Pregenerated sensors for NUP37 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035351Ensembl transcript IDs: ENSMUST00000052355.15, ENSMUST00000169309.3, ENSMUST00000219121.2
Found 34 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCATATTTCTGTCACCCAGAACAAGAGCTTGTGGTCGCCTCCAACTaGACACAGTGGAAGTGTTCTATGCCAGGAAAGACCAGAACCGAC | + |
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Preference number: 1 (lower is better) Translates to: SYFCHPEQELVVASN*TQWKCSMPGKTRTD Trigger: GTCGGTTCTGGTCTTTCCTGGCATAGAACACTTCCACTGTGTGCAGTTGGAGGCGACCACAAGCTCTTGTTCTGGGTGACAGAAATATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219121.2 |
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| 3UTR CCA 90 bp | AATACAGAGGAAAATCATATTTCTGTCACCCAGAACAAGAGCTTGTaGTCGCCTCCAACTGCACACAGTGGAAGTGTTCTATGCCAGGAA | + |
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Preference number: 1 (lower is better) Translates to: NTEENHISVTQNKSL*SPPTAHSGSVLCQE Trigger: TTCCTGGCATAGAACACTTCCACTGTGTGCAGTTGGAGGCGACCACAAGCTCTTGTTCTGGGTGACAGAAATATGATTTTCCTCTGTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219121.2 |
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| 3UTR CAA 90 bp | AAAAATACAGAGGAAAATCATATTTCTGTCACCCAGAACAAGAGCTaGTGGTCGCCTCCAACTGCACACAGTGGAAGTGTTCTATGCCAG | + |
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Preference number: 2 (lower is better) Translates to: KNTEENHISVTQNKS*WSPPTAHSGSVLCQ Trigger: CTGGCATAGAACACTTCCACTGTGTGCAGTTGGAGGCGACCACAAGCTCTTGTTCTGGGTGACAGAAATATGATTTTCCTCTGTATTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219121.2 |
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| 3UTR GCA 72 bp | TGTCACCCAGAACAAGAGCTTGTGGTCGCCTCCAACTaGACACAGTGGAAGTGTTCTATGCCAGGAAAGACC | + |
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Preference number: 3 (lower is better) Translates to: CHPEQELVVASN*TQWKCSMPGKT Trigger: GGTCTTTCCTGGCATAGAACACTTCCACTGTGTGCAGTTGGAGGCGACCACAAGCTCTTGTTCTGGGTGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219121.2 |
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| 3UTR CCA 72 bp | GAACAAGAGCTTGTGGTCGCCTCCAACTGCACACAGTaGAAGTGTTCTATGCCAGGAAAGACCAGAACCGAC | + |
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Preference number: 3 (lower is better) Translates to: EQELVVASNCTQ*KCSMPGKTRTD Trigger: GTCGGTTCTGGTCTTTCCTGGCATAGAACACTTCCACTGTGTGCAGTTGGAGGCGACCACAAGCTCTTGTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219121.2 |
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| 3UTR CCA 72 bp | GAAAATCATATTTCTGTCACCCAGAACAAGAGCTTGTaGTCGCCTCCAACTGCACACAGTGGAAGTGTTCTA | + |
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Preference number: 3 (lower is better) Translates to: ENHISVTQNKSL*SPPTAHSGSVL Trigger: TAGAACACTTCCACTGTGTGCAGTTGGAGGCGACCACAAGCTCTTGTTCTGGGTGACAGAAATATGATTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219121.2 |
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| CDS-3UTR TCA 90 bp | CATATTTCTGTCACCCAGAACAAGAGCTTGTGGTCGCCTCCAACTGCACACAGTGGTGTCTGCTCTGACTaGAGAGATAAAATTGCCTGC | + |
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Preference number: 4 (lower is better) Translates to: HISVTQNKSLWSPPTAHSGVCSD*RDKIAC Trigger: GCAGGCAATTTTATCTCTTCAGTCAGAGCAGACACC...ACTGTGTGCAGTTGGAGGCGACCACAAGCTCTTGTTCTGGGTGACAGAAATATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219121.2 |
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| 3UTR CAA 72 bp | GAGGAAAATCATATTTCTGTCACCCAGAACAAGAGCTaGTGGTCGCCTCCAACTGCACACAGTGGAAGTGTT | + |
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Preference number: 4 (lower is better) Translates to: EENHISVTQNKS*WSPPTAHSGSV Trigger: AACACTTCCACTGTGTGCAGTTGGAGGCGACCACAAGCTCTTGTTCTGGGTGACAGAAATATGATTTTCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219121.2 |
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| CDS CCA 90 bp | GTGTGGTCGTCACTCACGCTTGCGAGCTCCTGGCCTTCTTTGGGATaGAACACCAGATCATTAATGAAGTCTGAGTGGCCCTCCAAAACC | + |
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Preference number: 5 (lower is better) Translates to: VWSSLTLASSWPSLG*NTRSLMKSEWPSKT Trigger: GGTTTTGGAGGGCCACTCAGACTTCATTAATGATCTGGTGTTCCATCCCAAAGAAGGCCAGGAGCTCGCAAGCGTGAGTGACGACCACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052355.15 ENSMUST00000169309.3 |
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| CDS GCA 90 bp | AAGAGCTTGTGGTCGCCTCCAACTGCACACAGTGGAAGTGTTCTATaGCAGGAAAGACCAGAACCGACAGCTACAGAACCAATGAGGACG | + |
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Preference number: 5 (lower is better) Translates to: KSLWSPPTAHSGSVL*QERPEPTATEPMRT Trigger: CGTCCTCATTGGTTCTGTAGCTGTCGGTTCTGGTCTTTCCTGGCATAGAACACTTCCACTGTGTGCAGTTGGAGGCGACCACAAGCTCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052355.15 ENSMUST00000169309.3 |
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| CDS CCA 90 bp | TGTCACCCAGAACAAGAGCTTGTGGTCGCCTCCAACTGCACACAGTaGAAGTGTTCTATGCCAGGAAAGACCAGAACCGACAGCTACAGA | + |
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Preference number: 5 (lower is better) Translates to: CHPEQELVVASNCTQ*KCSMPGKTRTDSYR Trigger: TCTGTAGCTGTCGGTTCTGGTCTTTCCTGGCATAGAACACTTCCACTGTGTGCAGTTGGAGGCGACCACAAGCTCTTGTTCTGGGTGACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052355.15 ENSMUST00000169309.3 |
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| CDS GCA 90 bp | TCCTTCCAAGTTCCAAATCCTGCAGGTGTGGTCGTCACTCACGCTTaGGAGCTCCTGGCCTTCTTTGGGATGGAACACCAGATCATTAAT | + |
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Preference number: 5 (lower is better) Translates to: SFQVPNPAGVVVTHA*ELLAFFGMEHQIIN Trigger: ATTAATGATCTGGTGTTCCATCCCAAAGAAGGCCAGGAGCTCGCAAGCGTGAGTGACGACCACACCTGCAGGATTTGGAACTTGGAAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052355.15 ENSMUST00000169309.3 |
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| CDS CCA 90 bp | TTCCAAATCCTGCAGGTGTGGTCGTCACTCACGCTTGCGAGCTCCTaGCCTTCTTTGGGATGGAACACCAGATCATTAATGAAGTCTGAG | + |
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Preference number: 5 (lower is better) Translates to: FQILQVWSSLTLASS*PSLGWNTRSLMKSE Trigger: CTCAGACTTCATTAATGATCTGGTGTTCCATCCCAAAGAAGGCCAGGAGCTCGCAAGCGTGAGTGACGACCACACCTGCAGGATTTGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052355.15 ENSMUST00000169309.3 |
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| CDS GCA 90 bp | TTACAGGAGGCAGCGAGTCAAGTTTGGTCTCTGGGCTCCAGGCAATaGCGTCAACTCGGACTCCATGGTGAAATGTTCGTAGTGTTTTAT | + |
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Preference number: 5 (lower is better) Translates to: LQEAASQVWSLGSRQ*RQLGLHGEMFVVFY Trigger: ATAAAACACTACGAACATTTCACCATGGAGTCCGAGTTGACGGCATTGCCTGGAGCCCAGAGACCAAACTTGACTCGCTGCCTCCTGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052355.15 ENSMUST00000169309.3 |
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| CDS TCA 90 bp | TCGGGATGCCAGCATACACTCATTCCAGGAGAATGCAGAAGAAAATaGGCTGTCTGCTTTCCTTCCAAGTTCCAAATCCTGCAGGTGTGG | + |
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Preference number: 5 (lower is better) Translates to: SGCQHTLIPGECRRK*AVCFPSKFQILQVW Trigger: CCACACCTGCAGGATTTGGAACTTGGAAGGAAAGCAGACAGCTCATTTTCTTCTGCATTCTCCTGGAATGAGTGTATGCTGGCATCCCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052355.15 ENSMUST00000169309.3 |
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| CDS CCA 90 bp | AGTACAAAATTTGATTACAGGAGGCAGCGAGTCAAGTTTGGTCTCTaGGCTCCAGGCAATGCCGTCAACTCGGACTCCATGGTGAAATGT | + |
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Preference number: 5 (lower is better) Translates to: STKFDYRRQRVKFGL*APGNAVNSDSMVKC Trigger: ACATTTCACCATGGAGTCCGAGTTGACGGCATTGCCTGGAGCCCAGAGACCAAACTTGACTCGCTGCCTCCTGTAATCAAATTTTGTACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052355.15 ENSMUST00000169309.3 |
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| CDS-3UTR CAA 90 bp | AGAACAAGAGCTTGTGGTCGCCTCCAACTGCACACAGTGGAAGTGTTCTATGCCCCATGTGAACAGGTCTaGTTTCTTGAGGATAACTGG | + |
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Preference number: 5 (lower is better) Translates to: RTRACGRLQLHTVEVFYAPCEQV*FLEDNW Trigger: CCAGTTATCCTCAAGAAACAAGACCTGTTCACATGG...GGCATAGAACACTTCCACTGTGTGCAGTTGGAGGCGACCACAAGCTCTTGTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219121.2 |
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| CDS-3UTR CAA 90 bp | CATATTTCTGTCACCCAGAACAAGAGCTTGTGGTCGCCTCCAACTGCACACAGTAACAGGTCTTGTTTCTaGAGGATAACTGGACCGAGT | + |
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Preference number: 5 (lower is better) Translates to: HISVTQNKSLWSPPTAHSNRSCF*RITGPS Trigger: ACTCGGTCCAGTTATCCTCAAGAAACAAGACCTGTT...ACTGTGTGCAGTTGGAGGCGACCACAAGCTCTTGTTCTGGGTGACAGAAATATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219121.2 |
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| CDS GCA 90 bp | ACTGAATCCCTTCGATGTCTGTTTCTTCCTCCTGAAACGTACACATaGCAACAACCACATAATTACTGCCGCCATATGCAATCAGGTTTC | + |
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Preference number: 5 (lower is better) Translates to: TESLRCLFLPPETYT*QQPHNYCRHMQSGF Trigger: GAAACCTGATTGCATATGGCGGCAGTAATTATGTGGTTGTTGGCATGTGTACGTTTCAGGAGGAAGAAACAGACATCGAAGGGATTCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052355.15 ENSMUST00000169309.3 |
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| CDS TCA 90 bp | GCCAACAACCACATAATTACTGCCGCCATATGCAATCAGGTTTCCTaGATCTCCACTCTCAAAGGGATTAAATTCTACCACGTGCACATA | + |
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Preference number: 5 (lower is better) Translates to: ANNHIITAAICNQVS*ISTLKGIKFYHVHI Trigger: TATGTGCACGTGGTAGAATTTAATCCCTTTGAGAGTGGAGATTCAGGAAACCTGATTGCATATGGCGGCAGTAATTATGTGGTTGTTGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052355.15 ENSMUST00000169309.3 |
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| CDS CAA 90 bp | CTGCAGGTGTGGTCGTCACTCACGCTTGCGAGCTCCTGGCCTTCTTaGGGATGGAACACCAGATCATTAATGAAGTCTGAGTGGCCCTCC | + |
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Preference number: 6 (lower is better) Translates to: LQVWSSLTLASSWPS*GWNTRSLMKSEWPS Trigger: GGAGGGCCACTCAGACTTCATTAATGATCTGGTGTTCCATCCCAAAGAAGGCCAGGAGCTCGCAAGCGTGAGTGACGACCACACCTGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052355.15 ENSMUST00000169309.3 |
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| CDS CAA 72 bp | AGTTCCAAATCCTGCAGGTGTGGTCGTCACTCACGCTaGCGAGCTCCTGGCCTTCTTTGGGATGGAACACCA | + |
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Preference number: 6 (lower is better) Translates to: SSKSCRCGRHSR*RAPGLLWDGTP Trigger: TGGTGTTCCATCCCAAAGAAGGCCAGGAGCTCGCAAGCGTGAGTGACGACCACACCTGCAGGATTTGGAACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052355.15 ENSMUST00000169309.3 |
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| CDS GCA 72 bp | GCAGCGAGTCAAGTTTGGTCTCTGGGCTCCAGGCAATaGCGTCAACTCGGACTCCATGGTGAAATGTTCGTA | + |
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Preference number: 6 (lower is better) Translates to: AASQVWSLGSRQ*RQLGLHGEMFV Trigger: TACGAACATTTCACCATGGAGTCCGAGTTGACGGCATTGCCTGGAGCCCAGAGACCAAACTTGACTCGCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052355.15 ENSMUST00000169309.3 |
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| CDS CCA 72 bp | TTTGATTACAGGAGGCAGCGAGTCAAGTTTGGTCTCTaGGCTCCAGGCAATGCCGTCAACTCGGACTCCATG | + |
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Preference number: 6 (lower is better) Translates to: FDYRRQRVKFGL*APGNAVNSDSM Trigger: CATGGAGTCCGAGTTGACGGCATTGCCTGGAGCCCAGAGACCAAACTTGACTCGCTGCCTCCTGTAATCAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052355.15 ENSMUST00000169309.3 |
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| CDS CCA 72 bp | CTGCAGGTGTGGTCGTCACTCACGCTTGCGAGCTCCTaGCCTTCTTTGGGATGGAACACCAGATCATTAATG | + |
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Preference number: 6 (lower is better) Translates to: LQVWSSLTLASS*PSLGWNTRSLM Trigger: CATTAATGATCTGGTGTTCCATCCCAAAGAAGGCCAGGAGCTCGCAAGCGTGAGTGACGACCACACCTGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052355.15 ENSMUST00000169309.3 |
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| CDS CAA 90 bp | GCAGCTGAAGTACAAAATTTGATTACAGGAGGCAGCGAGTCAAGTTaGGTCTCTGGGCTCCAGGCAATGCCGTCAACTCGGACTCCATGG | + |
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Preference number: 6 (lower is better) Translates to: AAEVQNLITGGSESS*VSGLQAMPSTRTPW Trigger: CCATGGAGTCCGAGTTGACGGCATTGCCTGGAGCCCAGAGACCAAACTTGACTCGCTGCCTCCTGTAATCAAATTTTGTACTTCAGCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052355.15 ENSMUST00000169309.3 |
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| CDS TCA 72 bp | GCCAGGAAAGACCAGAACCGACAGCTACAGAACCAATaGGGACGGGCTGAGAGTGCCCTAAATGATGAATCT | + |
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Preference number: 6 (lower is better) Translates to: ARKDQNRQLQNQ*GRAESALNDES Trigger: AGATTCATCATTTAGGGCACTCTCAGCCCGTCCTCATTGGTTCTGTAGCTGTCGGTTCTGGTCTTTCCTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052355.15 ENSMUST00000169309.3 |
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| CDS CAA 72 bp | GTACAAAATTTGATTACAGGAGGCAGCGAGTCAAGTTaGGTCTCTGGGCTCCAGGCAATGCCGTCAACTCGG | + |
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Preference number: 6 (lower is better) Translates to: VQNLITGGSESS*VSGLQAMPSTR Trigger: CCGAGTTGACGGCATTGCCTGGAGCCCAGAGACCAAACTTGACTCGCTGCCTCCTGTAATCAAATTTTGTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052355.15 ENSMUST00000169309.3 |
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| CDS CAA 72 bp | TGGTCGTCACTCACGCTTGCGAGCTCCTGGCCTTCTTaGGGATGGAACACCAGATCATTAATGAAGTCTGAG | + |
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Preference number: 6 (lower is better) Translates to: WSSLTLASSWPS*GWNTRSLMKSE Trigger: CTCAGACTTCATTAATGATCTGGTGTTCCATCCCAAAGAAGGCCAGGAGCTCGCAAGCGTGAGTGACGACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052355.15 ENSMUST00000169309.3 |
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| CDS GCA 72 bp | TTCTCTGCAACCATTAGCTTGAAAGTTTCCTCGGGATaGCAGCATACACTCATTCCAGGAGAATGCAGAAGA | + |
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Preference number: 6 (lower is better) Translates to: FSATISLKVSSG*QHTLIPGECRR Trigger: TCTTCTGCATTCTCCTGGAATGAGTGTATGCTGGCATCCCGAGGAAACTTTCAAGCTAATGGTTGCAGAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052355.15 ENSMUST00000169309.3 |
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| CDS GCA 72 bp | GCCCTAAATGATGAATCTGAAACTGACTGGCCATTTTaGCAGGATATCCAGTGGTTGCAAACAAGTTTTCAC | + |
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Preference number: 6 (lower is better) Translates to: ALNDESETDWPF*QDIQWLQTSFH Trigger: GTGAAAACTTGTTTGCAACCACTGGATATCCTGGCAAAATGGCCAGTCAGTTTCAGATTCATCATTTAGGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052355.15 ENSMUST00000169309.3 |
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| CDS CAA 90 bp | AGTGTGCTGACATTAAGGGTGTCTGCTCTGACTGAAGAGATAAAATaGCCTGCTGAGCCATTAGATCATAAAACCGGATTGTTCCATTCT | + |
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Preference number: 6 (lower is better) Translates to: SVLTLRVSALTEEIK*PAEPLDHKTGLFHS Trigger: AGAATGGAACAATCCGGTTTTATGATCTAATGGCTCAGCAGGCAATTTTATCTCTTCAGTCAGAGCAGACACCCTTAATGTCAGCACACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052355.15 ENSMUST00000169309.3 |
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| CDS CAA 72 bp | ACATTAAGGGTGTCTGCTCTGACTGAAGAGATAAAATaGCCTGCTGAGCCATTAGATCATAAAACCGGATTG | + |
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Preference number: 6 (lower is better) Translates to: TLRVSALTEEIK*PAEPLDHKTGL Trigger: CAATCCGGTTTTATGATCTAATGGCTCAGCAGGCAATTTTATCTCTTCAGTCAGAGCAGACACCCTTAATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052355.15 ENSMUST00000169309.3 |
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| CDS CAA 72 bp | AATCTAATCTTCAAATCAGCAGCTGAAGTACAAAATTaGATTACAGGAGGCAGCGAGTCAAGTTTGGTCTCT | + |
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Preference number: 6 (lower is better) Translates to: NLIFKSAAEVQN*ITGGSESSLVS Trigger: AGAGACCAAACTTGACTCGCTGCCTCCTGTAATCAAATTTTGTACTTCAGCTGCTGATTTGAAGATTAGATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052355.15 ENSMUST00000169309.3 |
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