RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NUP205 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000038759

Ensembl transcript IDs: ENSMUST00000043815.16, ENSMUST00000170234.2, ENSMUST00000201374.4

Found 392 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR GCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATACTGAGAGAGCGCTCCTaGCGCGGGGAGGACCCCGGG +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHILRERS*RGEDPG
Trigger: CCCGGGGTCCTCCCCGCGGCAGGAGCGCTCTCTCAG...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000201374.4
CDS-3UTR CCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATAAGGGTCCCCACAGGCTaGCAGCGCCAACAGCGCCGC +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHIRVPTG*QRQQRR
Trigger: GCGGCGCTGTTGGCGCTGCCAGCCTGTGGGGACCCT...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCACAGGTCGGCCAGCTaGGGATACTCCCGCACAGCC +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVHRSAS*GYSRTA
Trigger: GGCTGTGCGGGAGTATCCTCAGCTGGCCGACCTGTG...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATAGGTGAGCAGTCAGGGTaGACACAGCGCCGGCAACCA +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHIGEQSG*TQRRQP
Trigger: TGGTTGCCGGCGCTGTGTTCACCCTGACTGCTCACC...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCGGCCTCTCCAGGTCCTaGGACCAACGGCTGCCTCTG +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVGLSRS*DQRLPL
Trigger: CAGAGGCAGCCGTTGGTCTCAGGACCTGGAGAGGCC...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCGGTGAGCAGTCAGGGTaGACACAGCGCCGGCAACCA +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVGEQSG*TQRRQP
Trigger: TGGTTGCCGGCGCTGTGTTCACCCTGACTGCTCACC...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCATCTTGGAGGAGGACTaGGAGAGCGCTCCTGCCGCG +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVILEED*ESAPAA
Trigger: CGCGGCAGGAGCGCTCTCTCAGTCCTCCTCCAAGAT...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000201374.4
CDS-3UTR GCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCTGCAGCACCTGCCCTaGTGCCTGCAAGTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVLQHLP*CLQVLG
Trigger: TCCCAGCACTTGCAGGCAGCAGGGCAGGTGCTGCAG...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR CCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATAACAGCGCCGCCATCTTaGAGGAGGACTGAGAGAGCG +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHITAPPS*RRTERA
Trigger: CGCTCTCTCAGTCCTCCTCCAAGATGGCGGCGCTGT...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCGGAAGCTTCCAAGGCTaGGAGTCCTGGAGGCGAGAG +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVGSFQG*ESWRRE
Trigger: CTCTCGCCTCCAGGACTCTCAGCCTTGGAAGCTTCC...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATACCAGGTAAGAGCCCATaGCTGTGGGAGTCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHIPGKSP*LWESAE
Trigger: CTCTGCAGACTCCCACAGTCATGGGCTCTTACCTGG...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATACCACGGGAAGGAAGGTaGCGGTACTGGACACTGTCT +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHIPREGR*RYWTLS
Trigger: AGACAGTGTCCAGTACCGTCACCTTCCTTCCCGTGG...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATATCTCCACCAGGGTGCTaGTCAACTGGCAAAAGGCCC +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHISPPGC*STGKRP
Trigger: GGGCCTTTTGCCAGTTGATCAGCACCCTGGTGGAGA...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR GCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATAATGTTGAGGATGGCATaGAGGCACGTCCGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHIMLRMA*RHVRGQ
Trigger: CTGCCCTCGGACGTGCCTGCATGCCATCCTCAACAT...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR GCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATAGAGCTGTCGGTCTTCTaGCTGGATGAGCTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHIELSVF*LDELLR
Trigger: CCTCAGGAGCTCATCCAGGCAGAAGACCGACAGCTC...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR GCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATAACCTGCCCTGCTGCCTaGAAGTGCTGGGACATACTG +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHITCPAA*KCWDIL
Trigger: CAGTATGTCCCAGCACTTGCAGGCAGCAGGGCAGGT...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR GCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCAGCACCTGCCCTGCTaGCTGCAAGTGCTGGGACAT +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVQHLPC*LQVLGH
Trigger: ATGTCCCAGCACTTGCAGGCAGCAGGGCAGGTGCTG...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR CCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCAGGGTCCCCACAGGCTaGCAGCCGAATTTACCGCCA +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVRVPTG*QPNLPP
Trigger: TGGCGGTAAATTCGGCTGCCAGCCTGTGGGGACCCT...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000170234.2
CDS-3UTR CCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATACACACTGAGGCCCATTaGCCAGGCCCTGGAGCATTT +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHIHTEAH*PGPGAF
Trigger: AAATGCTCCAGGGCCTGGCCAATGGGCCTCAGTGTG...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR CCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATAACAACAGGCGTCCACTaGGGATGTTCACAGAGGGCC +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHITTGVH*GCSQRA
Trigger: GGCCCTCTGTGAACATCCCCAGTGGACGCCTGTTGT...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCCAGGTAAGAGCCCATaGCTGTGGGAGTCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVPGKSP*LWESAE
Trigger: CTCTGCAGACTCCCACAGTCATGGGCTCTTACCTGG...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCCACGGGAAGGAAGGTaGCGGTACTGGACACTGTCT +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVPREGR*RYWTLS
Trigger: AGACAGTGTCCAGTACCGTCACCTTCCTTCCCGTGG...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATAGAGCCTCTGTGTATGTaGGCGCTGGCGATTCAGAGA +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHIEPLCM*ALAIQR
Trigger: TCTCTGAATCGCCAGCGCTCACATACACAGAGGCTC...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATAATCAGCAGAGGCCTCTaGCCTATTGCTGCCATACCC +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHIISRGL*PIAAIP
Trigger: GGGTATGGCAGCAATAGGTCAGAGGCCTCTGCTGAT...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATAGCCTGGATGAGCTCCTaGGGACAAGCTGTCAGGATA +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHIAWMSS*GQAVRI
Trigger: TATCCTGACAGCTTGTCCTCAGGAGCTCATCCAGGC...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATAACAGCCTGGCTTAGGTaGGCAGTCAGGGTGAACACA +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHITAWLR*AVRVNT
Trigger: TGTGTTCACCCTGACTGCTCACCTAAGCCAGGCTGT...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATAGACAGACCACTTCCATaGGGGCAGCGCCATAACTCT +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHIDRPLP*GQRHNS
Trigger: AGAGTTATGGCGCTGCCCTCATGGAAGTGGTCTGTC...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR GCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATAATGACTGTGGGAGTCTaGAGAGGCTCTGAGGGACAC +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHIMTVGV*RGSEGH
Trigger: GTGTCCCTCAGAGCCTCTGCAGACTCCCACAGTCAT...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR GCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATACCCAGGAAACAGGACTaGCACCTGCTCCCTGTATGT +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHIPRKQD*HLLPVC
Trigger: ACATACAGGGAGCAGGTGGCAGTCCTGTTTCCTGGG...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR GCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCATGTTGAGGATGGCATaGAGGCACGTCCGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVMLRMA*RHVRGQ
Trigger: CTGCCCTCGGACGTGCCTGCATGCCATCCTCAACAT...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR GCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCGAGCTGTCGGTCTTCTaGCTGGATGAGCTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVELSVF*LDELLR
Trigger: CCTCAGGAGCTCATCCAGGCAGAAGACCGACAGCTC...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR GCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATACCTGCTGCCTGCAAGTaGTGGGACATACTGGATGTG +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHIPAACK*WDILDV
Trigger: CACATCCAGTATGTCCCAGCACTTGCAGGCAGCAGG...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR GCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCACCTGCCCTGCTGCCTaGAAGTGCTGGGACATACTG +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVTCPAA*KCWDIL
Trigger: CAGTATGTCCCAGCACTTGCAGGCAGCAGGGCAGGT...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR GCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCAGAAACTGCAGCACCTaGCCTGCTGCCTGCAAGTGC +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVRNCST*PAACKC
Trigger: GCACTTGCAGGCAGCAGGGCAGGTGCTGCAGTTTCT...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR CCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCGAGGCCAGGGAAATGTaGCTGCTGATGCTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVEAREM*LLMLSS
Trigger: GCTGGAGAGCATCAGCAGCCACATTTCCCTGGCCTC...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043815.16
ENSMUST00000170234.2
ENSMUST00000201374.4
CDS-3UTR CCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCACACTGAGGCCCATTaGCCAGGCCCTGGAGCATTT +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVHTEAH*PGPGAF
Trigger: AAATGCTCCAGGGCCTGGCCAATGGGCCTCAGTGTG...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR CCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATAGACACTGTCTGCACTTaGCAGGTCCTTCCGGAGATG +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHIDTVCT*QVLPEM
Trigger: CATCTCCGGAAGGACCTGCCAAGTGCAGACAGTGTC...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR CCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCACAACAGGCGTCCACTaGGGATGTTCACAGAGGGCC +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVTTGVH*GCSQRA
Trigger: GGCCCTCTGTGAACATCCCCAGTGGACGCCTGTTGT...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR CCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCAGCCTGCCTCTGGCTTaGAACCCTGACTGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVSLPLA*NPDCLQ
Trigger: CTGCAGACAGTCAGGGTTCCAAGCCAGAGGCAGGCT...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR CCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATACCAATAGCCTGCCTCTaGCTTGGAACCCTGACTGTC +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHIPIACL*LGTLTV
Trigger: GACAGTCAGGGTTCCAAGCCAGAGGCAGGCTATTGG...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR CCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATAGCACAGCTGGAGAGCTaGAAGGAGAATCTGCCGGTA +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHIAQLES*KENLPV
Trigger: TACCGGCAGATTCTCCTTCCAGCTCTCCAGCTGTGC...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR CCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATAGATGTGAGGATGACCTaGCACAGCTGGAGAGCTGGA +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHIDVRMT*HSWRAG
Trigger: TCCAGCTCTCCAGCTGTGCCAGGTCATCCTCACATC...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATATCTGGCTTGGAACCCTaGCTGTCTGCAGTATCTGTG +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHISGLEP*LSAVSV
Trigger: CACAGATACTGCAGACAGTCAGGGTTCCAAGCCAGA...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATACAGATTAGAAGGGAATaGGCTCTCCACCAGGGTGCT +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHIQIRRE*ALHQGA
Trigger: AGCACCCTGGTGGAGAGCTCATTCCCTTCTAATCTG...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATACTTCTTCCAGTAAACTaGGGGCAAGCTCCAGCATGG +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHILLPVN*GQAPAW
Trigger: CCATGCTGGAGCTTGCCCTCAGTTTACTGGAAGAAG...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCACGATGAGAGCCAGCTaGCTCTCTCTCAGAAGGTCC +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVTMRAS*LSLRRS
Trigger: GGACCTTCTGAGAGAGAGTCAGCTGGCTCTCATCGT...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCCTTCTCCAGAATGTTaGGGATGGCATGCAGGCACG +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVPSPEC*GWHAGT
Trigger: CGTGCCTGCATGCCATCCTCAACATTCTGGAGAAGG...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCGAGCCTCTGTGTATGTaGGCGCTGGCGATTCAGAGA +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVEPLCM*ALAIQR
Trigger: TCTCTGAATCGCCAGCGCTCACATACACAGAGGCTC...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATAGGCTCAGGGATCTCCTaGCTGAAGTCAATCGAGTCA +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHIGSGIS*LKSIES
Trigger: TGACTCGATTGACTTCAGTCAGGAGATCCCTGAGCC...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCATCAGCAGAGGCCTCTaGCCTATTGCTGCCATACCC +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVISRGL*PIAAIP
Trigger: GGGTATGGCAGCAATAGGTCAGAGGCCTCTGCTGAT...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCGCCTGGATGAGCTCCTaGGGACAAGCTGTCAGGATA +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVAWMSS*GQAVRI
Trigger: TATCCTGACAGCTTGTCCTCAGGAGCTCATCCAGGC...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCACAGCCTGGCTTAGGTaGGCAGTCAGGGTGAACACA +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVTAWLR*AVRVNT
Trigger: TGTGTTCACCCTGACTGCTCACCTAAGCCAGGCTGT...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATAAGGTACAAGAGCCACTaGTGCTGCTTGTCCACAGAG +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHIRYKSH*CCLSTE
Trigger: CTCTGTGGACAAGCAGCATCAGTGGCTCTTGTACCT...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATAATGCCAAACATGCCATaGGAGTCCATTTCTGGGCGC +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHIMPNMP*ESISGR
Trigger: GCGCCCAGAAATGGACTCTCATGGCATGTTTGGCAT...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR GCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATAAGCCTAACAGTGGCCTaGAGTCCAGGAAGCTTCCAA +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHISLTVA*SPGSFQ
Trigger: TTGGAAGCTTCCTGGACTGCAGGCCACTGTTAGGCT...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR GCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCGTACTGGACACTGTCTaGACTTGGCAGGTCCTTCCG +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVVLDTV*TWQVLP
Trigger: CGGAAGGACCTGCCAAGTGCAGACAGTGTCCAGTAC...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR GCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCGGAGGAATACTGCACTaGAGGAGCCCCAGAATCACC +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVGGILH*RSPRIT
Trigger: GGTGATTCTGGGGCTCCTGCAGTGCAGTATTCCTCC...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR GCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCCTGCTGCCTGCAAGTaGTGGGACATACTGGATGTG +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVPAACK*WDILDV
Trigger: CACATCCAGTATGTCCCAGCACTTGCAGGCAGCAGG...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR GCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATATGTGAAACAAGAAACTaGAGCACCTGCCCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHICETRN*STCPAA
Trigger: GGCAGCAGGGCAGGTGCTGCAGTTTCTTGTTTCACA...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR CCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATAGCTCAGGAAGAAGTCTaGTTCCTTGTTGCCCCTGGA +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHIAQEEV*FLVAPG
Trigger: TCCAGGGGCAACAAGGAACCAGACTTCTTCCTGAGC...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043815.16
ENSMUST00000170234.2
ENSMUST00000201374.4
CDS-3UTR CCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCGACACTGTCTGCACTTaGCAGGTCCTTCCGGAGATG +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVDTVCT*QVLPEM
Trigger: CATCTCCGGAAGGACCTGCCAAGTGCAGACAGTGTC...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR CCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCCAATAGCCTGCCTCTaGCTTGGAACCCTGACTGTC +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVPIACL*LGTLTV
Trigger: GACAGTCAGGGTTCCAAGCCAGAGGCAGGCTATTGG...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR CCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCGCTGCCTGCAAGTGCTaGGACATACTGGATGTGAGG +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVAACKC*DILDVR
Trigger: CCTCACATCCAGTATGTCCCAGCACTTGCAGGCAGC...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATACTTCATCTGCTTCTGTaGACTCAGCCAGGGCTGTTA +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHILHLLL*TQPGLL
Trigger: TAACAGCCCTGGCTGAGTTCACAGAAGCAGATGAAG...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATAGCACAACAGCCTCGCTaGGGAACAGGAAGACATTAT +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHIAQQPR*GTGRHY
Trigger: ATAATGTCTTCCTGTTCCTCAGCGAGGCTGTTGTGC...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATACAACGACTGCCAAAGTaGAGCGGCAATTTCAGGAGA +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHIQRLPK*SGNFRR
Trigger: TCTCCTGAAATTGCCGCTTCACTTTGGCAGTCGTTG...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCTCTGGCTTGGAACCCTaGCTGTCTGCAGTATCTGTG +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVSGLEP*LSAVSV
Trigger: CACAGATACTGCAGACAGTCAGGGTTCCAAGCCAGA...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCTTCTTCCAGTAAACTaGGGGCAAGCTCCAGCATGG +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVLLPVN*GQAPAW
Trigger: CCATGCTGGAGCTTGCCCTCAGTTTACTGGAAGAAG...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATACAGGGATCTCCTGACTaGAGTCAATCGAGTCAAGGA +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHIQGSPD*SQSSQG
Trigger: TCCTTGACTCGATTGACTTCAGTCAGGAGATCCCTG...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCGGCTCAGGGATCTCCTaGCTGAAGTCAATCGAGTCA +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVGSGIS*LKSIES
Trigger: TGACTCGATTGACTTCAGTCAGGAGATCCCTGAGCC...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATAGCTCACAGTTGGCAATaGCTTGCTCAATCTGAGCAC +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHIAHSWQ*LAQSEH
Trigger: GTGCTCAGATTGAGCAAGTCATTGCCAACTGTGAGC...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCTCTCAGGAGCTCTGCTaGACCTTGCTGTTCCTTAGC +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVSQELC*TLLFLS
Trigger: GCTAAGGAACAGCAAGGTTCAGCAGAGCTCCTGAGA...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATAACAGGCAGGTCTCGATaGTATAGGAACAGAGGGACA +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHITGRSR*YRNRGT
Trigger: TGTCCCTCTGTTCCTATATCATCGAGACCTGCCTGT...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR GCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATACTTTCAGCCAGAGACTaGCTGCACTCCTTGATGAGA +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHILSARD*LHSLMR
Trigger: TCTCATCAAGGAGTGCAGGCAGTCTCTGGCTGAAAG...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043815.16
ENSMUST00000170234.2
ENSMUST00000201374.4
CDS-3UTR GCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCAGCCTAACAGTGGCCTaGAGTCCAGGAAGCTTCCAA +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVSLTVA*SPGSFQ
Trigger: TTGGAAGCTTCCTGGACTGCAGGCCACTGTTAGGCT...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR GCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATATCAATACCAATAGCCTaGCTCTGGCTTGGAACCCTG +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHISIPIA*LWLGTL
Trigger: CAGGGTTCCAAGCCAGAGGCAGGCTATTGGTATTGA...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR GCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCAGGCCTCTGACCTATTaGTGCCATACCCTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVRPLTY*CHTLKS
Trigger: GCTCTTCAGGGTATGGCAGCAATAGGTCAGAGGCCT...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR CCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCGCTCAGGAAGAAGTCTaGTTCCTTGTTGCCCCTGGA +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVAQEEV*FLVAPG
Trigger: TCCAGGGGCAACAAGGAACCAGACTTCTTCCTGAGC...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000043815.16
ENSMUST00000170234.2
ENSMUST00000201374.4
CDS-3UTR CCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCAGCATGAAAGCATACTaGGCCTCTCCAGGTCCTGAG +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVSMKAY*ASPGPE
Trigger: CTCAGGACCTGGAGAGGCCCAGTATGCTTTCATGCT...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCTTCATCTGCTTCTGTaGACTCAGCCAGGGCTGTTA +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVLHLLL*TQPGLL
Trigger: TAACAGCCCTGGCTGAGTTCACAGAAGCAGATGAAG...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCGCACAACAGCCTCGCTaGGGAACAGGAAGACATTAT +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVAQQPR*GTGRHY
Trigger: ATAATGTCTTCCTGTTCCTCAGCGAGGCTGTTGTGC...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATATCAGTAGCTCAGCTTTaGGAACTGGAGGAATACTGC +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHISVAQL*ELEEYC
Trigger: GCAGTATTCCTCCAGTTCTCAAAGCTGAGCTACTGA...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCAACGACTGCCAAAGTaGAGCGGCAATTTCAGGAGA +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVQRLPK*SGNFRR
Trigger: TCTCCTGAAATTGCCGCTTCACTTTGGCAGTCGTTG...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCAGGGATCTCCTGACTaGAGTCAATCGAGTCAAGGA +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVQGSPD*SQSSQG
Trigger: TCCTTGACTCGATTGACTTCAGTCAGGAGATCCCTG...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCGCTCACAGTTGGCAATaGCTTGCTCAATCTGAGCAC +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVAHSWQ*LAQSEH
Trigger: GTGCTCAGATTGAGCAAGTCATTGCCAACTGTGAGC...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATAATTGCTGCCATACCCTaGAGAGCATTGACTTCAGCT +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHIIAAIP*RALTSA
Trigger: AGCTGAAGTCAATGCTCTTCAGGGTATGGCAGCAAT...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATATTTCATCTTTCTTGCTaGCCCTATCTCCCTCCGCAT +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHIFHLSC*PYLPPH
Trigger: ATGCGGAGGGAGATAGGGTCAGCAAGAAAGATGAAA...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCACAGGCAGGTCTCGATaGTATAGGAACAGAGGGACA +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVTGRSR*YRNRGT
Trigger: TGTCCCTCTGTTCCTATATCATCGAGACCTGCCTGT...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATATCGTGCTGGTTCACTTaGGATAGTCCACTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHISCWFT*DSPLLK
Trigger: CTTCAGAAGTGGACTATCTCAAGTGAACCAGCACGA...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR GCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATAGATCAGAAACCTCTTTaGGGTGTTTCTCACTGCCCA +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHIDQKPL*GVSHCP
Trigger: TGGGCAGTGAGAAACACCGCAAAGAGGTTTCTGATC...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043815.16
ENSMUST00000170234.2
ENSMUST00000201374.4
CDS-3UTR GCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCTTTCAGCCAGAGACTaGCTGCACTCCTTGATGAGA +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVLSARD*LHSLMR
Trigger: TCTCATCAAGGAGTGCAGGCAGTCTCTGGCTGAAAG...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043815.16
ENSMUST00000170234.2
ENSMUST00000201374.4
CDS-3UTR GCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATAGGCCAGCTCTGCAATTaGTTCATCTGCTTCTGTGAA +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHIGQLCN*FICFCE
Trigger: TTCACAGAAGCAGATGAAGCAATTGCAGAGCTGGCC...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR GCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATAAGCAATGGCCAGCTCTaGAATTGCTTCATCTGCTTC +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHISNGQL*NCFICF
Trigger: GAAGCAGATGAAGCAATTGCAGAGCTGGCCATTGCT...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR GCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCGCAATCAGTCCATCTTaGTCCTTCTGGGTGATGCCA +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVAISPS*SFWVMP
Trigger: TGGCATCACCCAGAAGGAGCAAGATGGACTGATTGC...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR GCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATAGGAACCCTGACTGTCTaGAGTATCTGTGTGTATTCC +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHIGTLTV*SICVYS
Trigger: GGAATACACACAGATACTGCAGACAGTCAGGGTTCC...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR GCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATACTCGGATTAATTCCCTaGAAGAGCTGTTCCAATGGC +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHILGLIP*KSCSNG
Trigger: GCCATTGGAACAGCTCTTGCAGGGAATTAATCCGAG...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR GCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATATCATCCAGTAAGAGGTaGAGGAGCCTCTGTGTATGT +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHISSSKR*RSLCVC
Trigger: ACATACACAGAGGCTCCTGCACCTCTTACTGGATGA...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR GCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATACCTCTGACCTATTGCTaGCATACCCTGAAGAGCATT +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHIPLTYC*HTLKSI
Trigger: AATGCTCTTCAGGGTATGGCAGCAATAGGTCAGAGG...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR GCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCTTTAAGAGAGGAGGCTaGGGAGTCAGCAAGCTCTGT +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVFKRGG*GVSKLC
Trigger: ACAGAGCTTGCTGACTCCGCAGCCTCCTCTCTTAAA...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR GCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATACTGACAGCGCAGGATTaGTTGGATGGTATCAGAATG +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHILTAQD*LDGIRM
Trigger: CATTCTGATACCATCCAAGCAATCCTGCGCTGTCAG...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR CCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATATTGGGTAATGGTGACTaGCAAGCCCAGGCAAAAAGA +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHILGNGD*QAQAKR
Trigger: TCTTTTTGCCTGGGCTTGCCAGTCACCATTACCCAA...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000043815.16
ENSMUST00000170234.2
ENSMUST00000201374.4
CDS-3UTR CCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATACTCAGCTTTGAGAACTaGAGGAATACTGCACTGCAG +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHILSFEN*RNTALQ
Trigger: CTGCAGTGCAGTATTCCTCCAGTTCTCAAAGCTGAG...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR CCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATATGTGTATGTGAGCGCTaGCGATTCAGAGATGTCACT +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHICVCER*RFRDVT
Trigger: AGTGACATCTCTGAATCGCCAGCGCTCACATACACA...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR CCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATACGTTGGGATGAATACTaGTGGGTCTCTCATGCCAAA +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHIRWDEY*WVSHAK
Trigger: TTTGGCATGAGAGACCCACCAGTATTCATCCCAACG...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR CCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCACATAGCAGCACTCTaGAGGTTAGAGGAGTTCTGC +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVHIAAL*RLEEFC
Trigger: GCAGAACTCCTCTAACCTCCAGAGTGCTGCTATGTG...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATAACTGTATCAGGGTTCTaGGAGAATTTGCAATGCACC +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHITVSGF*ENLQCT
Trigger: GGTGCATTGCAAATTCTCTCAGAACCCTGATACAGT...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043815.16
ENSMUST00000170234.2
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATAAAACCAGCTCTGGACTaGGTTCTAATGTCCATGTCT +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHIKPALD*VLMSMS
Trigger: AGACATGGACATTAGAACTCAGTCCAGAGCTGGTTT...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043815.16
ENSMUST00000170234.2
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATATTGTCTAACAAACTTTaGCAAGACAACCTGGCGCTG +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHILSNKL*QDNLAL
Trigger: CAGCGCCAGGTTGTCTTGTCAAAGTTTGTTAGACAA...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCTCAGTAGCTCAGCTTTaGGAACTGGAGGAATACTGC +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVSVAQL*ELEEYC
Trigger: GCAGTATTCCTCCAGTTCTCAAAGCTGAGCTACTGA...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATAGACTCGTTCAGAAGGTaGTACATCAGACTAAAGCCA +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHIDSFRR*YIRLKP
Trigger: TGGCTTTAGTCTGATGTATCACCTTCTGAACGAGTC...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATATGTCTTCATAAGCCATaGCATCTGACTCAGCATGGA +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHICLHKP*HLTQHG
Trigger: TCCATGCTGAGTCAGATGTCATGGCTTATGAAGACA...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCATTGCTGCCATACCCTaGAGAGCATTGACTTCAGCT +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVIAAIP*RALTSA
Trigger: AGCTGAAGTCAATGCTCTTCAGGGTATGGCAGCAAT...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATAAAGAACTATCAAGCATaGAAGCATACTGGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHIKNYQA*KHTGPL
Trigger: GAGAGGCCCAGTATGCTTTCATGCTTGATAGTTCTT...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCGCGCTGCTTTACTTATaGTTCCTGTCAGCAGAGCTA +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVALLYL*FLSAEL
Trigger: TAGCTCTGCTGACAGGAATCATAAGTAAAGCAGCGC...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCTTTCATCTTTCTTGCTaGCCCTATCTCCCTCCGCAT +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVFHLSC*PYLPPH
Trigger: ATGCGGAGGGAGATAGGGTCAGCAAGAAAGATGAAA...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCTCGTGCTGGTTCACTTaGGATAGTCCACTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVSCWFT*DSPLLK
Trigger: CTTCAGAAGTGGACTATCTCAAGTGAACCAGCACGA...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCGCGGGATCGAACTTTTaGGTACAACCCTTCAATGTC +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVAGSNF*VQPFNV
Trigger: GACATTGAAGGGTTGTACTCAAAAGTTCGATCCCGC...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR GCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCGATCAGAAACCTCTTTaGGGTGTTTCTCACTGCCCA +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVDQKPL*GVSHCP
Trigger: TGGGCAGTGAGAAACACCGCAAAGAGGTTTCTGATC...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043815.16
ENSMUST00000170234.2
ENSMUST00000201374.4
CDS-3UTR GCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCGGCCAGCTCTGCAATTaGTTCATCTGCTTCTGTGAA +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVGQLCN*FICFCE
Trigger: TTCACAGAAGCAGATGAAGCAATTGCAGAGCTGGCC...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR GCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATATCGAGCATCTTCATCTaGCCGATTCTTCAGCTGTTT +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHISSIFI*PILQLF
Trigger: AAACAGCTGAAGAATCGGGCAGATGAAGATGCTCGA...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR GCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATAGTGTATTCCAACGACTaGCAAAGTGAAGCGGCAATT +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHIVYSND*QSEAAI
Trigger: AATTGCCGCTTCACTTTGGCAGTCGTTGGAATACAC...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR GCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCGGAACCCTGACTGTCTaGAGTATCTGTGTGTATTCC +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVGTLTV*SICVYS
Trigger: GGAATACACACAGATACTGCAGACAGTCAGGGTTCC...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR GCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCACATTGCAGACCGTCTaGCCCTGTAAATTCTTGTGC +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVTLQTV*PCKFLC
Trigger: GCACAAGAATTTACAGGGGCAGACGGTCTGCAATGT...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR GCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCCTCTGACCTATTGCTaGCATACCCTGAAGAGCATT +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVPLTYC*HTLKSI
Trigger: AATGCTCTTCAGGGTATGGCAGCAATAGGTCAGAGG...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR GCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATAATAATTTCTACCAGCTaGCTCCAGGACTCTAGAGCA +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHIIISTS*LQDSRA
Trigger: TGCTCTAGAGTCCTGGAGGCAGCTGGTAGAAATTAT...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR GCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCTGACAGCGCAGGATTaGTTGGATGGTATCAGAATG +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVLTAQD*LDGIRM
Trigger: CATTCTGATACCATCCAAGCAATCCTGCGCTGTCAG...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR GCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATATCAAGAAGTTTCTTTTaGAGCGACTCTCCGAAAGCG +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHISRSFF*SDSPKA
Trigger: CGCTTTCGGAGAGTCGCTGCAAAAGAAACTTCTTGA...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR CCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATAATCATGTCAAGAAGGTaGACAGCTTCAGGCTGTCTT +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHIIMSRR*TASGCL
Trigger: AAGACAGCCTGAAGCTGTCCACCTTCTTGACATGAT...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043815.16
ENSMUST00000170234.2
ENSMUST00000201374.4
CDS-3UTR CCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCTCAGCTTTGAGAACTaGAGGAATACTGCACTGCAG +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVLSFEN*RNTALQ
Trigger: CTGCAGTGCAGTATTCCTCCAGTTCTCAAAGCTGAG...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR CCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCGGTAGAGAGCAAGATTaGGTGGATTGCGTTCTAGAG +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVGREQD*VDCVLE
Trigger: CTCTAGAACGCAATCCACCCAATCTTGCTCTCTACC...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR CCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCTGTGTATGTGAGCGCTaGCGATTCAGAGATGTCACT +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVCVCER*RFRDVT
Trigger: AGTGACATCTCTGAATCGCCAGCGCTCACATACACA...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR CCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATATGGGATGAATACTGGTaGGTCTCTCATGCCAAACAT +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHIWDEYW*VSHAKH
Trigger: ATGTTTGGCATGAGAGACCCACCAGTATTCATCCCA...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR CCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCGTTGGGATGAATACTaGTGGGTCTCTCATGCCAAA +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVRWDEY*WVSHAK
Trigger: TTTGGCATGAGAGACCCACCAGTATTCATCCCAACG...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR CCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATACAGCGCAGGATTGCTTaGATGGTATCAGAATGTGAA +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHIQRRIA*MVSECE
Trigger: TTCACATTCTGATACCATCCAAGCAATCCTGCGCTG...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATATGGGTTTTTGAACAGTaGAATGAAGTCGGGTTTGTG +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHIWVFEQ*NEVGFV
Trigger: CACAAACCCGACTTCATTTCACTGTTCAAAAACCCA...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000043815.16
ENSMUST00000170234.2
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATAGAGAAGCTCAACAGCTaGCAATTCCCCAATATCAAA +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHIEKLNS*QFPNIK
Trigger: TTTGATATTGGGGAATTGTCAGCTGTTGAGCTTCTC...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043815.16
ENSMUST00000170234.2
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCAAACCAGCTCTGGACTaGGTTCTAATGTCCATGTCT +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVKPALD*VLMSMS
Trigger: AGACATGGACATTAGAACTCAGTCCAGAGCTGGTTT...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043815.16
ENSMUST00000170234.2
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCTTGTCTAACAAACTTTaGCAAGACAACCTGGCGCTG +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVLSNKL*QDNLAL
Trigger: CAGCGCCAGGTTGTCTTGTCAAAGTTTGTTAGACAA...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCGACTCGTTCAGAAGGTaGTACATCAGACTAAAGCCA +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVDSFRR*YIRLKP
Trigger: TGGCTTTAGTCTGATGTATCACCTTCTGAACGAGTC...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCTCTCAGAAGGTCCATaGAAAGGTTCTCCTTTTGCA +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVLSEGP*KGSPFA
Trigger: TGCAAAAGGAGAACCTTTTCATGGACCTTCTGAGAG...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATAATAAGCCATGACATCTaGCTCAGCATGGAGATTTCA +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHIISHDI*LSMEIS
Trigger: TGAAATCTCCATGCTGAGTCAGATGTCATGGCTTAT...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCTGTCTTCATAAGCCATaGCATCTGACTCAGCATGGA +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVCLHKP*HLTQHG
Trigger: TCCATGCTGAGTCAGATGTCATGGCTTATGAAGACA...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCGAGATAGTCCACTTCTaGAGTCCAGATTGGGTTCTT +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVEIVHF*SPDWVL
Trigger: AAGAACCCAATCTGGACTTCAGAAGTGGACTATCTC...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR GCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATAGCTTCTTTAATGAGCTaGTCAGGAAGAAGTCTGGTT +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHIASLMS*SGRSLV
Trigger: AACCAGACTTCTTCCTGAGCAGCTCATTAAAGAAGC...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043815.16
ENSMUST00000170234.2
ENSMUST00000201374.4
CDS-3UTR GCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCGGTTCTGAGAGAATTTaGAATGCACCGCTTTCCATC +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVGSERI*NAPLSI
Trigger: GATGGAAAGCGGTGCATTGCAAATTCTCTCAGAACC...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043815.16
ENSMUST00000170234.2
ENSMUST00000201374.4
CDS-3UTR GCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCGTGTATTCCAACGACTaGCAAAGTGAAGCGGCAATT +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVVYSND*QSEAAI
Trigger: AATTGCCGCTTCACTTTGGCAGTCGTTGGAATACAC...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR GCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATACAGGCAATGCTGAACTaGTTTTTCCAGGTGTTTCTT +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHIQAMLN*FFQVFL
Trigger: AAGAAACACCTGGAAAAAGCAGTTCAGCATTGCCTG...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR GCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATACCCTGTAAATTCTTGTaGTCACAGTTGGCAATGACT +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHIPCKFL*SQLAMT
Trigger: AGTCATTGCCAACTGTGAGCACAAGAATTTACAGGG...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR CCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCATCATGTCAAGAAGGTaGACAGCTTCAGGCTGTCTT +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVIMSRR*TASGCL
Trigger: AAGACAGCCTGAAGCTGTCCACCTTCTTGACATGAT...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043815.16
ENSMUST00000170234.2
ENSMUST00000201374.4
CDS-3UTR CCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATACGTTCCTCTGTGCTTTaGTCTATAAAGCTGGTATCA +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHIRSSVL*SIKLVS
Trigger: TGATACCAGCTTTATAGACCAAAGCACAGAGGAACG...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043815.16
ENSMUST00000170234.2
ENSMUST00000201374.4
CDS-3UTR CCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATATCTCTCTGTCAACAGTaGAAGGTGGTGAATCATATC +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHISLCQQ*KVVNHI
Trigger: GATATGATTCACCACCTTCCACTGTTGACAGAGAGA...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043815.16
ENSMUST00000170234.2
ENSMUST00000201374.4
CDS-3UTR CCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATAAGACATTATCAGCAATaGCCAGCTCTGCAATTGCTT +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHIRHYQQ*PALQLL
Trigger: AAGCAATTGCAGAGCTGGCCATTGCTGATAATGTCT...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR CCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATACAGACTAAAGCCAGGTaGCTTATAGGCTATGATTTC +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHIQTKAR*LIGYDF
Trigger: GAAATCATAGCCTATAAGCCACCTGGCTTTAGTCTG...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR CCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATATTCGACGCACTTTTGTaGCAGTGTCAAAATGAAGGA +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHIFDALL*QCQNEG
Trigger: TCCTTCATTTTGACACTGCCACAAAAGTGCGTCGAA...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR CCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCTGGGATGAATACTGGTaGGTCTCTCATGCCAAACAT +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVWDEYW*VSHAKH
Trigger: ATGTTTGGCATGAGAGACCCACCAGTATTCATCCCA...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR CCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCAGCGCAGGATTGCTTaGATGGTATCAGAATGTGAA +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVQRRIA*MVSECE
Trigger: TTCACATTCTGATACCATCCAAGCAATCCTGCGCTG...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR CCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATAGCAAACAATGAATCTTaGGAATCCATTGGCGTGCAA +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHIANNES*ESIGVQ
Trigger: TTGCACGCCAATGGATTCCCAAGATTCATTGTTTGC...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCTGGGTTTTTGAACAGTaGAATGAAGTCGGGTTTGTG +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVWVFEQ*NEVGFV
Trigger: CACAAACCCGACTTCATTTCACTGTTCAAAAACCCA...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000043815.16
ENSMUST00000170234.2
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATAAATCGCCAACCATTTTaGCCTGAATGTTGGAATTAC +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHINRQPF*PECWNY
Trigger: GTAATTCCAACATTCAGGTCAAAATGGTTGGCGATT...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATAGTAGATTGGTGGTACTaGTGGGTTTCTTTAACTCAA +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHIVDWWY*WVSLTQ
Trigger: TTGAGTTAAAGAAACCCATCAGTACCACCAATCTAC...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCATAAGCCATGACATCTaGCTCAGCATGGAGATTTCA +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVISHDI*LSMEIS
Trigger: TGAAATCTCCATGCTGAGTCAGATGTCATGGCTTAT...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATACTTCCTACAACATACTaGAGAATAGTGCTGATTTCC +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHILPTTY*RIVLIS
Trigger: GGAAATCAGCACTATTCTTCAGTATGTTGTAGGAAG...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATAACAGTTTCTTCAGTATaGTGTGAAGCGAAGAATCTC +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHITVSSV*CEAKNL
Trigger: GAGATTCTTCGCTTCACATCATACTGAAGAAACTGT...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCGATGGTATCAGAATGTaGAACAAGAAACTGCAGCAC +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVDGIRM*NKKLQH
Trigger: GTGCTGCAGTTTCTTGTTTCACATTCTGATACCATC...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR GCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCGCTTCTTTAATGAGCTaGTCAGGAAGAAGTCTGGTT +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVASLMS*SGRSLV
Trigger: AACCAGACTTCTTCCTGAGCAGCTCATTAAAGAAGC...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043815.16
ENSMUST00000170234.2
ENSMUST00000201374.4
CDS-3UTR GCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCAGGCAATGCTGAACTaGTTTTTCCAGGTGTTTCTT +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVQAMLN*FFQVFL
Trigger: AAGAAACACCTGGAAAAAGCAGTTCAGCATTGCCTG...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR GCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATAAGCATGGAGATTTCATaGTCTTTGTTGGAGAAAGGT +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHISMEIS*SLLEKG
Trigger: ACCTTTCTCCAACAAAGAGCATGAAATCTCCATGCT...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR GCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATACAATCGAGTCAAGGATaGTTAGAATTTTTCGACGCA +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHIQSSQG*LEFFDA
Trigger: TGCGTCGAAAAATTCTAAGCATCCTTGACTCGATTG...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR GCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCCCTGTAAATTCTTGTaGTCACAGTTGGCAATGACT +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVPCKFL*SQLAMT
Trigger: AGTCATTGCCAACTGTGAGCACAAGAATTTACAGGG...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR CCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATACAACACCCTCTGAACTaGCTTTCTGAATTTTCTCAT +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHIQHPLN*LSEFSH
Trigger: ATGAGAAAATTCAGAAAGCCAGTTCAGAGGGTGTTG...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043815.16
ENSMUST00000170234.2
ENSMUST00000201374.4
CDS-3UTR CCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCGTTCCTCTGTGCTTTaGTCTATAAAGCTGGTATCA +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVRSSVL*SIKLVS
Trigger: TGATACCAGCTTTATAGACCAAAGCACAGAGGAACG...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043815.16
ENSMUST00000170234.2
ENSMUST00000201374.4
CDS-3UTR CCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCTCTCTCTGTCAACAGTaGAAGGTGGTGAATCATATC +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVSLCQQ*KVVNHI
Trigger: GATATGATTCACCACCTTCCACTGTTGACAGAGAGA...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043815.16
ENSMUST00000170234.2
ENSMUST00000201374.4
CDS-3UTR CCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCAGACATTATCAGCAATaGCCAGCTCTGCAATTGCTT +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVRHYQQ*PALQLL
Trigger: AAGCAATTGCAGAGCTGGCCATTGCTGATAATGTCT...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR CCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCAGACTAAAGCCAGGTaGCTTATAGGCTATGATTTC +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVQTKAR*LIGYDF
Trigger: GAAATCATAGCCTATAAGCCACCTGGCTTTAGTCTG...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR CCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATAGAAAATAAGAAATCCTaGCTGGTTCTCAAGTACCTC +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHIENKKS*LVLKYL
Trigger: GAGGTACTTGAGAACCAGCCAGGATTTCTTATTTTC...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR CCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCTTCGACGCACTTTTGTaGCAGTGTCAAAATGAAGGA +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVFDALL*QCQNEG
Trigger: TCCTTCATTTTGACACTGCCACAAAAGTGCGTCGAA...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR CCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCATGAGAGTCCATTTCTaGGCGCATATCATAGACTTG +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVMRVHF*AHIIDL
Trigger: CAAGTCTATGATATGCGCCCAGAAATGGACTCTCAT...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATAATTTTCTCATGCTGTTaGACATTTTTGGGTGGGTTT +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHIIFSCC*TFLGGF
Trigger: AAACCCACCCAAAAATGTTCAACAGCATGAGAAAAT...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000043815.16
ENSMUST00000170234.2
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATAATTCACATCAATCTGTaGCAGCAAAGTAAGGACTTT +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHIIHINL*QQSKDF
Trigger: AAAGTCCTTACTTTGCTGTCACAGATTGATGTGAAT...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043815.16
ENSMUST00000170234.2
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCGGGACTCTATTTCATTaGGTTCAACCTCAATACCAA +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVGTLFH*VQPQYQ
Trigger: TTGGTATTGAGGTTGAACTCAATGAAATAGAGTCCC...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCGTGGCTTATAGGCTATaGTTTCTTCTCCTTGTAGTT +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVVAYRL*FLLLVV
Trigger: AACTACAAGGAGAAGAAATCATAGCCTATAAGCCAC...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCCAACCATTTTGACCTaGATGTTGGAATTACAAGAG +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVPTILT*MLELQE
Trigger: CTCTTGTAATTCCAACATTCAGGTCAAAATGGTTGG...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCAATCGCCAACCATTTTaGCCTGAATGTTGGAATTAC +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVNRQPF*PECWNY
Trigger: GTAATTCCAACATTCAGGTCAAAATGGTTGGCGATT...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCGTAGATTGGTGGTACTaGTGGGTTTCTTTAACTCAA +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVVDWWY*WVSLTQ
Trigger: TTGAGTTAAAGAAACCCATCAGTACCACCAATCTAC...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCTTCCTACAACATACTaGAGAATAGTGCTGATTTCC +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVLPTTY*RIVLIS
Trigger: GGAAATCAGCACTATTCTTCAGTATGTTGTAGGAAG...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCTTCTTCAGTATGATGTaGAGCGAAGAATCTCCGATA +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVFFSMM*SEESPI
Trigger: TATCGGAGATTCTTCGCTTCACATCATACTGAAGAA...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATATCCGCATTATTATCTTaGAATTTAAACTGCCGCAGT +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHISALLS*NLNCRS
Trigger: ACTGCGGCAGTTTAAATTTCAAGATAATAATGCGGA...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR GCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATAGTCACTGATGATAAATaGTTCTTTAATGAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHIVTDDK*FFNELL
Trigger: GAGCAGCTCATTAAAGAAGCATTTATCATCAGTGAC...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043815.16
ENSMUST00000170234.2
ENSMUST00000201374.4
CDS-3UTR GCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCAGCATGGAGATTTCATaGTCTTTGTTGGAGAAAGGT +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVSMEIS*SLLEKG
Trigger: ACCTTTCTCCAACAAAGAGCATGAAATCTCCATGCT...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR GCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCAATCGAGTCAAGGATaGTTAGAATTTTTCGACGCA +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVQSSQG*LEFFDA
Trigger: TGCGTCGAAAAATTCTAAGCATCCTTGACTCGATTG...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR CCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCAACACCCTCTGAACTaGCTTTCTGAATTTTCTCAT +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVQHPLN*LSEFSH
Trigger: ATGAGAAAATTCAGAAAGCCAGTTCAGAGGGTGTTG...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000043815.16
ENSMUST00000170234.2
ENSMUST00000201374.4
CDS-3UTR CCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATACTGTTTCACTTTCATTaGCATAAATGCAAGGAAGTC +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHILFHFH*HKCKEV
Trigger: GACTTCCTTGCATTTATGCCAATGAAAGTGAAACAG...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR CCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCAGGAATATAAATAGTTaGAGGCAACAGGTCACCCAT +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVRNINS*RQQVTH
Trigger: ATGGGTGACCTGTTGCCTCCAACTATTTATATTCCT...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR CCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCGAAAATAAGAAATCCTaGCTGGTTCTCAAGTACCTC +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVENKKS*LVLKYL
Trigger: GAGGTACTTGAGAACCAGCCAGGATTTCTTATTTTC...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR CCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATATTTCATGCTCTTTGTTaGAGAAAGGTAGATGTTGCA +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHIFHALC*RKVDVA
Trigger: TGCAACATCTACCTTTCTCCAACAAAGAGCATGAAA...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR CCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCGCAGGATTGCTTGGATaGTATCAGAATGTGAAACAA +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVAGLLG*YQNVKQ
Trigger: TTGTTTCACATTCTGATACCATCCAAGCAATCCTGC...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCATTTTCTCATGCTGTTaGACATTTTTGGGTGGGTTT +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVIFSCC*TFLGGF
Trigger: AAACCCACCCAAAAATGTTCAACAGCATGAGAAAAT...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000043815.16
ENSMUST00000170234.2
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCATTCACATCAATCTGTaGCAGCAAAGTAAGGACTTT +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVIHINL*QQSKDF
Trigger: AAAGTCCTTACTTTGCTGTCACAGATTGATGTGAAT...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043815.16
ENSMUST00000170234.2
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCATCTGTATACTCATGTaGATCATTCGAGCATCTTCA +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVICILM*IIRASS
Trigger: TGAAGATGCTCGAATGATTCACATGAGTATACAGAT...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR TCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCTCCGCATTATTATCTTaGAATTTAAACTGCCGCAGT +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVSALLS*NLNCRS
Trigger: ACTGCGGCAGTTTAAATTTCAAGATAATAATGCGGA...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR GCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCGTCACTGATGATAAATaGTTCTTTAATGAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVVTDDK*FFNELL
Trigger: GAGCAGCTCATTAAAGAAGCATTTATCATCAGTGAC...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043815.16
ENSMUST00000170234.2
ENSMUST00000201374.4
CDS-3UTR GCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATATTTCATTGGCATAAATaGAAGGAAGTCTGTGATAAG +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHIFHWHK*KEVCDK
Trigger: CTTATCACAGACTTCCTTGCATTTATGCCAATGAAA...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR GCA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATAGAGAAAGGTAGATGTTaGAACTGGGAAAATAAGAAA +
Preference number: 4 (lower is better)
Translates to: LFTSEGEMREVYRKDVHIEKGRC*NWENKK
Trigger: TTTCTTATTTTCCCAGTTGCAACATCTACCTTTCTC...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR CCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCTGTTTCACTTTCATTaGCATAAATGCAAGGAAGTC +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVLFHFH*HKCKEV
Trigger: GACTTCCTTGCATTTATGCCAATGAAAGTGAAACAG...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR CCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCTTTCATGCTCTTTGTTaGAGAAAGGTAGATGTTGCA +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVFHALC*RKVDVA
Trigger: TGCAACATCTACCTTTCTCCAACAAAGAGCATGAAA...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR GCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCTTTCATTGGCATAAATaGAAGGAAGTCTGTGATAAG +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVFHWHK*KEVCDK
Trigger: CTTATCACAGACTTCCTTGCATTTATGCCAATGAAA...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR GCA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCGAGAAAGGTAGATGTTaGAACTGGGAAAATAAGAAA +
Preference number: 4 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVEKGRC*NWENKK
Trigger: TTTCTTATTTTCCCAGTTGCAACATCTACCTTTCTC...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS TCA 90 bp CCACAGGCTGGCAGCGCCAACAGCGCCGCCATCTTGGAGGAGGACTaGGAGAGCGCTCCTGCCGCGGGGAGGACCCCGGGCCCGAGGGCC +
Preference number: 5 (lower is better)
Translates to: PQAGSANSAAILEED*ESAPAAGRTPGPRA
Trigger: GGCCCTCGGGCCCGGGGTCCTCCCCGCGGCAGGAGCGCTCTCTCAGTCCTCCTCCAAGATGGCGGCGCTGTTGGCGCTGCCAGCCTGTGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000201374.4
CDS TCA 90 bp GAGACCAACGGCTGCCTCTGTTCCGTGCGCACAGCCTGGCTTAGGTaGGCAGTCAGGGTGAACACAGCGCCGGCAACCACTGGCATTAAC +
Preference number: 5 (lower is better)
Translates to: ETNGCLCSVRTAWLR*AVRVNTAPATTGIN
Trigger: GTTAATGCCAGTGGTTGCCGGCGCTGTGTTCACCCTGACTGCTCACCTAAGCCAGGCTGTGCGCACGGAACAGAGGCAGCCGTTGGTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS TCA 90 bp GCCTCTGTTCCGTGCGCACAGCCTGGCTTAGGTGAGCAGTCAGGGTaGACACAGCGCCGGCAACCACTGGCATTAACTCTTGTGCGGCTT +
Preference number: 5 (lower is better)
Translates to: ASVPCAQPGLGEQSG*TQRRQPLALTLVRL
Trigger: AAGCCGCACAAGAGTTAATGCCAGTGGTTGCCGGCGCTGTGTTCACCCTGACTGCTCACCTAAGCCAGGCTGTGCGCACGGAACAGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS CCA 90 bp CACTTCCAACTGTCTGCCAAATGTCTTTGTAGGGTCCCCACAGGCTaGCAGCGCCAACAGCGCCGCCATCTTGGAGGAGGACTGAGAGAG +
Preference number: 5 (lower is better)
Translates to: HFQLSAKCLCRVPTG*QRQQRRHLGGGLRE
Trigger: CTCTCTCAGTCCTCCTCCAAGATGGCGGCGCTGTTGGCGCTGCCAGCCTGTGGGGACCCTACAAAGACATTTGGCAGACAGTTGGAAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000201374.4
CDS CCA 90 bp TCATCTGCTTCTGTGAACTCAGCCAGGGCTGTTACATCCGGTAGCTaGGATATCCCCCTCAACGCCAGGGCCCAGGCAAGCCTAACAGTG +
Preference number: 5 (lower is better)
Translates to: SSASVNSARAVTSGS*DIPLNARAQASLTV
Trigger: CACTGTTAGGCTTGCCTGGGCCCTGGCGTTGAGGGGGATATCCCAGCTACCGGATGTAACAGCCCTGGCTGAGTTCACAGAAGCAGATGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS TCA 90 bp ATCAGTCCATCTTGCTCCTTCTGGGTGATGCCACGGGAAGGAAGGTaGCGGTACTGGACACTGTCTGCACTTGGCAGGTCCTTCCGGAGA +
Preference number: 5 (lower is better)
Translates to: ISPSCSFWVMPREGR*RYWTLSALGRSFRR
Trigger: TCTCCGGAAGGACCTGCCAAGTGCAGACAGTGTCCAGTACCGTCACCTTCCTTCCCGTGGCATCACCCAGAAGGAGCAAGATGGACTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS TCA 90 bp GCCGGCTCTCTGCTGCAGGAGATGAGGTCAAAGAACTATCAAGCATaGAAGCATACTGGGCCTCTCCAGGTCCTGAGACCAACGGCTGCC +
Preference number: 5 (lower is better)
Translates to: AGSLLQEMRSKNYQA*KHTGPLQVLRPTAA
Trigger: GGCAGCCGTTGGTCTCAGGACCTGGAGAGGCCCAGTATGCTTTCATGCTTGATAGTTCTTTGACCTCATCTCCTGCAGCAGAGAGCCGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS CCA 90 bp ATACTGCACTGCAGGAGCCCCAGAATCACCACAACAGGCGTCCACTaGGGATGTTCACAGAGGGCCAAGCGAGCATTCTCACTCCAAGTA +
Preference number: 5 (lower is better)
Translates to: ILHCRSPRITTTGVH*GCSQRAKRAFSLQV
Trigger: TACTTGGAGTGAGAATGCTCGCTTGGCCCTCTGTGAACATCCCCAGTGGACGCCTGTTGTGGTGATTCTGGGGCTCCTGCAGTGCAGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS CCA 90 bp CCCAGATTAGAAGGGAATGAGCTCTCCACCAGGGTGCTGATCAACTaGCAAAAGGCCCTAGTCAGGGGGTACTCTTCACACCGGGACTCT +
Preference number: 5 (lower is better)
Translates to: PRLEGNELSTRVLIN*QKALVRGYSSHRDS
Trigger: AGAGTCCCGGTGTGAAGAGTACCCCCTGACTAGGGCCTTTTGCCAGTTGATCAGCACCCTGGTGGAGAGCTCATTCCCTTCTAATCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS CCA 90 bp TGTGAAACAAGAAACTGCAGCACCTGCCCTGCTGCCTGCAAGTGCTaGGACATACTGGATGTGAGGATGACCTGGCACAGCTGGAGAGCT +
Preference number: 5 (lower is better)
Translates to: CETRNCSTCPAACKC*DILDVRMTWHSWRA
Trigger: AGCTCTCCAGCTGTGCCAGGTCATCCTCACATCCAGTATGTCCCAGCACTTGCAGGCAGCAGGGCAGGTGCTGCAGTTTCTTGTTTCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS TCA 90 bp GAGCTGGAAGGAGAATCTGCCGGTATCGGTCCACAGGCGTTGGGATaGATACTGGTGGGTCTCTCATGCCAAACATGCCATGAGAGTCCA +
Preference number: 5 (lower is better)
Translates to: ELEGESAGIGPQALG*ILVGLSCQTCHESP
Trigger: TGGACTCTCATGGCATGTTTGGCATGAGAGACCCACCAGTATTCATCCCAACGCCTGTGGACCGATACCGGCAGATTCTCCTTCCAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS GCA 90 bp TCACCATCTGAGTACGGCTTCACCGGCATGTCATCCAGTAAGAGGTaGAGGAGCCTCTGTGTATGTGAGCGCTGGCGATTCAGAGATGTC +
Preference number: 5 (lower is better)
Translates to: SPSEYGFTGMSSSKR*RSLCVCERWRFRDV
Trigger: GACATCTCTGAATCGCCAGCGCTCACATACACAGAGGCTCCTGCACCTCTTACTGGATGACATGCCGGTGAAGCCGTACTCAGATGGTGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS CCA 90 bp GCTGCAGGAGATGAGGTCAAAGAACTATCAAGCATGAAAGCATACTaGGCCTCTCCAGGTCCTGAGACCAACGGCTGCCTCTGTTCCGTG +
Preference number: 5 (lower is better)
Translates to: AAGDEVKELSSMKAY*ASPGPETNGCLCSV
Trigger: CACGGAACAGAGGCAGCCGTTGGTCTCAGGACCTGGAGAGGCCCAGTATGCTTTCATGCTTGATAGTTCTTTGACCTCATCTCCTGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS CCA 90 bp GAGAATCTGCCGGTATCGGTCCACAGGCGTTGGGATGAATACTGGTaGGTCTCTCATGCCAAACATGCCATGAGAGTCCATTTCTGGGCG +
Preference number: 5 (lower is better)
Translates to: ENLPVSVHRRWDEYW*VSHAKHAMRVHFWA
Trigger: CGCCCAGAAATGGACTCTCATGGCATGTTTGGCATGAGAGACCCACCAGTATTCATCCCAACGCCTGTGGACCGATACCGGCAGATTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS CCA 90 bp CTGGAGAGCTGGAAGGAGAATCTGCCGGTATCGGTCCACAGGCGTTaGGATGAATACTGGTGGGTCTCTCATGCCAAACATGCCATGAGA +
Preference number: 5 (lower is better)
Translates to: LESWKENLPVSVHRR*DEYWWVSHAKHAMR
Trigger: TCTCATGGCATGTTTGGCATGAGAGACCCACCAGTATTCATCCCAACGCCTGTGGACCGATACCGGCAGATTCTCCTTCCAGCTCTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS TCA 90 bp ACCGCTTTCCATCCCAGTATAAAAGGACAGCTACCAATCCCCTGGTaGGGCCAGGGAAATGTGGCTGCTGATGCTCTCCAGCAAGGAGAA +
Preference number: 5 (lower is better)
Translates to: TAFHPSIKGQLPIPW*GQGNVAADALQQGE
Trigger: TTCTCCTTGCTGGAGAGCATCAGCAGCCACATTTCCCTGGCCTCACCAGGGGATTGGTAGCTGTCCTTTTATACTGGGATGGAAAGCGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043815.16
ENSMUST00000170234.2
ENSMUST00000201374.4
CDS TCA 90 bp ATGTCAGCTGGAGAAAAGCAATCAGTCCATCTTGCTCCTTCTGGGTaGTGCCACGGGAAGGAAGGTGACGGTACTGGACACTGTCTGCAC +
Preference number: 5 (lower is better)
Translates to: MSAGEKQSVHLAPSG*CHGKEGDGTGHCLH
Trigger: GTGCAGACAGTGTCCAGTACCGTCACCTTCCTTCCCGTGGCATCACCCAGAAGGAGCAAGATGGACTGATTGCTTTTCTCCAGCTGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS TCA 90 bp AGGTCACGGATAATGAGCTGTCGGTCTTCTGCCTGGATGAGCTCCTaGGGACAAGCTGTCAGGATAATTTCTACCAGCTGCCTCCAGGAC +
Preference number: 5 (lower is better)
Translates to: RSRIMSCRSSAWMSS*GQAVRIISTSCLQD
Trigger: GTCCTGGAGGCAGCTGGTAGAAATTATCCTGACAGCTTGTCCTCAGGAGCTCATCCAGGCAGAAGACCGACAGCTCATTATCCGTGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS TCA 90 bp TCCGATAGACGCAAAGCCTACTGGCCGGCTCTCTGCTGCAGGAGATaGGGTCAAAGAACTATCAAGCATGAAAGCATACTGGGCCTCTCC +
Preference number: 5 (lower is better)
Translates to: SDRRKAYWPALCCRR*GQRTIKHESILGLS
Trigger: GGAGAGGCCCAGTATGCTTTCATGCTTGATAGTTCTTTGACCTCATCTCCTGCAGCAGAGAGCCGGCCAGTAGGCTTTGCGTCTATCGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS GCA 90 bp AGTGTCTTCAGTAGCTCAGCTTTGAGAACTGGAGGAATACTGCACTaGAGGAGCCCCAGAATCACCACAACAGGCGTCCACTGGGGATGT +
Preference number: 5 (lower is better)
Translates to: SVFSSSALRTGGILH*RSPRITTTGVHWGC
Trigger: ACATCCCCAGTGGACGCCTGTTGTGGTGATTCTGGGGCTCCTGCAGTGCAGTATTCCTCCAGTTCTCAAAGCTGAGCTACTGAAGACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS CCA 90 bp ATAATGCCCAAGCCAGGCAGGCGCCAATACGGAACGACTGGAACCTaGGTATCTTGCCGTGCTCCATCTCTGTTAACTGTCTCTGAAAGG +
Preference number: 5 (lower is better)
Translates to: IMPKPGRRQYGTTGT*VSCRAPSLLTVSER
Trigger: CCTTTCAGAGACAGTTAACAGAGATGGAGCACGGCAAGATACCCAGGTTCCAGTCGTTCCGTATTGGCGCCTGCCTGGCTTGGGCATTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS TCA 90 bp TGGAACCTGGGTATCTTGCCGTGCTCCATCTCTGTTAACTGTCTCTaGAAGGCTCGGGGTGAAGAGACACATAGCAGCACTCTGGAGGTT +
Preference number: 5 (lower is better)
Translates to: WNLGILPCSISVNCL*KARGEETHSSTLEV
Trigger: AACCTCCAGAGTGCTGCTATGTGTCTCTTCACCCCGAGCCTTTCAGAGACAGTTAACAGAGATGGAGCACGGCAAGATACCCAGGTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS CCA 90 bp AAGGAGAATCTGCCGGTATCGGTCCACAGGCGTTGGGATGAATACTaGTGGGTCTCTCATGCCAAACATGCCATGAGAGTCCATTTCTGG +
Preference number: 5 (lower is better)
Translates to: KENLPVSVHRRWDEY*WVSHAKHAMRVHFW
Trigger: CCAGAAATGGACTCTCATGGCATGTTTGGCATGAGAGACCCACCAGTATTCATCCCAACGCCTGTGGACCGATACCGGCAGATTCTCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS CCA 90 bp GTAGATAATAATGCCCAAGCCAGGCAGGCGCCAATACGGAACGACTaGAACCTGGGTATCTTGCCGTGCTCCATCTCTGTTAACTGTCTC +
Preference number: 5 (lower is better)
Translates to: VDNNAQARQAPIRND*NLGILPCSISVNCL
Trigger: GAGACAGTTAACAGAGATGGAGCACGGCAAGATACCCAGGTTCCAGTCGTTCCGTATTGGCGCCTGCCTGGCTTGGGCATTATTATCTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS TCA 90 bp CTGTCAGCACCACCAAAGCGACTTAGTAGGCCTAAGCACTGGCGCTaGAACCTTGCAATGTGTCCATGGAGCTCCATTAAGGATCCTTCA +
Preference number: 5 (lower is better)
Translates to: LSAPPKRLSRPKHWR*NLAMCPWSSIKDPS
Trigger: TGAAGGATCCTTAATGGAGCTCCATGGACACATTGCAAGGTTTCAGCGCCAGTGCTTAGGCCTACTAAGTCGCTTTGGTGGTGCTGACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS CCA 90 bp TGCCTTCTTAGTCCTCGGATTAATTCCCTGCAAGAGCTGTTCCAATaGCGAGACGATGAGAGCCAGCTGACTCTCTCTCAGAAGGTCCAT +
Preference number: 5 (lower is better)
Translates to: CLLSPRINSLQELFQ*RDDESQLTLSQKVH
Trigger: ATGGACCTTCTGAGAGAGAGTCAGCTGGCTCTCATCGTCTCGCCATTGGAACAGCTCTTGCAGGGAATTAATCCGAGGACTAAGAAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS TCA 90 bp ATTCCCTGCAAGAGCTGTTCCAATGGCGAGACGATGAGAGCCAGCTaGCTCTCTCTCAGAAGGTCCATGAAAAGGTTCTCCTTTTGCAGA +
Preference number: 5 (lower is better)
Translates to: IPCKSCSNGETMRAS*LSLRRSMKRFSFCR
Trigger: TCTGCAAAAGGAGAACCTTTTCATGGACCTTCTGAGAGAGAGTCAGCTGGCTCTCATCGTCTCGCCATTGGAACAGCTCTTGCAGGGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS GCA 90 bp AATGGTGACTGGCAAGCCCAGGCAAAAAGACTTTCAGCCAGAGACTaGCTGCACTCCTTGATGAGATCAGAAACCTCTTTGCGGTGTTTC +
Preference number: 5 (lower is better)
Translates to: NGDWQAQAKRLSARD*LHSLMRSETSLRCF
Trigger: GAAACACCGCAAAGAGGTTTCTGATCTCATCAAGGAGTGCAGGCAGTCTCTGGCTGAAAGTCTTTTTGCCTGGGCTTGCCAGTCACCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043815.16
ENSMUST00000170234.2
ENSMUST00000201374.4
CDS GCA 90 bp CTCCTTTTGCAGAGTGAGGTTGAGCAGTGCCAGGCAATGCTGAACTaGTTTTTCCAGGTGTTTCTTTCCAGGGAAAGGAGCGTAGGTATC +
Preference number: 5 (lower is better)
Translates to: LLLQSEVEQCQAMLN*FFQVFLSRERSVGI
Trigger: GATACCTACGCTCCTTTCCCTGGAAAGAAACACCTGGAAAAAGCAGTTCAGCATTGCCTGGCACTGCTCAACCTCACTCTGCAAAAGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS CCA 90 bp ATGTCATCCAGTAAGAGGTGCAGGAGCCTCTGTGTATGTGAGCGCTaGCGATTCAGAGATGTCACTCTTAGCTCTATTGAGGCTGTCTTC +
Preference number: 5 (lower is better)
Translates to: MSSSKRCRSLCVCER*RFRDVTLSSIEAVF
Trigger: GAAGACAGCCTCAATAGAGCTAAGAGTGACATCTCTGAATCGCCAGCGCTCACATACACAGAGGCTCCTGCACCTCTTACTGGATGACAT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS TCA 90 bp TCCGAGGGCAGCCTAACACTCCTGGGTCTTGTAGATTGGTGGTACTaGTGGGTTTCTTTAACTCAAAGCCCAACAGGTAGAGAGCAAGAT +
Preference number: 5 (lower is better)
Translates to: SEGSLTLLGLVDWWY*WVSLTQSPTGREQD
Trigger: ATCTTGCTCTCTACCTGTTGGGCTTTGAGTTAAAGAAACCCATCAGTACCACCAATCTACAAGACCCAGGAGTGTTAGGCTGCCCTCGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS CCA 90 bp AAATGTCCAATAAGTAGGAGGGTGTCATCTTTGGGTAATGGTGACTaGCAAGCCCAGGCAAAAAGACTTTCAGCCAGAGACTGCCTGCAC +
Preference number: 5 (lower is better)
Translates to: KCPISRRVSSLGNGD*QAQAKRLSARDCLH
Trigger: GTGCAGGCAGTCTCTGGCTGAAAGTCTTTTTGCCTGGGCTTGCCAGTCACCATTACCCAAAGATGACACCCTCCTACTTATTGGACATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043815.16
ENSMUST00000170234.2
ENSMUST00000201374.4
CDS TCA 90 bp CCTGTCAGCAGAGCTAATTCCTGCAAAGAGCCAGTGCTAACATCCTaGCAGCGCAGGATTGCTTGGATGGTATCAGAATGTGAAACAAGA +
Preference number: 5 (lower is better)
Translates to: PVSRANSCKEPVLTS*QRRIAWMVSECETR
Trigger: TCTTGTTTCACATTCTGATACCATCCAAGCAATCCTGCGCTGTCAGGATGTTAGCACTGGCTCTTTGCAGGAATTAGCTCTGCTGACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS GCA 90 bp AATAGTGCTGATTTCCTCCATCAGCAGAGGCCTCTGACCTATTGCTaGCATACCCTGAAGAGCATTGACTTCAGCTACGAGAACTCTATG +
Preference number: 5 (lower is better)
Translates to: NSADFLHQQRPLTYC*HTLKSIDFSYENSM
Trigger: CATAGAGTTCTCGTAGCTGAAGTCAATGCTCTTCAGGGTATGGCAGCAATAGGTCAGAGGCCTCTGCTGATGGAGGAAATCAGCACTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS GCA 90 bp AAGAATAGTGCTGATTTCCTCCATCAGCAGAGGCCTCTGACCTATTaGTGCCATACCCTGAAGAGCATTGACTTCAGCTACGAGAACTCT +
Preference number: 5 (lower is better)
Translates to: KNSADFLHQQRPLTY*CHTLKSIDFSYENS
Trigger: AGAGTTCTCGTAGCTGAAGTCAATGCTCTTCAGGGTATGGCAGCAATAGGTCAGAGGCCTCTGCTGATGGAGGAAATCAGCACTATTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS CCA 90 bp ATAGCAGCACTCTGGAGGTTAGAGGAGTTCTGCTGTATGAATGACTaGCAATATTCCATCACATTGGCACAAATCTGCTGCATGGCCAGC +
Preference number: 5 (lower is better)
Translates to: IAALWRLEEFCCMND*QYSITLAQICCMAS
Trigger: GCTGGCCATGCAGCAGATTTGTGCCAATGTGATGGAATATTGCCAGTCATTCATACAGCAGAACTCCTCTAACCTCCAGAGTGCTGCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS TCA 90 bp AAAACTCTTCCTGATAGAAGTTTTCAGCCAGCACAACAGCCTCGCTaGGGAACAGGAAGACATTATCAGCAATGGCCAGCTCTGCAATTG +
Preference number: 5 (lower is better)
Translates to: KTLPDRSFQPAQQPR*GTGRHYQQWPALQL
Trigger: CAATTGCAGAGCTGGCCATTGCTGATAATGTCTTCCTGTTCCTCAGCGAGGCTGTTGTGCTGGCTGAAAACTTCTATCAGGAAGAGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS TCA 90 bp CCTGACTGTCTGCAGTATCTGTGTGTATTCCAACGACTGCCAAAGTaGAGCGGCAATTTCAGGAGACTTTCCAAAAGCTGCAAGTGTCTT +
Preference number: 5 (lower is better)
Translates to: PDCLQYLCVFQRLPK*SGNFRRLSKSCKCL
Trigger: AAGACACTTGCAGCTTTTGGAAAGTCTCCTGAAATTGCCGCTTCACTTTGGCAGTCGTTGGAATACACACAGATACTGCAGACAGTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS TCA 90 bp CTTCAATGTCAAGAAGTTTCTTTTGCAGCGACTCTCCGAAAGCGTTaGCAGCATCAGACTGAAGCTGGTCTATATCGTGCTGGTTCACTT +
Preference number: 5 (lower is better)
Translates to: LQCQEVSFAATLRKR*QHQTEAGLYRAGSL
Trigger: AAGTGAACCAGCACGATATAGACCAGCTTCAGTCTGATGCTGTCAACGCTTTCGGAGAGTCGCTGCAAAAGAAACTTCTTGACATTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS GCA 90 bp ATTGTTCCCATGATACAGATACCTGGCGATGTTAACCACGTTGTCTaGCTTCTTAGTCCTCGGATTAATTCCCTGCAAGAGCTGTTCCAA +
Preference number: 5 (lower is better)
Translates to: IVPMIQIPGDVNHVV*LLSPRINSLQELFQ
Trigger: TTGGAACAGCTCTTGCAGGGAATTAATCCGAGGACTAAGAAGGCAGACAACGTGGTTAACATCGCCAGGTATCTGTATCATGGGAACAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS TCA 90 bp GAAATGTGGCTGCTGATGCTCTCCAGCAAGGAGAAGCTCAACAGCTaGCAATTCCCCAATATCAAAAAGGTCACTGATGATAAATGCTTC +
Preference number: 5 (lower is better)
Translates to: EMWLLMLSSKEKLNS*QFPNIKKVTDDKCF
Trigger: GAAGCATTTATCATCAGTGACCTTTTTGATATTGGGGAATTGTCAGCTGTTGAGCTTCTCCTTGCTGGAGAGCATCAGCAGCCACATTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000043815.16
ENSMUST00000170234.2
ENSMUST00000201374.4
CDS TCA 90 bp TGGCTCACACTCTGGTCATGTGTGAAATCGCCAACCATTTTGACCTaGATGTTGGAATTACAAGAGATACAGCAGAGGATCTTCGCACTT +
Preference number: 5 (lower is better)
Translates to: WLTLWSCVKSPTILT*MLELQEIQQRIFAL
Trigger: AAGTGCGAAGATCCTCTGCTGTATCTCTTGTAATTCCAACATTCAGGTCAAAATGGTTGGCGATTTCACACATGACCAGAGTGTGAGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS TCA 90 bp ACGTCTGATGAGAGCCTGGATGAAACTATAGCGGGATCGAACTTTTaGGTACAACCCTTCAATGTCAAGAAGTTTCTTTTGCAGCGACTC +
Preference number: 5 (lower is better)
Translates to: TSDESLDETIAGSNF*VQPFNVKKFLLQRL
Trigger: GAGTCGCTGCAAAAGAAACTTCTTGACATTGAAGGGTTGTACTCAAAAGTTCGATCCCGCTATAGTTTCATCCAGGCTCTCATCAGACGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS CCA 90 bp GAAATGAAGTCGGGTTTGTGTTTCTTCAAAATCATGTCAAGAAGGTaGACAGCTTCAGGCTGTCTTCTCCAAAGAGCACTTCCAACTGTC +
Preference number: 5 (lower is better)
Translates to: EMKSGLCFFKIMSRR*TASGCLLQRALPTV
Trigger: GACAGTTGGAAGTGCTCTTTGGAGAAGACAGCCTGAAGCTGTCCACCTTCTTGACATGATTTTGAAGAAACACAAACCCGACTTCATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043815.16
ENSMUST00000170234.2
ENSMUST00000201374.4
CDS-3UTR CAA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATAAAGTCTGGTTCCTTGTaGCCCCTGGATCGCAACACC +
Preference number: 5 (lower is better)
Translates to: LFTSEGEMREVYRKDVHIKSGSL*PLDRNT
Trigger: GGTGTTGCGATCCAGGGGCAACAAGGAACCAGACTT...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043815.16
ENSMUST00000170234.2
ENSMUST00000201374.4
CDS-3UTR CAA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCGGACACTGTCTGCACTaGGCAGGTCCTTCCGGAGAT +
Preference number: 5 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVGHCLH*AGPSGD
Trigger: ATCTCCGGAAGGACCTGCCAAGTGCAGACAGTGTCC...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR CAA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATAGAGGCCTCTGACCTATaGCTGCCATACCCTGAAGAG +
Preference number: 5 (lower is better)
Translates to: LFTSEGEMREVYRKDVHIEASDL*LPYPEE
Trigger: CTCTTCAGGGTATGGCAGCAATAGGTCAGAGGCCTC...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR CAA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCGCGCATATCATAGACTaGGCACTGGGCCAGCCTCAC +
Preference number: 5 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVAHIID*ALGQPH
Trigger: GTGAGGCTGGCCCAGTGCCAAGTCTATGATATGCGC...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS TCA 90 bp GTCACTCTTAGCTCTATTGAGGCTGTCTTCATAAGCCATGACATCTaGCTCAGCATGGAGATTTCATGCTCTTTGTTGGAGAAAGGTAGA +
Preference number: 5 (lower is better)
Translates to: VTLSSIEAVFISHDI*LSMEISCSLLEKGR
Trigger: TCTACCTTTCTCCAACAAAGAGCATGAAATCTCCATGCTGAGTCAGATGTCATGGCTTATGAAGACAGCCTCAATAGAGCTAAGAGTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS TCA 90 bp ATTTCATCTTTCTTGCTGACCCTATCTCCCTCCGCATTATTATCTTaGAATTTAAACTGCCGCAGTCTGTCAGCACCACCAAAGCGACTT +
Preference number: 5 (lower is better)
Translates to: ISSFLLTLSPSALLS*NLNCRSLSAPPKRL
Trigger: AAGTCGCTTTGGTGGTGCTGACAGACTGCGGCAGTTTAAATTTCAAGATAATAATGCGGAGGGAGATAGGGTCAGCAAGAAAGATGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS GCA 90 bp CCAATATCAAAAAGGTCACTGATGATAAATGCTTCTTTAATGAGCTaGTCAGGAAGAAGTCTGGTTCCTTGTTGCCCCTGGATCGCAACA +
Preference number: 5 (lower is better)
Translates to: PISKRSLMINASLMS*SGRSLVPCCPWIAT
Trigger: TGTTGCGATCCAGGGGCAACAAGGAACCAGACTTCTTCCTGAGCAGCTCATTAAAGAAGCATTTATCATCAGTGACCTTTTTGATATTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000043815.16
ENSMUST00000170234.2
ENSMUST00000201374.4
CDS-3UTR CAA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCAAGTCTGGTTCCTTGTaGCCCCTGGATCGCAACACC +
Preference number: 5 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVKSGSL*PLDRNT
Trigger: GGTGTTGCGATCCAGGGGCAACAAGGAACCAGACTT...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000043815.16
ENSMUST00000170234.2
ENSMUST00000201374.4
CDS-3UTR CAA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATAGCATCTAGGGAGCCATaGGCCTCAACTGTCACTCTT +
Preference number: 5 (lower is better)
Translates to: LFTSEGEMREVYRKDVHIASREP*ASTVTL
Trigger: AAGAGTGACAGTTGAGGCCAATGGCTCCCTAGATGC...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043815.16
ENSMUST00000170234.2
ENSMUST00000201374.4
CDS-3UTR CAA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCGAGGCCTCTGACCTATaGCTGCCATACCCTGAAGAG +
Preference number: 5 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVEASDL*LPYPEE
Trigger: CTCTTCAGGGTATGGCAGCAATAGGTCAGAGGCCTC...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR CAA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATAACTGGCGCTGAAACCTaGCAATGTGTCCATGGAGCT +
Preference number: 5 (lower is better)
Translates to: LFTSEGEMREVYRKDVHITGAET*QCVHGA
Trigger: AGCTCCATGGACACATTGCAAGGTTTCAGCGCCAGT...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR CAA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATATGGAACCTGGGTATCTaGCCGTGCTCCATCTCTGTT +
Preference number: 5 (lower is better)
Translates to: LFTSEGEMREVYRKDVHIWNLGI*PCSISV
Trigger: AACAGAGATGGAGCACGGCAAGATACCCAGGTTCCA...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS GCA 90 bp GTTGGAATTACAAGAGATACAGCAGAGGATCTTCGCACTTTCAAATaGCAACTCAGGATTATTGTTCCCATGATACAGATACCTGGCGAT +
Preference number: 5 (lower is better)
Translates to: VGITRDTAEDLRTFK*QLRIIVPMIQIPGD
Trigger: ATCGCCAGGTATCTGTATCATGGGAACAATAATCCTGAGTTGGCATTTGAAAGTGCGAAGATCCTCTGCTGTATCTCTTGTAATTCCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS CCA 90 bp TTGTTGGAGAAAGGTAGATGTTGCAACTGGGAAAATAAGAAATCCTaGCTGGTTCTCAAGTACCTCATAGTAGGACCAGATGTATCTGAG +
Preference number: 5 (lower is better)
Translates to: LLEKGRCCNWENKKS*LVLKYLIVGPDVSE
Trigger: CTCAGATACATCTGGTCCTACTATGAGGTACTTGAGAACCAGCCAGGATTTCTTATTTTCCCAGTTGCAACATCTACCTTTCTCCAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR CAA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATAAGGAGGGTGTCATCTTaGGGTAATGGTGACTGGCAA +
Preference number: 5 (lower is better)
Translates to: LFTSEGEMREVYRKDVHIRRVSS*GNGDWQ
Trigger: TTGCCAGTCACCATTACCCAAAGATGACACCCTCCT...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043815.16
ENSMUST00000170234.2
ENSMUST00000201374.4
CDS-3UTR CAA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATACTCTCCGGTAAGCTCTaGTACGGAATCGGAGAAACA +
Preference number: 5 (lower is better)
Translates to: LFTSEGEMREVYRKDVHILSGKL*YGIGET
Trigger: TGTTTCTCCGATTCCGTACAAGAGCTTACCGGAGAG...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR CAA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATACCTGGGTCTTGTAGATaGGTGGTACTGATGGGTTTC +
Preference number: 5 (lower is better)
Translates to: LFTSEGEMREVYRKDVHIPGSCR*VVLMGF
Trigger: GAAACCCATCAGTACCACCAATCTACAAGACCCAGG...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR CAA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATACTAGAGCATGCCGCTTaGCATGAAGACACTGTAGCA +
Preference number: 5 (lower is better)
Translates to: LFTSEGEMREVYRKDVHILEHAA*HEDTVA
Trigger: TGCTACAGTGTCTTCATGCAAAGCGGCATGCTCTAG...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR CAA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATACCTGACAGCGCAGGATaGCTTGGATGGTATCAGAAT +
Preference number: 5 (lower is better)
Translates to: LFTSEGEMREVYRKDVHIPDSAG*LGWYQN
Trigger: ATTCTGATACCATCCAAGCAATCCTGCGCTGTCAGG...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR CAA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCACTGGCGCTGAAACCTaGCAATGTGTCCATGGAGCT +
Preference number: 5 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVTGAET*QCVHGA
Trigger: AGCTCCATGGACACATTGCAAGGTTTCAGCGCCAGT...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR CAA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCTGGAACCTGGGTATCTaGCCGTGCTCCATCTCTGTT +
Preference number: 5 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVWNLGI*PCSISV
Trigger: AACAGAGATGGAGCACGGCAAGATACCCAGGTTCCA...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR CAA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATAAGCAGTTTGGCACGGTaGTTGATCAGCTTCACCAGA +
Preference number: 5 (lower is better)
Translates to: LFTSEGEMREVYRKDVHISSLAR*LISFTR
Trigger: TCTGGTGAAGCTGATCAACAACCGTGCCAAACTGCT...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR CAA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCAGGAGGGTGTCATCTTaGGGTAATGGTGACTGGCAA +
Preference number: 5 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVRRVSS*GNGDWQ
Trigger: TTGCCAGTCACCATTACCCAAAGATGACACCCTCCT...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043815.16
ENSMUST00000170234.2
ENSMUST00000201374.4
CDS-3UTR CAA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCTCTCCGGTAAGCTCTaGTACGGAATCGGAGAAACA +
Preference number: 5 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVLSGKL*YGIGET
Trigger: TGTTTCTCCGATTCCGTACAAGAGCTTACCGGAGAG...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR CAA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATAGAAAAGGTTCTCCTTTaGCAGAGTGAGGTTGAGCAG +
Preference number: 5 (lower is better)
Translates to: LFTSEGEMREVYRKDVHIEKVLL*QSEVEQ
Trigger: CTGCTCAACCTCACTCTGCAAAAGGAGAACCTTTTC...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR CAA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATAGCAAGATTGGGTGGATaGCGTTCTAGAGATGTGATG +
Preference number: 5 (lower is better)
Translates to: LFTSEGEMREVYRKDVHIARLGG*RSRDVM
Trigger: CATCACATCTCTAGAACGCAATCCACCCAATCTTGC...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR CAA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATATGCCCCTGTAAATTCTaGTGCTCACAGTTGGCAATG +
Preference number: 5 (lower is better)
Translates to: LFTSEGEMREVYRKDVHICPCKF*CSQLAM
Trigger: CATTGCCAACTGTGAGCACAAGAATTTACAGGGGCA...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR CAA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCTAGAGCATGCCGCTTaGCATGAAGACACTGTAGCA +
Preference number: 5 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVLEHAA*HEDTVA
Trigger: TGCTACAGTGTCTTCATGCAAAGCGGCATGCTCTAG...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR CAA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATACTCATCCGGAGGAAGTaGTTCTACATTCTGCAGCTT +
Preference number: 5 (lower is better)
Translates to: LFTSEGEMREVYRKDVHILIRRK*FYILQL
Trigger: AAGCTGCAGAATGTAGAACAACTTCCTCCGGATGAG...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR CAA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCTCACCAGACGACGTCTaGCTAAGACACACTTCTGTG +
Preference number: 5 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVSPDDV*LRHTSV
Trigger: CACAGAAGTGTGTCTTAGCAAGACGTCGTCTGGTGA...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR CAA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCAGCAGTTTGGCACGGTaGTTGATCAGCTTCACCAGA +
Preference number: 5 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVSSLAR*LISFTR
Trigger: TCTGGTGAAGCTGATCAACAACCGTGCCAAACTGCT...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR CAA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATAGTCAAGAAGTTTCTTTaGCAGCGACTCTCCGAAAGC +
Preference number: 5 (lower is better)
Translates to: LFTSEGEMREVYRKDVHIVKKFL*QRLSES
Trigger: GCTTTCGGAGAGTCGCTGCAAAAGAAACTTCTTGAC...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS TCA 90 bp TCTAGAGATGTGATGAGAAGATTCAAGATATGGATTCTCGTTTCATaGCGGATCGCAGCTAACTTCTTTTCTAATTCTGAGCCCTCTTCT +
Preference number: 5 (lower is better)
Translates to: SRDVMRRFKIWILVS*RIAANFFSNSEPSS
Trigger: AGAAGAGGGCTCAGAATTAGAAAAGAAGTTAGCTGCGATCCGTCATGAAACGAGAATCCATATCTTGAATCTTCTCATCACATCTCTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS GCA 90 bp ATTACCCATCTGTATACTCATGTGAATCATTCGAGCATCTTCATCTaGCCGATTCTTCAGCTGTTTCACTTTCATTGGCATAAATGCAAG +
Preference number: 5 (lower is better)
Translates to: ITHLYTHVNHSSIFI*PILQLFHFHWHKCK
Trigger: CTTGCATTTATGCCAATGAAAGTGAAACAGCTGAAGAATCGGGCAGATGAAGATGCTCGAATGATTCACATGAGTATACAGATGGGTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS CCA 90 bp ATGGAGATTTCATGCTCTTTGTTGGAGAAAGGTAGATGTTGCAACTaGGAAAATAAGAAATCCTGGCTGGTTCTCAAGTACCTCATAGTA +
Preference number: 5 (lower is better)
Translates to: MEISCSLLEKGRCCN*ENKKSWLVLKYLIV
Trigger: TACTATGAGGTACTTGAGAACCAGCCAGGATTTCTTATTTTCCCAGTTGCAACATCTACCTTTCTCCAACAAAGAGCATGAAATCTCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR CAA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATATCGTTCCTCTGTGCTTaGGTCTATAAAGCTGGTATC +
Preference number: 5 (lower is better)
Translates to: LFTSEGEMREVYRKDVHISFLCA*VYKAGI
Trigger: GATACCAGCTTTATAGACCAAAGCACAGAGGAACGA...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043815.16
ENSMUST00000170234.2
ENSMUST00000201374.4
CDS-3UTR CAA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATATTCAGTAGCTCAGCTTaGAGAACTGGAGGAATACTG +
Preference number: 5 (lower is better)
Translates to: LFTSEGEMREVYRKDVHIFSSSA*RTGGIL
Trigger: CAGTATTCCTCCAGTTCTCAAAGCTGAGCTACTGAA...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR CAA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCGAAAAGGTTCTCCTTTaGCAGAGTGAGGTTGAGCAG +
Preference number: 5 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVEKVLL*QSEVEQ
Trigger: CTGCTCAACCTCACTCTGCAAAAGGAGAACCTTTTC...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR CAA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATATCAATTTCATCTTTCTaGCTGACCCTATCTCCCTCC +
Preference number: 5 (lower is better)
Translates to: LFTSEGEMREVYRKDVHISISSF*LTLSPS
Trigger: GGAGGGAGATAGGGTCAGCAAGAAAGATGAAATTGA...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR CAA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCGTCAAGAAGTTTCTTTaGCAGCGACTCTCCGAAAGC +
Preference number: 5 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVVKKFL*QRLSES
Trigger: GCTTTCGGAGAGTCGCTGCAAAAGAAACTTCTTGAC...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR CAA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATAAGCGGGATCGAACTTTaGAGTACAACCCTTCAATGT +
Preference number: 5 (lower is better)
Translates to: LFTSEGEMREVYRKDVHISGIEL*STTLQC
Trigger: ACATTGAAGGGTTGTACTCAAAAGTTCGATCCCGCT...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR CAA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATATTTGTAAGTCAATCCTaGCTCCATCAGCTCATCTGT +
Preference number: 5 (lower is better)
Translates to: LFTSEGEMREVYRKDVHIFVSQS*LHQLIC
Trigger: ACAGATGAGCTGATGGAGCAAGGATTGACTTACAAA...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043815.16
ENSMUST00000170234.2
ENSMUST00000201374.4
CDS-3UTR CAA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCTCGTTCCTCTGTGCTTaGGTCTATAAAGCTGGTATC +
Preference number: 5 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVSFLCA*VYKAGI
Trigger: GATACCAGCTTTATAGACCAAAGCACAGAGGAACGA...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043815.16
ENSMUST00000170234.2
ENSMUST00000201374.4
CDS-3UTR CAA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCTTCAGTAGCTCAGCTTaGAGAACTGGAGGAATACTG +
Preference number: 5 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVFSSSA*RTGGIL
Trigger: CAGTATTCCTCCAGTTCTCAAAGCTGAGCTACTGAA...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR CAA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATACAATATTCCATCACATaGGCACAAATCTGCTGCATG +
Preference number: 5 (lower is better)
Translates to: LFTSEGEMREVYRKDVHIQYSIT*AQICCM
Trigger: CATGCAGCAGATTTGTGCCAATGTGATGGAATATTG...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR CAA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCAGCGGGATCGAACTTTaGAGTACAACCCTTCAATGT +
Preference number: 5 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVSGIEL*STTLQC
Trigger: ACATTGAAGGGTTGTACTCAAAAGTTCGATCCCGCT...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR CAA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATATTTTTGGGTGGGTTTTaGAACAGTGAAATGAAGTCG +
Preference number: 5 (lower is better)
Translates to: LFTSEGEMREVYRKDVHIFLGGF*NSEMKS
Trigger: CGACTTCATTTCACTGTTCAAAAACCCACCCAAAAA...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000043815.16
ENSMUST00000170234.2
ENSMUST00000201374.4
CDS-3UTR CAA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCTTTGTAAGTCAATCCTaGCTCCATCAGCTCATCTGT +
Preference number: 5 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVFVSQS*LHQLIC
Trigger: ACAGATGAGCTGATGGAGCAAGGATTGACTTACAAA...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043815.16
ENSMUST00000170234.2
ENSMUST00000201374.4
CDS-3UTR CAA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATAATTTCATGCTCTTTGTaGGAGAAAGGTAGATGTTGC +
Preference number: 5 (lower is better)
Translates to: LFTSEGEMREVYRKDVHIISCSL*EKGRCC
Trigger: GCAACATCTACCTTTCTCCAACAAAGAGCATGAAAT...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR CAA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATAGAGATTTCATGCTCTTaGTTGGAGAAAGGTAGATGT +
Preference number: 5 (lower is better)
Translates to: LFTSEGEMREVYRKDVHIEISCS*LEKGRC
Trigger: ACATCTACCTTTCTCCAACAAAGAGCATGAAATCTC...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR CAA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATACTCCGCATTATTATCTaGAAATTTAAACTGCCGCAG +
Preference number: 5 (lower is better)
Translates to: LFTSEGEMREVYRKDVHILRIII*KFKLPQ
Trigger: CTGCGGCAGTTTAAATTTCAAGATAATAATGCGGAG...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR CAA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATAGAAATGAAGTCGGGTTaGTGTTTCTTCAAAATCATG +
Preference number: 5 (lower is better)
Translates to: LFTSEGEMREVYRKDVHIEMKSG*CFFKIM
Trigger: CATGATTTTGAAGAAACACAAACCCGACTTCATTTC...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043815.16
ENSMUST00000170234.2
ENSMUST00000201374.4
CDS-3UTR CAA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCTTTTTGGGTGGGTTTTaGAACAGTGAAATGAAGTCG +
Preference number: 5 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVFLGGF*NSEMKS
Trigger: CGACTTCATTTCACTGTTCAAAAACCCACCCAAAAA...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000043815.16
ENSMUST00000170234.2
ENSMUST00000201374.4
CDS-3UTR CAA 90 bp TTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCATATAAATTTTCTCATGCTGTaGAACATTTTTGGGTGGGTT +
Preference number: 5 (lower is better)
Translates to: LFTSEGEMREVYRKDVHINFLML*NIFGWV
Trigger: AACCCACCCAAAAATGTTCAACAGCATGAGAAAATT...TATATGGACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000043815.16
ENSMUST00000170234.2
ENSMUST00000201374.4
CDS-3UTR CAA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCATTTCATGCTCTTTGTaGGAGAAAGGTAGATGTTGC +
Preference number: 5 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVISCSL*EKGRCC
Trigger: GCAACATCTACCTTTCTCCAACAAAGAGCATGAAAT...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR CAA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCCTCCGCATTATTATCTaGAAATTTAAACTGCCGCAG +
Preference number: 5 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVLRIII*KFKLPQ
Trigger: CTGCGGCAGTTTAAATTTCAAGATAATAATGCGGAG...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR CAA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCAATCTTGGGAATCCATaGGCGTGCAATGTAACAAAT +
Preference number: 5 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVNLGNP*ACNVTN
Trigger: ATTTGTTACATTGCACGCCAATGGATTCCCAAGATT...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS-3UTR CAA 90 bp ATTTTATTGTTCACAAGTGAGGGAGAAATGAGAGAGGTTTACAGAAAAGATGTCGAAATGAAGTCGGGTTaGTGTTTCTTCAAAATCATG +
Preference number: 5 (lower is better)
Translates to: ILLFTSEGEMREVYRKDVEMKSG*CFFKIM
Trigger: CATGATTTTGAAGAAACACAAACCCGACTTCATTTC...GACATCTTTTCTGTAAACCTCTCTCATTTCTCCCTCACTTGTGAACAATAAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000043815.16
ENSMUST00000170234.2
ENSMUST00000201374.4
CDS GCA 72 bp CGCCGCCATCTTGGAGGAGGACTGAGAGAGCGCTCCTaGCGCGGGGAGGACCCCGGGCCCGAGGGCCTGCCC +
Preference number: 6 (lower is better)
Translates to: RRHLGGGLRERS*RGEDPGPEGLP
Trigger: GGGCAGGCCCTCGGGCCCGGGGTCCTCCCCGCGGCAGGAGCGCTCTCTCAGTCCTCCTCCAAGATGGCGGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000201374.4
CDS TCA 72 bp GGCAGCGCCAACAGCGCCGCCATCTTGGAGGAGGACTaGGAGAGCGCTCCTGCCGCGGGGAGGACCCCGGGC +
Preference number: 6 (lower is better)
Translates to: GSANSAAILEED*ESAPAAGRTPG
Trigger: GCCCGGGGTCCTCCCCGCGGCAGGAGCGCTCTCTCAGTCCTCCTCCAAGATGGCGGCGCTGTTGGCGCTGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000201374.4
CDS GCA 72 bp GGCCTCCGAGAACGCCATGCGAGGCTCGAGCGGGTGTaGACAAGGCTCCCCGCCCTGCTCTGGCCTAGGGCC +
Preference number: 6 (lower is better)
Translates to: GLRERHARLERV*TRLPALLWPRA
Trigger: GGCCCTAGGCCAGAGCAGGGCGGGGAGCCTTGTGCACACCCGCTCGAGCCTCGCATGGCGTTCTCGGAGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000201374.4
CDS CCA 72 bp CCCCACAGGCTGGCAGCGCCAACAGCGCCGCCATCTTaGAGGAGGACTGAGAGAGCGCTCCTGCCGCGGGGA +
Preference number: 6 (lower is better)
Translates to: PHRLAAPTAPPS*RRTERALLPRG
Trigger: TCCCCGCGGCAGGAGCGCTCTCTCAGTCCTCCTCCAAGATGGCGGCGCTGTTGGCGCTGCCAGCCTGTGGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000201374.4
CDS TCA 72 bp GGCTGCCTCTGTTCCGTGCGCACAGCCTGGCTTAGGTaGGCAGTCAGGGTGAACACAGCGCCGGCAACCACT +
Preference number: 6 (lower is better)
Translates to: GCLCSVRTAWLR*AVRVNTAPATT
Trigger: AGTGGTTGCCGGCGCTGTGTTCACCCTGACTGCTCACCTAAGCCAGGCTGTGCGCACGGAACAGAGGCAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS CCA 72 bp TCTGTGAACTCAGCCAGGGCTGTTACATCCGGTAGCTaGGATATCCCCCTCAACGCCAGGGCCCAGGCAAGC +
Preference number: 6 (lower is better)
Translates to: SVNSARAVTSGS*DIPLNARAQAS
Trigger: GCTTGCCTGGGCCCTGGCGTTGAGGGGGATATCCCAGCTACCGGATGTAACAGCCCTGGCTGAGTTCACAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS CCA 72 bp CTGTCTGCCAAATGTCTTTGTAGGGTCCCCACAGGCTaGCAGCGCCAACAGCGCCGCCATCTTGGAGGAGGA +
Preference number: 6 (lower is better)
Translates to: LSAKCLCRVPTG*QRQQRRHLGGG
Trigger: TCCTCCTCCAAGATGGCGGCGCTGTTGGCGCTGCCAGCCTGTGGGGACCCTACAAAGACATTTGGCAGACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000201374.4
CDS TCA 72 bp TCTTGCTCCTTCTGGGTGATGCCACGGGAAGGAAGGTaGCGGTACTGGACACTGTCTGCACTTGGCAGGTCC +
Preference number: 6 (lower is better)
Translates to: SCSFWVMPREGR*RYWTLSALGRS
Trigger: GGACCTGCCAAGTGCAGACAGTGTCCAGTACCGTCACCTTCCTTCCCGTGGCATCACCCAGAAGGAGCAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS GCA 72 bp GCCACGGGAAGGAAGGTGACGGTACTGGACACTGTCTaGACTTGGCAGGTCCTTCCGGAGATGCTCATGGTA +
Preference number: 6 (lower is better)
Translates to: ATGRKVTVLDTV*TWQVLPEMLMV
Trigger: TACCATGAGCATCTCCGGAAGGACCTGCCAAGTGCAGACAGTGTCCAGTACCGTCACCTTCCTTCCCGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS CCA 72 bp TGCAGGAGCCCCAGAATCACCACAACAGGCGTCCACTaGGGATGTTCACAGAGGGCCAAGCGAGCATTCTCA +
Preference number: 6 (lower is better)
Translates to: CRSPRITTTGVH*GCSQRAKRAFS
Trigger: TGAGAATGCTCGCTTGGCCCTCTGTGAACATCCCCAGTGGACGCCTGTTGTGGTGATTCTGGGGCTCCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS CCA 72 bp ACTGGATGTGAGGATGACCTGGCACAGCTGGAGAGCTaGAAGGAGAATCTGCCGGTATCGGTCCACAGGCGT +
Preference number: 6 (lower is better)
Translates to: TGCEDDLAQLES*KENLPVSVHRR
Trigger: ACGCCTGTGGACCGATACCGGCAGATTCTCCTTCCAGCTCTCCAGCTGTGCCAGGTCATCCTCACATCCAGT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS GCA 72 bp GAGTACGGCTTCACCGGCATGTCATCCAGTAAGAGGTaGAGGAGCCTCTGTGTATGTGAGCGCTGGCGATTC +
Preference number: 6 (lower is better)
Translates to: EYGFTGMSSSKR*RSLCVCERWRF
Trigger: GAATCGCCAGCGCTCACATACACAGAGGCTCCTGCACCTCTTACTGGATGACATGCCGGTGAAGCCGTACTC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS CCA 72 bp GACAGCTACCAATCCCCTGGTGAGGCCAGGGAAATGTaGCTGCTGATGCTCTCCAGCAAGGAGAAGCTCAAC +
Preference number: 6 (lower is better)
Translates to: DSYQSPGEAREM*LLMLSSKEKLN
Trigger: GTTGAGCTTCTCCTTGCTGGAGAGCATCAGCAGCCACATTTCCCTGGCCTCACCAGGGGATTGGTAGCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043815.16
ENSMUST00000170234.2
ENSMUST00000201374.4
CDS CCA 72 bp AATGCCCAAGCCAGGCAGGCGCCAATACGGAACGACTaGAACCTGGGTATCTTGCCGTGCTCCATCTCTGTT +
Preference number: 6 (lower is better)
Translates to: NAQARQAPIRND*NLGILPCSISV
Trigger: AACAGAGATGGAGCACGGCAAGATACCCAGGTTCCAGTCGTTCCGTATTGGCGCCTGCCTGGCTTGGGCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS CAA 72 bp GGGAAGGAAGGTGACGGTACTGGACACTGTCTGCACTaGGCAGGTCCTTCCGGAGATGCTCATGGTAGAGCA +
Preference number: 6 (lower is better)
Translates to: GKEGDGTGHCLH*AGPSGDAHGRA
Trigger: TGCTCTACCATGAGCATCTCCGGAAGGACCTGCCAAGTGCAGACAGTGTCCAGTACCGTCACCTTCCTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS CCA 72 bp GGAAGGAAGGTGACGGTACTGGACACTGTCTGCACTTaGCAGGTCCTTCCGGAGATGCTCATGGTAGAGCAA +
Preference number: 6 (lower is better)
Translates to: GRKVTVLDTVCT*QVLPEMLMVEQ
Trigger: TTGCTCTACCATGAGCATCTCCGGAAGGACCTGCCAAGTGCAGACAGTGTCCAGTACCGTCACCTTCCTTCC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS CCA 72 bp CTGCCGGTATCGGTCCACAGGCGTTGGGATGAATACTaGTGGGTCTCTCATGCCAAACATGCCATGAGAGTC +
Preference number: 6 (lower is better)
Translates to: LPVSVHRRWDEY*WVSHAKHAMRV
Trigger: GACTCTCATGGCATGTTTGGCATGAGAGACCCACCAGTATTCATCCCAACGCCTGTGGACCGATACCGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS CCA 72 bp AAGCCAGGCAGGCGCCAATACGGAACGACTGGAACCTaGGTATCTTGCCGTGCTCCATCTCTGTTAACTGTC +
Preference number: 6 (lower is better)
Translates to: KPGRRQYGTTGT*VSCRAPSLLTV
Trigger: GACAGTTAACAGAGATGGAGCACGGCAAGATACCCAGGTTCCAGTCGTTCCGTATTGGCGCCTGCCTGGCTT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS TCA 72 bp GGAGAAAAGCAATCAGTCCATCTTGCTCCTTCTGGGTaGTGCCACGGGAAGGAAGGTGACGGTACTGGACAC +
Preference number: 6 (lower is better)
Translates to: GEKQSVHLAPSG*CHGKEGDGTGH
Trigger: GTGTCCAGTACCGTCACCTTCCTTCCCGTGGCATCACCCAGAAGGAGCAAGATGGACTGATTGCTTTTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS TCA 72 bp GGAGAATCTGCCGGTATCGGTCCACAGGCGTTGGGATaGATACTGGTGGGTCTCTCATGCCAAACATGCCAT +
Preference number: 6 (lower is better)
Translates to: GESAGIGPQALG*ILVGLSCQTCH
Trigger: ATGGCATGTTTGGCATGAGAGACCCACCAGTATTCATCCCAACGCCTGTGGACCGATACCGGCAGATTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS GCA 72 bp AGTAGCTCAGCTTTGAGAACTGGAGGAATACTGCACTaGAGGAGCCCCAGAATCACCACAACAGGCGTCCAC +
Preference number: 6 (lower is better)
Translates to: SSSALRTGGILH*RSPRITTTGVH
Trigger: GTGGACGCCTGTTGTGGTGATTCTGGGGCTCCTGCAGTGCAGTATTCCTCCAGTTCTCAAAGCTGAGCTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS GCA 72 bp TGTGAAACAAGAAACTGCAGCACCTGCCCTGCTGCCTaGAAGTGCTGGGACATACTGGATGTGAGGATGACC +
Preference number: 6 (lower is better)
Translates to: CETRNCSTCPAA*KCWDILDVRMT
Trigger: GGTCATCCTCACATCCAGTATGTCCCAGCACTTGCAGGCAGCAGGGCAGGTGCTGCAGTTTCTTGTTTCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS CCA 72 bp CCGGTATCGGTCCACAGGCGTTGGGATGAATACTGGTaGGTCTCTCATGCCAAACATGCCATGAGAGTCCAT +
Preference number: 6 (lower is better)
Translates to: PVSVHRRWDEYW*VSHAKHAMRVH
Trigger: ATGGACTCTCATGGCATGTTTGGCATGAGAGACCCACCAGTATTCATCCCAACGCCTGTGGACCGATACCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS GCA 72 bp AGGCGCCAATACGGAACGACTGGAACCTGGGTATCTTaGCGTGCTCCATCTCTGTTAACTGTCTCTGAAAGG +
Preference number: 6 (lower is better)
Translates to: RRQYGTTGTWVS*RAPSLLTVSER
Trigger: CCTTTCAGAGACAGTTAACAGAGATGGAGCACGGCAAGATACCCAGGTTCCAGTCGTTCCGTATTGGCGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS CCA 72 bp AGTCCTCGGATTAATTCCCTGCAAGAGCTGTTCCAATaGCGAGACGATGAGAGCCAGCTGACTCTCTCTCAG +
Preference number: 6 (lower is better)
Translates to: SPRINSLQELFQ*RDDESQLTLSQ
Trigger: CTGAGAGAGAGTCAGCTGGCTCTCATCGTCTCGCCATTGGAACAGCTCTTGCAGGGAATTAATCCGAGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS CCA 72 bp GATGAGGTCAAAGAACTATCAAGCATGAAAGCATACTaGGCCTCTCCAGGTCCTGAGACCAACGGCTGCCTC +
Preference number: 6 (lower is better)
Translates to: DEVKELSSMKAY*ASPGPETNGCL
Trigger: GAGGCAGCCGTTGGTCTCAGGACCTGGAGAGGCCCAGTATGCTTTCATGCTTGATAGTTCTTTGACCTCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS CCA 72 bp GTCTCTCATGCCAAACATGCCATGAGAGTCCATTTCTaGGCGCATATCATAGACTTGGCACTGGGCCAGCCT +
Preference number: 6 (lower is better)
Translates to: VSHAKHAMRVHF*AHIIDLALGQP
Trigger: AGGCTGGCCCAGTGCCAAGTCTATGATATGCGCCCAGAAATGGACTCTCATGGCATGTTTGGCATGAGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS CCA 72 bp TGGAAGGAGAATCTGCCGGTATCGGTCCACAGGCGTTaGGATGAATACTGGTGGGTCTCTCATGCCAAACAT +
Preference number: 6 (lower is better)
Translates to: WKENLPVSVHRR*DEYWWVSHAKH
Trigger: ATGTTTGGCATGAGAGACCCACCAGTATTCATCCCAACGCCTGTGGACCGATACCGGCAGATTCTCCTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS CAA 90 bp CAACCTCAGCGACTTCCCACTTTTCAGCGGCTCTCCGGTAAGCTCTaGTACGGAATCGGAGAAACACAGAATCTCTCAGGAACTGCAAGT +
Preference number: 6 (lower is better)
Translates to: QPQRLPTFQRLSGKL*YGIGETQNLSGTAS
Trigger: ACTTGCAGTTCCTGAGAGATTCTGTGTTTCTCCGATTCCGTACAAGAGCTTACCGGAGAGCCGCTGAAAAGTGGGAAGTCGCTGAGGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS TCA 72 bp AAGAGCTGTTCCAATGGCGAGACGATGAGAGCCAGCTaGCTCTCTCTCAGAAGGTCCATGAAAAGGTTCTCC +
Preference number: 6 (lower is better)
Translates to: KSCSNGETMRAS*LSLRRSMKRFS
Trigger: GGAGAACCTTTTCATGGACCTTCTGAGAGAGAGTCAGCTGGCTCTCATCGTCTCGCCATTGGAACAGCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS TCA 72 bp CTGCTGCAGGAGATGAGGTCAAAGAACTATCAAGCATaGAAGCATACTGGGCCTCTCCAGGTCCTGAGACCA +
Preference number: 6 (lower is better)
Translates to: LLQEMRSKNYQA*KHTGPLQVLRP
Trigger: TGGTCTCAGGACCTGGAGAGGCCCAGTATGCTTTCATGCTTGATAGTTCTTTGACCTCATCTCCTGCAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS TCA 72 bp CGCAAAGCCTACTGGCCGGCTCTCTGCTGCAGGAGATaGGGTCAAAGAACTATCAAGCATGAAAGCATACTG +
Preference number: 6 (lower is better)
Translates to: RKAYWPALCCRR*GQRTIKHESIL
Trigger: CAGTATGCTTTCATGCTTGATAGTTCTTTGACCTCATCTCCTGCAGCAGAGAGCCGGCCAGTAGGCTTTGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS TCA 72 bp CCACCAAAGCGACTTAGTAGGCCTAAGCACTGGCGCTaGAACCTTGCAATGTGTCCATGGAGCTCCATTAAG +
Preference number: 6 (lower is better)
Translates to: PPKRLSRPKHWR*NLAMCPWSSIK
Trigger: CTTAATGGAGCTCCATGGACACATTGCAAGGTTTCAGCGCCAGTGCTTAGGCCTACTAAGTCGCTTTGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS TCA 72 bp GGTATCTTGCCGTGCTCCATCTCTGTTAACTGTCTCTaGAAGGCTCGGGGTGAAGAGACACATAGCAGCACT +
Preference number: 6 (lower is better)
Translates to: GILPCSISVNCL*KARGEETHSST
Trigger: AGTGCTGCTATGTGTCTCTTCACCCCGAGCCTTTCAGAGACAGTTAACAGAGATGGAGCACGGCAAGATACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS GCA 72 bp TTAATGAGCTGCTCAGGAAGAAGTCTGGTTCCTTGTTaGCCCTGGATCGCAACACCCTCTGAACTGGCTTTC +
Preference number: 6 (lower is better)
Translates to: LMSCSGRSLVPC*PWIATPSELAF
Trigger: GAAAGCCAGTTCAGAGGGTGTTGCGATCCAGGGGCAACAAGGAACCAGACTTCTTCCTGAGCAGCTCATTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043815.16
ENSMUST00000170234.2
ENSMUST00000201374.4
CDS GCA 72 bp CAGAGTGAGGTTGAGCAGTGCCAGGCAATGCTGAACTaGTTTTTCCAGGTGTTTCTTTCCAGGGAAAGGAGC +
Preference number: 6 (lower is better)
Translates to: QSEVEQCQAMLN*FFQVFLSRERS
Trigger: GCTCCTTTCCCTGGAAAGAAACACCTGGAAAAAGCAGTTCAGCATTGCCTGGCACTGCTCAACCTCACTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS GCA 72 bp GATTTCCTCCATCAGCAGAGGCCTCTGACCTATTGCTaGCATACCCTGAAGAGCATTGACTTCAGCTACGAG +
Preference number: 6 (lower is better)
Translates to: DFLHQQRPLTYC*HTLKSIDFSYE
Trigger: CTCGTAGCTGAAGTCAATGCTCTTCAGGGTATGGCAGCAATAGGTCAGAGGCCTCTGCTGATGGAGGAAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS GCA 72 bp GCTGATTTCCTCCATCAGCAGAGGCCTCTGACCTATTaGTGCCATACCCTGAAGAGCATTGACTTCAGCTAC +
Preference number: 6 (lower is better)
Translates to: ADFLHQQRPLTY*CHTLKSIDFSY
Trigger: GTAGCTGAAGTCAATGCTCTTCAGGGTATGGCAGCAATAGGTCAGAGGCCTCTGCTGATGGAGGAAATCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS CCA 72 bp GAAAGGCTCGGGGTGAAGAGACACATAGCAGCACTCTaGAGGTTAGAGGAGTTCTGCTGTATGAATGACTGG +
Preference number: 6 (lower is better)
Translates to: ERLGVKRHIAAL*RLEEFCCMNDW
Trigger: CCAGTCATTCATACAGCAGAACTCCTCTAACCTCCAGAGTGCTGCTATGTGTCTCTTCACCCCGAGCCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS CAA 72 bp GCTTCCAAGGCTGAGAGTCCTGGAGGCGAGAGTGAATaGTCGAAACGTACTGTCTCTCTGTCAACAGTGGAA +
Preference number: 6 (lower is better)
Translates to: ASKAESPGGESE*SKRTVSLSTVE
Trigger: TTCCACTGTTGACAGAGAGACAGTACGTTTCGACAATTCACTCTCGCCTCCAGGACTCTCAGCCTTGGAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS CAA 72 bp CGACTTCCCACTTTTCAGCGGCTCTCCGGTAAGCTCTaGTACGGAATCGGAGAAACACAGAATCTCTCAGGA +
Preference number: 6 (lower is better)
Translates to: RLPTFQRLSGKL*YGIGETQNLSG
Trigger: TCCTGAGAGATTCTGTGTTTCTCCGATTCCGTACAAGAGCTTACCGGAGAGCCGCTGAAAAGTGGGAAGTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS CAA 72 bp GTCCGAGGGCAGCCTAACACTCCTGGGTCTTGTAGATaGGTGGTACTGATGGGTTTCTTTAACTCAAAGCCC +
Preference number: 6 (lower is better)
Translates to: VRGQPNTPGSCR*VVLMGFFNSKP
Trigger: GGGCTTTGAGTTAAAGAAACCCATCAGTACCACCAATCTACAAGACCCAGGAGTGTTAGGCTGCCCTCGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS CAA 90 bp TCAGGAGACTTTCCAAAAGCTGCAAGTGTCTTCAGTAGCTCAGCTTaGAGAACTGGAGGAATACTGCACTGCAGGAGCCCCAGAATCACC +
Preference number: 6 (lower is better)
Translates to: SGDFPKAASVFSSSA*RTGGILHCRSPRIT
Trigger: GGTGATTCTGGGGCTCCTGCAGTGCAGTATTCCTCCAGTTCTCAAAGCTGAGCTACTGAAGACACTTGCAGCTTTTGGAAAGTCTCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS CAA 90 bp AGCCAGCTGACTCTCTCTCAGAAGGTCCATGAAAAGGTTCTCCTTTaGCAGAGTGAGGTTGAGCAGTGCCAGGCAATGCTGAACTGCTTT +
Preference number: 6 (lower is better)
Translates to: SQLTLSQKVHEKVLL*QSEVEQCQAMLNCF
Trigger: AAAGCAGTTCAGCATTGCCTGGCACTGCTCAACCTCACTCTGCAAAAGGAGAACCTTTTCATGGACCTTCTGAGAGAGAGTCAGCTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS TCA 72 bp CCTGATAGAAGTTTTCAGCCAGCACAACAGCCTCGCTaGGGAACAGGAAGACATTATCAGCAATGGCCAGCT +
Preference number: 6 (lower is better)
Translates to: PDRSFQPAQQPR*GTGRHYQQWPA
Trigger: AGCTGGCCATTGCTGATAATGTCTTCCTGTTCCTCAGCGAGGCTGTTGTGCTGGCTGAAAACTTCTATCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS TCA 72 bp TATAGGAACAGAGGGACAGCAGTTTGGCACGGTTGTTaGTCAGCTTCACCAGACGACGTCTTGCTAAGACAC +
Preference number: 6 (lower is better)
Translates to: YRNRGTAVWHGC*SASPDDVLLRH
Trigger: GTGTCTTAGCAAGACGTCGTCTGGTGAAGCTGATCAACAACCGTGCCAAACTGCTGTCCCTCTGTTCCTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS GCA 72 bp TGGCAAGCCCAGGCAAAAAGACTTTCAGCCAGAGACTaGCTGCACTCCTTGATGAGATCAGAAACCTCTTTG +
Preference number: 6 (lower is better)
Translates to: WQAQAKRLSARD*LHSLMRSETSL
Trigger: CAAAGAGGTTTCTGATCTCATCAAGGAGTGCAGGCAGTCTCTGGCTGAAAGTCTTTTTGCCTGGGCTTGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043815.16
ENSMUST00000170234.2
ENSMUST00000201374.4
CDS CCA 72 bp AGTAAGAGGTGCAGGAGCCTCTGTGTATGTGAGCGCTaGCGATTCAGAGATGTCACTCTTAGCTCTATTGAG +
Preference number: 6 (lower is better)
Translates to: SKRCRSLCVCER*RFRDVTLSSIE
Trigger: CTCAATAGAGCTAAGAGTGACATCTCTGAATCGCCAGCGCTCACATACACAGAGGCTCCTGCACCTCTTACT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS CAA 72 bp ACTCTCTCTCAGAAGGTCCATGAAAAGGTTCTCCTTTaGCAGAGTGAGGTTGAGCAGTGCCAGGCAATGCTG +
Preference number: 6 (lower is better)
Translates to: TLSQKVHEKVLL*QSEVEQCQAML
Trigger: CAGCATTGCCTGGCACTGCTCAACCTCACTCTGCAAAAGGAGAACCTTTTCATGGACCTTCTGAGAGAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS CAA 72 bp AGCGACTTAGTAGGCCTAAGCACTGGCGCTGAAACCTaGCAATGTGTCCATGGAGCTCCATTAAGGATCCTT +
Preference number: 6 (lower is better)
Translates to: SDLVGLSTGAET*QCVHGAPLRIL
Trigger: AAGGATCCTTAATGGAGCTCCATGGACACATTGCAAGGTTTCAGCGCCAGTGCTTAGGCCTACTAAGTCGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS CAA 72 bp TCTTCCAAGGCTGAGAGTCCTGGAGGCGAGAGTGAATaGTCGAAACGTACTGTCTCTCTGTCAACAGTGGAA +
Preference number: 6 (lower is better)
Translates to: SSKAESPGGESE*SKRTVSLSTVE
Trigger: TTCCACTGTTGACAGAGAGACAGTACGTTTCGACAATTCACTCTCGCCTCCAGGACTCTCAGCCTTGGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170234.2
CDS TCA 72 bp TCTGGTTCCTTGTTGCCCCTGGATCGCAACACCCTCTaGACTGGCTTTCTGAATTTTCTCATGCTGTTGAAC +
Preference number: 6 (lower is better)
Translates to: SGSLLPLDRNTL*TGFLNFLMLLN
Trigger: GTTCAACAGCATGAGAAAATTCAGAAAGCCAGTTCAGAGGGTGTTGCGATCCAGGGGCAACAAGGAACCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043815.16
ENSMUST00000170234.2
ENSMUST00000201374.4
CDS CAA 90 bp AGAAGAGCCATAAGGAGGCACAGATTCACTGCATCTAGGGAGCCATaGGCCTCAACTGTCACTCTTTCCAAATGTCCAATAAGTAGGAGG +
Preference number: 6 (lower is better)
Translates to: RRAIRRHRFTASREP*ASTVTLSKCPISRR
Trigger: CCTCCTACTTATTGGACATTTGGAAAGAGTGACAGTTGAGGCCAATGGCTCCCTAGATGCAGTGAATCTGTGCCTCCTTATGGCTCTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043815.16
ENSMUST00000170234.2
ENSMUST00000201374.4
CDS CAA 90 bp ACTGTCACTCTTTCCAAATGTCCAATAAGTAGGAGGGTGTCATCTTaGGGTAATGGTGACTGGCAAGCCCAGGCAAAAAGACTTTCAGCC +
Preference number: 6 (lower is better)
Translates to: TVTLSKCPISRRVSS*GNGDWQAQAKRLSA
Trigger: GGCTGAAAGTCTTTTTGCCTGGGCTTGCCAGTCACCATTACCCAAAGATGACACCCTCCTACTTATTGGACATTTGGAAAGAGTGACAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043815.16
ENSMUST00000170234.2
ENSMUST00000201374.4
CDS TCA 72 bp CTGCAGTATCTGTGTGTATTCCAACGACTGCCAAAGTaGAGCGGCAATTTCAGGAGACTTTCCAAAAGCTGC +
Preference number: 6 (lower is better)
Translates to: LQYLCVFQRLPK*SGNFRRLSKSC
Trigger: GCAGCTTTTGGAAAGTCTCCTGAAATTGCCGCTTCACTTTGGCAGTCGTTGGAATACACACAGATACTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS TCA 72 bp AGAGCTAATTCCTGCAAAGAGCCAGTGCTAACATCCTaGCAGCGCAGGATTGCTTGGATGGTATCAGAATGT +
Preference number: 6 (lower is better)
Translates to: RANSCKEPVLTS*QRRIAWMVSEC
Trigger: ACATTCTGATACCATCCAAGCAATCCTGCGCTGTCAGGATGTTAGCACTGGCTCTTTGCAGGAATTAGCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS TCA 72 bp CAAGAAGTTTCTTTTGCAGCGACTCTCCGAAAGCGTTaGCAGCATCAGACTGAAGCTGGTCTATATCGTGCT +
Preference number: 6 (lower is better)
Translates to: QEVSFAATLRKR*QHQTEAGLYRA
Trigger: AGCACGATATAGACCAGCTTCAGTCTGATGCTGTCAACGCTTTCGGAGAGTCGCTGCAAAAGAAACTTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS TCA 72 bp AGCCTAACACTCCTGGGTCTTGTAGATTGGTGGTACTaGTGGGTTTCTTTAACTCAAAGCCCAACAGGTAGA +
Preference number: 6 (lower is better)
Translates to: SLTLLGLVDWWY*WVSLTQSPTGR
Trigger: TCTACCTGTTGGGCTTTGAGTTAAAGAAACCCATCAGTACCACCAATCTACAAGACCCAGGAGTGTTAGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS TCA 72 bp TTCTTGCTGACCCTATCTCCCTCCGCATTATTATCTTaGAATTTAAACTGCCGCAGTCTGTCAGCACCACCA +
Preference number: 6 (lower is better)
Translates to: FLLTLSPSALLS*NLNCRSLSAPP
Trigger: TGGTGGTGCTGACAGACTGCGGCAGTTTAAATTTCAAGATAATAATGCGGAGGGAGATAGGGTCAGCAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS GCA 72 bp TCTATTTCATTGAGTTCAACCTCAATACCAATAGCCTaGCTCTGGCTTGGAACCCTGACTGTCTGCAGTATC +
Preference number: 6 (lower is better)
Translates to: SISLSSTSIPIA*LWLGTLTVCSI
Trigger: GATACTGCAGACAGTCAGGGTTCCAAGCCAGAGGCAGGCTATTGGTATTGAGGTTGAACTCAATGAAATAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS GCA 72 bp ATGATACAGATACCTGGCGATGTTAACCACGTTGTCTaGCTTCTTAGTCCTCGGATTAATTCCCTGCAAGAG +
Preference number: 6 (lower is better)
Translates to: MIQIPGDVNHVV*LLSPRINSLQE
Trigger: CTCTTGCAGGGAATTAATCCGAGGACTAAGAAGGCAGACAACGTGGTTAACATCGCCAGGTATCTGTATCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS CCA 72 bp CTCTGGAGGTTAGAGGAGTTCTGCTGTATGAATGACTaGCAATATTCCATCACATTGGCACAAATCTGCTGC +
Preference number: 6 (lower is better)
Translates to: LWRLEEFCCMND*QYSITLAQICC
Trigger: GCAGCAGATTTGTGCCAATGTGATGGAATATTGCCAGTCATTCATACAGCAGAACTCCTCTAACCTCCAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS CAA 72 bp CTTTCCAAATGTCCAATAAGTAGGAGGGTGTCATCTTaGGGTAATGGTGACTGGCAAGCCCAGGCAAAAAGA +
Preference number: 6 (lower is better)
Translates to: LSKCPISRRVSS*GNGDWQAQAKR
Trigger: TCTTTTTGCCTGGGCTTGCCAGTCACCATTACCCAAAGATGACACCCTCCTACTTATTGGACATTTGGAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000043815.16
ENSMUST00000170234.2
ENSMUST00000201374.4
CDS CAA 72 bp ATAAGGAGGCACAGATTCACTGCATCTAGGGAGCCATaGGCCTCAACTGTCACTCTTTCCAAATGTCCAATA +
Preference number: 6 (lower is better)
Translates to: IRRHRFTASREP*ASTVTLSKCPI
Trigger: TATTGGACATTTGGAAAGAGTGACAGTTGAGGCCAATGGCTCCCTAGATGCAGTGAATCTGTGCCTCCTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000043815.16
ENSMUST00000170234.2
ENSMUST00000201374.4
CDS TCA 72 bp AGCACTCTGGAGGTTAGAGGAGTTCTGCTGTATGAATaGCTGGCAATATTCCATCACATTGGCACAAATCTG +
Preference number: 6 (lower is better)
Translates to: STLEVRGVLLYE*LAIFHHIGTNL
Trigger: CAGATTTGTGCCAATGTGATGGAATATTGCCAGTCATTCATACAGCAGAACTCCTCTAACCTCCAGAGTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS GCA 72 bp ATGAAAGAAATGCTCCCAGGAAACAGGACTGCCACCTaGTCCCTGTATGTTTTCAACATGACTACTACCATT +
Preference number: 6 (lower is better)
Translates to: MKEMLPGNRTAT*SLYVFNMTTTI
Trigger: AATGGTAGTAGTCATGTTGAAAACATACAGGGAGCAGGTGGCAGTCCTGTTTCCTGGGAGCATTTCTTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS GCA 72 bp ATAAGGAATGAAAGAAATGCTCCCAGGAAACAGGACTaGCACCTGCTCCCTGTATGTTTTCAACATGACTAC +
Preference number: 6 (lower is better)
Translates to: IRNERNAPRKQD*HLLPVCFQHDY
Trigger: GTAGTCATGTTGAAAACATACAGGGAGCAGGTGGCAGTCCTGTTTCCTGGGAGCATTTCTTTCATTCCTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS GCA 72 bp TTTGAGTACAACCCTTCAATGTCAAGAAGTTTCTTTTaGAGCGACTCTCCGAAAGCGTTGACAGCATCAGAC +
Preference number: 6 (lower is better)
Translates to: FEYNPSMSRSFF*SDSPKALTASD
Trigger: GTCTGATGCTGTCAACGCTTTCGGAGAGTCGCTGCAAAAGAAACTTCTTGACATTGAAGGGTTGTACTCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS CCA 72 bp GCATTCTCACTCCAAGTAATGATAGTAGATGTCAGCTaGAGAAAAGCAATCAGTCCATCTTGCTCCTTCTGG +
Preference number: 6 (lower is better)
Translates to: AFSLQVMIVDVS*RKAISPSCSFW
Trigger: CCAGAAGGAGCAAGATGGACTGATTGCTTTTCTCCAGCTGACATCTACTATCATTACTTGGAGTGAGAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS CAA 90 bp AATTTCATCTTTCTTGCTGACCCTATCTCCCTCCGCATTATTATCTaGAAATTTAAACTGCCGCAGTCTGTCAGCACCACCAAAGCGACT +
Preference number: 6 (lower is better)
Translates to: NFIFLADPISLRIII*KFKLPQSVSTTKAT
Trigger: AGTCGCTTTGGTGGTGCTGACAGACTGCGGCAGTTTAAATTTCAAGATAATAATGCGGAGGGAGATAGGGTCAGCAAGAAAGATGAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS TCA 72 bp GCACTTTCAAATGCCAACTCAGGATTATTGTTCCCATaGTACAGATACCTGGCGATGTTAACCACGTTGTCT +
Preference number: 6 (lower is better)
Translates to: ALSNANSGLLFP*YRYLAMLTTLS
Trigger: AGACAACGTGGTTAACATCGCCAGGTATCTGTATCATGGGAACAATAATCCTGAGTTGGCATTTGAAAGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS TCA 72 bp CTCTGGTCATGTGTGAAATCGCCAACCATTTTGACCTaGATGTTGGAATTACAAGAGATACAGCAGAGGATC +
Preference number: 6 (lower is better)
Translates to: LWSCVKSPTILT*MLELQEIQQRI
Trigger: GATCCTCTGCTGTATCTCTTGTAATTCCAACATTCAGGTCAAAATGGTTGGCGATTTCACACATGACCAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS TCA 72 bp CTATATCGTGCTGGTTCACTTGAGATAGTCCACTTCTaGAGTCCAGATTGGGTTCTTGTAGTCTTCTGCTTT +
Preference number: 6 (lower is better)
Translates to: LYRAGSLEIVHF*SPDWVLVVFCF
Trigger: AAAGCAGAAGACTACAAGAACCCAATCTGGACTTCAGAAGTGGACTATCTCAAGTGAACCAGCACGATATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS GCA 72 bp CCGATTCTTCAGCTGTTTCACTTTCATTGGCATAAATaGAAGGAAGTCTGTGATAAGACTGTGGATTCTGCG +
Preference number: 6 (lower is better)
Translates to: PILQLFHFHWHK*KEVCDKTVDSA
Trigger: CGCAGAATCCACAGTCTTATCACAGACTTCCTTGCATTTATGCCAATGAAAGTGAAACAGCTGAAGAATCGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS CAA 72 bp TTCTGCTGTATGAATGACTGGCAATATTCCATCACATaGGCACAAATCTGCTGCATGGCCAGCTCAATTTCA +
Preference number: 6 (lower is better)
Translates to: FCCMNDWQYSIT*AQICCMASSIS
Trigger: TGAAATTGAGCTGGCCATGCAGCAGATTTGTGCCAATGTGATGGAATATTGCCAGTCATTCATACAGCAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS TCA 72 bp GAGAGCCTGGATGAAACTATAGCGGGATCGAACTTTTaGGTACAACCCTTCAATGTCAAGAAGTTTCTTTTG +
Preference number: 6 (lower is better)
Translates to: ESLDETIAGSNF*VQPFNVKKFLL
Trigger: CAAAAGAAACTTCTTGACATTGAAGGGTTGTACTCAAAAGTTCGATCCCGCTATAGTTTCATCCAGGCTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS GCA 72 bp CTGTATACTCATGTGAATCATTCGAGCATCTTCATCTaGCCGATTCTTCAGCTGTTTCACTTTCATTGGCAT +
Preference number: 6 (lower is better)
Translates to: LYTHVNHSSIFI*PILQLFHFHWH
Trigger: ATGCCAATGAAAGTGAAACAGCTGAAGAATCGGGCAGATGAAGATGCTCGAATGATTCACATGAGTATACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS CCA 72 bp AAAGGTAGATGTTGCAACTGGGAAAATAAGAAATCCTaGCTGGTTCTCAAGTACCTCATAGTAGGACCAGAT +
Preference number: 6 (lower is better)
Translates to: KGRCCNWENKKS*LVLKYLIVGPD
Trigger: ATCTGGTCCTACTATGAGGTACTTGAGAACCAGCCAGGATTTCTTATTTTCCCAGTTGCAACATCTACCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS GCA 72 bp ACAAGAGATACAGCAGAGGATCTTCGCACTTTCAAATaGCAACTCAGGATTATTGTTCCCATGATACAGATA +
Preference number: 6 (lower is better)
Translates to: TRDTAEDLRTFK*QLRIIVPMIQI
Trigger: TATCTGTATCATGGGAACAATAATCCTGAGTTGGCATTTGAAAGTGCGAAGATCCTCTGCTGTATCTCTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS CCA 72 bp ACATCTGACTCAGCATGGAGATTTCATGCTCTTTGTTaGAGAAAGGTAGATGTTGCAACTGGGAAAATAAGA +
Preference number: 6 (lower is better)
Translates to: TSDSAWRFHALC*RKVDVATGKIR
Trigger: TCTTATTTTCCCAGTTGCAACATCTACCTTTCTCCAACAAAGAGCATGAAATCTCCATGCTGAGTCAGATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4
CDS CAA 72 bp TTGGGTGGGTTTTTGAACAGTGAAATGAAGTCGGGTTaGTGTTTCTTCAAAATCATGTCAAGAAGGTGGACA +
Preference number: 6 (lower is better)
Translates to: LGGFLNSEMKSG*CFFKIMSRRWT
Trigger: TGTCCACCTTCTTGACATGATTTTGAAGAAACACAAACCCGACTTCATTTCACTGTTCAAAAACCCACCCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000043815.16
ENSMUST00000170234.2
ENSMUST00000201374.4
CDS CAA 72 bp AAGGTGGTGAATCATATCATCTCGTTCCTCTGTGCTTaGGTCTATAAAGCTGGTATCAAAACAGTACAGAAG +
Preference number: 6 (lower is better)
Translates to: KVVNHIISFLCA*VYKAGIKTVQK
Trigger: CTTCTGTACTGTTTTGATACCAGCTTTATAGACCAAAGCACAGAGGAACGAGATGATATGATTCACCACCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043815.16
ENSMUST00000170234.2
ENSMUST00000201374.4
CDS TCA 72 bp GTGATGAGAAGATTCAAGATATGGATTCTCGTTTCATaGCGGATCGCAGCTAACTTCTTTTCTAATTCTGAG +
Preference number: 6 (lower is better)
Translates to: VMRRFKIWILVS*RIAANFFSNSE
Trigger: CTCAGAATTAGAAAAGAAGTTAGCTGCGATCCGTCATGAAACGAGAATCCATATCTTGAATCTTCTCATCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000043815.16
ENSMUST00000201374.4