Pregenerated sensors for NUP50 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000016619Ensembl transcript IDs: ENSMUST00000165443.4, ENSMUST00000230411.2
Found 112 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCACAGGAAGGAAACGGGCGGTGTCTTCAGGAACACTGGGTCTCCTaGGGAAGGCAGAGAGCGGCACCACTGCTGCCTGAGGGAGCCTTT | + |
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Preference number: 1 (lower is better) Translates to: PQEGNGRCLQEHWVS*GRQRAAPLLPEGAF Trigger: AAAGGCTCCCTCAGGCAGCAGTGGTGCCGCTCTCTGCCTTCCCCAGGAGACCCAGTGTTCCTGAAGACACCGCCCGTTTCCTTCCTGTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165443.4 |
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| 3UTR CCA 90 bp | CAGACAAGCCCACAGGAAGGAAACGGGCGGTGTCTTCAGGAACACTaGGTCTCCTGGGGAAGGCAGAGAGCGGCACCACTGCTGCCTGAG | + |
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Preference number: 1 (lower is better) Translates to: QTSPQEGNGRCLQEH*VSWGRQRAAPLLPE Trigger: CTCAGGCAGCAGTGGTGCCGCTCTCTGCCTTCCCCAGGAGACCCAGTGTTCCTGAAGACACCGCCCGTTTCCTTCCTGTGGGCTTGTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165443.4 |
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| 3UTR CCA 90 bp | CAGACCCAGTCTGTCCACCGCCAGCTCCCCACGAGCCACCACTCATaGTCTTTCCCATGGAAAGGCGGTTCCTGGTTCAGTCAAGCAGCT | + |
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Preference number: 1 (lower is better) Translates to: QTQSVHRQLPTSHHS*SFPWKGGSWFSQAA Trigger: AGCTGCTTGACTGAACCAGGAACCGCCTTTCCATGGGAAAGACCATGAGTGGTGGCTCGTGGGGAGCTGGCGGTGGACAGACTGGGTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165443.4 |
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| 3UTR TCA 90 bp | ACACTGGGTCTCCTGGGGAAGGCAGAGAGCGGCACCACTGCTGCCTaGGGGAGCCTTTGGAGAGCTAACTGGTACCCTGATTATAGTCCA | + |
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Preference number: 1 (lower is better) Translates to: TLGLLGKAESGTTAA*GSLWRANWYPDYSP Trigger: TGGACTATAATCAGGGTACCAGTTAGCTCTCCAAAGGCTCCCTCAGGCAGCAGTGGTGCCGCTCTCTGCCTTCCCCAGGAGACCCAGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165443.4 |
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| 3UTR GCA 90 bp | GCTTCTCATGAGCACACGGCTCGTGAGAGAACTCCATTCAGACTGTaGCCACCAGGGCTCAGCAGGGCACAAACGGCCATGAGCACACAA | + |
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Preference number: 1 (lower is better) Translates to: ASHEHTARERTPFRL*PPGLSRAQTAMSTQ Trigger: TTGTGTGCTCATGGCCGTTTGTGCCCTGCTGAGCCCTGGTGGGCACAGTCTGAATGGAGTTCTCTCACGAGCCGTGTGCTCATGAGAAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165443.4 |
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| 3UTR TCA 90 bp | GGCTCTCTGAGGAGGACATGGCAGGGCTGGGAATGTGTCATAGTGTaGGCTATAGTGTGGGAAGGCCCAGGCTTAGCATCTGCCAGATGC | + |
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Preference number: 1 (lower is better) Translates to: GSLRRTWQGWECVIV*AIVWEGPGLASARC Trigger: GCATCTGGCAGATGCTAAGCCTGGGCCTTCCCACACTATAGCTCACACTATGACACATTCCCAGCCCTGCCATGTCCTCCTCAGAGAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165443.4 |
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| 3UTR CCA 90 bp | TGCCAAAATGCACAGAGCACTGTCACCCCACCTCAAGAACATCTCTaGGCTCAGGAGGCAGAGGCAGGTGGATCTGAGTTCAAGGCTAGC | + |
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Preference number: 1 (lower is better) Translates to: CQNAQSTVTPPQEHL*AQEAEAGGSEFKAS Trigger: GCTAGCCTTGAACTCAGATCCACCTGCCTCTGCCTCCTGAGCCCAGAGATGTTCTTGAGGTGGGGTGACAGTGCTCTGTGCATTTTGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165443.4 |
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| 3UTR CCA 90 bp | CCAACAGTCGGACCTGTCACTGACACAGACACAGCCTGTACAGTGTaGCTCTCTGAGGAGGACATGGCAGGGCTGGGAATGTGTCATAGT | + |
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Preference number: 1 (lower is better) Translates to: PTVGPVTDTDTACTV*LSEEDMAGLGMCHS Trigger: ACTATGACACATTCCCAGCCCTGCCATGTCCTCCTCAGAGAGCCACACTGTACAGGCTGTGTCTGTGTCAGTGACAGGTCCGACTGTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165443.4 |
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| 3UTR GCA 90 bp | CAGCATCTCCTTAGGTCCACAGCCCAAGAAGCACAAACATGCATCTaGAGATACGTGCCAAAATGCACAGAGCACTGTCACCCCACCTCA | + |
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Preference number: 1 (lower is better) Translates to: QHLLRSTAQEAQTCI*RYVPKCTEHCHPTS Trigger: TGAGGTGGGGTGACAGTGCTCTGTGCATTTTGGCACGTATCTGCAGATGCATGTTTGTGCTTCTTGGGCTGTGGACCTAAGGAGATGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165443.4 |
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| 3UTR GCA 90 bp | CGTGTCAGCCCCACAGGCACGTGGCTACACAGTACTGTTCTGAAATaGACACCCCTTGTTTCATCTTTGGAAAGCTGGGAAGCCCAATGT | + |
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Preference number: 1 (lower is better) Translates to: RVSPTGTWLHSTVLK*TPLVSSLESWEAQC Trigger: ACATTGGGCTTCCCAGCTTTCCAAAGATGAAACAAGGGGTGTGCATTTCAGAACAGTACTGTGTAGCCACGTGCCTGTGGGGCTGACACG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165443.4 |
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| 3UTR GCA 90 bp | GGGCCAACAGAAGCAGCAACCTGCTTGCTAGGAACCAATTCTCCATaGTACAAGGCAAAACCAAACCAAACCGCACAGCATCTCCTTAGG | + |
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Preference number: 1 (lower is better) Translates to: GPTEAATCLLGTNSP*YKAKPNQTAQHLLR Trigger: CCTAAGGAGATGCTGTGCGGTTTGGTTTGGTTTTGCCTTGTAGCATGGAGAATTGGTTCCTAGCAAGCAGGTTGCTGCTTCTGTTGGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165443.4 |
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| 3UTR CCA 90 bp | AGTACTGTTCTGAAATGCACACCCCTTGTTTCATCTTTGGAAAGCTaGGAAGCCCAATGTGAAGAAGCCAGGGCCAGGGCCAACAGAAGC | + |
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Preference number: 1 (lower is better) Translates to: STVLKCTPLVSSLES*EAQCEEARARANRS Trigger: GCTTCTGTTGGCCCTGGCCCTGGCTTCTTCACATTGGGCTTCCCAGCTTTCCAAAGATGAAACAAGGGGTGTGCATTTCAGAACAGTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165443.4 |
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| 3UTR TCA 90 bp | TTCAGACGCCAAATAATATGCTGCTGTCTGAAGCTACGGGCCAAATaGGCCGTCTTCCACTCCCATACTCTTGCTTCTCATGAGCACACG | + |
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Preference number: 1 (lower is better) Translates to: FRRQIICCCLKLRAK*AVFHSHTLASHEHT Trigger: CGTGTGCTCATGAGAAGCAAGAGTATGGGAGTGGAAGACGGCTCATTTGGCCCGTAGCTTCAGACAGCAGCATATTATTTGGCGTCTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165443.4 |
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| 3UTR GCA 90 bp | CACTTTTACAAATCTGTGTTAAGGGACAGTCCTCAGGCTTGTGATTaGTTCTGGAGAGCACTTGGTGGCTGTGTACAGAGCATGTGGCTA | + |
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Preference number: 1 (lower is better) Translates to: HFYKSVLRDSPQACD*FWRALGGCVQSMWL Trigger: TAGCCACATGCTCTGTACACAGCCACCAAGTGCTCTCCAGAAGCAATCACAAGCCTGAGGACTGTCCCTTAACACAGATTTGTAAAAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165443.4 |
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| 3UTR CCA 90 bp | TACAAATCTGTGTTAAGGGACAGTCCTCAGGCTTGTGATTGCTTCTaGAGAGCACTTGGTGGCTGTGTACAGAGCATGTGGCTAGAAAGA | + |
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Preference number: 1 (lower is better) Translates to: YKSVLRDSPQACDCF*RALGGCVQSMWLER Trigger: TCTTTCTAGCCACATGCTCTGTACACAGCCACCAAGTGCTCTCCAGAAGCAATCACAAGCCTGAGGACTGTCCCTTAACACAGATTTGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165443.4 |
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| 3UTR-3UTR CCA 90 bp | CTGTGCCCACCAGGGCTCAGCAGGGCACAAACGGCCATGAGCACACAACCCTTTGAACACTGGGTCTCCTaGGGAAGGCAGAGAGCGGCA | + |
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Preference number: 2 (lower is better) Translates to: LCPPGLSRAQTAMSTQPFEHWVS*GRQRAA Trigger: TGCCGCTCTCTGCCTTCCCCAGGAGACCCAGTGTTC...AAAGGGTTGTGTGCTCATGGCCGTTTGTGCCCTGCTGAGCCCTGGTGGGCACAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165443.4 |
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| 3UTR-3UTR GCA 90 bp | AAGAACAGAGTGCCCTCCGGGGGCCTCCCTGTGACACTCAGACTTCATAGTGATGAGCGGCACCACTGCTaGCTGAGGGAGCCTTTGGAG | + |
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Preference number: 2 (lower is better) Translates to: KNRVPSGGLPVTLRLHSDERHHC*LREPLE Trigger: CTCCAAAGGCTCCCTCAGGCAGCAGTGGTGCCGCTC...ATCACTATGAAGTCTGAGTGTCACAGGGAGGCCCCCGGAGGGCACTCTGTTCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165443.4 |
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| 3UTR-3UTR GCA 90 bp | AACATCTCTGGGCTCAGGAGGCAGAGGCAGGTGGATCTGAGTTCAAGGCTAGCCACTCCATTCAGACTGTaGCCACCAGGGCTCAGCAGG | + |
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Preference number: 2 (lower is better) Translates to: NISGLRRQRQVDLSSRLATPFRL*PPGLSR Trigger: CCTGCTGAGCCCTGGTGGGCACAGTCTGAATGGAGT...GGCTAGCCTTGAACTCAGATCCACCTGCCTCTGCCTCCTGAGCCCAGAGATGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165443.4 |
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| 3UTR-3UTR GCA 90 bp | AACATCTCTGGGCTCAGGAGGCAGAGGCAGGTGGATCTGAGTTCAAGGCTAGCCAGCAACGTGGCAACATaGCTTGGTCAGCCTCAGTGC | + |
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Preference number: 2 (lower is better) Translates to: NISGLRRQRQVDLSSRLASNVAT*LGQPQC Trigger: GCACTGAGGCTGACCAAGGCATGTTGCCACGTTGCT...GGCTAGCCTTGAACTCAGATCCACCTGCCTCTGCCTCCTGAGCCCAGAGATGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165443.4 |
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| 3UTR-3UTR GCA 90 bp | AAGAACAGAGTGCCCTCCGGGGGCCTCCCTGTGACACTCAGACTTCATAGTGATCACAGTGTGGCGGTGTaGTGTCTGGCAGGAGTGCTA | + |
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Preference number: 2 (lower is better) Translates to: KNRVPSGGLPVTLRLHSDHSVAV*CLAGVL Trigger: TAGCACTCCTGCCAGACAGCACACCGCCACACTGTG...ATCACTATGAAGTCTGAGTGTCACAGGGAGGCCCCCGGAGGGCACTCTGTTCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165443.4 |
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| 3UTR-3UTR CCA 90 bp | CAACAGTCGGACCTGTCACTGACACAGACACAGCCTGTACAGTGTGGCTCTCTGACAAGTGTGCGCCCCTaGGTACTGACCCTGAGCCTT | + |
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Preference number: 2 (lower is better) Translates to: QQSDLSLTQTQPVQCGSLTSVRP*VLTLSL Trigger: AAGGCTCAGGGTCAGTACCCAGGGGCGCACACTTGT...CAGAGAGCCACACTGTACAGGCTGTGTCTGTGTCAGTGACAGGTCCGACTGTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165443.4 |
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| 3UTR-3UTR TCA 90 bp | AAGAACAGAGTGCCCTCCGGGGGCCTCCCTGTGACACTCAGACTTCATAGTGATGGGCACAAACGGCCATaGGCACACAACCCTTTTCAG | + |
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Preference number: 2 (lower is better) Translates to: KNRVPSGGLPVTLRLHSDGHKRP*AHNPFQ Trigger: CTGAAAAGGGTTGTGTGCTCATGGCCGTTTGTGCCC...ATCACTATGAAGTCTGAGTGTCACAGGGAGGCCCCCGGAGGGCACTCTGTTCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165443.4 |
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| 3UTR-3UTR GCA 90 bp | TCCCAACCTCACCTACAAGTGACAGAGCAGGCCATCTCCTTAAAATCCCACTCCAGAGAGCGGCACCACTaGTGCCTGAGGGAGCCTTTG | + |
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Preference number: 2 (lower is better) Translates to: SQPHLQVTEQAISLKSHSRERHH*CLREPL Trigger: CAAAGGCTCCCTCAGGCAGCAGTGGTGCCGCTCTCT...GGAGTGGGATTTTAAGGAGATGGCCTGCTCTGTCACTTGTAGGTGAGGTTGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165443.4 |
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| 3UTR-3UTR CCA 90 bp | AAGAACAGAGTGCCCTCCGGGGGCCTCCCTGTGACACTCAGACTTCATAGTGATACGAGCCACCACTCATaGTCTTTCCCATGGAAAGGC | + |
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Preference number: 2 (lower is better) Translates to: KNRVPSGGLPVTLRLHSDTSHHS*SFPWKG Trigger: GCCTTTCCATGGGAAAGACCATGAGTGGTGGCTCGT...ATCACTATGAAGTCTGAGTGTCACAGGGAGGCCCCCGGAGGGCACTCTGTTCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165443.4 |
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| 3UTR-3UTR CCA 90 bp | CTGTGCCCACCAGGGCTCAGCAGGGCACAAACGGCCATGAGCACACAACCCTTTCTTTGGAGAGCTAACTaGTACCCTGATTATAGTCCA | + |
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Preference number: 2 (lower is better) Translates to: LCPPGLSRAQTAMSTQPFLWRAN*YPDYSP Trigger: TGGACTATAATCAGGGTACCAGTTAGCTCTCCAAAG...AAAGGGTTGTGTGCTCATGGCCGTTTGTGCCCTGCTGAGCCCTGGTGGGCACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165443.4 |
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| 3UTR-3UTR CCA 90 bp | GACAGAGCAGGCCATCTCCTTAAAATCCCACTCCAGTGGTCTAAGTGGGTACTCTGTCTTCAGGAACACTaGGTCTCCTGGGGAAGGCAG | + |
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Preference number: 2 (lower is better) Translates to: DRAGHLLKIPLQWSKWVLCLQEH*VSWGRQ Trigger: CTGCCTTCCCCAGGAGACCCAGTGTTCCTGAAGACA...GAGTACCCACTTAGACCACTGGAGTGGGATTTTAAGGAGATGGCCTGCTCTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165443.4 |
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| 3UTR-3UTR TCA 90 bp | AAGAACAGAGTGCCCTCCGGGGGCCTCCCTGTGACACTCAGACTTCATAGTGATAAAATCCATTATTCCTaGCAGCCCCCGTCCATGCTA | + |
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Preference number: 2 (lower is better) Translates to: KNRVPSGGLPVTLRLHSDKIHYS*QPPSML Trigger: TAGCATGGACGGGGGCTGTCAGGAATAATGGATTTT...ATCACTATGAAGTCTGAGTGTCACAGGGAGGCCCCCGGAGGGCACTCTGTTCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000165443.4 |
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| 3UTR-3UTR TCA 90 bp | CCTGAAGAACTCCCAACCTCACCTACAAGTGACAGAGCAGGCCATCTCCTTAAAGGAAACGGCTTTCCCTaGCAGCAAGGTGAATTCCCC | + |
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Preference number: 2 (lower is better) Translates to: PEELPTSPTSDRAGHLLKGNGFP*QQGEFP Trigger: GGGGAATTCACCTTGCTGTCAGGGAAAGCCGTTTCC...TTTAAGGAGATGGCCTGCTCTGTCACTTGTAGGTGAGGTTGGGAGTTCTTCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165443.4 |
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| 3UTR-3UTR CCA 90 bp | CCTGAAGAACTCCCAACCTCACCTACAAGTGACAGAGCAGGCCATCTCCTTAAAACAGCCTGTACAGTGTaGCTCTCTGAGGAGGACATG | + |
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Preference number: 2 (lower is better) Translates to: PEELPTSPTSDRAGHLLKTACTV*LSEEDM Trigger: CATGTCCTCCTCAGAGAGCCACACTGTACAGGCTGT...TTTAAGGAGATGGCCTGCTCTGTCACTTGTAGGTGAGGTTGGGAGTTCTTCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165443.4 |
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| 3UTR-3UTR GCA 90 bp | AAAATGCACAGAGCACTGTCACCCCACCTCAAGAACATCTCTGGGCTCAGGAGGAGACGCCAAATAATATaGTGCTGTCTGAAGCTACGG | + |
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Preference number: 2 (lower is better) Translates to: KMHRALSPHLKNISGLRRRRQII*CCLKLR Trigger: CCGTAGCTTCAGACAGCAGCATATTATTTGGCGTCT...CCTCCTGAGCCCAGAGATGTTCTTGAGGTGGGGTGACAGTGCTCTGTGCATTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165443.4 |
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| 3UTR-3UTR CCA 90 bp | CCTGAAGAACTCCCAACCTCACCTACAAGTGACAGAGCAGGCCATCTCCTTAAACAGCGTGTAGAACCATaGCTCTCTTCCAAATGGACA | + |
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Preference number: 2 (lower is better) Translates to: PEELPTSPTSDRAGHLLKQRVEP*LSSKWT Trigger: TGTCCATTTGGAAGAGAGCCATGGTTCTACACGCTG...TTTAAGGAGATGGCCTGCTCTGTCACTTGTAGGTGAGGTTGGGAGTTCTTCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165443.4 |
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| 3UTR-3UTR GCA 90 bp | TCCATGTGCTGGCTACGAAGTCTGACGTCACTTTTACAAATCTGTGTTAAGGGACGCCAAATAATATGCTaGTGTCTGAAGCTACGGGCC | + |
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Preference number: 2 (lower is better) Translates to: SMCWLRSLTSLLQICVKGRQIIC*CLKLRA Trigger: GGCCCGTAGCTTCAGACAGCAGCATATTATTTGGCG...TCCCTTAACACAGATTTGTAAAAGTGACGTCAGACTTCGTAGCCAGCACATGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165443.4 |
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| 3UTR-3UTR CCA 90 bp | TCCATGTGCTGGCTACGAAGTCTGACGTCACTTTTACAAATCTGTGTTAAGGGACAGCTACACACACAGTaGAAGAAGAACAGAGTGCCC | + |
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Preference number: 2 (lower is better) Translates to: SMCWLRSLTSLLQICVKGQLHTQ*KKNRVP Trigger: GGGCACTCTGTTCTTCTTCCACTGTGTGTGTAGCTG...TCCCTTAACACAGATTTGTAAAAGTGACGTCAGACTTCGTAGCCAGCACATGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165443.4 |
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| 3UTR-3UTR TCA 90 bp | TCCATGTGCTGGCTACGAAGTCTGACGTCACTTTTACAAATCTGTGTTAAGGGAAGAGCACTGCCACCATaGAGAGACAAGTTCCTGAAA | + |
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Preference number: 2 (lower is better) Translates to: SMCWLRSLTSLLQICVKGRALPP*RDKFLK Trigger: TTTCAGGAACTTGTCTCTTCATGGTGGCAGTGCTCT...TCCCTTAACACAGATTTGTAAAAGTGACGTCAGACTTCGTAGCCAGCACATGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165443.4 |
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| 3UTR-3UTR TCA 90 bp | TCCCAACCTCACCTACAAGTGACAGAGCAGGCCATCTCCTTAAAATCCCACTCCACGTTAAACCATAAATaGAGTTTAAGCCATGGGTTG | + |
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Preference number: 2 (lower is better) Translates to: SQPHLQVTEQAISLKSHSTLNHK*SLSHGL Trigger: CAACCCATGGCTTAAACTTCATTTATGGTTTAACGT...GGAGTGGGATTTTAAGGAGATGGCCTGCTCTGTCACTTGTAGGTGAGGTTGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165443.4 |
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| 3UTR-3UTR CCA 90 bp | GCAGATACGTGCCAAAATGCACAGAGCACTGTCACCCCACCTCAAGAACATCTCGGTCCTAGTGTCAAATaGTTTTATGAGAAATGCAAG | + |
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Preference number: 2 (lower is better) Translates to: ADTCQNAQSTVTPPQEHLGPSVK*FYEKCK Trigger: CTTGCATTTCTCATAAAACCATTTGACACTAGGACC...GAGATGTTCTTGAGGTGGGGTGACAGTGCTCTGTGCATTTTGGCACGTATCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000165443.4 |
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| 3UTR-3UTR CCA 90 bp | TTATTGGGGGTGGGGGAGGTGTCTTACAGTAGCTCAAGCTGCTGTGAACTCAAATGGCTCTCTTCCAAATaGACATACTCAATAATACCT | + |
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Preference number: 2 (lower is better) Translates to: LLGVGEVSYSSSSCCELKWLSSK*TYSIIP Trigger: AGGTATTATTGAGTATGTCCATTTGGAAGAGAGCCA...TTTGAGTTCACAGCAGCTTGAGCTACTGTAAGACACCTCCCCCACCCCCAATAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000165443.4 |
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| 3UTR TCA 72 bp | CTCCTGGGGAAGGCAGAGAGCGGCACCACTGCTGCCTaGGGGAGCCTTTGGAGAGCTAACTGGTACCCTGAT | + |
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Preference number: 3 (lower is better) Translates to: LLGKAESGTTAA*GSLWRANWYPD Trigger: ATCAGGGTACCAGTTAGCTCTCCAAAGGCTCCCTCAGGCAGCAGTGGTGCCGCTCTCTGCCTTCCCCAGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165443.4 |
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| 3UTR GCA 72 bp | GAGCACACGGCTCGTGAGAGAACTCCATTCAGACTGTaGCCACCAGGGCTCAGCAGGGCACAAACGGCCATG | + |
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Preference number: 3 (lower is better) Translates to: EHTARERTPFRL*PPGLSRAQTAM Trigger: CATGGCCGTTTGTGCCCTGCTGAGCCCTGGTGGGCACAGTCTGAATGGAGTTCTCTCACGAGCCGTGTGCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165443.4 |
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| 3UTR CCA 72 bp | CGACAGATTCCCAGTACCCAGTCAGCTCAGAAGGAATaGGCAAGCGCGGTCGGTCACAGTGTGGCGGTGTGC | + |
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Preference number: 3 (lower is better) Translates to: RQIPSTQSAQKE*ASAVGHSVAVC Trigger: GCACACCGCCACACTGTGACCGACCGCGCTTGCCCATTCCTTCTGAGCTGACTGGGTACTGGGAATCTGTCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165443.4 |
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| 3UTR TCA 72 bp | GCTCCAGGTCAAAGGCCAGCACCAGCCGAGACAGGCTaGCGACAGATTCCCAGTACCCAGTCAGCTCAGAAG | + |
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Preference number: 3 (lower is better) Translates to: APGQRPAPAETG*RQIPSTQSAQK Trigger: CTTCTGAGCTGACTGGGTACTGGGAATCTGTCGTCAGCCTGTCTCGGCTGGTGCTGGCCTTTGACCTGGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165443.4 |
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| 3UTR GCA 72 bp | GAATGGGCAAGCGCGGTCGGTCACAGTGTGGCGGTGTaGTGTCTGGCAGGAGTGCTAGTCATGGTCAGACAA | + |
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Preference number: 3 (lower is better) Translates to: EWASAVGHSVAV*CLAGVLVMVRQ Trigger: TTGTCTGACCATGACTAGCACTCCTGCCAGACAGCACACCGCCACACTGTGACCGACCGCGCTTGCCCATTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165443.4 |
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| 3UTR CCA 72 bp | TCTGTCCACCGCCAGCTCCCCACGAGCCACCACTCATaGTCTTTCCCATGGAAAGGCGGTTCCTGGTTCAGT | + |
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Preference number: 3 (lower is better) Translates to: SVHRQLPTSHHS*SFPWKGGSWFS Trigger: ACTGAACCAGGAACCGCCTTTCCATGGGAAAGACCATGAGTGGTGGCTCGTGGGGAGCTGGCGGTGGACAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165443.4 |
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| 3UTR CCA 72 bp | CACCACTCATGGTCTTTCCCATGGAAAGGCGGTTCCTaGTTCAGTCAAGCAGCTCCAGGTCAAAGGCCAGCA | + |
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Preference number: 3 (lower is better) Translates to: HHSWSFPWKGGS*FSQAAPGQRPA Trigger: TGCTGGCCTTTGACCTGGAGCTGCTTGACTGAACCAGGAACCGCCTTTCCATGGGAAAGACCATGAGTGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165443.4 |
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| 3UTR CCA 72 bp | GACAGAGCAGGCCATCTCCTTAAAATCCCACTCCAGTaGTCTAAGTGGGTACTCTGCAGCCTCAAGGGGCTG | + |
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Preference number: 3 (lower is better) Translates to: DRAGHLLKIPLQ*SKWVLCSLKGL Trigger: CAGCCCCTTGAGGCTGCAGAGTACCCACTTAGACCACTGGAGTGGGATTTTAAGGAGATGGCCTGCTCTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165443.4 |
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| 3UTR TCA 72 bp | AGGAGGACATGGCAGGGCTGGGAATGTGTCATAGTGTaGGCTATAGTGTGGGAAGGCCCAGGCTTAGCATCT | + |
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Preference number: 3 (lower is better) Translates to: RRTWQGWECVIV*AIVWEGPGLAS Trigger: AGATGCTAAGCCTGGGCCTTCCCACACTATAGCTCACACTATGACACATTCCCAGCCCTGCCATGTCCTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165443.4 |
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| 3UTR GCA 72 bp | AAGAAGCCAGGGCCAGGGCCAACAGAAGCAGCAACCTaGTTGCTAGGAACCAATTCTCCATGCTACAAGGCA | + |
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Preference number: 3 (lower is better) Translates to: KKPGPGPTEAAT*LLGTNSPCYKA Trigger: TGCCTTGTAGCATGGAGAATTGGTTCCTAGCAAGCAGGTTGCTGCTTCTGTTGGCCCTGGCCCTGGCTTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165443.4 |
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| 3UTR GCA 72 bp | ATAGTGTGGGAAGGCCCAGGCTTAGCATCTGCCAGATaGACCCTGACCACAGAGAACACACACTTCCTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: IVWEGPGLASAR*TLTTENTHFLQ Trigger: CTGAAGGAAGTGTGTGTTCTCTGTGGTCAGGGTGCATCTGGCAGATGCTAAGCCTGGGCCTTCCCACACTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165443.4 |
||
| 3UTR CCA 72 bp | GGCCATCTCCTTAAAATCCCACTCCAGTGGTCTAAGTaGGTACTCTGCAGCCTCAAGGGGCTGTTTCTCATC | + |
|
Preference number: 3 (lower is better) Translates to: GHLLKIPLQWSK*VLCSLKGLFLI Trigger: GATGAGAAACAGCCCCTTGAGGCTGCAGAGTACCCACTTAGACCACTGGAGTGGGATTTTAAGGAGATGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165443.4 |
||
| 3UTR CCA 72 bp | GTGTTAAGGGACAGTCCTCAGGCTTGTGATTGCTTCTaGAGAGCACTTGGTGGCTGTGTACAGAGCATGTGG | + |
|
Preference number: 3 (lower is better) Translates to: VLRDSPQACDCF*RALGGCVQSMW Trigger: CCACATGCTCTGTACACAGCCACCAAGTGCTCTCCAGAAGCAATCACAAGCCTGAGGACTGTCCCTTAACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165443.4 |
||
| 3UTR TCA 72 bp | AAGGCATGGGCAGATGCTCACAGAGCACTGCCACCATaGAGAGACAAGTTCCTGAAAGTGCCTGTGAGTTTG | + |
|
Preference number: 3 (lower is better) Translates to: KAWADAHRALPP*RDKFLKVPVSL Trigger: CAAACTCACAGGCACTTTCAGGAACTTGTCTCTTCATGGTGGCAGTGCTCTGTGAGCATCTGCCCATGCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165443.4 |
||
| 3UTR TCA 72 bp | TCAGCCCCACAGGCACGTGGCTACACAGTACTGTTCTaGAATGCACACCCCTTGTTTCATCTTTGGAAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: SAPQARGYTVLF*NAHPLFHLWKA Trigger: AGCTTTCCAAAGATGAAACAAGGGGTGTGCATTTCAGAACAGTACTGTGTAGCCACGTGCCTGTGGGGCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165443.4 |
||
| 3UTR GCA 72 bp | GAAGCACAAACATGCATCTGCAGATACGTGCCAAAATaGACAGAGCACTGTCACCCCACCTCAAGAACATCT | + |
|
Preference number: 3 (lower is better) Translates to: EAQTCICRYVPK*TEHCHPTSRTS Trigger: AGATGTTCTTGAGGTGGGGTGACAGTGCTCTGTGCATTTTGGCACGTATCTGCAGATGCATGTTTGTGCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165443.4 |
||
| 3UTR TCA 72 bp | CAAATAATATGCTGCTGTCTGAAGCTACGGGCCAAATaGGCCGTCTTCCACTCCCATACTCTTGCTTCTCAT | + |
|
Preference number: 3 (lower is better) Translates to: QIICCCLKLRAK*AVFHSHTLASH Trigger: ATGAGAAGCAAGAGTATGGGAGTGGAAGACGGCTCATTTGGCCCGTAGCTTCAGACAGCAGCATATTATTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165443.4 |
||
| 3UTR TCA 72 bp | TTACAAATCTGTGTTAAGGGACAGTCCTCAGGCTTGTaGTTGCTTCTGGAGAGCACTTGGTGGCTGTGTACA | + |
|
Preference number: 3 (lower is better) Translates to: LQICVKGQSSGL*LLLESTWWLCT Trigger: TGTACACAGCCACCAAGTGCTCTCCAGAAGCAATCACAAGCCTGAGGACTGTCCCTTAACACAGATTTGTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165443.4 |
||
| 3UTR-3UTR CAA 90 bp | TGCACCCTGACCACAGAGAACACACACTTCCTTCAGGCAAATGTAAGACACAACAACTTTCTATTCTATTaGATTTTATTGGGGGTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: CTLTTENTHFLQANVRHNNFLFY*ILLGVG Trigger: CCCCACCCCCAATAAAATCAAATAGAATAGAAAGTT...GTTGTGTCTTACATTTGCCTGAAGGAAGTGTGTGTTCTCTGTGGTCAGGGTGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165443.4 |
||
| 3UTR CCA 72 bp | CCAGCTCGTCATCAAATCTCGAATTTAACCCATGTCTaGTCTTCAGAGAATACTAGTATTAGCAACCTCACC | + |
|
Preference number: 3 (lower is better) Translates to: PARHQISNLTHV*SSENTSISNLT Trigger: GGTGAGGTTGCTAATACTAGTATTCTCTGAAGACCAGACATGGGTTAAATTCGAGATTTGATGACGAGCTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165443.4 |
||
| 3UTR GCA 72 bp | TTTATTCTTTTGGTAAATATTCAAGGCATGGGCAGATaGTCACAGAGCACTGCCACCATGAAGAGACAAGTT | + |
|
Preference number: 3 (lower is better) Translates to: FILLVNIQGMGR*SQSTATMKRQV Trigger: AACTTGTCTCTTCATGGTGGCAGTGCTCTGTGAGCATCTGCCCATGCCTTGAATATTTACCAAAAGAATAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165443.4 |
||
| CDS-3UTR GCA 90 bp | CTGTGCCCACCAGGGCTCAGCAGGGCACAAACGGCCATGAGCACACAACCCTTTGCTGCTGCCGCCTCCTaGCGGACTCTCGGATGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LCPPGLSRAQTAMSTQPFAAAAS*RTLGCF Trigger: AAAGCATCCGAGAGTCCGGCAGGAGGCGGCAGCAGC...AAAGGGTTGTGTGCTCATGGCCGTTTGTGCCCTGCTGAGCCCTGGTGGGCACAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165443.4 |
||
| CDS-3UTR CCA 90 bp | GAAGGAAACGGGCGGTGTCTTCAGGAACACTGGGTCTCCTGGGGAAGGCAGAGACCCGGATCAGCATGGTaGCCGGGAGAGTGGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: EGNGRCLQEHWVSWGRQRPGSAW*PGEWAA Trigger: AGCAGCCCACTCTCCCGGCCACCATGCTGATCCGGG...TCTCTGCCTTCCCCAGGAGACCCAGTGTTCCTGAAGACACCGCCCGTTTCCTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165443.4 |
||
| CDS-3UTR GCA 90 bp | ACTAAGTTAGGGACGGAGGGGAAGCAGCAACGTGGCAACATGCCTTGGTCAGCCCATCTCTGCACTCGCTaGTGCCGCCTCCTGCCGGAC | + |
|
Preference number: 4 (lower is better) Translates to: TKLGTEGKQQRGNMPWSAHLCTR*CRLLPD Trigger: GTCCGGCAGGAGGCGGCAGCAGCGAGTGCAGAGATG...GGCTGACCAAGGCATGTTGCCACGTTGCTGCTTCCCCTCCGTCCCTAACTTAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165443.4 ENSMUST00000230411.2 |
||
| CDS-3UTR CCA 90 bp | ACTAAGTTAGGGACGGAGGGGAAGCAGCAACGTGGCAACATGCCTTGGTCAGCCCCCGGATCAGCATGGTaGCCGGGAGAGTGGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TKLGTEGKQQRGNMPWSAPGSAW*PGEWAA Trigger: AGCAGCCCACTCTCCCGGCCACCATGCTGATCCGGG...GGCTGACCAAGGCATGTTGCCACGTTGCTGCTTCCCCTCCGTCCCTAACTTAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000165443.4 ENSMUST00000230411.2 |
||
| CDS-3UTR GCA 90 bp | ACTAAGTTAGGGACGGAGGGGAAGCAGCAACGTGGCAACATGCCTTGGTCAGCCGCTGCTGCCGCCTCCTaGCGGACTCTCGGATGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: TKLGTEGKQQRGNMPWSAAAAAS*RTLGCF Trigger: AAAGCATCCGAGAGTCCGGCAGGAGGCGGCAGCAGC...GGCTGACCAAGGCATGTTGCCACGTTGCTGCTTCCCCTCCGTCCCTAACTTAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165443.4 ENSMUST00000230411.2 |
||
| CDS-3UTR GCA 90 bp | CAGTCAAGCAGCTCCAGGTCAAAGGCCAGCACCAGCCGAGACAGGCTGACGACAGGCTGCCTTGGGCTCTaGTGCTGTCTTTACATTGGA | + |
|
Preference number: 4 (lower is better) Translates to: QSSSSRSKASTSRDRLTTGCLGL*CCLYIG Trigger: TCCAATGTAAAGACAGCAGCAGAGCCCAAGGCAGCC...TGTCGTCAGCCTGTCTCGGCTGGTGCTGGCCTTTGACCTGGAGCTGCTTGACTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165443.4 |
||
| CDS-3UTR CCA 90 bp | AAAATGCACAGAGCACTGTCACCCCACCTCAAGAACATCTCTGGGCTCAGGAGGTCACCCGGATCAGCATaGTGGCCGGGAGAGTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: KMHRALSPHLKNISGLRRSPGSA*WPGEWA Trigger: AGCCCACTCTCCCGGCCACCATGCTGATCCGGGTGA...CCTCCTGAGCCCAGAGATGTTCTTGAGGTGGGGTGACAGTGCTCTGTGCATTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165443.4 |
||
| CDS-3UTR CCA 90 bp | AATGTGACTAAGTTAGGGACGGAGGGGAAGCAGCAACGTGGCAACATGCCTTGGTCACCCGGATCAGCATaGTGGCCGGGAGAGTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: NVTKLGTEGKQQRGNMPWSPGSA*WPGEWA Trigger: AGCCCACTCTCCCGGCCACCATGCTGATCCGGGTGA...CCAAGGCATGTTGCCACGTTGCTGCTTCCCCTCCGTCCCTAACTTAGTCACATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165443.4 ENSMUST00000230411.2 |
||
| CDS-3UTR GCA 90 bp | AATGTGACTAAGTTAGGGACGGAGGGGAAGCAGCAACGTGGCAACATGCCTTGGTCTTTCCTGTCCGGGTaGACGGCATGTTGGGGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: NVTKLGTEGKQQRGNMPWSFLSG*TACWGR Trigger: TCGCCCCCAACATGCCGTGCACCCGGACAGGAAAGA...CCAAGGCATGTTGCCACGTTGCTGCTTCCCCTCCGTCCCTAACTTAGTCACATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000165443.4 ENSMUST00000230411.2 |
||
| CDS-3UTR GCA 90 bp | AATGTGACTAAGTTAGGGACGGAGGGGAAGCAGCAACGTGGCAACATGCCTTGGCTTCTTCACCATCTCTaGACTCGCTGCTGCCGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: NVTKLGTEGKQQRGNMPWLLHHL*TRCCRL Trigger: GAGGCGGCAGCAGCGAGTGCAGAGATGGTGAAGAAG...CCAAGGCATGTTGCCACGTTGCTGCTTCCCCTCCGTCCCTAACTTAGTCACATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165443.4 ENSMUST00000230411.2 |
||
| CDS-3UTR GCA 90 bp | TCCCAACCTCACCTACAAGTGACAGAGCAGGCCATCTCCTTAAAATCCCACTCCTCTTTCCTGTCCGGGTaGACGGCATGTTGGGGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: SQPHLQVTEQAISLKSHSSFLSG*TACWGR Trigger: TCGCCCCCAACATGCCGTGCACCCGGACAGGAAAGA...GGAGTGGGATTTTAAGGAGATGGCCTGCTCTGTCACTTGTAGGTGAGGTTGGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165443.4 |
||
| CDS-3UTR CCA 90 bp | AGTCTGTCCACCGCCAGCTCCCCACGAGCCACCACTCATGGTCTTTCCCATGGACTGCTGTCTTTACATTaGAGAAGGGCGTGGCATTGT | + |
|
Preference number: 4 (lower is better) Translates to: SLSTASSPRATTHGLSHGLLSLH*RRAWHC Trigger: ACAATGCCACGCCCTTCTCCAATGTAAAGACAGCAG...TCCATGGGAAAGACCATGAGTGGTGGCTCGTGGGGAGCTGGCGGTGGACAGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165443.4 |
||
| CDS-3UTR CCA 90 bp | AATGTGACTAAGTTAGGGACGGAGGGGAAGCAGCAACGTGGCAACATGCCTTGGCTGCTTCTCATCGAGTaGGGGGTTGGGGACACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: NVTKLGTEGKQQRGNMPWLLLIE*GVGDTD Trigger: GTCTGTGTCCCCAACCCCCCACTCGATGAGAAGCAG...CCAAGGCATGTTGCCACGTTGCTGCTTCCCCTCCGTCCCTAACTTAGTCACATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000165443.4 ENSMUST00000230411.2 |
||
| CDS-3UTR CCA 90 bp | ACTAAGTTAGGGACGGAGGGGAAGCAGCAACGTGGCAACATGCCTTGGTCAGCCCATTGGAGAAGGGCGTaGCATTGTCTGTGCTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: TKLGTEGKQQRGNMPWSAHWRRA*HCLCCF Trigger: GAAACAGCACAGACAATGCCACGCCCTTCTCCAATG...GGCTGACCAAGGCATGTTGCCACGTTGCTGCTTCCCCTCCGTCCCTAACTTAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165443.4 ENSMUST00000230411.2 |
||
| CDS-3UTR CCA 90 bp | CGTCACTTTTACAAATCTGTGTTAAGGGACAGTCCTCAGGCTTGTGATTGCTTCCAGGGCAGGCGGTACTaGAAGCAGGGCCGGAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RHFYKSVLRDSPQACDCFQGRRY*KQGRRR Trigger: CCTCCTCCGGCCCTGCTTCCAGTACCGCCTGCCCTG...GAAGCAATCACAAGCCTGAGGACTGTCCCTTAACACAGATTTGTAAAAGTGACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165443.4 |
||
| 3UTR CAA 72 bp | TACGGGCCAAATGAGCCGTCTTCCACTCCCATACTCTaGCTTCTCATGAGCACACGGCTCGTGAGAGAACTC | + |
|
Preference number: 4 (lower is better) Translates to: YGPNEPSSTPIL*LLMSTRLVREL Trigger: GAGTTCTCTCACGAGCCGTGTGCTCATGAGAAGCAAGAGTATGGGAGTGGAAGACGGCTCATTTGGCCCGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165443.4 |
||
| CDS-3UTR GCA 90 bp | AAAGCTGGGAAGCCCAATGTGAAGAAGCCAGGGCCAGGGCCAACAGAAGCAGCAGCGTGGCATTGTCTGTaGTGTTTCCATTTGTCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: KAGKPNVKKPGPGPTEAAAWHCL*CFHLSV Trigger: GACTGACAAATGGAAACAGCACAGACAATGCCACGC...TGCTGCTTCTGTTGGCCCTGGCCCTGGCTTCTTCACATTGGGCTTCCCAGCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165443.4 |
||
| CDS-3UTR GCA 90 bp | ACTAAGTTAGGGACGGAGGGGAAGCAGCAACGTGGCAACATGCCTTGGTCAGCCGCGTGGCATTGTCTGTaGTGTTTCCATTTGTCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: TKLGTEGKQQRGNMPWSAAWHCL*CFHLSV Trigger: GACTGACAAATGGAAACAGCACAGACAATGCCACGC...GGCTGACCAAGGCATGTTGCCACGTTGCTGCTTCCCCTCCGTCCCTAACTTAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165443.4 ENSMUST00000230411.2 |
||
| CDS-3UTR GCA 90 bp | AATGTGACTAAGTTAGGGACGGAGGGGAAGCAGCAACGTGGCAACATGCCTTGGGGCTGCCTTGGGCTCTaGTGCTGTCTTTACATTGGA | + |
|
Preference number: 4 (lower is better) Translates to: NVTKLGTEGKQQRGNMPWGCLGL*CCLYIG Trigger: TCCAATGTAAAGACAGCAGCAGAGCCCAAGGCAGCC...CCAAGGCATGTTGCCACGTTGCTGCTTCCCCTCCGTCCCTAACTTAGTCACATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165443.4 ENSMUST00000230411.2 |
||
| CDS-3UTR GCA 90 bp | ACTAAGTTAGGGACGGAGGGGAAGCAGCAACGTGGCAACATGCCTTGGTCAGCCTGTTGCTCCTTGTGCTaGGTCCGATTTCTTTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TKLGTEGKQQRGNMPWSACCSLC*VRFLFC Trigger: GCAGAAAAGAAATCGGACGCAGCACAAGGAGCAACA...GGCTGACCAAGGCATGTTGCCACGTTGCTGCTTCCCCTCCGTCCCTAACTTAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165443.4 ENSMUST00000230411.2 |
||
| CDS-3UTR CCA 90 bp | ACTAAGTTAGGGACGGAGGGGAAGCAGCAACGTGGCAACATGCCTTGGTCAGCCCTGCTGTCTTTACATTaGAGAAGGGCGTGGCATTGT | + |
|
Preference number: 4 (lower is better) Translates to: TKLGTEGKQQRGNMPWSALLSLH*RRAWHC Trigger: ACAATGCCACGCCCTTCTCCAATGTAAAGACAGCAG...GGCTGACCAAGGCATGTTGCCACGTTGCTGCTTCCCCTCCGTCCCTAACTTAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165443.4 ENSMUST00000230411.2 |
||
| CDS-3UTR CCA 90 bp | AATGTGACTAAGTTAGGGACGGAGGGGAAGCAGCAACGTGGCAACATGCCTTGGCACCACTACCTTGGGTaGCTCGTCATTCTCCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: NVTKLGTEGKQQRGNMPWHHYLG*LVILLF Trigger: GAAGAGGAGAATGACGAGCCACCCAAGGTAGTGGTG...CCAAGGCATGTTGCCACGTTGCTGCTTCCCCTCCGTCCCTAACTTAGTCACATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165443.4 ENSMUST00000230411.2 |
||
| 3UTR CAA 72 bp | AAGCCAGGGCCAGGGCCAACAGAAGCAGCAACCTGCTaGCTAGGAACCAATTCTCCATGCTACAAGGCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: KPGPGPTEAATC*LGTNSPCYKAK Trigger: TTTTGCCTTGTAGCATGGAGAATTGGTTCCTAGCAAGCAGGTTGCTGCTTCTGTTGGCCCTGGCCCTGGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165443.4 |
||
| CDS-3UTR TCA 90 bp | AAAGCTGGGAAGCCCAATGTGAAGAAGCCAGGGCCAGGGCCAACAGAAGCAGCAAAGAGCTGGGTCTTCTaGGTTGCTGTGGGTTTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: KAGKPNVKKPGPGPTEAAKSWVF*VAVGFK Trigger: TTTAAAACCCACAGCAACTCAGAAGACCCAGCTCTT...TGCTGCTTCTGTTGGCCCTGGCCCTGGCTTCTTCACATTGGGCTTCCCAGCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165443.4 |
||
| CDS-3UTR TCA 90 bp | ACTAAGTTAGGGACGGAGGGGAAGCAGCAACGTGGCAACATGCCTTGGTCAGCCAAGAGCTGGGTCTTCTaGGTTGCTGTGGGTTTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: TKLGTEGKQQRGNMPWSAKSWVF*VAVGFK Trigger: TTTAAAACCCACAGCAACTCAGAAGACCCAGCTCTT...GGCTGACCAAGGCATGTTGCCACGTTGCTGCTTCCCCTCCGTCCCTAACTTAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165443.4 ENSMUST00000230411.2 |
||
| CDS-3UTR GCA 90 bp | CATGACCAGCGTGTAGAACCATGGCTCTCTTCCAAATGGACATACTCAATAATACATCTCTGCACTCGCTaGTGCCGCCTCCTGCCGGAC | + |
|
Preference number: 4 (lower is better) Translates to: HDQRVEPWLSSKWTYSIIHLCTR*CRLLPD Trigger: GTCCGGCAGGAGGCGGCAGCAGCGAGTGCAGAGATG...TATTATTGAGTATGTCCATTTGGAAGAGAGCCATGGTTCTACACGCTGGTCATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165443.4 |
||
| CDS-3UTR GCA 90 bp | CAGTCAAGCAGCTCCAGGTCAAAGGCCAGCACCAGCCGAGACAGGCTGACGACAGCTGATTGCTGTTATTaGATTTGGGACTTGAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: QSSSSRSKASTSRDRLTTADCCY*IWDLKS Trigger: AGATTTCAAGTCCCAAATGCAATAACAGCAATCAGC...TGTCGTCAGCCTGTCTCGGCTGGTGCTGGCCTTTGACCTGGAGCTGCTTGACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165443.4 |
||
| CDS-3UTR CCA 90 bp | TCCCAACCTCACCTACAAGTGACAGAGCAGGCCATCTCCTTAAAATCCCACTCCCATTGGAGAAGGGCGTaGCATTGTCTGTGCTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SQPHLQVTEQAISLKSHSHWRRA*HCLCCF Trigger: GAAACAGCACAGACAATGCCACGCCCTTCTCCAATG...GGAGTGGGATTTTAAGGAGATGGCCTGCTCTGTCACTTGTAGGTGAGGTTGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165443.4 |
||
| CDS-3UTR GCA 90 bp | ACTAAGTTAGGGACGGAGGGGAAGCAGCAACGTGGCAACATGCCTTGGTCAGCCGTCCGATTTCTTTTCTaGTGTAAACTCCACCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: TKLGTEGKQQRGNMPWSAVRFLF*CKLHLF Trigger: GAAAAGGTGGAGTTTACAGCAGAAAAGAAATCGGAC...GGCTGACCAAGGCATGTTGCCACGTTGCTGCTTCCCCTCCGTCCCTAACTTAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000165443.4 ENSMUST00000230411.2 |
||
| CDS-3UTR CCA 90 bp | AATGTGACTAAGTTAGGGACGGAGGGGAAGCAGCAACGTGGCAACATGCCTTGGCTTTACCAAACAAGCTaGAGCTTCCAGCAGAGAATG | + |
|
Preference number: 4 (lower is better) Translates to: NVTKLGTEGKQQRGNMPWLYQTS*SFQQRM Trigger: CATTCTCTGCTGGAAGCTCCAGCTTGTTTGGTAAAG...CCAAGGCATGTTGCCACGTTGCTGCTTCCCCTCCGTCCCTAACTTAGTCACATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165443.4 ENSMUST00000230411.2 |
||
| CDS-3UTR GCA 90 bp | ACTAAGTTAGGGACGGAGGGGAAGCAGCAACGTGGCAACATGCCTTGGTCAGCCGAAAATGGTGACTCTTaGTGTAGTTTTGTTGAACCA | + |
|
Preference number: 4 (lower is better) Translates to: TKLGTEGKQQRGNMPWSAENGDS*CSFVEP Trigger: TGGTTCAACAAAACTACAGCAAGAGTCACCATTTTC...GGCTGACCAAGGCATGTTGCCACGTTGCTGCTTCCCCTCCGTCCCTAACTTAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000165443.4 ENSMUST00000230411.2 |
||
| CDS-3UTR GCA 90 bp | CATGACCAGCGTGTAGAACCATGGCTCTCTTCCAAATGGACATACTCAATAATACTTCTTCACCATCTCTaGACTCGCTGCTGCCGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: HDQRVEPWLSSKWTYSIILLHHL*TRCCRL Trigger: GAGGCGGCAGCAGCGAGTGCAGAGATGGTGAAGAAG...TATTATTGAGTATGTCCATTTGGAAGAGAGCCATGGTTCTACACGCTGGTCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165443.4 |
||
| CDS-3UTR GCA 90 bp | AAGAACAGAGTGCCCTCCGGGGGCCTCCCTGTGACACTCAGACTTCATAGTGATGAAAATGGTGACTCTTaGTGTAGTTTTGTTGAACCA | + |
|
Preference number: 4 (lower is better) Translates to: KNRVPSGGLPVTLRLHSDENGDS*CSFVEP Trigger: TGGTTCAACAAAACTACAGCAAGAGTCACCATTTTC...ATCACTATGAAGTCTGAGTGTCACAGGGAGGCCCCCGGAGGGCACTCTGTTCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000165443.4 |
||
| CDS-3UTR CCA 90 bp | CGTCACTTTTACAAATCTGTGTTAAGGGACAGTCCTCAGGCTTGTGATTGCTTCCACCACTACCTTGGGTaGCTCGTCATTCTCCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RHFYKSVLRDSPQACDCFHHYLG*LVILLF Trigger: GAAGAGGAGAATGACGAGCCACCCAAGGTAGTGGTG...GAAGCAATCACAAGCCTGAGGACTGTCCCTTAACACAGATTTGTAAAAGTGACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165443.4 |
||
| CDS-3UTR GCA 90 bp | TTATTGGGGGTGGGGGAGGTGTCTTACAGTAGCTCAAGCTGCTGTGAACTCAAAGTCCGATTTCTTTTCTaGTGTAAACTCCACCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LLGVGEVSYSSSSCCELKVRFLF*CKLHLF Trigger: GAAAAGGTGGAGTTTACAGCAGAAAAGAAATCGGAC...TTTGAGTTCACAGCAGCTTGAGCTACTGTAAGACACCTCCCCCACCCCCAATAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000165443.4 |
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| CDS-3UTR GCA 90 bp | CGTCACTTTTACAAATCTGTGTTAAGGGACAGTCCTCAGGCTTGTGATTGCTTCTGTTGCTCCTTGTGCTaGGTCCGATTTCTTTTCTGC | + |
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Preference number: 4 (lower is better) Translates to: RHFYKSVLRDSPQACDCFCCSLC*VRFLFC Trigger: GCAGAAAAGAAATCGGACGCAGCACAAGGAGCAACA...GAAGCAATCACAAGCCTGAGGACTGTCCCTTAACACAGATTTGTAAAAGTGACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165443.4 |
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| CDS-3UTR CCA 90 bp | CAAGATCTGGTCCTAGTGTCAAATGGTTTTATGAGAAATGCAAGTGGACTTTTACTGCTTCTCATCGAGTaGGGGGTTGGGGACACAGAC | + |
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Preference number: 4 (lower is better) Translates to: QDLVLVSNGFMRNASGLLLLLIE*GVGDTD Trigger: GTCTGTGTCCCCAACCCCCCACTCGATGAGAAGCAG...TAAAAGTCCACTTGCATTTCTCATAAAACCATTTGACACTAGGACCAGATCTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000165443.4 |
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| CDS-3UTR CCA 90 bp | CAAGATCTGGTCCTAGTGTCAAATGGTTTTATGAGAAATGCAAGTGGACTTTTACTTTACCAAACAAGCTaGAGCTTCCAGCAGAGAATG | + |
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Preference number: 4 (lower is better) Translates to: QDLVLVSNGFMRNASGLLLYQTS*SFQQRM Trigger: CATTCTCTGCTGGAAGCTCCAGCTTGTTTGGTAAAG...TAAAAGTCCACTTGCATTTCTCATAAAACCATTTGACACTAGGACCAGATCTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165443.4 |
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| CDS GCA 90 bp | ACCATCTCTGCACTCGCTGCTGCCGCCTCCTGCCGGACTCTCGGATaGTTTAGCAGAGAACAGCGAAGAGGCTGCTTTACTCTGGGCAGC | + |
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Preference number: 5 (lower is better) Translates to: TISALAAAASCRTLG*FSREQRRGCFTLGS Trigger: GCTGCCCAGAGTAAAGCAGCCTCTTCGCTGTTCTCTGCTAAAGCATCCGAGAGTCCGGCAGGAGGCGGCAGCAGCGAGTGCAGAGATGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165443.4 ENSMUST00000230411.2 |
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| CDS GCA 90 bp | GCTCCATTCCAGCCGTCGCCCTGTCTGTCTGGCTCTCAGAACTGCTaGCGCCTCCATTCTCAAGCTGCTTCTCGATCGTCGCCAAGTATC | + |
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Preference number: 5 (lower is better) Translates to: APFQPSPCLSGSQNC*RLHSQAASRSSPSI Trigger: GATACTTGGCGACGATCGAGAAGCAGCTTGAGAATGGAGGCGGCAGCAGTTCTGAGAGCCAGACAGACAGGGCGACGGCTGGAATGGAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165443.4 ENSMUST00000230411.2 |
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| CDS GCA 90 bp | ATTCTCCTCTTCTTCACCATCTCTGCACTCGCTGCTGCCGCCTCCTaGCGGACTCTCGGATGCTTTAGCAGAGAACAGCGAAGAGGCTGC | + |
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Preference number: 5 (lower is better) Translates to: ILLFFTISALAAAAS*RTLGCFSREQRRGC Trigger: GCAGCCTCTTCGCTGTTCTCTGCTAAAGCATCCGAGAGTCCGGCAGGAGGCGGCAGCAGCGAGTGCAGAGATGGTGAAGAAGAGGAGAAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165443.4 ENSMUST00000230411.2 |
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| CDS-3UTR CAA 90 bp | CAGTCAAGCAGCTCCAGGTCAAAGGCCAGCACCAGCCGAGACAGGCTGACGACAGAGAAGGGCGTGGCATaGTCTGTGCTGTTTCCATTT | + |
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Preference number: 5 (lower is better) Translates to: QSSSSRSKASTSRDRLTTEKGVA*SVLFPF Trigger: AAATGGAAACAGCACAGACAATGCCACGCCCTTCTC...TGTCGTCAGCCTGTCTCGGCTGGTGCTGGCCTTTGACCTGGAGCTGCTTGACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165443.4 |
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| CDS-3UTR CAA 90 bp | AGCCGAGACAGGCTGACGACAGATTCCCAGTACCCAGTCAGCTCAGAAGGAATGTCGGTCACCACTACCTaGGGTGGCTCGTCATTCTCC | + |
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Preference number: 5 (lower is better) Translates to: SRDRLTTDSQYPVSSEGMSVTTT*GGSSFS Trigger: GGAGAATGACGAGCCACCCAAGGTAGTGGTGACCGA...CATTCCTTCTGAGCTGACTGGGTACTGGGAATCTGTCGTCAGCCTGTCTCGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165443.4 |
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| CDS-3UTR CAA 90 bp | ACTAAGTTAGGGACGGAGGGGAAGCAGCAACGTGGCAACATGCCTTGGTCAGCCGCTGCTGTCTTTACATaGGAGAAGGGCGTGGCATTG | + |
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Preference number: 5 (lower is better) Translates to: TKLGTEGKQQRGNMPWSAAAVFT*EKGVAL Trigger: CAATGCCACGCCCTTCTCCAATGTAAAGACAGCAGC...GGCTGACCAAGGCATGTTGCCACGTTGCTGCTTCCCCTCCGTCCCTAACTTAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165443.4 ENSMUST00000230411.2 |
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| CDS-3UTR CAA 90 bp | AATGTGACTAAGTTAGGGACGGAGGGGAAGCAGCAACGTGGCAACATGCCTTGGGAGAAGGGCGTGGCATaGTCTGTGCTGTTTCCATTT | + |
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Preference number: 5 (lower is better) Translates to: NVTKLGTEGKQQRGNMPWEKGVA*SVLFPF Trigger: AAATGGAAACAGCACAGACAATGCCACGCCCTTCTC...CCAAGGCATGTTGCCACGTTGCTGCTTCCCCTCCGTCCCTAACTTAGTCACATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165443.4 ENSMUST00000230411.2 |
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| CDS-3UTR CAA 90 bp | ACCAAACCGCACAGCATCTCCTTAGGTCCACAGCCCAAGAAGCACAAACATGCAGCTGCTGTCTTTACATaGGAGAAGGGCGTGGCATTG | + |
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Preference number: 5 (lower is better) Translates to: TKPHSISLGPQPKKHKHAAAVFT*EKGVAL Trigger: CAATGCCACGCCCTTCTCCAATGTAAAGACAGCAGC...TGCATGTTTGTGCTTCTTGGGCTGTGGACCTAAGGAGATGCTGTGCGGTTTGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165443.4 |
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| CDS GCA 72 bp | TGGGTGGCTCGTCATTCTCCTCTTCTTCACCATCTCTaGACTCGCTGCTGCCGCCTCCTGCCGGACTCTCGG | + |
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Preference number: 6 (lower is better) Translates to: WVARHSPLLHHL*TRCCRLLPDSR Trigger: CCGAGAGTCCGGCAGGAGGCGGCAGCAGCGAGTGCAGAGATGGTGAAGAAGAGGAGAATGACGAGCCACCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165443.4 ENSMUST00000230411.2 |
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| CDS GCA 72 bp | CAGCCGTCGCCCTGTCTGTCTGGCTCTCAGAACTGCTaGCGCCTCCATTCTCAAGCTGCTTCTCGATCGTCG | + |
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Preference number: 6 (lower is better) Translates to: QPSPCLSGSQNC*RLHSQAASRSS Trigger: CGACGATCGAGAAGCAGCTTGAGAATGGAGGCGGCAGCAGTTCTGAGAGCCAGACAGACAGGGCGACGGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165443.4 ENSMUST00000230411.2 |
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| CDS CCA 72 bp | GAAGGAGGCTCCATTCCAGCCGTCGCCCTGTCTGTCTaGCTCTCAGAACTGCTGCCGCCTCCATTCTCAAGC | + |
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Preference number: 6 (lower is better) Translates to: EGGSIPAVALSV*LSELLPPPFSS Trigger: GCTTGAGAATGGAGGCGGCAGCAGTTCTGAGAGCCAGACAGACAGGGCGACGGCTGGAATGGAGCCTCCTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165443.4 ENSMUST00000230411.2 |
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| CDS GCA 72 bp | TTCCAGCCGTCGCCCTGTCTGTCTGGCTCTCAGAACTaGTGCCGCCTCCATTCTCAAGCTGCTTCTCGATCG | + |
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Preference number: 6 (lower is better) Translates to: FQPSPCLSGSQN*CRLHSQAASRS Trigger: CGATCGAGAAGCAGCTTGAGAATGGAGGCGGCAGCAGTTCTGAGAGCCAGACAGACAGGGCGACGGCTGGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165443.4 ENSMUST00000230411.2 |
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| CDS GCA 72 bp | GCACTCGCTGCTGCCGCCTCCTGCCGGACTCTCGGATaGTTTAGCAGAGAACAGCGAAGAGGCTGCTTTACT | + |
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Preference number: 6 (lower is better) Translates to: ALAAAASCRTLG*FSREQRRGCFT Trigger: AGTAAAGCAGCCTCTTCGCTGTTCTCTGCTAAAGCATCCGAGAGTCCGGCAGGAGGCGGCAGCAGCGAGTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165443.4 ENSMUST00000230411.2 |
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| CDS GCA 72 bp | TTCTTCACCATCTCTGCACTCGCTGCTGCCGCCTCCTaGCGGACTCTCGGATGCTTTAGCAGAGAACAGCGA | + |
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Preference number: 6 (lower is better) Translates to: FFTISALAAAAS*RTLGCFSREQR Trigger: TCGCTGTTCTCTGCTAAAGCATCCGAGAGTCCGGCAGGAGGCGGCAGCAGCGAGTGCAGAGATGGTGAAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165443.4 ENSMUST00000230411.2 |
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| CDS CCA 72 bp | TGGGCTCTGCTGCTGTCTTTACATTGGAGAAGGGCGTaGCATTGTCTGTGCTGTTTCCATTTGTCAGTCCTT | + |
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Preference number: 6 (lower is better) Translates to: WALLLSLHWRRA*HCLCCFHLSVL Trigger: AAGGACTGACAAATGGAAACAGCACAGACAATGCCACGCCCTTCTCCAATGTAAAGACAGCAGCAGAGCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165443.4 ENSMUST00000230411.2 |
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| CDS GCA 72 bp | ACTTGTTGCTCCTTGTGCTGCGTCCGATTTCTTTTCTaGTGTAAACTCCACCTTTTCAGATGTGTCCTCCGC | + |
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Preference number: 6 (lower is better) Translates to: TCCSLCCVRFLF*CKLHLFRCVLR Trigger: GCGGAGGACACATCTGAAAAGGTGGAGTTTACAGCAGAAAAGAAATCGGACGCAGCACAAGGAGCAACAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165443.4 ENSMUST00000230411.2 |
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