Pregenerated sensors for NUP88 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040667Ensembl transcript IDs: ENSMUST00000035283.11, ENSMUST00000108530.2, ENSMUST00000108531.8, ENSMUST00000178253.8
Found 185 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTCAAAGGAGTCTGGAGTTTCAGCCAGAATGCGCAGTGGAGACTCTaGAACTTCAGCATCTTCTTGGGTACAGAGCAGGGGAGGAGATGC | + |
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Preference number: 1 (lower is better) Translates to: LKGVWSFSQNAQWRL*NFSIFLGTEQGRRC Trigger: GCATCTCCTCCCCTGCTCTGTACCCAAGAAGATGCTGAAGTTGCAGAGTCTCCACTGCGCATTCTGGCTGAAACTCCAGACTCCTTTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178253.8 |
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| 3UTR CCA 90 bp | TTCATAGGTACTGGTGATGCAGATCATTGTGGGCCCCAGGATGTCTaGGACGATCCAGAATCCTCGAATTGGAGCTGGCTGCACGGCAAT | + |
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Preference number: 1 (lower is better) Translates to: FIGTGDADHCGPQDV*DDPESSNWSWLHGN Trigger: ATTGCCGTGCAGCCAGCTCCAATTCGAGGATTCTGGATCGTCCCAGACATCCTGGGGCCCACAATGATCTGCATCACCAGTACCTATGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178253.8 |
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| 3UTR TCA 90 bp | AGAATGTACTGTTCTCGGAACACCTGGGTGGCTCTGCTGATAAGCTaGAGACACTCCTCGGGAGGGGGAGCCAAATCCTTTTCAGATGAT | + |
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Preference number: 1 (lower is better) Translates to: RMYCSRNTWVALLIS*RHSSGGGAKSFSDD Trigger: ATCATCTGAAAAGGATTTGGCTCCCCCTCCCGAGGAGTGTCTTCAGCTTATCAGCAGAGCCACCCAGGTGTTCCGAGAACAGTACATTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178253.8 |
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| 3UTR TCA 90 bp | AAGCTGAAGACACTCCTCGGGAGGGGGAGCCAAATCCTTTTCAGATaGTTTGAGAAATGCTGGGTTGGCAGCACTACGCTGCAAGATTCT | + |
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Preference number: 1 (lower is better) Translates to: KLKTLLGRGSQILFR*FEKCWVGSTTLQDS Trigger: AGAATCTTGCAGCGTAGTGCTGCCAACCCAGCATTTCTCAAATCATCTGAAAAGGATTTGGCTCCCCCTCCCGAGGAGTGTCTTCAGCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178253.8 |
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| 3UTR GCA 90 bp | CAAACAGAGTATAGCACAGGCATCGTAACCGTAGTTATCTTCAGCTaGAGGATGCATAGGCAGTGGGCCCAACAGCTTCCCAATATTCCC | + |
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Preference number: 1 (lower is better) Translates to: QTEYSTGIVTVVIFS*RMHRQWAQQLPNIP Trigger: GGGAATATTGGGAAGCTGTTGGGCCCACTGCCTATGCATCCTGCAGCTGAAGATAACTACGGTTACGATGCCTGTGCTATACTCTGTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178253.8 |
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| 3UTR CCA 90 bp | AATATGCTTCTCAAAGGAGTCTGGAGTTTCAGCCAGAATGCGCAGTaGAGACTCTGCAACTTCAGCATCTTCTTGGGTACAGAGCAGGGG | + |
|
Preference number: 1 (lower is better) Translates to: NMLLKGVWSFSQNAQ*RLCNFSIFLGTEQG Trigger: CCCCTGCTCTGTACCCAAGAAGATGCTGAAGTTGCAGAGTCTCCACTGCGCATTCTGGCTGAAACTCCAGACTCCTTTGAGAAGCATATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178253.8 |
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| 3UTR TCA 90 bp | GCTGGACACACACACAGGCCTAGCCTCTGTTTTGGTGTTTATAAATaGCTTAGACCCGTAATCTCAACACTCAGAGACTGGGGCAGGAGT | + |
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Preference number: 1 (lower is better) Translates to: AGHTHRPSLCFGVYK*LRPVISTLRDWGRS Trigger: ACTCCTGCCCCAGTCTCTGAGTGTTGAGATTACGGGTCTAAGTCATTTATAAACACCAAAACAGAGGCTAGGCCTGTGTGTGTGTCCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178253.8 |
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| 3UTR TCA 90 bp | GGGTGTCTGGGGCTCACGGAGAGAATAAATTCTTATCACGTTGTCTaGTGTCAACAGCACTATGTGGGGATCCAGCATCTCACTTGGATA | + |
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Preference number: 1 (lower is better) Translates to: GCLGLTERINSYHVV*CQQHYVGIQHLTWI Trigger: TATCCAAGTGAGATGCTGGATCCCCACATAGTGCTGTTGACATCAGACAACGTGATAAGAATTTATTCTCTCCGTGAGCCCCAGACACCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178253.8 |
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| 3UTR GCA 90 bp | TGTCAACAGCACTATGTGGGGATCCAGCATCTCACTTGGATACCATaGAGCATGCTTCAGAGTCAGAGAGGTAGAGCTGGTGAAAAATCT | + |
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Preference number: 1 (lower is better) Translates to: CQQHYVGIQHLTWIP*SMLQSQRGRAGEKS Trigger: AGATTTTTCACCAGCTCTACCTCTCTGACTCTGAAGCATGCTGCATGGTATCCAAGTGAGATGCTGGATCCCCACATAGTGCTGTTGACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178253.8 |
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| 3UTR GCA 90 bp | AGAAATGCTGGGTTGGCAGCACTACGCTGCAAGATTCTTTTAATATaGTTCTCAAAGGAGTCTGGAGTTTCAGCCAGAATGCGCAGTGGA | + |
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Preference number: 1 (lower is better) Translates to: RNAGLAALRCKILLI*FSKESGVSARMRSG Trigger: TCCACTGCGCATTCTGGCTGAAACTCCAGACTCCTTTGAGAAGCATATTAAAAGAATCTTGCAGCGTAGTGCTGCCAACCCAGCATTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178253.8 |
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| 3UTR CCA 90 bp | AGCACTACGCTGCAAGATTCTTTTAATATGCTTCTCAAAGGAGTCTaGAGTTTCAGCCAGAATGCGCAGTGGAGACTCTGCAACTTCAGC | + |
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Preference number: 1 (lower is better) Translates to: STTLQDSFNMLLKGV*SFSQNAQWRLCNFS Trigger: GCTGAAGTTGCAGAGTCTCCACTGCGCATTCTGGCTGAAACTCCAGACTCCTTTGAGAAGCATATTAAAAGAATCTTGCAGCGTAGTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178253.8 |
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| 3UTR TCA 90 bp | TTATGTGTTCACCCCTGTTTGATGGCGTTGCCTAGATGTCGCAGTTaGTCAGGTATCAGCTGTAACTCTTTCTTCATGTCTCTCTCACTG | + |
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Preference number: 1 (lower is better) Translates to: LCVHPCLMALPRCRS*SGISCNSFFMSLSL Trigger: CAGTGAGAGAGACATGAAGAAAGAGTTACAGCTGATACCTGATCAACTGCGACATCTAGGCAACGCCATCAAACAGGGGTGAACACATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178253.8 |
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| 3UTR CCA 90 bp | CACGTAGGTAAGGAAGGTCTCCCCATTCTCATACAGGATGTACAGTaGATACGCCACCACATCTCTGTCTTTCTGTTCAAATATATTCTT | + |
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Preference number: 1 (lower is better) Translates to: HVGKEGLPILIQDVQ*IRHHISVFLFKYIL Trigger: AAGAATATATTTGAACAGAAAGACAGAGATGTGGTGGCGTATCCACTGTACATCCTGTATGAGAATGGGGAGACCTTCCTTACCTACGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178253.8 |
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| 3UTR CCA 90 bp | TGCCATAAGTCCTTTACTTCCGATAAGTGCTACATGATGTTGGGTTaGACTCAACAAGACTTGATGGATTTCAAACAAGGGTGGATTAAT | + |
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Preference number: 1 (lower is better) Translates to: CHKSFTSDKCYMMLG*TQQDLMDFKQGWIN Trigger: ATTAATCCACCCTTGTTTGAAATCCATCAAGTCTTGTTGAGTCCAACCCAACATCATGTAGCACTTATCGGAAGTAAAGGACTTATGGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178253.8 |
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| 3UTR-3UTR GCA 90 bp | GGGTACAGAGCAGGGGAGGAGATGCTGGGTGGACTGTACTTAATAAAGGCCGTACTCACTTGGATACCATaGAGCATGCTTCAGAGTCAG | + |
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Preference number: 2 (lower is better) Translates to: GYRAGEEMLGGLYLIKAVLTWIP*SMLQSQ Trigger: CTGACTCTGAAGCATGCTGCATGGTATCCAAGTGAG...TACGGCCTTTATTAAGTACAGTCCACCCAGCATCTCCTCCCCTGCTCTGTACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178253.8 |
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| 3UTR-3UTR TCA 90 bp | ATCTCTGTGCAGTTTAATTGGGCAGGAAAAGTCAGAGGCAAAGGGATCGTCCTCCCGATAAGTGCTACATaGTGTTGGGTTGGACTCAAC | + |
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Preference number: 2 (lower is better) Translates to: ISVQFNWAGKVRGKGIVLPISAT*CWVGLN Trigger: GTTGAGTCCAACCCAACATCATGTAGCACTTATCGG...GAGGACGATCCCTTTGCCTCTGACTTTTCCTGCCCAATTAAACTGCACAGAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178253.8 |
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| 3UTR-3UTR CCA 90 bp | GAGACTCTGCAACTTCAGCATCTTCTTGGGTACAGAGCAGGGGAGGAGATGCTGTACATGATGTTGGGTTaGACTCAACAAGACTTGATG | + |
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Preference number: 2 (lower is better) Translates to: ETLQLQHLLGYRAGEEMLYMMLG*TQQDLM Trigger: CATCAAGTCTTGTTGAGTCCAACCCAACATCATGTA...CAGCATCTCCTCCCCTGCTCTGTACCCAAGAAGATGCTGAAGTTGCAGAGTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178253.8 |
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| 3UTR-3UTR TCA 90 bp | AAGTCAAACGCCACTGCAGTCTCTCCTAGAGACGCTGTATATGCTCTTCCTTTATCCTTCCCCCACCTCTaGGGTAATTCTAATGCCATA | + |
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Preference number: 2 (lower is better) Translates to: KSNATAVSPRDAVYALPLSFPHL*GNSNAI Trigger: TATGGCATTAGAATTACCTCAGAGGTGGGGGAAGGA...TAAAGGAAGAGCATATACAGCGTCTCTAGGAGAGACTGCAGTGGCGTTTGACTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178253.8 |
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| 3UTR-3UTR GCA 90 bp | TTTCGGATGTCATTGATTTGCTTCACCATTTCCCTTATGTGTTCACCCCTGTTTTCTTCAGCTGCAGGATaGATAGGCAGTGGGCCCAAC | + |
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Preference number: 2 (lower is better) Translates to: FRMSLICFTISLMCSPLFSSAAG*IGSGPN Trigger: GTTGGGCCCACTGCCTATGCATCCTGCAGCTGAAGA...AAACAGGGGTGAACACATAAGGGAAATGGTGAAGCAAATCAATGACATCCGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178253.8 |
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| 3UTR-3UTR CCA 90 bp | ATTTCGGATGTCATTGATTTGCTTCACCATTTCCCTTATGTGTTCACCCCTGTTAGGATGCATAGGCAGTaGGCCCAACAGCTTCCCAAT | + |
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Preference number: 2 (lower is better) Translates to: ISDVIDLLHHFPYVFTPVRMHRQ*AQQLPN Trigger: ATTGGGAAGCTGTTGGGCCCACTGCCTATGCATCCT...AACAGGGGTGAACACATAAGGGAAATGGTGAAGCAAATCAATGACATCCGAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178253.8 |
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| 3UTR-3UTR TCA 90 bp | ATGAAGTCAGCCCTGGGATCCCAGGACTTTTCTAACGTTTGGTCATCTTCTTCTGGACTCAACAAGACTTaGTGGATTTCAAACAAGGGT | + |
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Preference number: 2 (lower is better) Translates to: MKSALGSQDFSNVWSSSSGLNKT*WISNKG Trigger: ACCCTTGTTTGAAATCCATCAAGTCTTGTTGAGTCC...AGAAGAAGATGACCAAACGTTAGAAAAGTCCTGGGATCCCAGGGCTGACTTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178253.8 |
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| 3UTR-3UTR GCA 90 bp | CCTTTCCTCTCGACAGTAATTGAGATCTTCGAGTTGTTTCCTCTTTTGGTCACATACGGAGCTTGTGCATaGTCTAGGTTTATGTCAGGT | + |
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Preference number: 2 (lower is better) Translates to: PFLSTVIEIFELFPLLVTYGACA*SRFMSG Trigger: ACCTGACATAAACCTAGAGCATGCACAAGCTCCGTA...TGTGACCAAAAGAGGAAACAACTCGAAGATCTCAATTACTGTCGAGAGGAAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178253.8 |
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| 3UTR-3UTR GCA 90 bp | ATGAAGTCAGCCCTGGGATCCCAGGACTTTTCTAACGTTTGGTCATCTTCTTCTTTTACTTCCGATAAGTaGTACATGATGTTGGGTTGG | + |
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Preference number: 2 (lower is better) Translates to: MKSALGSQDFSNVWSSSSFTSDK*YMMLGW Trigger: CCAACCCAACATCATGTAGCACTTATCGGAAGTAAA...AGAAGAAGATGACCAAACGTTAGAAAAGTCCTGGGATCCCAGGGCTGACTTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178253.8 |
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| 3UTR-3UTR GCA 90 bp | ATTTCGGATGTCATTGATTTGCTTCACCATTTCCCTTATGTGTTCACCCCTGTTTCCTTGGCCAGGTCCTaGTTGAGAATGTACTGTTCT | + |
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Preference number: 2 (lower is better) Translates to: ISDVIDLLHHFPYVFTPVSLARS*LRMYCS Trigger: AGAACAGTACATTCTCAAGCAGGACCTGGCCAAGGA...AACAGGGGTGAACACATAAGGGAAATGGTGAAGCAAATCAATGACATCCGAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178253.8 |
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| 3UTR-3UTR GCA 90 bp | ATTTCGGATGTCATTGATTTGCTTCACCATTTCCCTTATGTGTTCACCCCTGTTTCCACAAAGCATTTCTaGTCAGCAGTGAGTTCTTGT | + |
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Preference number: 2 (lower is better) Translates to: ISDVIDLLHHFPYVFTPVSTKHF*SAVSSC Trigger: ACAAGAACTCACTGCTGAGCAGAAATGCTTTGTGGA...AACAGGGGTGAACACATAAGGGAAATGGTGAAGCAAATCAATGACATCCGAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178253.8 |
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| 3UTR TCA 72 bp | TGTTCTCGGAACACCTGGGTGGCTCTGCTGATAAGCTaGAGACACTCCTCGGGAGGGGGAGCCAAATCCTTT | + |
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Preference number: 3 (lower is better) Translates to: CSRNTWVALLIS*RHSSGGGAKSF Trigger: AAAGGATTTGGCTCCCCCTCCCGAGGAGTGTCTTCAGCTTATCAGCAGAGCCACCCAGGTGTTCCGAGAACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178253.8 |
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| 3UTR CCA 72 bp | ACTGGTGATGCAGATCATTGTGGGCCCCAGGATGTCTaGGACGATCCAGAATCCTCGAATTGGAGCTGGCTG | + |
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Preference number: 3 (lower is better) Translates to: TGDADHCGPQDV*DDPESSNWSWL Trigger: CAGCCAGCTCCAATTCGAGGATTCTGGATCGTCCCAGACATCCTGGGGCCCACAATGATCTGCATCACCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178253.8 |
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| 3UTR CCA 72 bp | ACCGTAGTTATCTTCAGCTGCAGGATGCATAGGCAGTaGGCCCAACAGCTTCCCAATATTCCCTGGGCTGTG | + |
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Preference number: 3 (lower is better) Translates to: TVVIFSCRMHRQ*AQQLPNIPWAV Trigger: CACAGCCCAGGGAATATTGGGAAGCTGTTGGGCCCACTGCCTATGCATCCTGCAGCTGAAGATAACTACGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178253.8 |
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| 3UTR TCA 72 bp | CCTCGGGAGGGGGAGCCAAATCCTTTTCAGATGATTTaGGAAATGCTGGGTTGGCAGCACTACGCTGCAAGA | + |
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Preference number: 3 (lower is better) Translates to: PREGEPNPFQMI*EMLGWQHYAAR Trigger: TCTTGCAGCGTAGTGCTGCCAACCCAGCATTTCTCAAATCATCTGAAAAGGATTTGGCTCCCCCTCCCGAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178253.8 |
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| 3UTR TCA 72 bp | ACACTCCTCGGGAGGGGGAGCCAAATCCTTTTCAGATaGTTTGAGAAATGCTGGGTTGGCAGCACTACGCTG | + |
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Preference number: 3 (lower is better) Translates to: TLLGRGSQILFR*FEKCWVGSTTL Trigger: CAGCGTAGTGCTGCCAACCCAGCATTTCTCAAATCATCTGAAAAGGATTTGGCTCCCCCTCCCGAGGAGTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178253.8 |
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| 3UTR GCA 72 bp | TATAGCACAGGCATCGTAACCGTAGTTATCTTCAGCTaGAGGATGCATAGGCAGTGGGCCCAACAGCTTCCC | + |
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Preference number: 3 (lower is better) Translates to: YSTGIVTVVIFS*RMHRQWAQQLP Trigger: GGGAAGCTGTTGGGCCCACTGCCTATGCATCCTGCAGCTGAAGATAACTACGGTTACGATGCCTGTGCTATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178253.8 |
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| 3UTR-3UTR CAA 90 bp | AACACACTCAAACACGTACAGAGAAGGGATGAAGTCAGCCCTGGGATCCCAGGAGATCCAGCATCTCACTaGGATACCATGCAGCATGCT | + |
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Preference number: 3 (lower is better) Translates to: NTLKHVQRRDEVSPGIPGDPASH*DTMQHA Trigger: AGCATGCTGCATGGTATCCAAGTGAGATGCTGGATC...TCCTGGGATCCCAGGGCTGACTTCATCCCTTCTCTGTACGTGTTTGAGTGTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178253.8 |
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| 3UTR GCA 72 bp | CACTATGTGGGGATCCAGCATCTCACTTGGATACCATaGAGCATGCTTCAGAGTCAGAGAGGTAGAGCTGGT | + |
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Preference number: 3 (lower is better) Translates to: HYVGIQHLTWIP*SMLQSQRGRAG Trigger: ACCAGCTCTACCTCTCTGACTCTGAAGCATGCTGCATGGTATCCAAGTGAGATGCTGGATCCCCACATAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178253.8 |
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| 3UTR GCA 72 bp | AGATCTCTGTTAATGAGGTCAGCCTGCTCTACAGAGTaGGTTCCAGAACAACCAGGGCTGTTAACCCTGTCT | + |
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Preference number: 3 (lower is better) Translates to: RSLLMRSACSTE*VPEQPGLLTLS Trigger: AGACAGGGTTAACAGCCCTGGTTGTTCTGGAACGCACTCTGTAGAGCAGGCTGACCTCATTAACAGAGATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178253.8 |
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| 3UTR CCA 72 bp | CTCAAAGGAGTCTGGAGTTTCAGCCAGAATGCGCAGTaGAGACTCTGCAACTTCAGCATCTTCTTGGGTACA | + |
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Preference number: 3 (lower is better) Translates to: LKGVWSFSQNAQ*RLCNFSIFLGT Trigger: TGTACCCAAGAAGATGCTGAAGTTGCAGAGTCTCCACTGCGCATTCTGGCTGAAACTCCAGACTCCTTTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178253.8 |
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| 3UTR CCA 72 bp | TCTTCTTGGGTACAGAGCAGGGGAGGAGATGCTGGGTaGACTGTACTTAATAAAGGCCGTATGAGACATTCA | + |
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Preference number: 3 (lower is better) Translates to: SSWVQSRGGDAG*TVLNKGRMRHS Trigger: TGAATGTCTCATACGGCCTTTATTAAGTACAGTCCACCCAGCATCTCCTCCCCTGCTCTGTACCCAAGAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178253.8 |
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| 3UTR-3UTR CAA 90 bp | CAGCACTATGTGGGGATCCAGCATCTCACTTGGATACCATGCAGCATGCTTCAGCTACATGATGTTGGGTaGGACTCAACAAGACTTGAT | + |
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Preference number: 3 (lower is better) Translates to: QHYVGIQHLTWIPCSMLQLHDVG*DSTRLD Trigger: ATCAAGTCTTGTTGAGTCCAACCCAACATCATGTAG...CTGAAGCATGCTGCATGGTATCCAAGTGAGATGCTGGATCCCCACATAGTGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178253.8 |
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| 3UTR-3UTR CAA 90 bp | TGCAACTTCAGCATCTTCTTGGGTACAGAGCAGGGGAGGAGATGCTGGGTGGACTGCTACAATTCACAGTaGCTTTTCCACCTTCAAATT | + |
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Preference number: 3 (lower is better) Translates to: CNFSIFLGTEQGRRCWVDCYNSQ*LFHLQI Trigger: AATTTGAAGGTGGAAAAGCAACTGTGAATTGTAGCA...GTCCACCCAGCATCTCCTCCCCTGCTCTGTACCCAAGAAGATGCTGAAGTTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178253.8 |
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| 3UTR-3UTR CAA 90 bp | CAGCACTATGTGGGGATCCAGCATCTCACTTGGATACCATGCAGCATGCTTCAGGGCCTAGCCTCTGTTTaGGTGTTTATAAATGACTTA | + |
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Preference number: 3 (lower is better) Translates to: QHYVGIQHLTWIPCSMLQGLASV*VFINDL Trigger: TAAGTCATTTATAAACACCAAAACAGAGGCTAGGCC...CTGAAGCATGCTGCATGGTATCCAAGTGAGATGCTGGATCCCCACATAGTGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178253.8 |
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| 3UTR-3UTR CAA 90 bp | ATCTCTGTGCAGTTTAATTGGGCAGGAAAAGTCAGAGGCAAAGGGATCGTCCTCGTTCAAATATATTCTTaGAGACGGTTACCAGGGGCC | + |
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Preference number: 3 (lower is better) Translates to: ISVQFNWAGKVRGKGIVLVQIYS*RRLPGA Trigger: GGCCCCTGGTAACCGTCTCAAAGAATATATTTGAAC...GAGGACGATCCCTTTGCCTCTGACTTTTCCTGCCCAATTAAACTGCACAGAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178253.8 |
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| 3UTR-3UTR CAA 90 bp | GACATGATTTCGGATGTCATTGATTTGCTTCACCATTTCCCTTATGTGTTCACCTCCAGAATCCTCGAATaGGAGCTGGCTGCACGGCAA | + |
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Preference number: 3 (lower is better) Translates to: DMISDVIDLLHHFPYVFTSRILE*ELAARQ Trigger: TTGCCGTGCAGCCAGCTCCAATTCGAGGATTCTGGA...GGTGAACACATAAGGGAAATGGTGAAGCAAATCAATGACATCCGAAATCATGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178253.8 |
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| 3UTR TCA 72 bp | GGGCTCACGGAGAGAATAAATTCTTATCACGTTGTCTaGTGTCAACAGCACTATGTGGGGATCCAGCATCTC | + |
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Preference number: 3 (lower is better) Translates to: GLTERINSYHVV*CQQHYVGIQHL Trigger: GAGATGCTGGATCCCCACATAGTGCTGTTGACATCAGACAACGTGATAAGAATTTATTCTCTCCGTGAGCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178253.8 |
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| 3UTR TCA 72 bp | CACCACATCTCTGTCTTTCTGTTCAAATATATTCTTTaGGACGGTTACCAGGGGCCCGAAGTCAAACGCCAC | + |
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Preference number: 3 (lower is better) Translates to: HHISVFLFKYIL*DGYQGPEVKRH Trigger: GTGGCGTTTGACTTCGGGCCCCTGGTAACCGTCTCAAAGAATATATTTGAACAGAAAGACAGAGATGTGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178253.8 |
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| 3UTR TCA 72 bp | CACCCCTGTTTGATGGCGTTGCCTAGATGTCGCAGTTaGTCAGGTATCAGCTGTAACTCTTTCTTCATGTCT | + |
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Preference number: 3 (lower is better) Translates to: HPCLMALPRCRS*SGISCNSFFMS Trigger: AGACATGAAGAAAGAGTTACAGCTGATACCTGATCAACTGCGACATCTAGGCAACGCCATCAAACAGGGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178253.8 |
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| 3UTR GCA 72 bp | ACCGAAGCAAATCACAGATATTACGGAGCTTGTGCATaGTCTAGGTTTATGTCAGGTGCTGGACACACACAC | + |
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Preference number: 3 (lower is better) Translates to: TEANHRYYGACA*SRFMSGAGHTH Trigger: GTGTGTGTGTCCAGCACCTGACATAAACCTAGAGCATGCACAAGCTCCGTAATATCTGTGATTTGCTTCGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178253.8 |
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| 3UTR-3UTR CAA 90 bp | AGATCTCTGTTAATGAGGTCAGCCTGCTCTACAGAGTGCGTTCCAGAACAACCAAACAGTGCTCCCTGTTaGTTTTACAGCCTTCAAGTT | + |
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Preference number: 3 (lower is better) Translates to: RSLLMRSACSTECVPEQPNSAPC*FYSLQV Trigger: AACTTGAAGGCTGTAAAACAAACAGGGAGCACTGTT...TGGTTGTTCTGGAACGCACTCTGTAGAGCAGGCTGACCTCATTAACAGAGATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178253.8 |
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| 3UTR-3UTR CAA 90 bp | ATTTCGGATGTCATTGATTTGCTTCACCATTTCCCTTATGTGTTCACCCCTGTTAACTTCAGCATCTTCTaGGGTACAGAGCAGGGGAGG | + |
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Preference number: 3 (lower is better) Translates to: ISDVIDLLHHFPYVFTPVNFSIF*GTEQGR Trigger: CCTCCCCTGCTCTGTACCCAAGAAGATGCTGAAGTT...AACAGGGGTGAACACATAAGGGAAATGGTGAAGCAAATCAATGACATCCGAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178253.8 |
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| 3UTR GCA 72 bp | GGGTTGGCAGCACTACGCTGCAAGATTCTTTTAATATaGTTCTCAAAGGAGTCTGGAGTTTCAGCCAGAATG | + |
|
Preference number: 3 (lower is better) Translates to: GLAALRCKILLI*FSKESGVSARM Trigger: CATTCTGGCTGAAACTCCAGACTCCTTTGAGAAGCATATTAAAAGAATCTTGCAGCGTAGTGCTGCCAACCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178253.8 |
||
| 3UTR CCA 72 bp | ATTCTTATCACGTTGTCTGATGTCAACAGCACTATGTaGGGATCCAGCATCTCACTTGGATACCATGCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: ILITLSDVNSTM*GSSISLGYHAA Trigger: TGCTGCATGGTATCCAAGTGAGATGCTGGATCCCCACATAGTGCTGTTGACATCAGACAACGTGATAAGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178253.8 |
||
| 3UTR CCA 72 bp | AAGGAAGGTCTCCCCATTCTCATACAGGATGTACAGTaGATACGCCACCACATCTCTGTCTTTCTGTTCAAA | + |
|
Preference number: 3 (lower is better) Translates to: KEGLPILIQDVQ*IRHHISVFLFK Trigger: TTTGAACAGAAAGACAGAGATGTGGTGGCGTATCCACTGTACATCCTGTATGAGAATGGGGAGACCTTCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178253.8 |
||
| 3UTR CCA 72 bp | CTGCAAGATTCTTTTAATATGCTTCTCAAAGGAGTCTaGAGTTTCAGCCAGAATGCGCAGTGGAGACTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: LQDSFNMLLKGV*SFSQNAQWRLC Trigger: GCAGAGTCTCCACTGCGCATTCTGGCTGAAACTCCAGACTCCTTTGAGAAGCATATTAAAAGAATCTTGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178253.8 |
||
| 3UTR TCA 72 bp | ACACACAGGCCTAGCCTCTGTTTTGGTGTTTATAAATaGCTTAGACCCGTAATCTCAACACTCAGAGACTGG | + |
|
Preference number: 3 (lower is better) Translates to: THRPSLCFGVYK*LRPVISTLRDW Trigger: CCAGTCTCTGAGTGTTGAGATTACGGGTCTAAGTCATTTATAAACACCAAAACAGAGGCTAGGCCTGTGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178253.8 |
||
| 3UTR-3UTR CAA 90 bp | GATCAGGTATCAGCTGTAACTCTTTCTTCATGTCTCTCTCACTGTCAGAGAGAATCCTTTTCAGATGATTaGAGAAATGCTGGGTTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: DQVSAVTLSSCLSHCQRESFSDD*RNAGLA Trigger: TGCCAACCCAGCATTTCTCAAATCATCTGAAAAGGA...TTCTCTCTGACAGTGAGAGAGACATGAAGAAAGAGTTACAGCTGATACCTGATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178253.8 |
||
| 3UTR TCA 72 bp | TTTCCCGGAGACTTTTCCTTTCCTCTCGACAGTAATTaGGATCTTCGAGTTGTTTCCTCTTTTGGTCACATA | + |
|
Preference number: 3 (lower is better) Translates to: FPGDFSFPLDSN*DLRVVSSFGHI Trigger: TATGTGACCAAAAGAGGAAACAACTCGAAGATCTCAATTACTGTCGAGAGGAAAGGAAAAGTCTCCGGGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178253.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTCGGATGTCATTGATTTGCTTCACCATTTCCCTTATGTGTTCACCCCTGTTTCAATTACTAAGATATTaGGAACACAGGGCAAACAGA | + |
|
Preference number: 3 (lower is better) Translates to: FRMSLICFTISLMCSPLFQLLRY*EHRANR Trigger: TCTGTTTGCCCTGTGTTCCAAATATCTTAGTAATTG...AAACAGGGGTGAACACATAAGGGAAATGGTGAAGCAAATCAATGACATCCGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178253.8 |
||
| 3UTR CAA 72 bp | TCCTCGGGAGGGGGAGCCAAATCCTTTTCAGATGATTaGAGAAATGCTGGGTTGGCAGCACTACGCTGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: SSGGGAKSFSDD*RNAGLAALRCK Trigger: CTTGCAGCGTAGTGCTGCCAACCCAGCATTTCTCAAATCATCTGAAAAGGATTTGGCTCCCCCTCCCGAGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178253.8 |
||
| CDS-3UTR CCA 90 bp | AGATCTCTGTTAATGAGGTCAGCCTGCTCTACAGAGTGCGTTCCAGAACAACCACTTCTCCGCTTCGGCTaGACTCTGGTTTCTTACGCC | + |
|
Preference number: 4 (lower is better) Translates to: RSLLMRSACSTECVPEQPLLRFG*TLVSYA Trigger: GGCGTAAGAAACCAGAGTCCAGCCGAAGCGGAGAAG...TGGTTGTTCTGGAACGCACTCTGTAGAGCAGGCTGACCTCATTAACAGAGATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178253.8 |
||
| CDS-3UTR CCA 90 bp | CCACACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTCCACGCCACCACCGCTaGGGCCTCGAAGGCGAACCA | + |
|
Preference number: 4 (lower is better) Translates to: PHQILSKMLLYKLNSAPCPRHHR*GLEGEP Trigger: TGGTTCGCCTTCGAGGCCCCAGCGGTGGTGGCGTGG...ACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| CDS-3UTR CCA 90 bp | CACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTTTGCCACGCCACCACCGCTaGGGCCTCGAAGGCGAACCA | + |
|
Preference number: 4 (lower is better) Translates to: HQILSKMLLYKLNSAPCLPRHHR*GLEGEP Trigger: TGGTTCGCCTTCGAGGCCCCAGCGGTGGTGGCGTGG...CAAACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| CDS-3UTR TCA 90 bp | ATGAAGTCAGCCCTGGGATCCCAGGACTTTTCTAACGTTTGGTCATCTTCTTCTGATTCCAGACCAGATTaGGCTACAAAGCGGGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: MKSALGSQDFSNVWSSSSDSRPD*ATKRGH Trigger: ATGACCCCGCTTTGTAGCTCAATCTGGTCTGGAATC...AGAAGAAGATGACCAAACGTTAGAAAAGTCCTGGGATCCCAGGGCTGACTTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178253.8 |
||
| CDS-3UTR GCA 90 bp | CCACACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTGTCAGCCCCACACTGTaGACGCCAGCTTCATGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PHQILSKMLLYKLNSAPCVSPTL*TPASWL Trigger: CAGCCATGAAGCTGGCGTGCACAGTGTGGGGCTGAC...ACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| 3UTR CAA 72 bp | ATCTCTCAGCAATCGGGATGGTGCTACAATTCACAGTaGCTTTTCCACCTTCAAATTCAGAGTCCTTCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: ISQQSGWCYNSQ*LFHLQIQSPSP Trigger: GGGGGAAGGACTCTGAATTTGAAGGTGGAAAAGCAACTGTGAATTGTAGCACCATCCCGATTGCTGAGAGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178253.8 |
||
| 3UTR CAA 72 bp | AATCCTCGAATTGGAGCTGGCTGCACGGCAATGGCTTaGTACAAAGAATGTGCTCCACAAAGCATTTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: NPRIGAGCTAMA*YKECAPQSISA Trigger: AGCAGAAATGCTTTGTGGAGCACATTCTTTGTACAAAGCCATTGCCGTGCAGCCAGCTCCAATTCGAGGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178253.8 |
||
| CDS-3UTR GCA 90 bp | CACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTTTGTTAGGAAGCCAGCTCTaGCACAGCTCCCCATCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: HQILSKMLLYKLNSAPCLLGSQL*HSSPSP Trigger: GGGCGATGGGGAGCTGTGGCAGAGCTGGCTTCCTAA...CAAACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| CDS-3UTR GCA 90 bp | CACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTTTGGTCAGCCCCACACTGTaGACGCCAGCTTCATGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: HQILSKMLLYKLNSAPCLVSPTL*TPASWL Trigger: CAGCCATGAAGCTGGCGTGCACAGTGTGGGGCTGAC...CAAACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| CDS-3UTR CCA 90 bp | CCACACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTTCCTCGAATTGGAGCTaGCTGCCTGCACGGCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: PHQILSKMLLYKLNSAPCSSNWS*LPARQW Trigger: CCATTGCCGTGCAGGCAGCCAGCTCCAATTCGAGGA...ACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| CDS-3UTR CCA 90 bp | CCACACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTCCAGAATCCTCGAATTaGAGCTGGCTGCCTGCACGG | + |
|
Preference number: 4 (lower is better) Translates to: PHQILSKMLLYKLNSAPCPESSN*SWLPAR Trigger: CCGTGCAGGCAGCCAGCTCCAATTCGAGGATTCTGG...ACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| CDS-3UTR GCA 90 bp | CCACACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTTCTTCAGCTGCAGGATaGATAGGCAGTGGGCCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: PHQILSKMLLYKLNSAPCSSAAG*IGSGPN Trigger: GTTGGGCCCACTGCCTATGCATCCTGCAGCTGAAGA...ACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| CDS-3UTR GCA 90 bp | CCACACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTATCGTCCTCTCCAGATaGCAGCTTCAGGGCAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PHQILSKMLLYKLNSAPCIVLSR*QLQGKL Trigger: GAGCTTGCCCTGAAGCTGGCATCTGGAGAGGACGAT...ACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| CDS-3UTR GCA 90 bp | CCACACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTCGCCAGCTTCATGGCTaGAGTGGTATCTCGAAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: PHQILSKMLLYKLNSAPCRQLHG*SGISKD Trigger: GTCCTTCGAGATACCACTGCAGCCATGAAGCTGGCG...ACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| CDS-3UTR CCA 90 bp | CCACACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTCGCAAGAACACGACGTaGTTAGGAAGCCAGCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PHQILSKMLLYKLNSAPCRKNTT*LGSQLC Trigger: GCAGAGCTGGCTTCCTAACCACGTCGTGTTCTTGCG...ACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| CDS-3UTR CCA 90 bp | CACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTTTGTCCTCGAATTGGAGCTaGCTGCCTGCACGGCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: HQILSKMLLYKLNSAPCLSSNWS*LPARQW Trigger: CCATTGCCGTGCAGGCAGCCAGCTCCAATTCGAGGA...CAAACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| CDS-3UTR CCA 90 bp | CACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTTTGCCAGAATCCTCGAATTaGAGCTGGCTGCCTGCACGG | + |
|
Preference number: 4 (lower is better) Translates to: HQILSKMLLYKLNSAPCLPESSN*SWLPAR Trigger: CCGTGCAGGCAGCCAGCTCCAATTCGAGGATTCTGG...CAAACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| CDS-3UTR GCA 90 bp | CACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTTTGATCGTCCTCTCCAGATaGCAGCTTCAGGGCAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: HQILSKMLLYKLNSAPCLIVLSR*QLQGKL Trigger: GAGCTTGCCCTGAAGCTGGCATCTGGAGAGGACGAT...CAAACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| CDS-3UTR GCA 90 bp | CACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTTTGCGCCAGCTTCATGGCTaGAGTGGTATCTCGAAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: HQILSKMLLYKLNSAPCLRQLHG*SGISKD Trigger: GTCCTTCGAGATACCACTGCAGCCATGAAGCTGGCG...CAAACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| CDS-3UTR CCA 90 bp | CACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTTTGCTTCTCCGCTTCGGCTaGACTCTGGTTTCTTACGCC | + |
|
Preference number: 4 (lower is better) Translates to: HQILSKMLLYKLNSAPCLLLRFG*TLVSYA Trigger: GGCGTAAGAAACCAGAGTCCAGCCGAAGCGGAGAAG...CAAACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| 3UTR CAA 72 bp | GTGTCAGAAGGTGACATGATTTCGGATGTCATTGATTaGCTTCACCATTTCCCTTATGTGTTCACCCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: VSEGDMISDVID*LHHFPYVFTPV Trigger: AACAGGGGTGAACACATAAGGGAAATGGTGAAGCAAATCAATGACATCCGAAATCATGTCACCTTCTGACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178253.8 |
||
| CDS-3UTR TCA 90 bp | CCACACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTATGCAGAGTAATCTCTaGTACTGGGAGAGAGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PHQILSKMLLYKLNSAPCMQSNL*YWERGG Trigger: GCCTCCTCTCTCCCAGTATCAGAGATTACTCTGCAT...ACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| CDS-3UTR GCA 90 bp | CCACACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTGCGCAGTGGAGACTCTaGAACTTCAGCATCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PHQILSKMLLYKLNSAPCAQWRL*NFSIFL Trigger: CAAGAAGATGCTGAAGTTGCAGAGTCTCCACTGCGC...ACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| CDS-3UTR GCA 90 bp | CCACACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTTCAGGATGGACTGAATaGACTTTCGCTGGTAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: PHQILSKMLLYKLNSAPCSGWTE*TFAGRH Trigger: GTGCCTACCAGCGAAAGTGCATTCAGTCCATCCTGA...ACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| CDS-3UTR CCA 90 bp | CACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTTTGAGGATGCATAGGCAGTaGGCCCAACAGCTTCCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: HQILSKMLLYKLNSAPCLRMHRQ*AQQLPN Trigger: ATTGGGAAGCTGTTGGGCCCACTGCCTATGCATCCT...CAAACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| CDS-3UTR CCA 90 bp | CCACACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTACTTCAGCATCTTCTTaGGTACAGAGCAGGGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PHQILSKMLLYKLNSAPCTSASS*VQSRGG Trigger: TCCTCCCCTGCTCTGTACCCAAGAAGATGCTGAAGT...ACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| CDS-3UTR TCA 90 bp | CACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTTTGATGCAGAGTAATCTCTaGTACTGGGAGAGAGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: HQILSKMLLYKLNSAPCLMQSNL*YWERGG Trigger: GCCTCCTCTCTCCCAGTATCAGAGATTACTCTGCAT...CAAACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| CDS-3UTR TCA 90 bp | CCACACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTATTCATAGGTACTGGTaGTGCAGATCATTGTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PHQILSKMLLYKLNSAPCIHRYW*CRSLWA Trigger: GGCCCACAATGATCTGCATCACCAGTACCTATGAAT...ACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTGTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| CDS-3UTR TCA 90 bp | CCACACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTCCTAGATGTCGCAGTTaGTCAGGTATCAGCTGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: PHQILSKMLLYKLNSAPCPRCRS*SGISCN Trigger: GTTACAGCTGATACCTGATCAACTGCGACATCTAGG...ACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTGTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| CDS-3UTR GCA 90 bp | CCACACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTCTCACTTGGATACCATaGAGCATGCTTCAGAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: PHQILSKMLLYKLNSAPCLTWIP*SMLQSQ Trigger: CTGACTCTGAAGCATGCTGCATGGTATCCAAGTGAG...ACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTGTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| CDS-3UTR GCA 90 bp | CCACACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTGTAGTTATCTTCAGCTaGAGGATGCATAGGCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PHQILSKMLLYKLNSAPCVVIFS*RMHRQW Trigger: CCACTGCCTATGCATCCTGCAGCTGAAGATAACTAC...ACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTGTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| CDS-3UTR GCA 90 bp | CACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTTTGGCGCAGTGGAGACTCTaGAACTTCAGCATCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: HQILSKMLLYKLNSAPCLAQWRL*NFSIFL Trigger: CAAGAAGATGCTGAAGTTGCAGAGTCTCCACTGCGC...CAAACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| CDS-3UTR GCA 90 bp | CACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTTTGGAGTTTCAGCCAGAATaGGCAGTGGAGACTCTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: HQILSKMLLYKLNSAPCLEFQPE*AVETLQ Trigger: TTGCAGAGTCTCCACTGCGCATTCTGGCTGAAACTC...CAAACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| CDS-3UTR GCA 90 bp | CCACACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTTCCTTGGCCAGGTCCTaGTTGAGAATGTACTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PHQILSKMLLYKLNSAPCSLARS*LRMYCS Trigger: AGAACAGTACATTCTCAAGCAGGACCTGGCCAAGGA...ACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTGTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| CDS-3UTR GCA 90 bp | CACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTTTGTCAGGATGGACTGAATaGACTTTCGCTGGTAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: HQILSKMLLYKLNSAPCLSGWTE*TFAGRH Trigger: GTGCCTACCAGCGAAAGTGCATTCAGTCCATCCTGA...CAAACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| CDS-3UTR CCA 90 bp | CACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTTTGGCTTCATGGCTGCAGTaGTATCTCGAAGGACACTTG | + |
|
Preference number: 4 (lower is better) Translates to: HQILSKMLLYKLNSAPCLASWLQ*YLEGHL Trigger: CAAGTGTCCTTCGAGATACCACTGCAGCCATGAAGC...CAAACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| CDS-3UTR CCA 90 bp | CACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTTTGACTTCAGCATCTTCTTaGGTACAGAGCAGGGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: HQILSKMLLYKLNSAPCLTSASS*VQSRGG Trigger: TCCTCCCCTGCTCTGTACCCAAGAAGATGCTGAAGT...CAAACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| CDS-3UTR CCA 90 bp | CCACACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTCTTCTCAAAGGAGTCTaGAGTTTCAGCCAGAATGCG | + |
|
Preference number: 4 (lower is better) Translates to: PHQILSKMLLYKLNSAPCLLKGV*SFSQNA Trigger: CGCATTCTGGCTGAAACTCCAGACTCCTTTGAGAAG...ACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTGTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| CDS-3UTR CCA 90 bp | CCACACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTGTTTTTGAGAAATGCTaGGTTGGCAGCACTACGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PHQILSKMLLYKLNSAPCVFEKC*VGSTTL Trigger: CAGCGTAGTGCTGCCAACCCAGCATTTCTCAAAAAC...ACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTGTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035283.11 ENSMUST00000108531.8 |
||
| CDS-3UTR TCA 90 bp | CACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTTTGCCGATAAGTGCTACATaGTGTTGGGTTGGACTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: HQILSKMLLYKLNSAPCLPISAT*CWVGLN Trigger: GTTGAGTCCAACCCAACATCATGTAGCACTTATCGG...CAAACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| CDS-3UTR TCA 90 bp | CACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTTTGTCCTTCCCCCACCTCTaGGGTAATTCTAATGCCATA | + |
|
Preference number: 4 (lower is better) Translates to: HQILSKMLLYKLNSAPCLSFPHL*GNSNAI Trigger: TATGGCATTAGAATTACCTCAGAGGTGGGGGAAGGA...CAAACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| CDS-3UTR TCA 90 bp | CACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTTTGATTCATAGGTACTGGTaGTGCAGATCATTGTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: HQILSKMLLYKLNSAPCLIHRYW*CRSLWA Trigger: GGCCCACAATGATCTGCATCACCAGTACCTATGAAT...CAAACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| CDS-3UTR TCA 90 bp | CACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTTTGCCCGGAGACTTTTCCTaGAGAGATGAGAAACCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: HQILSKMLLYKLNSAPCLPGDFS*RDEKPF Trigger: AAAGGGTTTCTCATCTCTTCAGGAAAAGTCTCCGGG...CAAACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035283.11 |
||
| CDS-3UTR TCA 90 bp | CACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTTTGCCTAGATGTCGCAGTTaGTCAGGTATCAGCTGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: HQILSKMLLYKLNSAPCLPRCRS*SGISCN Trigger: GTTACAGCTGATACCTGATCAACTGCGACATCTAGG...CAAACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| CDS-3UTR TCA 90 bp | CCACACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTCCTTTTCAGATGATTTaGGAAATGCTGGGTTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PHQILSKMLLYKLNSAPCPFQMI*EMLGWQ Trigger: CTGCCAACCCAGCATTTCTCAAATCATCTGAAAAGG...ACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTGTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108530.2 |
||
| CDS-3UTR GCA 90 bp | CACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTTTGGTAGTTATCTTCAGCTaGAGGATGCATAGGCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: HQILSKMLLYKLNSAPCLVVIFS*RMHRQW Trigger: CCACTGCCTATGCATCCTGCAGCTGAAGATAACTAC...CAAACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| CDS-3UTR GCA 90 bp | CACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTTTGTCCTTGGCCAGGTCCTaGTTGAGAATGTACTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: HQILSKMLLYKLNSAPCLSLARS*LRMYCS Trigger: AGAACAGTACATTCTCAAGCAGGACCTGGCCAAGGA...CAAACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| CDS-3UTR CCA 90 bp | CCACACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTTCTGTGCAGTTTAATTaGGCAGGAAAAGTCAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PHQILSKMLLYKLNSAPCSVQFN*AGKVRG Trigger: GCCTCTGACTTTTCCTGCCCAATTAAACTGCACAGA...ACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTGTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| CDS-3UTR CCA 90 bp | CACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTTTGCTGCCTGCACGGCAATaGCTTTGTACAAAGAATGTG | + |
|
Preference number: 4 (lower is better) Translates to: HQILSKMLLYKLNSAPCLLPARQ*LCTKNV Trigger: CACATTCTTTGTACAAAGCCATTGCCGTGCAGGCAG...CAAACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| CDS-3UTR CCA 90 bp | CACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTTTGCTTCTCAAAGGAGTCTaGAGTTTCAGCCAGAATGCG | + |
|
Preference number: 4 (lower is better) Translates to: HQILSKMLLYKLNSAPCLLLKGV*SFSQNA Trigger: CGCATTCTGGCTGAAACTCCAGACTCCTTTGAGAAG...CAAACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| CDS-3UTR CCA 90 bp | CACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTTTGGTTTTTGAGAAATGCTaGGTTGGCAGCACTACGCTG | + |
|
Preference number: 4 (lower is better) Translates to: HQILSKMLLYKLNSAPCLVFEKC*VGSTTL Trigger: CAGCGTAGTGCTGCCAACCCAGCATTTCTCAAAAAC...CAAACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035283.11 ENSMUST00000108531.8 |
||
| CDS-3UTR CCA 90 bp | CCACACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTCCTCTTCTTTCAGGATaGACTGAATGCACTTTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: PHQILSKMLLYKLNSAPCPLLSG*TECTFA Trigger: AGCGAAAGTGCATTCAGTCCATCCTGAAAGAAGAGG...ACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTGTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| CDS-3UTR TCA 90 bp | CCACACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTGGACTCAACAAGACTTaGTGGATTTCAAACAAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: PHQILSKMLLYKLNSAPCGLNKT*WISNKG Trigger: ACCCTTGTTTGAAATCCATCAAGTCTTGTTGAGTCC...ACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTGTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| CDS-3UTR TCA 90 bp | CACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTTTGTTGCAGAACAGTTTTTaGGAAATGCTGGGTTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: HQILSKMLLYKLNSAPCLLQNSF*EMLGWQ Trigger: CTGCCAACCCAGCATTTCTCAAAAACTGTTCTGCAA...CAAACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035283.11 ENSMUST00000108531.8 |
||
| CDS-3UTR TCA 90 bp | CACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTTTGCTTTTCCTGAAGAGATaGGAAACCCTTTCCTCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: HQILSKMLLYKLNSAPCLLFLKR*ETLSSR Trigger: TCGAGAGGAAAGGGTTTCTCATCTCTTCAGGAAAAG...CAAACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035283.11 |
||
| CDS-3UTR TCA 90 bp | CCACACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTGATTTCGGATGTCATTaGTTTGCTTCACCATTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: PHQILSKMLLYKLNSAPCDFGCH*FASPFP Trigger: GGGAAATGGTGAAGCAAATCAATGACATCCGAAATC...ACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTGTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| CDS-3UTR GCA 90 bp | CCACACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTTCCACAAAGCATTTCTaGTCAGCAGTGAGTTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PHQILSKMLLYKLNSAPCSTKHF*SAVSSC Trigger: ACAAGAACTCACTGCTGAGCAGAAATGCTTTGTGGA...ACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTGTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| CDS-3UTR GCA 90 bp | CACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTTTGACAGTTTTTGAGAAATaGTGGGTTGGCAGCACTACG | + |
|
Preference number: 4 (lower is better) Translates to: HQILSKMLLYKLNSAPCLTVFEK*WVGSTT Trigger: CGTAGTGCTGCCAACCCAGCATTTCTCAAAAACTGT...CAAACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035283.11 ENSMUST00000108531.8 |
||
| CDS-3UTR CCA 90 bp | CCACACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTTCTAGTACAACACAGTaGTACAGCATTCCTGACTCA | + |
|
Preference number: 4 (lower is better) Translates to: PHQILSKMLLYKLNSAPCSSTTQ*YSIPDS Trigger: TGAGTCAGGAATGCTGTACCACTGTGTTGTACTAGA...ACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTGTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| CDS-3UTR CCA 90 bp | CACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTTTGTCTGTGCAGTTTAATTaGGCAGGAAAAGTCAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: HQILSKMLLYKLNSAPCLSVQFN*AGKVRG Trigger: GCCTCTGACTTTTCCTGCCCAATTAAACTGCACAGA...CAAACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| CDS-3UTR CCA 90 bp | CACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTTTGCCTCTTCTTTCAGGATaGACTGAATGCACTTTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: HQILSKMLLYKLNSAPCLPLLSG*TECTFA Trigger: AGCGAAAGTGCATTCAGTCCATCCTGAAAGAAGAGG...CAAACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| 3UTR CAA 72 bp | CATAAGTCCTTTACTTCCGATAAGTGCTACATGATGTaGGGTTGGACTCAACAAGACTTGATGGATTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: HKSFTSDKCYMM*GWTQQDLMDFK Trigger: TTTGAAATCCATCAAGTCTTGTTGAGTCCAACCCAACATCATGTAGCACTTATCGGAAGTAAAGGACTTATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178253.8 |
||
| CDS-3UTR TCA 90 bp | CACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTTTGGGACTCAACAAGACTTaGTGGATTTCAAACAAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: HQILSKMLLYKLNSAPCLGLNKT*WISNKG Trigger: ACCCTTGTTTGAAATCCATCAAGTCTTGTTGAGTCC...CAAACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| CDS-3UTR TCA 90 bp | CCACACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTTTAATAAAGGCCGTATaGGACATTCATAGGTACTGG | + |
|
Preference number: 4 (lower is better) Translates to: PHQILSKMLLYKLNSAPCLIKAV*DIHRYW Trigger: CCAGTACCTATGAATGTCTCATACGGCCTTTATTAA...ACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTGTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| CDS-3UTR TCA 90 bp | CACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTTTGGATTTCGGATGTCATTaGTTTGCTTCACCATTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: HQILSKMLLYKLNSAPCLDFGCH*FASPFP Trigger: GGGAAATGGTGAAGCAAATCAATGACATCCGAAATC...CAAACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| CDS-3UTR GCA 90 bp | CCACACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTTTTACTTCCGATAAGTaGTACATGATGTTGGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PHQILSKMLLYKLNSAPCFTSDK*YMMLGW Trigger: CCAACCCAACATCATGTAGCACTTATCGGAAGTAAA...ACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTGTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| CDS-3UTR GCA 90 bp | CACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTTTGTCCACAAAGCATTTCTaGTCAGCAGTGAGTTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: HQILSKMLLYKLNSAPCLSTKHF*SAVSSC Trigger: ACAAGAACTCACTGCTGAGCAGAAATGCTTTGTGGA...CAAACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| CDS-3UTR CCA 90 bp | CCACACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTTACATGATGTTGGGTTaGACTCAACAAGACTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: PHQILSKMLLYKLNSAPCYMMLG*TQQDLM Trigger: CATCAAGTCTTGTTGAGTCCAACCCAACATCATGTA...ACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTGTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| CDS-3UTR CCA 90 bp | CACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTTTGTCTAGTACAACACAGTaGTACAGCATTCCTGACTCA | + |
|
Preference number: 4 (lower is better) Translates to: HQILSKMLLYKLNSAPCLSSTTQ*YSIPDS Trigger: TGAGTCAGGAATGCTGTACCACTGTGTTGTACTAGA...CAAACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| CDS-3UTR CCA 90 bp | CCACACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTGACTTTTCTAACGTTTaGTCATCTTCTTCTTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: PHQILSKMLLYKLNSAPCDFSNV*SSSSSP Trigger: GGGAGAAGAAGAAGATGACCAAACGTTAGAAAAGTC...ACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTGTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| CDS-3UTR TCA 90 bp | CACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTTTGATTTCTGCTCAGCAGTaGGTTCTTGTAAACTATCCT | + |
|
Preference number: 4 (lower is better) Translates to: HQILSKMLLYKLNSAPCLISAQQ*VLVNYP Trigger: AGGATAGTTTACAAGAACTCACTGCTGAGCAGAAAT...CAAACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| CDS-3UTR TCA 90 bp | CACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTTTGTTAATAAAGGCCGTATaGGACATTCATAGGTACTGG | + |
|
Preference number: 4 (lower is better) Translates to: HQILSKMLLYKLNSAPCLLIKAV*DIHRYW Trigger: CCAGTACCTATGAATGTCTCATACGGCCTTTATTAA...CAAACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| CDS-3UTR GCA 90 bp | CACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTTTGTTTACTTCCGATAAGTaGTACATGATGTTGGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: HQILSKMLLYKLNSAPCLFTSDK*YMMLGW Trigger: CCAACCCAACATCATGTAGCACTTATCGGAAGTAAA...CAAACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| CDS-3UTR GCA 90 bp | CACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTTTGTTGGCAGCACTACGCTaGAAGATTCTTTTAATATGC | + |
|
Preference number: 4 (lower is better) Translates to: HQILSKMLLYKLNSAPCLLAALR*KILLIC Trigger: GCATATTAAAAGAATCTTGCAGCGTAGTGCTGCCAA...CAAACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| CDS-3UTR CCA 90 bp | CACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTTTGTACATGATGTTGGGTTaGACTCAACAAGACTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: HQILSKMLLYKLNSAPCLYMMLG*TQQDLM Trigger: CATCAAGTCTTGTTGAGTCCAACCCAACATCATGTA...CAAACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| CDS-3UTR TCA 90 bp | CACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTTTGCAAATCCTTTTCAGATaGTTTGAGAAATGCTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: HQILSKMLLYKLNSAPCLQILFR*FEKCWV Trigger: AACCCAGCATTTCTCAAATCATCTGAAAAGGATTTG...CAAACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108530.2 |
||
| 3UTR CAA 72 bp | AAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTTaGTTTTACAGCCTTCAAGTTATGTTCATTCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: KMLLYKLNSAPC*FYSLQVMFIPG Trigger: ACCTGGAATGAACATAACTTGAAGGCTGTAAAACAAACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 ENSMUST00000178253.8 |
||
| CDS CCA 90 bp | GGCGCACCTGATACTGGGAGAGAGGAGGCTCCACGCCACCACCGCTaGGGCCTCGAAGGCGAACCACCAAGAAGGCGCTGCCTTCTGCGT | + |
|
Preference number: 5 (lower is better) Translates to: GAPDTGREEAPRHHR*GLEGEPPRRRCLLR Trigger: ACGCAGAAGGCAGCGCCTTCTTGGTGGTTCGCCTTCGAGGCCCCAGCGGTGGTGGCGTGGAGCCTCCTCTCTCCCAGTATCAGGTGCGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178253.8 |
||
| CDS GCA 90 bp | CGCCACCACCGCTGGGGCCTCGAAGGCGAACCACCAAGAAGGCGCTaGCTTCTGCGTCCCACAGAAACAGTTCCCCTCCGAGGCCGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: RHHRWGLEGEPPRRR*LLRPTETVPLRGRR Trigger: TCTTCGGCCTCGGAGGGGAACTGTTTCTGTGGGACGCAGAAGGCAGCGCCTTCTTGGTGGTTCGCCTTCGAGGCCCCAGCGGTGGTGGCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 ENSMUST00000178253.8 |
||
| CDS TCA 90 bp | CAGGTTTCTCGTCGGCAAATGCGGCGGCAGAGACGGGCACGAGGGTaGAGTCGAAGCCGCTGGCTTCTCCGCTTCGGCTGGACTCTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: QVSRRQMRRQRRARG*SRSRWLLRFGWTLV Trigger: AACCAGAGTCCAGCCGAAGCGGAGAAGCCAGCGGCTTCGACTTCACCCTCGTGCCCGTCTCTGCCGCCGCATTTGCCGACGAGAAACCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 ENSMUST00000178253.8 |
||
| CDS GCA 90 bp | ACCGCTGGGGCCTCGAAGGCGAACCACCAAGAAGGCGCTGCCTTCTaGGTCCCACAGAAACAGTTCCCCTCCGAGGCCGAAGACCAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: TAGASKANHQEGAAF*VPQKQFPSEAEDQV Trigger: AACCTGGTCTTCGGCCTCGGAGGGGAACTGTTTCTGTGGGACGCAGAAGGCAGCGCCTTCTTGGTGGTTCGCCTTCGAGGCCCCAGCGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 ENSMUST00000178253.8 |
||
| CDS TCA 90 bp | CAACGAACCAAAAGGCTGATTGCTTTCACGATGGACCGGCGCACCTaGTACTGGGAGAGAGGAGGCTCCACGCCACCACCGCTGGGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: QRTKRLIAFTMDRRT*YWERGGSTPPPLGP Trigger: AGGCCCCAGCGGTGGTGGCGTGGAGCCTCCTCTCTCCCAGTATCAGGTGCGCCGGTCCATCGTGAAAGCAATCAGCCTTTTGGTTCGTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178253.8 |
||
| CDS CCA 90 bp | TTCATAGGTACTGGTGATGCAGATCATTGTGGGCCCCAGGATGTCTaGGACGATCCAGAATCCTCGAATTGGAGCTGGCTGCCTGCACGG | + |
|
Preference number: 5 (lower is better) Translates to: FIGTGDADHCGPQDV*DDPESSNWSWLPAR Trigger: CCGTGCAGGCAGCCAGCTCCAATTCGAGGATTCTGGATCGTCCCAGACATCCTGGGGCCCACAATGATCTGCATCACCAGTACCTATGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| CDS CCA 90 bp | ATCCAAGTCAGCCCCACACTGTGCACGCCAGCTTCATGGCTGCAGTaGTATCTCGAAGGACACTTGGGATCTCTGTGCAGTTTAATTGGG | + |
|
Preference number: 5 (lower is better) Translates to: IQVSPTLCTPASWLQ*YLEGHLGSLCSLIG Trigger: CCCAATTAAACTGCACAGAGATCCCAAGTGTCCTTCGAGATACCACTGCAGCCATGAAGCTGGCGTGCACAGTGTGGGGCTGACTTGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| CDS TCA 90 bp | CTATCCTTATCTTCTTCATCCGATCCAAGAAATTTGTGCAGTTTGTaGATCCAAGTCAGCCCCACACTGTGCACGCCAGCTTCATGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LSLSSSSDPRNLCSL*IQVSPTLCTPASWL Trigger: CAGCCATGAAGCTGGCGTGCACAGTGTGGGGCTGACTTGGATTCACAAACTGCACAAATTTCTTGGATCGGATGAAGAAGATAAGGATAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| CDS GCA 90 bp | ATTGGAGCTGGCTGCCTGCACGGCAATGGCTTTGTACAAAGAATGTaGTCCACAAAGCATTTCTGCTCAGCAGTGAGTTCTTGTAAACTA | + |
|
Preference number: 5 (lower is better) Translates to: IGAGCLHGNGFVQRM*STKHFCSAVSSCKL Trigger: TAGTTTACAAGAACTCACTGCTGAGCAGAAATGCTTTGTGGAGCACATTCTTTGTACAAAGCCATTGCCGTGCAGGCAGCCAGCTCCAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| CDS-3UTR CAA 90 bp | CCACACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTTCCAGAATCCTCGAATaGGAGCTGGCTGCCTGCACG | + |
|
Preference number: 5 (lower is better) Translates to: PHQILSKMLLYKLNSAPCSRILE*ELAACT Trigger: CGTGCAGGCAGCCAGCTCCAATTCGAGGATTCTGGA...ACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| CDS-3UTR CAA 90 bp | CCACACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTAACTTCAGCATCTTCTaGGGTACAGAGCAGGGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: PHQILSKMLLYKLNSAPCNFSIF*GTEQGR Trigger: CCTCCCCTGCTCTGTACCCAAGAAGATGCTGAAGTT...ACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| CDS-3UTR CAA 90 bp | CCACACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTTTGAGAAATGCTGGGTaGGCAGCACTACGCTGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: PHQILSKMLLYKLNSAPCLRNAG*AALRCK Trigger: CTTGCAGCGTAGTGCTGCCAACCCAGCATTTCTCAA...ACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| CDS TCA 90 bp | TTTTTCATAGTAACCTGTTTGATGGCGTTGCCTAGATGTCGCAGTTaGTCAGGTATCAGCTGTAACTCTTTCTTCATGTCTCTCTCACTG | + |
|
Preference number: 5 (lower is better) Translates to: FFIVTCLMALPRCRS*SGISCNSFFMSLSL Trigger: CAGTGAGAGAGACATGAAGAAAGAGTTACAGCTGATACCTGATCAACTGCGACATCTAGGCAACGCCATCAAACAGGTTACTATGAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| CDS GCA 90 bp | CTTGCAGAACAGTTTTTGAGAAATGCTGGGTTGGCAGCACTACGCTaGAAGATTCTTTTAATATGCTTCTCAAAGGAGTCTGGAGTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LAEQFLRNAGLAALR*KILLICFSKESGVS Trigger: TGAAACTCCAGACTCCTTTGAGAAGCATATTAAAAGAATCTTGCAGCGTAGTGCTGCCAACCCAGCATTTCTCAAAAACTGTTCTGCAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035283.11 ENSMUST00000108531.8 |
||
| CDS-3UTR CAA 90 bp | CCACACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTGATCCAGCATCTCACTaGGATACCATGCAGCATGCT | + |
|
Preference number: 5 (lower is better) Translates to: PHQILSKMLLYKLNSAPCDPASH*DTMQHA Trigger: AGCATGCTGCATGGTATCCAAGTGAGATGCTGGATC...ACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| CDS-3UTR CAA 90 bp | CACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTTTGTTGAGAAATGCTGGGTaGGCAGCACTACGCTGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: HQILSKMLLYKLNSAPCLLRNAG*AALRCK Trigger: CTTGCAGCGTAGTGCTGCCAACCCAGCATTTCTCAA...CAAACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| CDS-3UTR CAA 90 bp | CACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTTTGTTGGCCAGGTCCTGCTaGAGAATGTACTGTTCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: HQILSKMLLYKLNSAPCLLARSC*RMYCSR Trigger: CCGAGAACAGTACATTCTCAAGCAGGACCTGGCCAA...CAAACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| CDS-3UTR CAA 90 bp | CCACACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTTGCACGGCAATGGCTTaGTACAAAGAATGTGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: PHQILSKMLLYKLNSAPCCTAMA*YKECAP Trigger: TGGAGCACATTCTTTGTACAAAGCCATTGCCGTGCA...ACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTGTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| CDS-3UTR CAA 90 bp | CCACACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTGTTCAAATATATTCTTaGAGACGGTTACCAGGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: PHQILSKMLLYKLNSAPCVQIYS*RRLPGA Trigger: GGCCCCTGGTAACCGTCTCAAAGAATATATTTGAAC...ACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTGTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| CDS-3UTR CAA 90 bp | CACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTTTGTGCACGGCAATGGCTTaGTACAAAGAATGTGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: HQILSKMLLYKLNSAPCLCTAMA*YKECAP Trigger: TGGAGCACATTCTTTGTACAAAGCCATTGCCGTGCA...CAAACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| CDS-3UTR CAA 90 bp | CCACACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTCTTGCAGAACAGTTTTaGAGAAATGCTGGGTTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: PHQILSKMLLYKLNSAPCLAEQF*RNAGLA Trigger: TGCCAACCCAGCATTTCTCAAAAACTGTTCTGCAAG...ACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTGTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035283.11 ENSMUST00000108531.8 |
||
| CDS-3UTR CAA 90 bp | CCACACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTCTACATGATGTTGGGTaGGACTCAACAAGACTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: PHQILSKMLLYKLNSAPCLHDVG*DSTRLD Trigger: ATCAAGTCTTGTTGAGTCCAACCCAACATCATGTAG...ACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTGTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| CDS-3UTR CAA 90 bp | CACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTTTGGTTCAAATATATTCTTaGAGACGGTTACCAGGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: HQILSKMLLYKLNSAPCLVQIYS*RRLPGA Trigger: GGCCCCTGGTAACCGTCTCAAAGAATATATTTGAAC...CAAACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| CDS-3UTR CAA 90 bp | CACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTTTGCTTGCAGAACAGTTTTaGAGAAATGCTGGGTTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: HQILSKMLLYKLNSAPCLLAEQF*RNAGLA Trigger: TGCCAACCCAGCATTTCTCAAAAACTGTTCTGCAAG...CAAACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035283.11 ENSMUST00000108531.8 |
||
| CDS-3UTR CAA 90 bp | CACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTTTGCTACATGATGTTGGGTaGGACTCAACAAGACTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: HQILSKMLLYKLNSAPCLLHDVG*DSTRLD Trigger: ATCAAGTCTTGTTGAGTCCAACCCAACATCATGTAG...CAAACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| CDS-3UTR CAA 90 bp | CCACACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTATTGAGATCTTCGAGTaGTTTCCTCTTTTGGTCACA | + |
|
Preference number: 5 (lower is better) Translates to: PHQILSKMLLYKLNSAPCIEIFE*FPLLVT Trigger: TGTGACCAAAAGAGGAAACAACTCGAAGATCTCAAT...ACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTGTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| CDS-3UTR CAA 90 bp | CCACACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTTCGGATGTCATTGATTaGCTTCACCATTTCCCTTAT | + |
|
Preference number: 5 (lower is better) Translates to: PHQILSKMLLYKLNSAPCSDVID*LHHFPY Trigger: ATAAGGGAAATGGTGAAGCAAATCAATGACATCCGA...ACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTGTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| CDS-3UTR CAA 90 bp | CACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTTTGTCCTTTTCAGATGATTaGAGAAATGCTGGGTTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: HQILSKMLLYKLNSAPCLSFSDD*RNAGLA Trigger: TGCCAACCCAGCATTTCTCAAATCATCTGAAAAGGA...CAAACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108530.2 |
||
| CDS-3UTR CAA 90 bp | CCACACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTTGCTACAATTCACAGTaGCTTTTCCACCTTCAAATT | + |
|
Preference number: 5 (lower is better) Translates to: PHQILSKMLLYKLNSAPCCYNSQ*LFHLQI Trigger: AATTTGAAGGTGGAAAAGCAACTGTGAATTGTAGCA...ACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTGTGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| CDS-3UTR CAA 90 bp | CCACACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTCAATTACTAAGATATTaGGAACACAGGGCAAACAGA | + |
|
Preference number: 5 (lower is better) Translates to: PHQILSKMLLYKLNSAPCQLLRY*EHRANR Trigger: TCTGTTTGCCCTGTGTTCCAAATATCTTAGTAATTG...ACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTGTGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| CDS-3UTR CAA 90 bp | CACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTTTGATTGAGATCTTCGAGTaGTTTCCTCTTTTGGTCACA | + |
|
Preference number: 5 (lower is better) Translates to: HQILSKMLLYKLNSAPCLIEIFE*FPLLVT Trigger: TGTGACCAAAAGAGGAAACAACTCGAAGATCTCAAT...CAAACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| CDS-3UTR CAA 90 bp | CACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTTTGTCGGATGTCATTGATTaGCTTCACCATTTCCCTTAT | + |
|
Preference number: 5 (lower is better) Translates to: HQILSKMLLYKLNSAPCLSDVID*LHHFPY Trigger: ATAAGGGAAATGGTGAAGCAAATCAATGACATCCGA...CAAACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| CDS-3UTR CAA 90 bp | CACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTTTGTGCTACAATTCACAGTaGCTTTTCCACCTTCAAATT | + |
|
Preference number: 5 (lower is better) Translates to: HQILSKMLLYKLNSAPCLCYNSQ*LFHLQI Trigger: AATTTGAAGGTGGAAAAGCAACTGTGAATTGTAGCA...CAAACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| CDS-3UTR CAA 90 bp | CACCAAATCTTATCCAAAATGCTCCTTTATAAATTAAACAGTGCTCCCTGTTTGCAATTACTAAGATATTaGGAACACAGGGCAAACAGA | + |
|
Preference number: 5 (lower is better) Translates to: HQILSKMLLYKLNSAPCLQLLRY*EHRANR Trigger: TCTGTTTGCCCTGTGTTCCAAATATCTTAGTAATTG...CAAACAGGGAGCACTGTTTAATTTATAAAGGAGCATTTTGGATAAGATTTGGTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| CDS CCA 72 bp | GATACTGGGAGAGAGGAGGCTCCACGCCACCACCGCTaGGGCCTCGAAGGCGAACCACCAAGAAGGCGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: DTGREEAPRHHR*GLEGEPPRRRC Trigger: GCAGCGCCTTCTTGGTGGTTCGCCTTCGAGGCCCCAGCGGTGGTGGCGTGGAGCCTCCTCTCTCCCAGTATC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 ENSMUST00000178253.8 |
||
| CDS GCA 72 bp | CGCTGGGGCCTCGAAGGCGAACCACCAAGAAGGCGCTaGCTTCTGCGTCCCACAGAAACAGTTCCCCTCCGA | + |
|
Preference number: 6 (lower is better) Translates to: RWGLEGEPPRRR*LLRPTETVPLR Trigger: TCGGAGGGGAACTGTTTCTGTGGGACGCAGAAGGCAGCGCCTTCTTGGTGGTTCGCCTTCGAGGCCCCAGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 ENSMUST00000178253.8 |
||
| CDS GCA 72 bp | GCCTCGAAGGCGAACCACCAAGAAGGCGCTGCCTTCTaGGTCCCACAGAAACAGTTCCCCTCCGAGGCCGAA | + |
|
Preference number: 6 (lower is better) Translates to: ASKANHQEGAAF*VPQKQFPSEAE Trigger: TTCGGCCTCGGAGGGGAACTGTTTCTGTGGGACGCAGAAGGCAGCGCCTTCTTGGTGGTTCGCCTTCGAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 ENSMUST00000178253.8 |
||
| CDS CCA 72 bp | TTTCTTACGCCCTCGCGGAGCCGCAAGAACACGACGTaGTTAGGAAGCCAGCTCTGCCACAGCTCCCCATCG | + |
|
Preference number: 6 (lower is better) Translates to: FLTPSRSRKNTT*LGSQLCHSSPS Trigger: CGATGGGGAGCTGTGGCAGAGCTGGCTTCCTAACCACGTCGTGTTCTTGCGGCTCCGCGAGGGCGTAAGAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| CDS CAA 72 bp | GCCCCAGGATGTCTGGGACGATCCAGAATCCTCGAATaGGAGCTGGCTGCCTGCACGGCAATGGCTTTGTAC | + |
|
Preference number: 6 (lower is better) Translates to: APGCLGRSRILE*ELAACTAMALY Trigger: GTACAAAGCCATTGCCGTGCAGGCAGCCAGCTCCAATTCGAGGATTCTGGATCGTCCCAGACATCCTGGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| CDS CCA 72 bp | AGCCCCACACTGTGCACGCCAGCTTCATGGCTGCAGTaGTATCTCGAAGGACACTTGGGATCTCTGTGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: SPTLCTPASWLQ*YLEGHLGSLCS Trigger: ACTGCACAGAGATCCCAAGTGTCCTTCGAGATACCACTGCAGCCATGAAGCTGGCGTGCACAGTGTGGGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| CDS CCA 72 bp | CCCCAGGATGTCTGGGACGATCCAGAATCCTCGAATTaGAGCTGGCTGCCTGCACGGCAATGGCTTTGTACA | + |
|
Preference number: 6 (lower is better) Translates to: PQDVWDDPESSN*SWLPARQWLCT Trigger: TGTACAAAGCCATTGCCGTGCAGGCAGCCAGCTCCAATTCGAGGATTCTGGATCGTCCCAGACATCCTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
||
| CDS GCA 72 bp | AAGTCAGCCCCACACTGTGCACGCCAGCTTCATGGCTaGAGTGGTATCTCGAAGGACACTTGGGATCTCTGT | + |
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Preference number: 6 (lower is better) Translates to: KSAPHCARQLHG*SGISKDTWDLC Trigger: ACAGAGATCCCAAGTGTCCTTCGAGATACCACTGCAGCCATGAAGCTGGCGTGCACAGTGTGGGGCTGACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
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| CDS CAA 90 bp | CTGTGCACGCCAGCTTCATGGCTGCAGTGGTATCTCGAAGGACACTaGGGATCTCTGTGCAGTTTAATTGGGCAGGAAAAGTCAGAGGCA | + |
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Preference number: 6 (lower is better) Translates to: LCTPASWLQWYLEGH*GSLCSLIGQEKSEA Trigger: TGCCTCTGACTTTTCCTGCCCAATTAAACTGCACAGAGATCCCAAGTGTCCTTCGAGATACCACTGCAGCCATGAAGCTGGCGTGCACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
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| CDS CCA 72 bp | TCTCGAAGGACACTTGGGATCTCTGTGCAGTTTAATTaGGCAGGAAAAGTCAGAGGCAAAGGGATCGTCCTC | + |
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Preference number: 6 (lower is better) Translates to: SRRTLGISVQFN*AGKVRGKGIVL Trigger: GAGGACGATCCCTTTGCCTCTGACTTTTCCTGCCCAATTAAACTGCACAGAGATCCCAAGTGTCCTTCGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
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| CDS CAA 72 bp | CCAGCTTCATGGCTGCAGTGGTATCTCGAAGGACACTaGGGATCTCTGTGCAGTTTAATTGGGCAGGAAAAG | + |
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Preference number: 6 (lower is better) Translates to: PASWLQWYLEGH*GSLCSLIGQEK Trigger: CTTTTCCTGCCCAATTAAACTGCACAGAGATCCCAAGTGTCCTTCGAGATACCACTGCAGCCATGAAGCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
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| CDS CAA 72 bp | CTCGAATTGGAGCTGGCTGCCTGCACGGCAATGGCTTaGTACAAAGAATGTGCTCCACAAAGCATTTCTGCT | + |
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Preference number: 6 (lower is better) Translates to: LELELAACTAMA*YKECAPQSISA Trigger: AGCAGAAATGCTTTGTGGAGCACATTCTTTGTACAAAGCCATTGCCGTGCAGGCAGCCAGCTCCAATTCGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
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| CDS TCA 72 bp | TCTTCTTCATCCGATCCAAGAAATTTGTGCAGTTTGTaGATCCAAGTCAGCCCCACACTGTGCACGCCAGCT | + |
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Preference number: 6 (lower is better) Translates to: SSSSDPRNLCSL*IQVSPTLCTPA Trigger: AGCTGGCGTGCACAGTGTGGGGCTGACTTGGATTCACAAACTGCACAAATTTCTTGGATCGGATGAAGAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
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| CDS TCA 72 bp | CAGCTAAGCGCTCAGCCATTTCCCGGAGACTTTTCCTaGAGAGATGAGAAACCCTTTCCTCTCGACAGTAAT | + |
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Preference number: 6 (lower is better) Translates to: QLSAQPFPGDFS*RDEKPFPLDSN Trigger: ATTACTGTCGAGAGGAAAGGGTTTCTCATCTCTTCAGGAAAAGTCTCCGGGAAATGGCTGAGCGCTTAGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035283.11 |
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| CDS CAA 72 bp | GCCAAATCCTTTTCAGATGATCTTGCAGAACAGTTTTaGAGAAATGCTGGGTTGGCAGCACTACGCTGCAAG | + |
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Preference number: 6 (lower is better) Translates to: AKSFSDDLAEQF*RNAGLAALRCK Trigger: CTTGCAGCGTAGTGCTGCCAACCCAGCATTTCTCAAAAACTGTTCTGCAAGATCATCTGAAAAGGATTTGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035283.11 ENSMUST00000108531.8 |
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| CDS TCA 72 bp | CCAAATCCTTTTCAGATGATCTTGCAGAACAGTTTTTaGGAAATGCTGGGTTGGCAGCACTACGCTGCAAGA | + |
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Preference number: 6 (lower is better) Translates to: PNPFQMILQNSF*EMLGWQHYAAR Trigger: TCTTGCAGCGTAGTGCTGCCAACCCAGCATTTCTCAAAAACTGTTCTGCAAGATCATCTGAAAAGGATTTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035283.11 ENSMUST00000108531.8 |
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| CDS TCA 72 bp | GTAACCTGTTTGATGGCGTTGCCTAGATGTCGCAGTTaGTCAGGTATCAGCTGTAACTCTTTCTTCATGTCT | + |
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Preference number: 6 (lower is better) Translates to: VTCLMALPRCRS*SGISCNSFFMS Trigger: AGACATGAAGAAAGAGTTACAGCTGATACCTGATCAACTGCGACATCTAGGCAACGCCATCAAACAGGTTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035283.11 ENSMUST00000108530.2 ENSMUST00000108531.8 |
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| CDS CAA 72 bp | GATGATCTTGCAGAACAGTTTTTGAGAAATGCTGGGTaGGCAGCACTACGCTGCAAGATTCTTTTAATATGC | + |
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Preference number: 6 (lower is better) Translates to: DDLAEQFLRNAG*AALRCKILLIC Trigger: GCATATTAAAAGAATCTTGCAGCGTAGTGCTGCCAACCCAGCATTTCTCAAAAACTGTTCTGCAAGATCATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035283.11 ENSMUST00000108531.8 |
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