCCAGGTGGTGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SRGEQIPLEGQAVSYEDGAVFSC*SPGGVF Trigger: GAAAACACCACCTGGACTCCAACATGAAAACACAGC...CCCATCTTCATAGCTTACTGCCTGTCCTTCCAGAGGGATCTGCTCACCTCTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
||
| CDS-3UTR TCA 90 bp | GCCAGTCATGGGACCCAAATTTGTAGTCCCAGTACCCAGGAGGCTGAGACAGGAGCATTCTTTAACTCCTaGGCAGTTTCTAACTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: ASHGTQICSPSTQEAETGAFFNS*AVSNFS Trigger: ACTGAAGTTAGAAACTGCTCAGGAGTTAAAGAATGC...TCCTGTCTCAGCCTCCTGGGTACTGGGACTACAAATTTGGGTCCCATGACTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
||
| CDS-3UTR GCA 90 bp | GGAGTGATAGATGTTTGTGAGCAACCATGTGGATGCTGGGAATTGAGGCCAGGTAGACGCAGATGTTGTTaGTGCTGTTCCTGCACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: GVIDVCEQPCGCWELRPGRRRCC*CCSCTC Trigger: ACAAGTGCAGGAACAGCAGCAACAACATCTGCGTCT...ACCTGGCCTCAATTCCCAGCATCCACATGGTTGCTCACAAACATCTATCACTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
||
| CDS-3UTR GCA 90 bp | AGAGGTGAGCAGATCCCTCTGGAAGGACAGGCAGTAAGCTATGAAGATGGGATAAAATGGTGTGGCAGATaGCGCAGGTTTACTGAATCC | + |
|
Preference number: 4 (lower is better) Translates to: RGEQIPLEGQAVSYEDGIKWCGR*RRFTES Trigger: GGATTCAGTAAACCTGCGGCATCTGCCACACCATTT...TATCCCATCTTCATAGCTTACTGCCTGTCCTTCCAGAGGGATCTGCTCACCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
||
| CDS-3UTR GCA 90 bp | GATATGTCCAACCTATGGCCCATAGGCTACATGTGTCCCAGGATATCTGTAAAGGTAGCAGGCTGTTGCTaGTGTGTAAGTGTTGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: DMSNLWPIGYMCPRISVKVAGCC*CVSVAA Trigger: GGCTGCAACACTTACACAGCAGCAACAGCCTGCTAC...CTTTACAGATATCCTGGGACACATGTAGCCTATGGGCCATAGGTTGGACATATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
||
| CDS-3UTR TCA 90 bp | GGAGTGATAGATGTTTGTGAGCAACCATGTGGATGCTGGGAATTGAGGCCAGGTGCTGTGTTTCCACTCTaGAAAAGTGAACCTCCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: GVIDVCEQPCGCWELRPGAVFPL*KSEPPK Trigger: TTTGGGAGGTTCACTTTTTCAGAGTGGAAACACAGC...ACCTGGCCTCAATTCCCAGCATCCACATGGTTGCTCACAAACATCTATCACTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
||
| CDS-3UTR GCA 90 bp | GGGCACATAATCAAACTGTCTGCTGGAAGCAGAGGTGAGCAGATCCCTCTGGAAGTTTTCATCTTTCAGTaGTTTACTGTCCTCTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GHIIKLSAGSRGEQIPLEVFIFQ*FTVLWP Trigger: AGGCCAGAGGACAGTAAAGCACTGAAAGATGAAAAC...TTCCAGAGGGATCTGCTCACCTCTGCTTCCAGCAGACAGTTTGATTATGTGCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
||
| CDS-3UTR CCA 90 bp | TTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCTGCAATGGGGTCTGGTGCCTTGATGTCTTCCTaGACTTTAAGCATTGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: FNSQQPHGGSQPSAMGSGALMSS*TLSIAL Trigger: CAAAGCAATGCTTAAAGTCCAGGAAGACATCAAGGC...ACCAGACCCCATTGCAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
||
| CDS-3UTR CCA 90 bp | AGCAGAGGTGAGCAGATCCCTCTGGAAGGACAGGCAGTAAGCTATGAAGATGGGAATTACTGGCTTGAGTaGCAAGATGGTTTTCTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: SRGEQIPLEGQAVSYEDGNYWLE*QDGFLV Trigger: AACTAGAAAACCATCTTGCCACTCAAGCCAGTAATT...CCCATCTTCATAGCTTACTGCCTGTCCTTCCAGAGGGATCTGCTCACCTCTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
||
| CDS-3UTR TCA 90 bp | GATATGTCCAACCTATGGCCCATAGGCTACATGTGTCCCAGGATATCTGTAAAGTGTGAATTACTGGCTTaGGTGGCAAGATGGTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: DMSNLWPIGYMCPRISVKCELLA*VARWFS Trigger: AGAAAACCATCTTGCCACTCAAGCCAGTAATTCACA...CTTTACAGATATCCTGGGACACATGTAGCCTATGGGCCATAGGTTGGACATATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
||
| CDS-3UTR GCA 90 bp | CTGCAGAGAGCAAGATCCACAAGAACTCAAACCCCTGGTATAATATTGTGTAGTAGTAGTAACTCTGGGTaGATTCTGCCACTTCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LQRARSTRTQTPGIILCSSSNSG*ILPLLG Trigger: GCCAAGAAGTGGCAGAATGCACCCAGAGTTACTACT...ACTACACAATATTATACCAGGGGTTTGAGTTCTTGTGGATCTTGCTCTCTGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
||
| CDS-3UTR GCA 90 bp | AACGTAGGAGCCATCTTTAAAGTCAGTCATTTCAAAACTGTTATCTGGGGATGGCCTGTAGCAGGCTGTTaGTGCTGTGTAAGTGTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: NVGAIFKVSHFKTVIWGWPVAGC*CCVSVA Trigger: TGCAACACTTACACAGCAGCAACAGCCTGCTACAGG...CCATCCCCAGATAACAGTTTTGAAATGACTGACTTTAAAGATGGCTCCTACGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
||
| CDS-3UTR TCA 90 bp | ACTATTGGTGTGTACACAGTTTCACACCTACTCACATTAAAATCCAAGGGCACACAACATCCTGACAGATaGCAGGAGGCAGGTTTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: TIGVYTVSHLLTLKSKGTQHPDR*QEAGFH Trigger: ATGAAAACCTGCCTCCTGTCATCTGTCAGGATGTTG...TGTGCCCTTGGATTTTAATGTGAGTAGGTGTGAAACTGTGTACACACCAATAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
||
| CDS-3UTR GCA 90 bp | GAATGCCTGCAGAGAGCAAGATCCACAAGAACTCAAACCCCTGGTATAATATTGAGTTGTGGCTGGTGTTaGTCCCAAGTTATTCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: ECLQRARSTRTQTPGIILSCGWC*SQVIQS Trigger: ACTTTGAATAACTTGGGAGCAACACCAGCCACAACT...CAATATTATACCAGGGGTTTGAGTTCTTGTGGATCTTGCTCTCTGCAGGCATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
||
| CDS-3UTR CCA 90 bp | CTGCAGAGAGCAAGATCCACAAGAACTCAAACCCCTGGTATAATATTGTGTAGTTGCTTTACTGTCCTCTaGCCTTGTTCCCGTTTTATC | + |
|
Preference number: 4 (lower is better) Translates to: LQRARSTRTQTPGIILCSCFTVL*PCSRFI Trigger: GATAAAACGGGAACAAGGCCAGAGGACAGTAAAGCA...ACTACACAATATTATACCAGGGGTTTGAGTTCTTGTGGATCTTGCTCTCTGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
||
| CDS-3UTR GCA 90 bp | CTGCAGAGAGCAAGATCCACAAGAACTCAAACCCCTGGTATAATATTGTGTAGTCTGGACTTTAAGCATTaGTTTGGAAGACATTCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LQRARSTRTQTPGIILCSLDFKH*FGRHSA Trigger: AGCCGAATGTCTTCCAAAGCAATGCTTAAAGTCCAG...ACTACACAATATTATACCAGGGGTTTGAGTTCTTGTGGATCTTGCTCTCTGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
||
| CDS-3UTR CCA 90 bp | CTGCAGAGAGCAAGATCCACAAGAACTCAAACCCCTGGTATAATATTGTGTAGTTGTTGTAGTTGTGGCTaGTGTTGCTCCCAAGTTATT | + |
|
Preference number: 4 (lower is better) Translates to: LQRARSTRTQTPGIILCSCCSCG*CCSQVI Trigger: AATAACTTGGGAGCAACACCAGCCACAACTACAACA...ACTACACAATATTATACCAGGGGTTTGAGTTCTTGTGGATCTTGCTCTCTGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
||
| CDS-3UTR TCA 90 bp | ACTATTGGTGTGTACACAGTTTCACACCTACTCACATTAAAATCCAAGGGCACACTTGTTTCTGTTCCTTaGCAAATTTCTGGAGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: TIGVYTVSHLLTLKSKGTLVSVP*QISGGF Trigger: AAAACCTCCAGAAATTTGTCAAGGAACAGAAACAAG...TGTGCCCTTGGATTTTAATGTGAGTAGGTGTGAAACTGTGTACACACCAATAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
||
| 3UTR CAA 72 bp | TGGATTATGATACCTACTACAAATATAGTTACAGTGTaGCATTGTTTGGCAAGAAAACAGTCTGGGTGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: WIMIPTTNIVTV*HCLARKQSGCS Trigger: TGAACACCCAGACTGTTTTCTTGCCAAACAATGCAACACTGTAACTATATTTGTAGTAGGTATCATAATCCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
||
| CDS CCA 90 bp | CGAAGGAGAAGCCGCTGCCCGCTCCGGTCCCGCCGGGGGCCACAGTaGTGGAGCCGAGGGTCCCAGACCCGAAGGAGAACCCCGTGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: RRRSRCPLRSRRGPQ*WSRGSQTRRRTPWP Trigger: TGGCCACGGGGTTCTCCTTCGGGTCTGGGACCCTCGGCTCCACCACTGTGGCCCCCGGCGGGACCGGAGCGGGCAGCGGCTTCTCCTTCG 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
||
| CDS GCA 90 bp | AGACGGCTGTGGCCCTGTAGCAGGCTGTTGCTGCTGTGTAAGTGTTaGAGCCATGGCAACGGCTGCTGCGTTTGGCATGGTGCTGAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: RRLWPCSRLLLLCKC*SHGNGCCVWHGAER Trigger: CCTTTCAGCACCATGCCAAACGCAGCAGCCGTTGCCATGGCTGCAACACTTACACAGCAGCAACAGCCTGCTACAGGGCCACAGCCGTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
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| CDS GCA 90 bp | AGCAGGCTGTTGCTGCTGTGTAAGTGTTGCAGCCATGGCAACGGCTaGTGCGTTTGGCATGGTGCTGAAAGGAGTGGGTCCAGTAGTAAC | + |
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Preference number: 5 (lower is better) Translates to: SRLLLLCKCCSHGNG*CVWHGAERSGSSSN Trigger: GTTACTACTGGACCCACTCCTTTCAGCACCATGCCAAACGCAGCAGCCGTTGCCATGGCTGCAACACTTACACAGCAGCAACAGCCTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
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| CDS CCA 90 bp | TTGCTGCTGTGTAAGTGTTGCAGCCATGGCAACGGCTGCTGCGTTTaGCATGGTGCTGAAAGGAGTGGGTCCAGTAGTAACTCTGGGTGC | + |
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Preference number: 5 (lower is better) Translates to: LLLCKCCSHGNGCCV*HGAERSGSSSNSGC Trigger: GCACCCAGAGTTACTACTGGACCCACTCCTTTCAGCACCATGCCAAACGCAGCAGCCGTTGCCATGGCTGCAACACTTACACAGCAGCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
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| CDS GCA 90 bp | AGGCTGTTGCTGCTGTGTAAGTGTTGCAGCCATGGCAACGGCTGCTaGGTTTGGCATGGTGCTGAAAGGAGTGGGTCCAGTAGTAACTCT | + |
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Preference number: 5 (lower is better) Translates to: RLLLLCKCCSHGNGC*VWHGAERSGSSSNS Trigger: AGAGTTACTACTGGACCCACTCCTTTCAGCACCATGCCAAACGCAGCAGCCGTTGCCATGGCTGCAACACTTACACAGCAGCAACAGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
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| CDS-3UTR CAA 90 bp | GGGCACATAATCAAACTGTCTGCTGGAAGCAGAGGTGAGCAGATCCCTCTGGAACCACCAAGGCCTTCATaGCTGGCAGCTGAAGTAGGT | + |
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Preference number: 5 (lower is better) Translates to: GHIIKLSAGSRGEQIPLEPPRPS*LAAEVG Trigger: ACCTACTTCAGCTGCCAGCAATGAAGGCCTTGGTGG...TTCCAGAGGGATCTGCTCACCTCTGCTTCCAGCAGACAGTTTGATTATGTGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
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| CDS TCA 90 bp | AGTGGCAGGCTTAGATCCAAAGAGGCCTGTTCCAAAACCACCAGCTaGAGCAGATGTAGATGCTGGGGTCACAGAGCTTCCAAGAGATCC | + |
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Preference number: 5 (lower is better) Translates to: SGRLRSKEACSKTTS*SRCRCWGHRASKRS Trigger: GGATCTCTTGGAAGCTCTGTGACCCCAGCATCTACATCTGCTTCAGCTGGTGGTTTTGGAACAGGCCTCTTTGGATCTAAGCCTGCCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
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| CDS-3UTR CAA 90 bp | AGAGCATTTACTGTTCCTGCAGAGGAACTGGGTTCAGGTCCCAGCACCCACATGTACTGTCCTCTGGCCTaGTTCCCGTTTTATCACTCT | + |
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Preference number: 5 (lower is better) Translates to: RAFTVPAEELGSGPSTHMYCPLA*FPFYHS Trigger: AGAGTGATAAAACGGGAACAAGGCCAGAGGACAGTA...CATGTGGGTGCTGGGACCTGAACCCAGTTCCTCTGCAGGAACAGTAAATGCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
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| CDS-3UTR CAA 90 bp | AGAGGTGAGCAGATCCCTCTGGAAGGACAGGCAGTAAGCTATGAAGATGGGATATGGATGCTGCTGGAGTaGATGTCAGAGCAGATGAGA | + |
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Preference number: 5 (lower is better) Translates to: RGEQIPLEGQAVSYEDGIWMLLE*MSEQMR Trigger: TCTCATCTGCTCTGACATCAACTCCAGCAGCATCCA...TATCCCATCTTCATAGCTTACTGCCTGTCCTTCCAGAGGGATCTGCTCACCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
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| CDS-3UTR CAA 90 bp | GAATGCCTGCAGAGAGCAAGATCCACAAGAACTCAAACCCCTGGTATAATATTGCCCTGTAGCAGGCTGTaGCTGCTGTGTAAGTGTTGC | + |
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Preference number: 5 (lower is better) Translates to: ECLQRARSTRTQTPGIILPCSRL*LLCKCC Trigger: GCAACACTTACACAGCAGCAACAGCCTGCTACAGGG...CAATATTATACCAGGGGTTTGAGTTCTTGTGGATCTTGCTCTCTGCAGGCATTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
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| CDS-3UTR CAA 90 bp | TTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCTGCAATGGGGTCTGGTCAAATCCTCCAAGGTTaGAAGAACCTAAGCCACTTG | + |
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Preference number: 5 (lower is better) Translates to: FNSQQPHGGSQPSAMGSGQILQG*KNLSHL Trigger: CAAGTGGCTTAGGTTCTTCAAACCTTGGAGGATTTG...ACCAGACCCCATTGCAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
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| CDS-3UTR CAA 90 bp | GATATGTCCAACCTATGGCCCATAGGCTACATGTGTCCCAGGATATCTGTAAAGCCAAGAGATCCAAAGTaGAGTCCCACAGAAGGTGTG | + |
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Preference number: 5 (lower is better) Translates to: DMSNLWPIGYMCPRISVKPRDPK*SPTEGV Trigger: CACACCTTCTGTGGGACTCAACTTTGGATCTCTTGG...CTTTACAGATATCCTGGGACACATGTAGCCTATGGGCCATAGGTTGGACATATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
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| CDS-3UTR CAA 90 bp | GCCAGTCATGGGACCCAAATTTGTAGTCCCAGTACCCAGGAGGCTGAGACAGGAACTTTAAGCATTGCTTaGGAAGACATTCGGCTAATT | + |
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Preference number: 5 (lower is better) Translates to: ASHGTQICSPSTQEAETGTLSIA*EDIRLI Trigger: AATTAGCCGAATGTCTTCCAAAGCAATGCTTAAAGT...TCCTGTCTCAGCCTCCTGGGTACTGGGACTACAAATTTGGGTCCCATGACTGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
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| CDS-3UTR CAA 90 bp | AGAGGTGAGCAGATCCCTCTGGAAGGACAGGCAGTAAGCTATGAAGATGGGATAAGCTGTGTTTTCATGTaGGAGTCCAGGTGGTGTTTT | + |
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Preference number: 5 (lower is better) Translates to: RGEQIPLEGQAVSYEDGISCVFM*ESRWCF Trigger: AAAACACCACCTGGACTCCAACATGAAAACACAGCT...TATCCCATCTTCATAGCTTACTGCCTGTCCTTCCAGAGGGATCTGCTCACCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
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| CDS GCA 90 bp | CTAGTTCCAAATCCTCCAAGGTTTGAAGAACCTAAGCCACTTGATTaGAAGCCAGTGCCAATACCTGAGCCGAATGGCGTTCCAAAACTA | + |
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Preference number: 5 (lower is better) Translates to: LVPNPPRFEEPKPLD*KPVPIPEPNGVPKL Trigger: TAGTTTTGGAACGCCATTCGGCTCAGGTATTGGCACTGGCTTGCAATCAAGTGGCTTAGGTTCTTCAAACCTTGGAGGATTTGGAACTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
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| CDS-3UTR CAA 90 bp | AGAGCATTTACTGTTCCTGCAGAGGAACTGGGTTCAGGTCCCAGCACCCACATGACTTGTTTCTGTTCCTaGACAAATTTCTGGAGGTTT | + |
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Preference number: 5 (lower is better) Translates to: RAFTVPAEELGSGPSTHMTCFCS*TNFWRF Trigger: AAACCTCCAGAAATTTGTCAAGGAACAGAAACAAGT...CATGTGGGTGCTGGGACCTGAACCCAGTTCCTCTGCAGGAACAGTAAATGCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
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| CDS GCA 90 bp | CAGAAGCTGCTTCAGGGCCTTGATGTCTTCCTGGACTTTAAGCATTaGTTTGGAAGACATTCGGCTAATTTCTTCTTGGACTTGTTTCTG | + |
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Preference number: 5 (lower is better) Translates to: QKLLQGLDVFLDFKH*FGRHSANFFLDLFL Trigger: CAGAAACAAGTCCAAGAAGAAATTAGCCGAATGTCTTCCAAAGCAATGCTTAAAGTCCAGGAAGACATCAAGGCCCTGAAGCAGCTTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
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| CDS-3UTR CAA 90 bp | ACTATTGGTGTGTACACAGTTTCACACCTACTCACATTAAAATCCAAGGGCACAGTCCGAGACCTGATGTaGCTGTGTTTCCACTCTGAA | + |
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Preference number: 5 (lower is better) Translates to: TIGVYTVSHLLTLKSKGTVRDLM*LCFHSE Trigger: TTCAGAGTGGAAACACAGCAACATCAGGTCTCGGAC...TGTGCCCTTGGATTTTAATGTGAGTAGGTGTGAAACTGTGTACACACCAATAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
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| CDS-3UTR CAA 90 bp | AACGTAGGAGCCATCTTTAAAGTCAGTCATTTCAAAACTGTTATCTGGGGATGGAAGAACCTAAGCCACTaGATTGCAAGCCAGTGCCAA | + |
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Preference number: 5 (lower is better) Translates to: NVGAIFKVSHFKTVIWGWKNLSH*IASQCQ Trigger: TTGGCACTGGCTTGCAATCAAGTGGCTTAGGTTCTT...CCATCCCCAGATAACAGTTTTGAAATGACTGACTTTAAAGATGGCTCCTACGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
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| CDS-3UTR CAA 90 bp | CTGCAGAGAGCAAGATCCACAAGAACTCAAACCCCTGGTATAATATTGTGTAGTTCGGCTAATTTCTTCTaGGACTTGTTTCTGTTCCTT | + |
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Preference number: 5 (lower is better) Translates to: LQRARSTRTQTPGIILCSSANFF*DLFLFL Trigger: AAGGAACAGAAACAAGTCCAAGAAGAAATTAGCCGA...ACTACACAATATTATACCAGGGGTTTGAGTTCTTGTGGATCTTGCTCTCTGCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
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| CDS TCA 90 bp | GGTGTTTTCTGGGTTCTTAAAGCTATTTCGGCATTCTTTAACTCCTaGGCAGTTTCTAACTTCAGTTTGTCAATATTGAGTGTATTCCTC | + |
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Preference number: 5 (lower is better) Translates to: GVFWVLKAISAFFNS*AVSNFSLSILSVFL Trigger: GAGGAATACACTCAATATTGACAAACTGAAGTTAGAAACTGCTCAGGAGTTAAAGAATGCCGAAATAGCTTTAAGAACCCAGAAAACACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
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| CDS GCA 72 bp | TGGCCCTGTAGCAGGCTGTTGCTGCTGTGTAAGTGTTaGAGCCATGGCAACGGCTGCTGCGTTTGGCATGGT | + |
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Preference number: 6 (lower is better) Translates to: WPCSRLLLLCKC*SHGNGCCVWHG Trigger: ACCATGCCAAACGCAGCAGCCGTTGCCATGGCTGCAACACTTACACAGCAGCAACAGCCTGCTACAGGGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
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| CDS GCA 72 bp | CTGCTGTGTAAGTGTTGCAGCCATGGCAACGGCTGCTaGGTTTGGCATGGTGCTGAAAGGAGTGGGTCCAGT | + |
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Preference number: 6 (lower is better) Translates to: LLCKCCSHGNGC*VWHGAERSGSS Trigger: ACTGGACCCACTCCTTTCAGCACCATGCCAAACGCAGCAGCCGTTGCCATGGCTGCAACACTTACACAGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
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| CDS GCA 72 bp | TTGCTGCTGTGTAAGTGTTGCAGCCATGGCAACGGCTaGTGCGTTTGGCATGGTGCTGAAAGGAGTGGGTCC | + |
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Preference number: 6 (lower is better) Translates to: LLLCKCCSHGNG*CVWHGAERSGS Trigger: GGACCCACTCCTTTCAGCACCATGCCAAACGCAGCAGCCGTTGCCATGGCTGCAACACTTACACAGCAGCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
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| CDS CAA 90 bp | GCAGATGTAGATGCTGGGGTCACAGAGCTTCCAAGAGATCCAAAGTaGAGTCCCACAGAAGGTGTGCTAGACGCGACGGTCCCGAAGGAG | + |
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Preference number: 6 (lower is better) Translates to: ADVDAGVTELPRDPK*SPTEGVLDATVPKE Trigger: CTCCTTCGGGACCGTCGCGTCTAGCACACCTTCTGTGGGACTCAACTTTGGATCTCTTGGAAGCTCTGTGACCCCAGCATCTACATCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
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| CDS CCA 72 bp | TGTAAGTGTTGCAGCCATGGCAACGGCTGCTGCGTTTaGCATGGTGCTGAAAGGAGTGGGTCCAGTAGTAAC | + |
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Preference number: 6 (lower is better) Translates to: CKCCSHGNGCCV*HGAERSGSSSN Trigger: GTTACTACTGGACCCACTCCTTTCAGCACCATGCCAAACGCAGCAGCCGTTGCCATGGCTGCAACACTTACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
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| CDS TCA 72 bp | TTTTGTCCGAGACCTGATGTTGCTGTGTTTCCACTCTaGAAAAGTGAACCTCCCAAACCAGCTAAGGCTCCC | + |
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Preference number: 6 (lower is better) Translates to: FCPRPDVAVFPL*KSEPPKPAKAP Trigger: GGGAGCCTTAGCTGGTTTGGGAGGTTCACTTTTTCAGAGTGGAAACACAGCAACATCAGGTCTCGGACAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
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| CDS GCA 72 bp | AATCCTCCAAGGTTTGAAGAACCTAAGCCACTTGATTaGAAGCCAGTGCCAATACCTGAGCCGAATGGCGTT | + |
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Preference number: 6 (lower is better) Translates to: NPPRFEEPKPLD*KPVPIPEPNGV Trigger: AACGCCATTCGGCTCAGGTATTGGCACTGGCTTGCAATCAAGTGGCTTAGGTTCTTCAAACCTTGGAGGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
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| CDS CAA 72 bp | GATGAGGTACTAAAGTCTATACCACCAAGGCCTTCATaGCTGGCAGCTGAAGTAGGTGCTGTAGTTCCCAAA | + |
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Preference number: 6 (lower is better) Translates to: DEVLKSIPPRPS*LAAEVGAVVPK Trigger: TTTGGGAACTACAGCACCTACTTCAGCTGCCAGCAATGAAGGCCTTGGTGGTATAGACTTTAGTACCTCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
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| CDS CAA 72 bp | TTCCAAATCCTCCAAGGTTTGAAGAACCTAAGCCACTaGATTGCAAGCCAGTGCCAATACCTGAGCCGAATG | + |
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Preference number: 6 (lower is better) Translates to: FQILQGLKNLSH*IASQCQYLSRM Trigger: CATTCGGCTCAGGTATTGGCACTGGCTTGCAATCAAGTGGCTTAGGTTCTTCAAACCTTGGAGGATTTGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
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| CDS CAA 90 bp | AGCTGCTTCAGGGCCTTGATGTCTTCCTGGACTTTAAGCATTGCTTaGGAAGACATTCGGCTAATTTCTTCTTGGACTTGTTTCTGTTCC | + |
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Preference number: 6 (lower is better) Translates to: SCFRALMSSWTLSIA*EDIRLISSWTCFCS Trigger: GGAACAGAAACAAGTCCAAGAAGAAATTAGCCGAATGTCTTCCAAAGCAATGCTTAAAGTCCAGGAAGACATCAAGGCCCTGAAGCAGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
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| CDS CAA 72 bp | AGGGCCTTGATGTCTTCCTGGACTTTAAGCATTGCTTaGGAAGACATTCGGCTAATTTCTTCTTGGACTTGT | + |
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Preference number: 6 (lower is better) Translates to: RALMSSWTLSIA*EDIRLISSWTC Trigger: ACAAGTCCAAGAAGAAATTAGCCGAATGTCTTCCAAAGCAATGCTTAAAGTCCAGGAAGACATCAAGGCCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
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| CDS CCA 72 bp | AATCTTGAGGAGTTATATGTGAATTACTGGCTTGAGTaGCAAGATGGTTTTCTAGTTCTTCAATCTGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: NLEELYVNYWLE*QDGFLVLQSAA Trigger: GGCAGCAGATTGAAGAACTAGAAAACCATCTTGCCACTCAAGCCAGTAATTCACATATAACTCCTCAAGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225805.2 |
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