Pregenerated sensors for NUP160 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051329Ensembl transcript IDs: ENSMUST00000057481.7
Found 164 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | GAAACCGTGTTAGCACCACAAGCAAGCACAGGGTCGGTCCTGACTTaGTTTTCTTTGTTTGTGCAGAATGCAGACTTGGGCGCCAGACAC | + |
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Preference number: 2 (lower is better) Translates to: ETVLAPQASTGSVLT*FSLFVQNADLGARH Trigger: GTGTCTGGCGCCCAAGTCTGCATTCTGCACAAACAAAGAAAACAAAGTCAGGACCGACCCTGTGCTTGCTTGTGGTGCTAACACGGTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| 3UTR-3UTR GCA 90 bp | AGTGACAATTTGGTGGTCAGCTGTAACAAACCAACAACCATTAGCTATTACGGGTGTTTTCTTTGTTTGTaGAGAATGCAGACTTGGGCG | + |
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Preference number: 2 (lower is better) Translates to: SDNLVVSCNKPTTISYYGCFLCL*RMQTWA Trigger: CGCCCAAGTCTGCATTCTGCACAAACAAAGAAAACA...CCCGTAATAGCTAATGGTTGTTGGTTTGTTACAGCTGACCACCAAATTGTCACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| 3UTR-3UTR CAA 90 bp | AGTGACAATTTGGTGGTCAGCTGTAACAAACCAACAACCATTAGCTATTACGGGAAGGTGAGTTTCTGTTaGCAGATAAAGGATGTCTTC | + |
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Preference number: 3 (lower is better) Translates to: SDNLVVSCNKPTTISYYGKVSFC*QIKDVF Trigger: GAAGACATCCTTTATCTGCAAACAGAAACTCACCTT...CCCGTAATAGCTAATGGTTGTTGGTTTGTTACAGCTGACCACCAAATTGTCACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS-3UTR GCA 90 bp | CTGACTTTGTTTTCTTTGTTTGTGCAGAATGCAGACTTGGGCGCCAGACACATCAGGGCGATCAGACACTaGCCCAGAGGCTGGCTGTAC | + |
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Preference number: 4 (lower is better) Translates to: LTLFSLFVQNADLGARHIRAIRH*PRGWLY Trigger: GTACAGCCAGCCTCTGGGGCAGTGTCTGATCGCCCT...GATGTGTCTGGCGCCCAAGTCTGCATTCTGCACAAACAAAGAAAACAAAGTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS-3UTR CCA 90 bp | GTCGGTCCTGACTTTGTTTTCTTTGTTTGTGCAGAATGCAGACTTGGGCGCCAGATTCCCGAAAGTGCCTaGGCCTTTCGCGTTCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: VGPDFVFFVCAECRLGRQIPESA*AFRVQL Trigger: GAGCTGAACGCGAAAGGCCCAGGCACTTTCGGGAAT...CTGGCGCCCAAGTCTGCATTCTGCACAAACAAAGAAAACAAAGTCAGGACCGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS-3UTR TCA 90 bp | GTTAGCACCACAAGCAAGCACAGGGTCGGTCCTGACTTTGTTTTCTTTGTTTGTTGGGCATCCAGCCTGTaGGTAATCGCTGCATCACGG | + |
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Preference number: 4 (lower is better) Translates to: VSTTSKHRVGPDFVFFVCWASSL*VIAASR Trigger: CCGTGATGCAGCGATTACTCACAGGCTGGATGCCCA...ACAAACAAAGAAAACAAAGTCAGGACCGACCCTGTGCTTGCTTGTGGTGCTAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS-3UTR GCA 90 bp | AGTGACAATTTGGTGGTCAGCTGTAACAAACCAACAACCATTAGCTATTACGGGGCTGCTAAGCCAGGCTaGAGACGTGGTGGAACCCGG | + |
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Preference number: 4 (lower is better) Translates to: SDNLVVSCNKPTTISYYGAAKPG*RRGGTR Trigger: CCGGGTTCCACCACGTCTGCAGCCTGGCTTAGCAGC...CCCGTAATAGCTAATGGTTGTTGGTTTGTTACAGCTGACCACCAAATTGTCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS-3UTR CCA 90 bp | TCGGTCCTGACTTTGTTTTCTTTGTTTGTGCAGAATGCAGACTTGGGCGCCAGAACTGCAACTTGGGGGTaGACACAATCTCCCCGTCCT | + |
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Preference number: 4 (lower is better) Translates to: SVLTLFSLFVQNADLGARTATWG*TQSPRP Trigger: AGGACGGGGAGATTGTGTCCACCCCCAAGTTGCAGT...TCTGGCGCCCAAGTCTGCATTCTGCACAAACAAAGAAAACAAAGTCAGGACCGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS-3UTR CCA 90 bp | TCGGTCCTGACTTTGTTTTCTTTGTTTGTGCAGAATGCAGACTTGGGCGCCAGACAGACGACAGCTGATTaGTTGCTAGCCAGGACCACG | + |
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Preference number: 4 (lower is better) Translates to: SVLTLFSLFVQNADLGARQTTAD*LLARTT Trigger: CGTGGTCCTGGCTAGCAACCAATCAGCTGTCGTCTG...TCTGGCGCCCAAGTCTGCATTCTGCACAAACAAAGAAAACAAAGTCAGGACCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS-3UTR TCA 90 bp | GTCCTGACTTTGTTTTCTTTGTTTGTGCAGAATGCAGACTTGGGCGCCAGACACCAATGTCGCAGACTGTaGATTCCCGAAAGTGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: VLTLFSLFVQNADLGARHQCRRL*IPESAW Trigger: CCAGGCACTTTCGGGAATTCACAGTCTGCGACATTG...GTGTCTGGCGCCCAAGTCTGCATTCTGCACAAACAAAGAAAACAAAGTCAGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS-3UTR GCA 90 bp | ATGCAGACTTGGGCGCCAGACACATCGTTTATAGTTAGAAAAACTGGCCTTGAGTGGTTGGGGCAGCTGTaGACTCGCCATCATGATTCC | + |
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Preference number: 4 (lower is better) Translates to: MQTWAPDTSFIVRKTGLEWLGQL*TRHHDS Trigger: GGAATCATGATGGCGAGTGCACAGCTGCCCCAACCA...CTCAAGGCCAGTTTTTCTAACTATAAACGATGTGTCTGGCGCCCAAGTCTGCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS-3UTR TCA 90 bp | TCGGTCCTGACTTTGTTTTCTTTGTTTGTGCAGAATGCAGACTTGGGCGCCAGAGTCCTGTTCCTGCAGTaGGCCGAAGGTCTTTGTTTA | + |
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Preference number: 4 (lower is better) Translates to: SVLTLFSLFVQNADLGARVLFLQ*AEGLCL Trigger: TAAACAAAGACCTTCGGCTCACTGCAGGAACAGGAC...TCTGGCGCCCAAGTCTGCATTCTGCACAAACAAAGAAAACAAAGTCAGGACCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS-3UTR TCA 90 bp | AGTGACAATTTGGTGGTCAGCTGTAACAAACCAACAACCATTAGCTATTACGGGTGGGAGAGGGCTTCCTaGTACTGGAGAACGCAGGCA | + |
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Preference number: 4 (lower is better) Translates to: SDNLVVSCNKPTTISYYGWERAS*YWRTQA Trigger: TGCCTGCGTTCTCCAGTATCAGGAAGCCCTCTCCCA...CCCGTAATAGCTAATGGTTGTTGGTTTGTTACAGCTGACCACCAAATTGTCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS-3UTR TCA 90 bp | GTCCTGACTTTGTTTTCTTTGTTTGTGCAGAATGCAGACTTGGGCGCCAGACACGACCCAACATTGACTTaGCACCAGGGATGCAGTAGT | + |
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Preference number: 4 (lower is better) Translates to: VLTLFSLFVQNADLGARHDPTLT*HQGCSS Trigger: ACTACTGCATCCCTGGTGTCAAGTCAATGTTGGGTC...GTGTCTGGCGCCCAAGTCTGCATTCTGCACAAACAAAGAAAACAAAGTCAGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS-3UTR TCA 90 bp | CTGACTTTGTTTTCTTTGTTTGTGCAGAATGCAGACTTGGGCGCCAGACACATCCATCGGGGCTGTTGCTaGCAGTGGAAACTCAATTCC | + |
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Preference number: 4 (lower is better) Translates to: LTLFSLFVQNADLGARHIHRGCC*QWKLNS Trigger: GGAATTGAGTTTCCACTGTCAGCAACAGCCCCGATG...GATGTGTCTGGCGCCCAAGTCTGCATTCTGCACAAACAAAGAAAACAAAGTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS-3UTR GCA 90 bp | GTCCTGACTTTGTTTTCTTTGTTTGTGCAGAATGCAGACTTGGGCGCCAGACACCGCTTCTCCTTGTGCTaGTTCTCCTCCAAACTGCAA | + |
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Preference number: 4 (lower is better) Translates to: VLTLFSLFVQNADLGARHRFSLC*FSSKLQ Trigger: TTGCAGTTTGGAGGAGAAGCAGCACAAGGAGAAGCG...GTGTCTGGCGCCCAAGTCTGCATTCTGCACAAACAAAGAAAACAAAGTCAGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS-3UTR CCA 90 bp | TCGGTCCTGACTTTGTTTTCTTTGTTTGTGCAGAATGCAGACTTGGGCGCCAGAGGCTTAGAGGGGCTTTaGGTTGAGAGAAGAGATGAG | + |
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Preference number: 4 (lower is better) Translates to: SVLTLFSLFVQNADLGARGLEGL*VERRDE Trigger: CTCATCTCTTCTCTCAACCCAAAGCCCCTCTAAGCC...TCTGGCGCCCAAGTCTGCATTCTGCACAAACAAAGAAAACAAAGTCAGGACCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS-3UTR CCA 90 bp | GTCGGTCCTGACTTTGTTTTCTTTGTTTGTGCAGAATGCAGACTTGGGCGCCAGACAAGATCCTGCAGTTaGGAGCGTTCACATAGAACC | + |
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Preference number: 4 (lower is better) Translates to: VGPDFVFFVCAECRLGRQTRSCS*ERSHRT Trigger: GGTTCTATGTGAACGCTCCCAACTGCAGGATCTTGT...CTGGCGCCCAAGTCTGCATTCTGCACAAACAAAGAAAACAAAGTCAGGACCGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS-3UTR TCA 90 bp | CTGACTTTGTTTTCTTTGTTTGTGCAGAATGCAGACTTGGGCGCCAGACACATCGACAAGACCCAACATTaGCTTGACACCAGGGATGCA | + |
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Preference number: 4 (lower is better) Translates to: LTLFSLFVQNADLGARHIDKTQH*LDTRDA Trigger: TGCATCCCTGGTGTCAAGTCAATGTTGGGTCTTGTC...GATGTGTCTGGCGCCCAAGTCTGCATTCTGCACAAACAAAGAAAACAAAGTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS-3UTR GCA 90 bp | GTCCTGACTTTGTTTTCTTTGTTTGTGCAGAATGCAGACTTGGGCGCCAGACACTCCTCTGTCAAAAGGTaGTCATCGGGCAGGAGATAT | + |
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Preference number: 4 (lower is better) Translates to: VLTLFSLFVQNADLGARHSSVKR*SSGRRY Trigger: ATATCTCCTGCCCGATGAGCACCTTTTGACAGAGGA...GTGTCTGGCGCCCAAGTCTGCATTCTGCACAAACAAAGAAAACAAAGTCAGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS-3UTR GCA 90 bp | TTGTGCAGAATGCAGACTTGGGCGCCAGACACATCGTTTATAGTTAGAAAAACTCATTCCAGAGCCTTCTaGACTTCCCCCGTAACCAGG | + |
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Preference number: 4 (lower is better) Translates to: LCRMQTWAPDTSFIVRKTHSRAF*TSPVTR Trigger: CCTGGTTACGGGGGAAGTGCAGAAGGCTCTGGAATG...AGTTTTTCTAACTATAAACGATGTGTCTGGCGCCCAAGTCTGCATTCTGCACAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS-3UTR GCA 90 bp | CTGACTTTGTTTTCTTTGTTTGTGCAGAATGCAGACTTGGGCGCCAGACACATCCGCAAACAGTCTAACTaGCTGCTGGAGTCCGGAATT | + |
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Preference number: 4 (lower is better) Translates to: LTLFSLFVQNADLGARHIRKQSN*LLESGI Trigger: AATTCCGGACTCCAGCAGGCAGTTAGACTGTTTGCG...GATGTGTCTGGCGCCCAAGTCTGCATTCTGCACAAACAAAGAAAACAAAGTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS-3UTR CCA 90 bp | GTCCTGACTTTGTTTTCTTTGTTTGTGCAGAATGCAGACTTGGGCGCCAGACACTCAGTGCTCACCAACTaGAAAACGCAGAACTGTCCT | + |
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Preference number: 4 (lower is better) Translates to: VLTLFSLFVQNADLGARHSVLTN*KTQNCP Trigger: AGGACAGTTCTGCGTTTTCCAGTTGGTGAGCACTGA...GTGTCTGGCGCCCAAGTCTGCATTCTGCACAAACAAAGAAAACAAAGTCAGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS-3UTR TCA 90 bp | TCGGTCCTGACTTTGTTTTCTTTGTTTGTGCAGAATGCAGACTTGGGCGCCAGAGGCACACCATGTTTGTaGCAGGATTCAAATGTAGAG | + |
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Preference number: 4 (lower is better) Translates to: SVLTLFSLFVQNADLGARGTPCL*QDSNVE Trigger: CTCTACATTTGAATCCTGTCACAAACATGGTGTGCC...TCTGGCGCCCAAGTCTGCATTCTGCACAAACAAAGAAAACAAAGTCAGGACCGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS-3UTR GCA 90 bp | AGTGACAATTTGGTGGTCAGCTGTAACAAACCAACAACCATTAGCTATTACGGGGTGAATTCCCGAAAGTaGCTGGGCCTTTCGCGTTCA | + |
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Preference number: 4 (lower is better) Translates to: SDNLVVSCNKPTTISYYGVNSRK*LGLSRS Trigger: TGAACGCGAAAGGCCCAGGCACTTTCGGGAATTCAC...CCCGTAATAGCTAATGGTTGTTGGTTTGTTACAGCTGACCACCAAATTGTCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS-3UTR GCA 90 bp | TCGGTCCTGACTTTGTTTTCTTTGTTTGTGCAGAATGCAGACTTGGGCGCCAGAAGCGATTATTCTCAGTaGTCACCAACTGGAAAACGC | + |
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Preference number: 4 (lower is better) Translates to: SVLTLFSLFVQNADLGARSDYSQ*SPTGKR Trigger: GCGTTTTCCAGTTGGTGAGCACTGAGAATAATCGCT...TCTGGCGCCCAAGTCTGCATTCTGCACAAACAAAGAAAACAAAGTCAGGACCGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS-3UTR GCA 90 bp | GTCCTGACTTTGTTTTCTTTGTTTGTGCAGAATGCAGACTTGGGCGCCAGACACCGCAGGCATAGAACTTaGACCAGAATTCCTGTTGTA | + |
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Preference number: 4 (lower is better) Translates to: VLTLFSLFVQNADLGARHRRHRT*TRIPVV Trigger: TACAACAGGAATTCTGGTGCAAGTTCTATGCCTGCG...GTGTCTGGCGCCCAAGTCTGCATTCTGCACAAACAAAGAAAACAAAGTCAGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS-3UTR GCA 90 bp | AGTGACAATTTGGTGGTCAGCTGTAACAAACCAACAACCATTAGCTATTACGGGCGGCTAGGTAACAGTTaGCTTGCTTCTCAAGTCCCC | + |
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Preference number: 4 (lower is better) Translates to: SDNLVVSCNKPTTISYYGRLGNS*LASQVP Trigger: GGGGACTTGAGAAGCAAGGCAACTGTTACCTAGCCG...CCCGTAATAGCTAATGGTTGTTGGTTTGTTACAGCTGACCACCAAATTGTCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS-3UTR CCA 90 bp | ACAAGCAAGCACAGGGTCGGTCCTGACTTTGTTTTCTTTGTTTGTGCAGAATGCGTGCGGAATTCATCCTaGGAGAATTCATACTCCGTC | + |
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Preference number: 4 (lower is better) Translates to: TSKHRVGPDFVFFVCAECVRNSS*ENSYSV Trigger: GACGGAGTATGAATTCTCCCAGGATGAATTCCGCAC...GCATTCTGCACAAACAAAGAAAACAAAGTCAGGACCGACCCTGTGCTTGCTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS-3UTR CCA 90 bp | CTGACTTTGTTTTCTTTGTTTGTGCAGAATGCAGACTTGGGCGCCAGACACATCCATAATACTGCAACTTaGGGGTGGACACAATCTCCC | + |
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Preference number: 4 (lower is better) Translates to: LTLFSLFVQNADLGARHIHNTAT*GWTQSP Trigger: GGGAGATTGTGTCCACCCCCAAGTTGCAGTATTATG...GATGTGTCTGGCGCCCAAGTCTGCATTCTGCACAAACAAAGAAAACAAAGTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS-3UTR CCA 90 bp | ACAAGCAAGCACAGGGTCGGTCCTGACTTTGTTTTCTTTGTTTGTGCAGAATGCTTCTCTCCCAGAGCCTaGAGAAGCTGGTCAATAGAA | + |
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Preference number: 4 (lower is better) Translates to: TSKHRVGPDFVFFVCAECFSPRA*RSWSIE Trigger: TTCTATTGACCAGCTTCTCCAGGCTCTGGGAGAGAA...GCATTCTGCACAAACAAAGAAAACAAAGTCAGGACCGACCCTGTGCTTGCTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS-3UTR TCA 90 bp | CTGACTTTGTTTTCTTTGTTTGTGCAGAATGCAGACTTGGGCGCCAGACACATCAACACTGGATTCCACTaGCCTGCAACATTATGTTCG | + |
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Preference number: 4 (lower is better) Translates to: LTLFSLFVQNADLGARHINTGFH*PATLCS Trigger: CGAACATAATGTTGCAGGTCAGTGGAATCCAGTGTT...GATGTGTCTGGCGCCCAAGTCTGCATTCTGCACAAACAAAGAAAACAAAGTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS-3UTR TCA 90 bp | GTCCTGACTTTGTTTTCTTTGTTTGTGCAGAATGCAGACTTGGGCGCCAGACACGACAGTATAATGTTGTaGCTGTTGGCACTGTTCTCT | + |
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Preference number: 4 (lower is better) Translates to: VLTLFSLFVQNADLGARHDSIML*LLALFS Trigger: AGAGAACAGTGCCAACAGTCACAACATTATACTGTC...GTGTCTGGCGCCCAAGTCTGCATTCTGCACAAACAAAGAAAACAAAGTCAGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS-3UTR GCA 90 bp | ATGCAGACTTGGGCGCCAGACACATCGTTTATAGTTAGAAAAACTGGCCTTGAGTTTATGTCCTGTTCCTaGAGTGAGCCGAAGGTCTTT | + |
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Preference number: 4 (lower is better) Translates to: MQTWAPDTSFIVRKTGLEFMSCS*SEPKVF Trigger: AAAGACCTTCGGCTCACTGCAGGAACAGGACATAAA...CTCAAGGCCAGTTTTTCTAACTATAAACGATGTGTCTGGCGCCCAAGTCTGCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS-3UTR GCA 90 bp | ATGCAGACTTGGGCGCCAGACACATCGTTTATAGTTAGAAAAACTGGCCTTGAGTCTTCTGGTAGAGGCTaGATAAACACTGGATTCCAC | + |
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Preference number: 4 (lower is better) Translates to: MQTWAPDTSFIVRKTGLESSGRG*INTGFH Trigger: GTGGAATCCAGTGTTTATGCAGCCTCTACCAGAAGA...CTCAAGGCCAGTTTTTCTAACTATAAACGATGTGTCTGGCGCCCAAGTCTGCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS-3UTR GCA 90 bp | CTGACTTTGTTTTCTTTGTTTGTGCAGAATGCAGACTTGGGCGCCAGACACATCAACTCTACAAGATCCTaGAGTTGGGAGCGTTCACAT | + |
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Preference number: 4 (lower is better) Translates to: LTLFSLFVQNADLGARHINSTRS*SWERSH Trigger: ATGTGAACGCTCCCAACTGCAGGATCTTGTAGAGTT...GATGTGTCTGGCGCCCAAGTCTGCATTCTGCACAAACAAAGAAAACAAAGTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS-3UTR CCA 90 bp | GTTAGCACCACAAGCAAGCACAGGGTCGGTCCTGACTTTGTTTTCTTTGTTTGTTCCGTCACACTTCCTTaGAGCTCATTTTCAACAGCT | + |
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Preference number: 4 (lower is better) Translates to: VSTTSKHRVGPDFVFFVCSVTLP*SSFSTA Trigger: AGCTGTTGAAAATGAGCTCCAAGGAAGTGTGACGGA...ACAAACAAAGAAAACAAAGTCAGGACCGACCCTGTGCTTGCTTGTGGTGCTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS-3UTR CCA 90 bp | CTGACTTTGTTTTCTTTGTTTGTGCAGAATGCAGACTTGGGCGCCAGACACATCCAATTCAATCCAGTTTaGCTTAGAGGGGCTTTGGGT | + |
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Preference number: 4 (lower is better) Translates to: LTLFSLFVQNADLGARHIQFNPV*LRGALG Trigger: ACCCAAAGCCCCTCTAAGCCAAACTGGATTGAATTG...GATGTGTCTGGCGCCCAAGTCTGCATTCTGCACAAACAAAGAAAACAAAGTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS-3UTR CCA 90 bp | AAGGTTGAGAATCATATACAAAAGCAGCTGTTAGAGACGAAGTTTGAAAACCAGCACTGCCCCAGAGGCTaGCTGTACGATCCACGCATA | + |
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Preference number: 4 (lower is better) Translates to: KVENHIQKQLLETKFENQHCPRG*LYDPRI Trigger: TATGCGTGGATCGTACAGCCAGCCTCTGGGGCAGTG...CTGGTTTTCAAACTTCGTCTCTAACAGCTGCTTTTGTATATGATTCTCAACCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS-3UTR CCA 90 bp | GTCGGTCCTGACTTTGTTTTCTTTGTTTGTGCAGAATGCAGACTTGGGCGCCAGATGAACTTCCTGCAATaGCAATCACTGATGGATCAT | + |
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Preference number: 4 (lower is better) Translates to: VGPDFVFFVCAECRLGRQMNFLQ*QSLMDH Trigger: ATGATCCATCAGTGATTGCCATTGCAGGAAGTTCAT...CTGGCGCCCAAGTCTGCATTCTGCACAAACAAAGAAAACAAAGTCAGGACCGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS-3UTR TCA 90 bp | CTGACTTTGTTTTCTTTGTTTGTGCAGAATGCAGACTTGGGCGCCAGACACATCACTGATGGAATTAACTaGGAGTTGCAAGGATCTCTG | + |
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Preference number: 4 (lower is better) Translates to: LTLFSLFVQNADLGARHITDGIN*ELQGSL Trigger: CAGAGATCCTTGCAACTCTCAGTTAATTCCATCAGT...GATGTGTCTGGCGCCCAAGTCTGCATTCTGCACAAACAAAGAAAACAAAGTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS-3UTR TCA 90 bp | AGTGACAATTTGGTGGTCAGCTGTAACAAACCAACAACCATTAGCTATTACGGGTCGACTAGTGTCTCCTaGGAAGTGAACAGGGAAGAA | + |
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Preference number: 4 (lower is better) Translates to: SDNLVVSCNKPTTISYYGSTSVS*EVNREE Trigger: TTCTTCCCTGTTCACTTCTCAGGAGACACTAGTCGA...CCCGTAATAGCTAATGGTTGTTGGTTTGTTACAGCTGACCACCAAATTGTCACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS-3UTR TCA 90 bp | TTGTGCAGAATGCAGACTTGGGCGCCAGACACATCGTTTATAGTTAGAAAAACTACAGATACCCCTTCTTaGGAAGGCACACCATGTTTG | + |
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Preference number: 4 (lower is better) Translates to: LCRMQTWAPDTSFIVRKTTDTPS*EGTPCL Trigger: CAAACATGGTGTGCCTTCTCAAGAAGGGGTATCTGT...AGTTTTTCTAACTATAAACGATGTGTCTGGCGCCCAAGTCTGCATTCTGCACAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS-3UTR TCA 90 bp | AATGAAAGGATACGCAGTGACAATTTGGTGGTCAGCTGTAACAAACCAACAACCCATGGACGGGGTTTCTaGTCTCTTGCAGTTTACTAC | + |
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Preference number: 4 (lower is better) Translates to: NERIRSDNLVVSCNKPTTHGRGF*SLAVYY Trigger: GTAGTAAACTGCAAGAGATCAGAAACCCCGTCCATG...GGTTGTTGGTTTGTTACAGCTGACCACCAAATTGTCACTGCGTATCCTTTCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS-3UTR TCA 90 bp | TCGGTCCTGACTTTGTTTTCTTTGTTTGTGCAGAATGCAGACTTGGGCGCCAGATGCTTCAGTAATTGCTaGTGTAGCAAGCTGAATAAC | + |
|
Preference number: 4 (lower is better) Translates to: SVLTLFSLFVQNADLGARCFSNC*CSKLNN Trigger: GTTATTCAGCTTGCTACATCAGCAATTACTGAAGCA...TCTGGCGCCCAAGTCTGCATTCTGCACAAACAAAGAAAACAAAGTCAGGACCGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS-3UTR TCA 90 bp | ACAAGCAAGCACAGGGTCGGTCCTGACTTTGTTTTCTTTGTTTGTGCAGAATGCGTTCTTAAAGTAGCCTaGCTTTTCCAGTCATCACCT | + |
|
Preference number: 4 (lower is better) Translates to: TSKHRVGPDFVFFVCAECVLKVA*LFQSSP Trigger: AGGTGATGACTGGAAAAGTCAGGCTACTTTAAGAAC...GCATTCTGCACAAACAAAGAAAACAAAGTCAGGACCGACCCTGTGCTTGCTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
||
| CDS-3UTR TCA 90 bp | ACAAGCAAGCACAGGGTCGGTCCTGACTTTGTTTTCTTTGTTTGTGCAGAATGCCACAGCTCTAGCACGTaGTTCAATTATTCCTACAAC | + |
|
Preference number: 4 (lower is better) Translates to: TSKHRVGPDFVFFVCAECHSSST*FNYSYN Trigger: GTTGTAGGAATAATTGAATCACGTGCTAGAGCTGTG...GCATTCTGCACAAACAAAGAAAACAAAGTCAGGACCGACCCTGTGCTTGCTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
||
| CDS-3UTR TCA 90 bp | GTTAGCACCACAAGCAAGCACAGGGTCGGTCCTGACTTTGTTTTCTTTGTTTGTGGAAGAGTAAAAGTCTaGCAGAGTGATATGGCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: VSTTSKHRVGPDFVFFVCGRVKV*QSDMAV Trigger: TACTGCCATATCACTCTGTCAGACTTTTACTCTTCC...ACAAACAAAGAAAACAAAGTCAGGACCGACCCTGTGCTTGCTTGTGGTGCTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
||
| CDS-3UTR GCA 90 bp | TCGGTCCTGACTTTGTTTTCTTTGTTTGTGCAGAATGCAGACTTGGGCGCCAGATGGATTCCACTGACCTaGAACATTATGTTCGAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: SVLTLFSLFVQNADLGARWIPLT*NIMFEV Trigger: AACTTCGAACATAATGTTGCAGGTCAGTGGAATCCA...TCTGGCGCCCAAGTCTGCATTCTGCACAAACAAAGAAAACAAAGTCAGGACCGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
||
| CDS-3UTR GCA 90 bp | CTGACTTTGTTTTCTTTGTTTGTGCAGAATGCAGACTTGGGCGCCAGACACATCTGCCAAGCACTGACTTaGCCACTTAATGAGGTAATA | + |
|
Preference number: 4 (lower is better) Translates to: LTLFSLFVQNADLGARHICQALT*PLNEVI Trigger: TATTACCTCATTAAGTGGGCAAGTCAGTGCTTGGCA...GATGTGTCTGGCGCCCAAGTCTGCATTCTGCACAAACAAAGAAAACAAAGTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
||
| CDS-3UTR GCA 90 bp | GTCGGTCCTGACTTTGTTTTCTTTGTTTGTGCAGAATGCAGACTTGGGCGCCAGCAAATAACCAGTAACTaGAGTAATCATTTCAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VGPDFVFFVCAECRLGRQQITSN*SNHFRP Trigger: TGGCCTGAAATGATTACTGCAGTTACTGGTTATTTG...CTGGCGCCCAAGTCTGCATTCTGCACAAACAAAGAAAACAAAGTCAGGACCGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
||
| CDS-3UTR CCA 90 bp | TTGTGCAGAATGCAGACTTGGGCGCCAGACACATCGTTTATAGTTAGAAAAACTAGGCTGCATAAACACTaGATTCCACTGACCTGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: LCRMQTWAPDTSFIVRKTRLHKH*IPLTCN Trigger: GTTGCAGGTCAGTGGAATCCAGTGTTTATGCAGCCT...AGTTTTTCTAACTATAAACGATGTGTCTGGCGCCCAAGTCTGCATTCTGCACAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
||
| CDS-3UTR TCA 90 bp | TCGGTCCTGACTTTGTTTTCTTTGTTTGTGCAGAATGCAGACTTGGGCGCCAGAAGTTGCAAGGATCTCTaGAATCAACTTTTCCAATGT | + |
|
Preference number: 4 (lower is better) Translates to: SVLTLFSLFVQNADLGARSCKDL*NQLFQC Trigger: ACATTGGAAAAGTTGATTTCAGAGATCCTTGCAACT...TCTGGCGCCCAAGTCTGCATTCTGCACAAACAAAGAAAACAAAGTCAGGACCGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
||
| CDS-3UTR TCA 90 bp | GTTAGCACCACAAGCAAGCACAGGGTCGGTCCTGACTTTGTTTTCTTTGTTTGTAAAAGTCTGACAGAGTaGTATGGCAGTATCAAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: VSTTSKHRVGPDFVFFVCKSLTE*YGSIKE Trigger: CTCTTTGATACTGCCATATCACTCTGTCAGACTTTT...ACAAACAAAGAAAACAAAGTCAGGACCGACCCTGTGCTTGCTTGTGGTGCTAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
||
| CDS-3UTR TCA 90 bp | AAGGTTGAGAATCATATACAAAAGCAGCTGTTAGAGACGAAGTTTGAAAACCAGATGACAGACGACAGCTaGTTGGTTGCTAGCCAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: KVENHIQKQLLETKFENQMTDDS*LVASQD Trigger: GTCCTGGCTAGCAACCAATCAGCTGTCGTCTGTCAT...CTGGTTTTCAAACTTCGTCTCTAACAGCTGCTTTTGTATATGATTCTCAACCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
||
| CDS-3UTR GCA 90 bp | AAGGTTGAGAATCATATACAAAAGCAGCTGTTAGAGACGAAGTTTGAAAACCAGTGGTTCTCAGCATCATaGCACAGGGCCCAGATATCC | + |
|
Preference number: 4 (lower is better) Translates to: KVENHIQKQLLETKFENQWFSAS*HRAQIS Trigger: GGATATCTGGGCCCTGTGGCATGATGCTGAGAACCA...CTGGTTTTCAAACTTCGTCTCTAACAGCTGCTTTTGTATATGATTCTCAACCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
||
| CDS-3UTR GCA 90 bp | AATGAAAGGATACGCAGTGACAATTTGGTGGTCAGCTGTAACAAACCAACAACCCAATATATCCTGCTGTaGTACTACCATAGAGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: NERIRSDNLVVSCNKPTTQYILL*YYHRAG Trigger: CCCAGCTCTATGGTAGTAGCACAGCAGGATATATTG...GGTTGTTGGTTTGTTACAGCTGACCACCAAATTGTCACTGCGTATCCTTTCATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS-3UTR GCA 90 bp | AATGAAAGGATACGCAGTGACAATTTGGTGGTCAGCTGTAACAAACCAACAACCTTTGCCCACTTCAGATaGTGCCTGACAGAAACATTC | + |
|
Preference number: 4 (lower is better) Translates to: NERIRSDNLVVSCNKPTTFAHFR*CLTETF Trigger: GAATGTTTCTGTCAGGCAGCATCTGAAGTGGGCAAA...GGTTGTTGGTTTGTTACAGCTGACCACCAAATTGTCACTGCGTATCCTTTCATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
||
| CDS-3UTR GCA 90 bp | AAGGTTGAGAATCATATACAAAAGCAGCTGTTAGAGACGAAGTTTGAAAACCAGATTCCGCTTAGGAGATaGTCCAGGGCGATCAGACAC | + |
|
Preference number: 4 (lower is better) Translates to: KVENHIQKQLLETKFENQIPLRR*SRAIRH Trigger: GTGTCTGATCGCCCTGGAGCATCTCCTAAGCGGAAT...CTGGTTTTCAAACTTCGTCTCTAACAGCTGCTTTTGTATATGATTCTCAACCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS-3UTR GCA 90 bp | AAGGTTGAGAATCATATACAAAAGCAGCTGTTAGAGACGAAGTTTGAAAACCAGATCACTGATGGATCATaGCGAGCCAACGTGAGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: KVENHIQKQLLETKFENQITDGS*RANVRR Trigger: TCGCCTCACGTTGGCTCGGCATGATCCATCAGTGAT...CTGGTTTTCAAACTTCGTCTCTAACAGCTGCTTTTGTATATGATTCTCAACCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
||
| CDS-3UTR CCA 90 bp | CTGACTTTGTTTTCTTTGTTTGTGCAGAATGCAGACTTGGGCGCCAGACACATCATTTATGAAGTGTCCTaGTGTAAAAAGGCTCCGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LTLFSLFVQNADLGARHIIYEVS*CKKAPQ Trigger: TTGCGGAGCCTTTTTACACCAGGACACTTCATAAAT...GATGTGTCTGGCGCCCAAGTCTGCATTCTGCACAAACAAAGAAAACAAAGTCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS-3UTR GCA 90 bp | AATGAAAGGATACGCAGTGACAATTTGGTGGTCAGCTGTAACAAACCAACAACCGGTTTCCATCAAAACTaGCATGTCCATGGTAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: NERIRSDNLVVSCNKPTTGFHQN*HVHGNR Trigger: TCTGTTACCATGGACATGGCAGTTTTGATGGAAACC...GGTTGTTGGTTTGTTACAGCTGACCACCAAATTGTCACTGCGTATCCTTTCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
||
| CDS-3UTR GCA 90 bp | CTGACTTTGTTTTCTTTGTTTGTGCAGAATGCAGACTTGGGCGCCAGACACATCGGGTTTCTGATCTCTTaGAGTTTACTACAAATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LTLFSLFVQNADLGARHIGFLIS*SLLQMS Trigger: AGACATTTGTAGTAAACTGCAAGAGATCAGAAACCC...GATGTGTCTGGCGCCCAAGTCTGCATTCTGCACAAACAAAGAAAACAAAGTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS-3UTR CCA 90 bp | GTTAGCACCACAAGCAAGCACAGGGTCGGTCCTGACTTTGTTTTCTTTGTTTGTTGCAATTGTACATACTaGCAATTCCCCATCAAACAT | + |
|
Preference number: 4 (lower is better) Translates to: VSTTSKHRVGPDFVFFVCCNCTY*QFPIKH Trigger: ATGTTTGATGGGGAATTGCCAGTATGTACAATTGCA...ACAAACAAAGAAAACAAAGTCAGGACCGACCCTGTGCTTGCTTGTGGTGCTAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
||
| CDS-3UTR TCA 90 bp | ATTTGGTGGTCAGCTGTAACAAACCAACAACCATTAGCTATTACGGGAAGTGAAGGCAGGAGATATAAATaGTCTACTAAGGAAGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: IWWSAVTNQQPLAITGSEGRRYK*STKEDG Trigger: GCCATCTTCCTTAGTAGATCATTTATATCTCCTGCC...TTCACTTCCCGTAATAGCTAATGGTTGTTGGTTTGTTACAGCTGACCACCAAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS-3UTR TCA 90 bp | TTGTGCAGAATGCAGACTTGGGCGCCAGACACATCGTTTATAGTTAGAAAAACTAACTCCATAATTGTCTaGGGGCTAGATACCAGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: LCRMQTWAPDTSFIVRKTNSIIV*GLDTSL Trigger: TAAACTGGTATCTAGCCCTCAGACAATTATGGAGTT...AGTTTTTCTAACTATAAACGATGTGTCTGGCGCCCAAGTCTGCATTCTGCACAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS-3UTR GCA 90 bp | TTGTGCAGAATGCAGACTTGGGCGCCAGACACATCGTTTATAGTTAGAAAAACTAGATCAGGAATCGAGTaGTGGCAATTTTATACACAC | + |
|
Preference number: 4 (lower is better) Translates to: LCRMQTWAPDTSFIVRKTRSGIE*WQFYTH Trigger: GTGTGTATAAAATTGCCAGCACTCGATTCCTGATCT...AGTTTTTCTAACTATAAACGATGTGTCTGGCGCCCAAGTCTGCATTCTGCACAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS-3UTR GCA 90 bp | ATTTGGTGGTCAGCTGTAACAAACCAACAACCATTAGCTATTACGGGAAGTGAAAGCCTTGTTAATAGCTaGTGCAAGATCAAGAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: IWWSAVTNQQPLAITGSESLVNS*CKIKRS Trigger: AGACCTCTTGATCTTGCAGCAGCTATTAACAAGGCT...TTCACTTCCCGTAATAGCTAATGGTTGTTGGTTTGTTACAGCTGACCACCAAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS-3UTR GCA 90 bp | AATGAAAGGATACGCAGTGACAATTTGGTGGTCAGCTGTAACAAACCAACAACCCTAAAAATTCTTCTTTaGCCACTTCAGATGCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: NERIRSDNLVVSCNKPTTLKILL*PLQMLP Trigger: AGGCAGCATCTGAAGTGGGCAAAGAAGAATTTTTAG...GGTTGTTGGTTTGTTACAGCTGACCACCAAATTGTCACTGCGTATCCTTTCATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS-3UTR GCA 90 bp | TTGTGCAGAATGCAGACTTGGGCGCCAGACACATCGTTTATAGTTAGAAAAACTGCTTCTCCTCCAAACTaGAACTTAATGCACTTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LCRMQTWAPDTSFIVRKTASPPN*NLMHLK Trigger: TTTCAAGTGCATTAAGTTGCAGTTTGGAGGAGAAGC...AGTTTTTCTAACTATAAACGATGTGTCTGGCGCCCAAGTCTGCATTCTGCACAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS-3UTR GCA 90 bp | ATTTGGTGGTCAGCTGTAACAAACCAACAACCATTAGCTATTACGGGAAGTGAAACACACAATATATCCTaGTGTGCTACTACCATAGAG | + |
|
Preference number: 4 (lower is better) Translates to: IWWSAVTNQQPLAITGSETHNIS*CATTIE Trigger: CTCTATGGTAGTAGCACAGCAGGATATATTGTGTGT...TTCACTTCCCGTAATAGCTAATGGTTGTTGGTTTGTTACAGCTGACCACCAAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS-3UTR TCA 90 bp | AAGGTTGAGAATCATATACAAAAGCAGCTGTTAGAGACGAAGTTTGAAAACCAGATTTCTCTGGGGTCTTaGTCGTCTCTGATGACAATT | + |
|
Preference number: 4 (lower is better) Translates to: KVENHIQKQLLETKFENQISLGS*SSLMTI Trigger: AATTGTCATCAGAGACGATCAAGACCCCAGAGAAAT...CTGGTTTTCAAACTTCGTCTCTAACAGCTGCTTTTGTATATGATTCTCAACCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS-3UTR CCA 90 bp | AAGGTTGAGAATCATATACAAAAGCAGCTGTTAGAGACGAAGTTTGAAAACCAGGAACTGTCCTCGTTTTaGAGCATGCATATATATTCC | + |
|
Preference number: 4 (lower is better) Translates to: KVENHIQKQLLETKFENQELSSF*SMHIYS Trigger: GGAATATATATGCATGCTCCAAAACGAGGACAGTTC...CTGGTTTTCAAACTTCGTCTCTAACAGCTGCTTTTGTATATGATTCTCAACCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS-3UTR CCA 90 bp | AAGGTTGAGAATCATATACAAAAGCAGCTGTTAGAGACGAAGTTTGAAAACCAGGCAAGTTGTAACAACTaGTTTCCATCAAAACTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KVENHIQKQLLETKFENQASCNN*FPSKLP Trigger: TGGCAGTTTTGATGGAAACCAGTTGTTACAACTTGC...CTGGTTTTCAAACTTCGTCTCTAACAGCTGCTTTTGTATATGATTCTCAACCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS GCA 90 bp | GGTTGGGGCAGCTGTGCACTCGCCATCATGATTCCGCTTAGGAGATaGTCCAGGGCGATCAGACACTGCCCCAGAGGCTGGCTGTACGAT | + |
|
Preference number: 5 (lower is better) Translates to: GWGSCALAIMIPLRR*SRAIRHCPRGWLYD Trigger: ATCGTACAGCCAGCCTCTGGGGCAGTGTCTGATCGCCCTGGAGCATCTCCTAAGCGGAATCATGATGGCGAGTGCACAGCTGCCCCAACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS GCA 90 bp | GCGGCACTTGCAGTCCCAATGTCGCAGACTGTGAATTCCCGAAAGTaGCTGGGCCTTTCGCGTTCAGCTCCGCTCAGTTCCACGAAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: AALAVPMSQTVNSRK*LGLSRSAPLSSTKL Trigger: GAGCTTCGTGGAACTGAGCGGAGCTGAACGCGAAAGGCCCAGGCACTTTCGGGAATTCACAGTCTGCGACATTGGGACTGCAAGTGCCGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS TCA 90 bp | TCACCGTTCCAAACGCGGCACTTGCAGTCCCAATGTCGCAGACTGTaGATTCCCGAAAGTGCCTGGGCCTTTCGCGTTCAGCTCCGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SPFQTRHLQSQCRRL*IPESAWAFRVQLRS Trigger: TGAGCGGAGCTGAACGCGAAAGGCCCAGGCACTTTCGGGAATTCACAGTCTGCGACATTGGGACTGCAAGTGCCGCGTTTGGAACGGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
||
| CDS GCA 90 bp | GCCACCAGCGCTCTCACTGTACTTCACCGTTCCAAACGCGGCACTTaGAGTCCCAATGTCGCAGACTGTGAATTCCCGAAAGTGCCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: ATSALTVLHRSKRGT*SPNVADCEFPKVPG Trigger: CCCAGGCACTTTCGGGAATTCACAGTCTGCGACATTGGGACTGCAAGTGCCGCGTTTGGAACGGTGAAGTACAGTGAGAGCGCTGGTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS TCA 90 bp | ATTTCAATTTGCCGATTGGTTGGGGCAGCTGTGCACTCGCCATCATaGTTCCGCTTAGGAGATGCTCCAGGGCGATCAGACACTGCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: ISICRLVGAAVHSPS*FRLGDAPGRSDTAP Trigger: TGGGGCAGTGTCTGATCGCCCTGGAGCATCTCCTAAGCGGAATCATGATGGCGAGTGCACAGCTGCCCCAACCAATCGGCAAATTGAAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
||
| CDS TCA 90 bp | TCATCTGTAGCACTGGACTCCTTGGTGGTGATGACAGACGACAGCTaGTTGGTTGCTAGCCAGGACCACGCTTCTCCTTGTGCTGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SSVALDSLVVMTDDS*LVASQDHASPCAAS Trigger: AGAAGCAGCACAAGGAGAAGCGTGGTCCTGGCTAGCAACCAATCAGCTGTCGTCTGTCATCACCACCAAGGAGTCCAGTGCTACAGATGA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
||
| CDS GCA 90 bp | AGACTCCAGTGTGTCAACGGGGACATCAGTTGCCAAGCACTGACTTaGCCACTTAATGAGGTAATAAGACAAGAGCAGGGGAGCTGTGCG | + |
|
Preference number: 5 (lower is better) Translates to: RLQCVNGDISCQALT*PLNEVIRQEQGSCA Trigger: CGCACAGCTCCCCTGCTCTTGTCTTATTACCTCATTAAGTGGGCAAGTCAGTGCTTGGCAACTGATGTCCCCGTTGACACACTGGAGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
||
| CDS GCA 90 bp | GGTGGGAGAGGGCTTCCTGATACTGGAGAACGCAGGCATAGAACTTaGACCAGAATTCCTGTTGTAAAGTGCGGAATTCATCCTGGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: GGRGLPDTGERRHRT*TRIPVVKCGIHPGR Trigger: TCTCCCAGGATGAATTCCGCACTTTACAACAGGAATTCTGGTGCAAGTTCTATGCCTGCGTTCTCCAGTATCAGGAAGCCCTCTCCCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
||
| CDS GCA 90 bp | CCAGCTCCTAAGATCACTGCATCTCCTAGCCTTGTTAATAGCTGCTaGAAGATCAAGAGGTCTCGGCAGATCAGGAATCGAGTGCTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: PAPKITASPSLVNSC*KIKRSRQIRNRVLA Trigger: TGCCAGCACTCGATTCCTGATCTGCCGAGACCTCTTGATCTTGCAGCAGCTATTAACAAGGCTAGGAGATGCAGTGATCTTAGGAGCTGG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
||
| CDS GCA 90 bp | GTTCACATAGAACCACCACCAGCTGTCGCAAACAGTCTAACTGCCTaGTGGAGTCCGGAATTTGGGTCAAGGCCTCATATGCTTGGCTAT | + |
|
Preference number: 5 (lower is better) Translates to: VHIEPPPAVANSLTA*WSPEFGSRPHMLGY Trigger: ATAGCCAAGCATATGAGGCCTTGACCCAAATTCCGGACTCCAGCAGGCAGTTAGACTGTTTGCGACAGCTGGTGGTGGTTCTATGTGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
||
| CDS CCA 90 bp | CACATAGAACCACCACCAGCTGTCGCAAACAGTCTAACTGCCTGCTaGAGTCCGGAATTTGGGTCAAGGCCTCATATGCTTGGCTATTAT | + |
|
Preference number: 5 (lower is better) Translates to: HIEPPPAVANSLTAC*SPEFGSRPHMLGYY Trigger: ATAATAGCCAAGCATATGAGGCCTTGACCCAAATTCCGGACTCCAGCAGGCAGTTAGACTGTTTGCGACAGCTGGTGGTGGTTCTATGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
||
| CDS-3UTR CAA 90 bp | ATGCAGACTTGGGCGCCAGACACATCGTTTATAGTTAGAAAAACTGGCCTTGAGTTCCAAACGCGGCACTaGCAGTCCCAATGTCGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: MQTWAPDTSFIVRKTGLEFQTRH*QSQCRR Trigger: TCTGCGACATTGGGACTGCAAGTGCCGCGTTTGGAA...CTCAAGGCCAGTTTTTCTAACTATAAACGATGTGTCTGGCGCCCAAGTCTGCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
||
| CDS CCA 90 bp | GCTGCTGCAAGATCAAGAGGTCTCGGCAGATCAGGAATCGAGTGCTaGCAATTTTATACACACCTCGACACACAATATATCCTGCTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: AAARSRGLGRSGIEC*QFYTHLDTQYILLC Trigger: GCACAGCAGGATATATTGTGTGTCGAGGTGTGTATAAAATTGCCAGCACTCGATTCCTGATCTGCCGAGACCTCTTGATCTTGCAGCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
||
| CDS TCA 90 bp | GACGTGGTGGAACCCGGGGACAGCCCAGGTACTGATGGAATTAACTaGGAGTTGCAAGGATCTCTGAAATCAACTTTTCCAATGTCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: DVVEPGDSPGTDGIN*ELQGSLKSTFPMSV Trigger: TACTGACATTGGAAAAGTTGATTTCAGAGATCCTTGCAACTCTCAGTTAATTCCATCAGTACCTGGGCTGTCCCCGGGTTCCACCACGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
||
| CDS TCA 90 bp | ATCAAGCGATCTAAAAATTCTTCTTTGCCCACTTCAGATGCTGCCTaGCAGAAACATTCCAGAGCCTTCTGCACTTCCCCCGTAACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: IKRSKNSSLPTSDAA*QKHSRAFCTSPVTR Trigger: CCTGGTTACGGGGGAAGTGCAGAAGGCTCTGGAATGTTTCTGTCAGGCAGCATCTGAAGTGGGCAAAGAAGAATTTTTAGATCGCTTGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
||
| CDS-3UTR CAA 90 bp | AGTGACAATTTGGTGGTCAGCTGTAACAAACCAACAACCATTAGCTATTACGGGCAGGTCTTGCTGAGCTaGAAAGAGCTGACCAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SDNLVVSCNKPTTISYYGQVLLS*KELTSS Trigger: GGAGCTGGTCAGCTCTTTCAAGCTCAGCAAGACCTG...CCCGTAATAGCTAATGGTTGTTGGTTTGTTACAGCTGACCACCAAATTGTCACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS TCA 90 bp | TGGAAGGAGAATACGCAAGCCGTAATTTATGTCCTGTTCCTGCAGTaGGCCGAAGGTCTTTGTTTACAGGGACATATTCCAGCATGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: WKENTQAVIYVLFLQ*AEGLCLQGHIPACQ Trigger: CTGACATGCTGGAATATGTCCCTGTAAACAAAGACCTTCGGCTCACTGCAGGAACAGGACATAAATTACGGCTTGCGTATTCTCCTTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS TCA 90 bp | GTCTCATCCTCTGTCAAAAGGTGCTCATCGGGCAGGAGATATAAATaGTCTACTAAGGAAGATGGCACCAGGAAAGACAGATACCCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: VSSSVKRCSSGRRYK*STKEDGTRKDRYPF Trigger: GAAGGGGTATCTGTCTTTCCTGGTGCCATCTTCCTTAGTAGATCATTTATATCTCCTGCCCGATGAGCACCTTTTGACAGAGGATGAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS TCA 90 bp | AACTTCCTGCAATGGCAATCACTGATGGATCATGCCGAGCCAACGTaGGGCGAATGCGAGCTAAAGAATATTCTTTCTCGAGATCTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: NFLQWQSLMDHAEPT*GECELKNILSRDLP Trigger: TGGAAGATCTCGAGAAAGAATATTCTTTAGCTCGCATTCGCCTCACGTTGGCTCGGCATGATCCATCAGTGATTGCCATTGCAGGAAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS GCA 90 bp | GGAGAACGCAGGCATAGAACTTGCACCAGAATTCCTGTTGTAAAGTaGGGAATTCATCCTGGGAGAATTCATACTCCGTCACACTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: GERRHRTCTRIPVVK*GIHPGRIHTPSHFL Trigger: AAGGAAGTGTGACGGAGTATGAATTCTCCCAGGATGAATTCCGCACTTTACAACAGGAATTCTGGTGCAAGTTCTATGCCTGCGTTCTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS GCA 90 bp | ATAGCTGCTGCAAGATCAAGAGGTCTCGGCAGATCAGGAATCGAGTaGTGGCAATTTTATACACACCTCGACACACAATATATCCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: IAAARSRGLGRSGIE*WQFYTHLDTQYILL Trigger: CAGCAGGATATATTGTGTGTCGAGGTGTGTATAAAATTGCCAGCACTCGATTCCTGATCTGCCGAGACCTCTTGATCTTGCAGCAGCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS GCA 90 bp | AACAGTTGCCTTGCTTCTCAAGTCCCCGAAGAGTTCGTACCTCTCTaGCAAGACGCATACCATATTCAAACATCACTGTACCAGCTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: NSCLASQVPEEFVPL*QDAYHIQTSLYQLF Trigger: GAAAAGCTGGTACAGTGATGTTTGAATATGGTATGCGTCTTGGCAGAGAGGTACGAACTCTTCGGGGACTTGAGAAGCAAGGCAACTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS GCA 90 bp | TCCTTTGCTGATGAACTTCCTGCAATGGCAATCACTGATGGATCATaGCGAGCCAACGTGAGGCGAATGCGAGCTAAAGAATATTCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: SFADELPAMAITDGS*RANVRRMRAKEYSF Trigger: GAAAGAATATTCTTTAGCTCGCATTCGCCTCACGTTGGCTCGGCATGATCCATCAGTGATTGCCATTGCAGGAAGTTCATCAGCAAAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS CCA 90 bp | GTCCTCGTTTTGGAGCATGCATATATATTCCTAGGTAGAGCCCCATaGAAGGAGAATACGCAAGCCGTAATTTATGTCCTGTTCCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: VLVLEHAYIFLGRAP*KENTQAVIYVLFLQ Trigger: CTGCAGGAACAGGACATAAATTACGGCTTGCGTATTCTCCTTCCATGGGGCTCTACCTAGGAATATATATGCATGCTCCAAAACGAGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
||
| CDS-3UTR CAA 90 bp | ATTTGGTGGTCAGCTGTAACAAACCAACAACCATTAGCTATTACGGGAAGTGAAGCTGGAGTCCGGAATTaGGGTCAAGGCCTCATATGC | + |
|
Preference number: 5 (lower is better) Translates to: IWWSAVTNQQPLAITGSEAGVRN*GQGLIC Trigger: GCATATGAGGCCTTGACCCAAATTCCGGACTCCAGC...TTCACTTCCCGTAATAGCTAATGGTTGTTGGTTTGTTACAGCTGACCACCAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS-3UTR CAA 90 bp | ATTTGGTGGTCAGCTGTAACAAACCAACAACCATTAGCTATTACGGGAAGTGAAGGACCACGCTTCTCCTaGTGCTGCTTCTCCTCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: IWWSAVTNQQPLAITGSEGPRFS*CCFSSK Trigger: TTTGGAGGAGAAGCAGCACAAGGAGAAGCGTGGTCC...TTCACTTCCCGTAATAGCTAATGGTTGTTGGTTTGTTACAGCTGACCACCAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS-3UTR CAA 90 bp | AGTGACAATTTGGTGGTCAGCTGTAACAAACCAACAACCATTAGCTATTACGGGGGGCCCAGATATCCGTaGAGGTTAAGGCAAAATCGA | + |
|
Preference number: 5 (lower is better) Translates to: SDNLVVSCNKPTTISYYGGPRYP*RLRQNR Trigger: TCGATTTTGCCTTAACCTCAACGGATATCTGGGCCC...CCCGTAATAGCTAATGGTTGTTGGTTTGTTACAGCTGACCACCAAATTGTCACT 46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
||
| CDS-3UTR CAA 90 bp | AGTGACAATTTGGTGGTCAGCTGTAACAAACCAACAACCATTAGCTATTACGGGCTCCGTCACACTTCCTaGGAGCTCATTTTCAACAGC | + |
|
Preference number: 5 (lower is better) Translates to: SDNLVVSCNKPTTISYYGLRHTS*ELIFNS Trigger: GCTGTTGAAAATGAGCTCCAAGGAAGTGTGACGGAG...CCCGTAATAGCTAATGGTTGTTGGTTTGTTACAGCTGACCACCAAATTGTCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS-3UTR CAA 90 bp | TCGGTCCTGACTTTGTTTTCTTTGTTTGTGCAGAATGCAGACTTGGGCGCCAGAACAGTAAATCTCGCGTaGCCTTGTCAACTTTTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: SVLTLFSLFVQNADLGARTVNLA*PCQLFA Trigger: AGCAAAAAGTTGACAAGGCAACGCGAGATTTACTGT...TCTGGCGCCCAAGTCTGCATTCTGCACAAACAAAGAAAACAAAGTCAGGACCGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS-3UTR CAA 90 bp | TCGGTCCTGACTTTGTTTTCTTTGTTTGTGCAGAATGCAGACTTGGGCGCCAGAAGAACTGTCCTCGTTTaGGAGCATGCATATATATTC | + |
|
Preference number: 5 (lower is better) Translates to: SVLTLFSLFVQNADLGARRTVLV*EHAYIF Trigger: GAATATATATGCATGCTCCAAAACGAGGACAGTTCT...TCTGGCGCCCAAGTCTGCATTCTGCACAAACAAAGAAAACAAAGTCAGGACCGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS-3UTR CAA 90 bp | AATGAAAGGATACGCAGTGACAATTTGGTGGTCAGCTGTAACAAACCAACAACCGACAGATACCCCTTCTaGAGAAGGCACACCATGTTT | + |
|
Preference number: 5 (lower is better) Translates to: NERIRSDNLVVSCNKPTTDRYPF*RRHTMF Trigger: AAACATGGTGTGCCTTCTCAAGAAGGGGTATCTGTC...GGTTGTTGGTTTGTTACAGCTGACCACCAAATTGTCACTGCGTATCCTTTCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS-3UTR CAA 90 bp | ATGCAGACTTGGGCGCCAGACACATCGTTTATAGTTAGAAAAACTGGCCTTGAGGGGGTTTCTGATCTCTaGCAGTTTACTACAAATGTC | + |
|
Preference number: 5 (lower is better) Translates to: MQTWAPDTSFIVRKTGLEGVSDL*QFTTNV Trigger: GACATTTGTAGTAAACTGCAAGAGATCAGAAACCCC...CTCAAGGCCAGTTTTTCTAACTATAAACGATGTGTCTGGCGCCCAAGTCTGCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS-3UTR CAA 90 bp | CTGACTTTGTTTTCTTTGTTTGTGCAGAATGCAGACTTGGGCGCCAGACACATCTGCAACTTAATGCACTaGAAAGCAAGCCCTTCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: LTLFSLFVQNADLGARHICNLMH*KASPSK Trigger: CTTTGAAGGGCTTGCTTTCAAGTGCATTAAGTTGCA...GATGTGTCTGGCGCCCAAGTCTGCATTCTGCACAAACAAAGAAAACAAAGTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS GCA 90 bp | TCGAGTGCTGGCAATTTTATACACACCTCGACACACAATATATCCTaGTGTGCTACTACCATAGAGCTGGGAAAGATTCATTCGAACGTT | + |
|
Preference number: 5 (lower is better) Translates to: SSAGNFIHTSTHNIS*CATTIELGKIHSNV Trigger: AACGTTCGAATGAATCTTTCCCAGCTCTATGGTAGTAGCACAGCAGGATATATTGTGTGTCGAGGTGTGTATAAAATTGCCAGCACTCGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS CCA 90 bp | ACCATAGAGCTGGGAAAGATTCATTCGAACGTTCAAAGGCTGAGCTaGATCGAACCCCTTTTCCATTTCCACTTCTGTTTCATAATCCAT | + |
|
Preference number: 5 (lower is better) Translates to: TIELGKIHSNVQRLS*IEPLFHFHFCFIIH Trigger: ATGGATTATGAAACAGAAGTGGAAATGGAAAAGGGGTTCGATCCAGCTCAGCCTTTGAACGTTCGAATGAATCTTTCCCAGCTCTATGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS-3UTR CAA 90 bp | TTGTGCAGAATGCAGACTTGGGCGCCAGACACATCGTTTATAGTTAGAAAAACTCATTTCTCTGGGGTCTaGATCGTCTCTGATGACAAT | + |
|
Preference number: 5 (lower is better) Translates to: LCRMQTWAPDTSFIVRKTHFSGV*IVSDDN Trigger: ATTGTCATCAGAGACGATCAAGACCCCAGAGAAATG...AGTTTTTCTAACTATAAACGATGTGTCTGGCGCCCAAGTCTGCATTCTGCACAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS GCA 90 bp | TGTTCGAAGTTGATATATTTCACAATTGTTTGGTTCTCAGCATCATaGCACAGGGCCCAGATATCCGTTGAGGTTAAGGCAAAATCGACT | + |
|
Preference number: 5 (lower is better) Translates to: CSKLIYFTIVWFSAS*HRAQISVEVKAKST Trigger: AGTCGATTTTGCCTTAACCTCAACGGATATCTGGGCCCTGTGGCATGATGCTGAGAACCAAACAATTGTGAAATATATCAACTTCGAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS GCA 90 bp | TGCTGGCAATTTTATACACACCTCGACACACAATATATCCTGCTGTaGTACTACCATAGAGCTGGGAAAGATTCATTCGAACGTTCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: CWQFYTHLDTQYILL*YYHRAGKDSFERSK Trigger: CTTTGAACGTTCGAATGAATCTTTCCCAGCTCTATGGTAGTAGCACAGCAGGATATATTGTGTGTCGAGGTGTGTATAAAATTGCCAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS-3UTR CAA 90 bp | AAGGTTGAGAATCATATACAAAAGCAGCTGTTAGAGACGAAGTTTGAAAACCAGATACCATCGGGGCTGTaGCTGACAGTGGAAACTCAA | + |
|
Preference number: 5 (lower is better) Translates to: KVENHIQKQLLETKFENQIPSGL*LTVETQ Trigger: TTGAGTTTCCACTGTCAGCAACAGCCCCGATGGTAT...CTGGTTTTCAAACTTCGTCTCTAACAGCTGCTTTTGTATATGATTCTCAACCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS TCA 90 bp | TCTCTGAAATCAACTTTTCCAATGTCAGTAAATATGGACTGCATCTaGCTTTCAGTTACCAGCTCACTTCTGTACATACGGGAAGGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: SLKSTFPMSVNMDCI*LSVTSSLLYIREGC Trigger: ACACCCTTCCCGTATGTACAGAAGTGAGCTGGTAACTGAAAGTCAGATGCAGTCCATATTTACTGACATTGGAAAAGTTGATTTCAGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS-3UTR CAA 90 bp | ATTTGGTGGTCAGCTGTAACAAACCAACAACCATTAGCTATTACGGGAAGTGAATCTAAAAATTCTTCTTaGCCCACTTCAGATGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: IWWSAVTNQQPLAITGSESKNSS*PTSDAA Trigger: GGCAGCATCTGAAGTGGGCAAAGAAGAATTTTTAGA...TTCACTTCCCGTAATAGCTAATGGTTGTTGGTTTGTTACAGCTGACCACCAAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS TCA 90 bp | ACAATTTCTTCTTCTGGTAGAGGCTGCATAAACACTGGATTCCACTaGCCTGCAACATTATGTTCGAAGTTGATATATTTCACAATTGTT | + |
|
Preference number: 5 (lower is better) Translates to: TISSSGRGCINTGFH*PATLCSKLIYFTIV Trigger: AACAATTGTGAAATATATCAACTTCGAACATAATGTTGCAGGTCAGTGGAATCCAGTGTTTATGCAGCCTCTACCAGAAGAAGAAATTGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS GCA 72 bp | AGCGAACAGAGCCTCCCCATCGCTGCTAAGCCAGGCTaGAGACGTGGTGGAACCCGGGGACAGCCCAGGTAC | + |
|
Preference number: 6 (lower is better) Translates to: SEQSLPIAAKPG*RRGGTRGQPRY Trigger: GTACCTGGGCTGTCCCCGGGTTCCACCACGTCTGCAGCCTGGCTTAGCAGCGATGGGGAGGCTCTGTTCGCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS GCA 72 bp | AGCTGTGCACTCGCCATCATGATTCCGCTTAGGAGATaGTCCAGGGCGATCAGACACTGCCCCAGAGGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SCALAIMIPLRR*SRAIRHCPRGW Trigger: CCAGCCTCTGGGGCAGTGTCTGATCGCCCTGGAGCATCTCCTAAGCGGAATCATGATGGCGAGTGCACAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS TCA 72 bp | TGCCGATTGGTTGGGGCAGCTGTGCACTCGCCATCATaGTTCCGCTTAGGAGATGCTCCAGGGCGATCAGAC | + |
|
Preference number: 6 (lower is better) Translates to: CRLVGAAVHSPS*FRLGDAPGRSD Trigger: GTCTGATCGCCCTGGAGCATCTCCTAAGCGGAATCATGATGGCGAGTGCACAGCTGCCCCAACCAATCGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS GCA 72 bp | GCAGTCCCAATGTCGCAGACTGTGAATTCCCGAAAGTaGCTGGGCCTTTCGCGTTCAGCTCCGCTCAGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: AVPMSQTVNSRK*LGLSRSAPLSS Trigger: GGAACTGAGCGGAGCTGAACGCGAAAGGCCCAGGCACTTTCGGGAATTCACAGTCTGCGACATTGGGACTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS GCA 72 bp | ATTCCGCTTAGGAGATGCTCCAGGGCGATCAGACACTaGCCCAGAGGCTGGCTGTACGATCCACGCATACTC | + |
|
Preference number: 6 (lower is better) Translates to: IPLRRCSRAIRH*PRGWLYDPRIL Trigger: GAGTATGCGTGGATCGTACAGCCAGCCTCTGGGGCAGTGTCTGATCGCCCTGGAGCATCTCCTAAGCGGAAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS TCA 72 bp | CAAACGCGGCACTTGCAGTCCCAATGTCGCAGACTGTaGATTCCCGAAAGTGCCTGGGCCTTTCGCGTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: QTRHLQSQCRRL*IPESAWAFRVQ Trigger: CTGAACGCGAAAGGCCCAGGCACTTTCGGGAATTCACAGTCTGCGACATTGGGACTGCAAGTGCCGCGTTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS CCA 72 bp | AGATGCTCCAGGGCGATCAGACACTGCCCCAGAGGCTaGCTGTACGATCCACGCATACTCTGGACGAATAAG | + |
|
Preference number: 6 (lower is better) Translates to: RCSRAIRHCPRG*LYDPRILWTNK Trigger: CTTATTCGTCCAGAGTATGCGTGGATCGTACAGCCAGCCTCTGGGGCAGTGTCTGATCGCCCTGGAGCATCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS TCA 72 bp | GCACTGGACTCCTTGGTGGTGATGACAGACGACAGCTaGTTGGTTGCTAGCCAGGACCACGCTTCTCCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: ALDSLVVMTDDS*LVASQDHASPC Trigger: ACAAGGAGAAGCGTGGTCCTGGCTAGCAACCAATCAGCTGTCGTCTGTCATCACCACCAAGGAGTCCAGTGC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS GCA 72 bp | GAACCACCACCAGCTGTCGCAAACAGTCTAACTGCCTaGTGGAGTCCGGAATTTGGGTCAAGGCCTCATATG | + |
|
Preference number: 6 (lower is better) Translates to: EPPPAVANSLTA*WSPEFGSRPHM Trigger: CATATGAGGCCTTGACCCAAATTCCGGACTCCAGCAGGCAGTTAGACTGTTTGCGACAGCTGGTGGTGGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS GCA 72 bp | CATAGAACCACCACCAGCTGTCGCAAACAGTCTAACTaGCTGCTGGAGTCCGGAATTTGGGTCAAGGCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: HRTTTSCRKQSN*LLESGIWVKAS Trigger: TGAGGCCTTGACCCAAATTCCGGACTCCAGCAGGCAGTTAGACTGTTTGCGACAGCTGGTGGTGGTTCTATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS CCA 72 bp | CCACCACCAGCTGTCGCAAACAGTCTAACTGCCTGCTaGAGTCCGGAATTTGGGTCAAGGCCTCATATGCTT | + |
|
Preference number: 6 (lower is better) Translates to: PPPAVANSLTAC*SPEFGSRPHML Trigger: AAGCATATGAGGCCTTGACCCAAATTCCGGACTCCAGCAGGCAGTTAGACTGTTTGCGACAGCTGGTGGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS GCA 72 bp | GCTCTCACTGTACTTCACCGTTCCAAACGCGGCACTTaGAGTCCCAATGTCGCAGACTGTGAATTCCCGAAA | + |
|
Preference number: 6 (lower is better) Translates to: ALTVLHRSKRGT*SPNVADCEFPK Trigger: TTTCGGGAATTCACAGTCTGCGACATTGGGACTGCAAGTGCCGCGTTTGGAACGGTGAAGTACAGTGAGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS CAA 72 bp | GCTGACCAGCTCCTAAGATCACTGCATCTCCTAGCCTaGTTAATAGCTGCTGCAAGATCAAGAGGTCTCGGC | + |
|
Preference number: 6 (lower is better) Translates to: ADQLLRSLHLLA*LIAAARSRGLG Trigger: GCCGAGACCTCTTGATCTTGCAGCAGCTATTAACAAGGCTAGGAGATGCAGTGATCTTAGGAGCTGGTCAGC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS CAA 72 bp | AGAGGCCAGCCTGAACCAAGAGTGCGCTCATCTCCTTaGCTGATGAACTTCCTGCAATGGCAATCACTGATG | + |
|
Preference number: 6 (lower is better) Translates to: RGQPEPRVRSSP*LMNFLQWQSLM Trigger: CATCAGTGATTGCCATTGCAGGAAGTTCATCAGCAAAGGAGATGAGCGCACTCTTGGTTCAGGCTGGCCTCT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
||
| CDS CAA 90 bp | GCAAGCCGTAATTTATGTCCTGTTCCTGCAGTGAGCCGAAGGTCTTaGTTTACAGGGACATATTCCAGCATGTCAGCCACCATCAGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: ASRNLCPVPAVSRRS*FTGTYSSMSATIRH Trigger: GTGCCTGATGGTGGCTGACATGCTGGAATATGTCCCTGTAAACAAAGACCTTCGGCTCACTGCAGGAACAGGACATAAATTACGGCTTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS CAA 90 bp | CAGTATCAAAGAGGCCAGCCTGAACCAAGAGTGCGCTCATCTCCTTaGCTGATGAACTTCCTGCAATGGCAATCACTGATGGATCATGCC | + |
|
Preference number: 6 (lower is better) Translates to: QYQRGQPEPRVRSSP*LMNFLQWQSLMDHA Trigger: GGCATGATCCATCAGTGATTGCCATTGCAGGAAGTTCATCAGCAAAGGAGATGAGCGCACTCTTGGTTCAGGCTGGCCTCTTTGATACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS GCA 72 bp | CTTATAGCTGTGGGCATCCAGCCTGTGAGTAATCGCTaGATCACGGAACTCTGTTTCAGCTCCACAACTGAT | + |
|
Preference number: 6 (lower is better) Translates to: LIAVGIQPVSNR*ITELCFSSTTD Trigger: ATCAGTTGTGGAGCTGAAACAGAGTTCCGTGATGCAGCGATTACTCACAGGCTGGATGCCCACAGCTATAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
||
| CDS GCA 72 bp | GATGAACTTCCTGCAATGGCAATCACTGATGGATCATaGCGAGCCAACGTGAGGCGAATGCGAGCTAAAGAA | + |
|
Preference number: 6 (lower is better) Translates to: DELPAMAITDGS*RANVRRMRAKE Trigger: TTCTTTAGCTCGCATTCGCCTCACGTTGGCTCGGCATGATCCATCAGTGATTGCCATTGCAGGAAGTTCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
||
| CDS TCA 72 bp | CACAGGGCAAAAATAAAGGCATCATGTTCCACACAATaGACAGCGAGACTCAGAGCACGATCAGAAGGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: HRAKIKASCSTQ*TARLRARSEGP Trigger: TGGGCCTTCTGATCGTGCTCTGAGTCTCGCTGTTCATTGTGTGGAACATGATGCCTTTATTTTTGCCCTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
||
| CDS TCA 72 bp | AGAAGAGTATGGGAGCCATACCATCGGGGCTGTTGCTaGCAGTGGAAACTCAATTCCAAAGTACTGATGTCC | + |
|
Preference number: 6 (lower is better) Translates to: RRVWEPYHRGCC*QWKLNSKVLMS Trigger: GGACATCAGTACTTTGGAATTGAGTTTCCACTGTCAGCAACAGCCCCGATGGTATGGCTCCCATACTCTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
||
| CDS TCA 72 bp | GAACCCGGGGACAGCCCAGGTACTGATGGAATTAACTaGGAGTTGCAAGGATCTCTGAAATCAACTTTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: EPGDSPGTDGIN*ELQGSLKSTFP Trigger: TGGAAAAGTTGATTTCAGAGATCCTTGCAACTCTCAGTTAATTCCATCAGTACCTGGGCTGTCCCCGGGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS TCA 72 bp | CAATGGCAATCACTGATGGATCATGCCGAGCCAACGTaGGGCGAATGCGAGCTAAAGAATATTCTTTCTCGA | + |
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Preference number: 6 (lower is better) Translates to: QWQSLMDHAEPT*GECELKNILSR Trigger: TCGAGAAAGAATATTCTTTAGCTCGCATTCGCCTCACGTTGGCTCGGCATGATCCATCAGTGATTGCCATTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS GCA 72 bp | AAGATCACTGCATCTCCTAGCCTTGTTAATAGCTGCTaGAAGATCAAGAGGTCTCGGCAGATCAGGAATCGA | + |
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Preference number: 6 (lower is better) Translates to: KITASPSLVNSC*KIKRSRQIRNR Trigger: TCGATTCCTGATCTGCCGAGACCTCTTGATCTTGCAGCAGCTATTAACAAGGCTAGGAGATGCAGTGATCTT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS GCA 72 bp | CCTAAGATCACTGCATCTCCTAGCCTTGTTAATAGCTaGTGCAAGATCAAGAGGTCTCGGCAGATCAGGAAT | + |
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Preference number: 6 (lower is better) Translates to: PKITASPSLVNS*CKIKRSRQIRN Trigger: ATTCCTGATCTGCCGAGACCTCTTGATCTTGCAGCAGCTATTAACAAGGCTAGGAGATGCAGTGATCTTAGG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS GCA 72 bp | CCTGCTGGAGTCCGGAATTTGGGTCAAGGCCTCATATaGTTGGCTATTATGACCCAAGTCCAAATGATGTTT | + |
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Preference number: 6 (lower is better) Translates to: PAGVRNLGQGLI*LAIMTQVQMMF Trigger: AAACATCATTTGGACTTGGGTCATAATAGCCAAGCATATGAGGCCTTGACCCAAATTCCGGACTCCAGCAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS GCA 72 bp | CTTGCTTCTCAAGTCCCCGAAGAGTTCGTACCTCTCTaGCAAGACGCATACCATATTCAAACATCACTGTAC | + |
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Preference number: 6 (lower is better) Translates to: LASQVPEEFVPL*QDAYHIQTSLY Trigger: GTACAGTGATGTTTGAATATGGTATGCGTCTTGGCAGAGAGGTACGAACTCTTCGGGGACTTGAGAAGCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS GCA 72 bp | TCTTTCTCGAGATCTTCCAATTCCAGAATTTCAATTTaGCGATTGGTTGGGGCAGCTGTGCACTCGCCATCA | + |
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Preference number: 6 (lower is better) Translates to: SFSRSSNSRISI*RLVGAAVHSPS Trigger: TGATGGCGAGTGCACAGCTGCCCCAACCAATCGGCAAATTGAAATTCTGGAATTGGAAGATCTCGAGAAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS CCA 72 bp | CACCAGAATTCCTGTTGTAAAGTGCGGAATTCATCCTaGGAGAATTCATACTCCGTCACACTTCCTTGGAGC | + |
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Preference number: 6 (lower is better) Translates to: HQNSCCKVRNSS*ENSYSVTLPWS Trigger: GCTCCAAGGAAGTGTGACGGAGTATGAATTCTCCCAGGATGAATTCCGCACTTTACAACAGGAATTCTGGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS CAA 72 bp | AATTTATGTCCTGTTCCTGCAGTGAGCCGAAGGTCTTaGTTTACAGGGACATATTCCAGCATGTCAGCCACC | + |
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Preference number: 6 (lower is better) Translates to: NLCPVPAVSRRS*FTGTYSSMSAT Trigger: GGTGGCTGACATGCTGGAATATGTCCCTGTAAACAAAGACCTTCGGCTCACTGCAGGAACAGGACATAAATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS GCA 72 bp | GCAAGATCAAGAGGTCTCGGCAGATCAGGAATCGAGTaGTGGCAATTTTATACACACCTCGACACACAATAT | + |
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Preference number: 6 (lower is better) Translates to: ARSRGLGRSGIE*WQFYTHLDTQY Trigger: ATATTGTGTGTCGAGGTGTGTATAAAATTGCCAGCACTCGATTCCTGATCTGCCGAGACCTCTTGATCTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS CCA 72 bp | CTGGGAAAGATTCATTCGAACGTTCAAAGGCTGAGCTaGATCGAACCCCTTTTCCATTTCCACTTCTGTTTC | + |
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Preference number: 6 (lower is better) Translates to: LGKIHSNVQRLS*IEPLFHFHFCF Trigger: GAAACAGAAGTGGAAATGGAAAAGGGGTTCGATCCAGCTCAGCCTTTGAACGTTCGAATGAATCTTTCCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS CAA 72 bp | GCTGGAGTCCGGAATTTGGGTCAAGGCCTCATATGCTaGGCTATTATGACCCAAGTCCAAATGATGTTTGAA | + |
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Preference number: 6 (lower is better) Translates to: AGVRNLGQGLIC*AIMTQVQMMFE Trigger: TTCAAACATCATTTGGACTTGGGTCATAATAGCCAAGCATATGAGGCCTTGACCCAAATTCCGGACTCCAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS TCA 72 bp | AATACGCAAGCCGTAATTTATGTCCTGTTCCTGCAGTaGGCCGAAGGTCTTTGTTTACAGGGACATATTCCA | + |
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Preference number: 6 (lower is better) Translates to: NTQAVIYVLFLQ*AEGLCLQGHIP Trigger: TGGAATATGTCCCTGTAAACAAAGACCTTCGGCTCACTGCAGGAACAGGACATAAATTACGGCTTGCGTATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS TCA 72 bp | TCTGTCAAAAGGTGCTCATCGGGCAGGAGATATAAATaGTCTACTAAGGAAGATGGCACCAGGAAAGACAGA | + |
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Preference number: 6 (lower is better) Translates to: SVKRCSSGRRYK*STKEDGTRKDR Trigger: TCTGTCTTTCCTGGTGCCATCTTCCTTAGTAGATCATTTATATCTCCTGCCCGATGAGCACCTTTTGACAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS TCA 72 bp | CCTTCAAAGACTGGTGTTAATGGAAGAGTAAAAGTCTaGCAGAGTGATATGGCAGTATCAAAGAGGCCAGCC | + |
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Preference number: 6 (lower is better) Translates to: PSKTGVNGRVKV*QSDMAVSKRPA Trigger: GGCTGGCCTCTTTGATACTGCCATATCACTCTGTCAGACTTTTACTCTTCCATTAACACCAGTCTTTGAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS CCA 72 bp | TTGGAGCATGCATATATATTCCTAGGTAGAGCCCCATaGAAGGAGAATACGCAAGCCGTAATTTATGTCCTG | + |
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Preference number: 6 (lower is better) Translates to: LEHAYIFLGRAP*KENTQAVIYVL Trigger: CAGGACATAAATTACGGCTTGCGTATTCTCCTTCCATGGGGCTCTACCTAGGAATATATATGCATGCTCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS CCA 72 bp | AGATCAAGAGGTCTCGGCAGATCAGGAATCGAGTGCTaGCAATTTTATACACACCTCGACACACAATATATC | + |
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Preference number: 6 (lower is better) Translates to: RSRGLGRSGIEC*QFYTHLDTQYI Trigger: GATATATTGTGTGTCGAGGTGTGTATAAAATTGCCAGCACTCGATTCCTGATCTGCCGAGACCTCTTGATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS GCA 72 bp | TTGATATATTTCACAATTGTTTGGTTCTCAGCATCATaGCACAGGGCCCAGATATCCGTTGAGGTTAAGGCA | + |
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Preference number: 6 (lower is better) Translates to: LIYFTIVWFSAS*HRAQISVEVKA Trigger: TGCCTTAACCTCAACGGATATCTGGGCCCTGTGGCATGATGCTGAGAACCAAACAATTGTGAAATATATCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS GCA 72 bp | AGATTGCAAGTTGTAACAACTGGTTTCCATCAAAACTaGCATGTCCATGGTAACAGACTCTCCAATCATCCG | + |
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Preference number: 6 (lower is better) Translates to: RLQVVTTGFHQN*HVHGNRLSNHP Trigger: CGGATGATTGGAGAGTCTGTTACCATGGACATGGCAGTTTTGATGGAAACCAGTTGTTACAACTTGCAATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS TCA 72 bp | GTAAAAAGGCTCCGCAAATACATTTCTCTGGGGTCTTaGTCGTCTCTGATGACAATTTCTTCTTCTGGTAGA | + |
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Preference number: 6 (lower is better) Translates to: VKRLRKYISLGS*SSLMTISSSGR Trigger: TCTACCAGAAGAAGAAATTGTCATCAGAGACGATCAAGACCCCAGAGAAATGTATTTGCGGAGCCTTTTTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS GCA 72 bp | AGAAGTCCAATGGCATGGACGGGGTTTCTGATCTCTTaGAGTTTACTACAAATGTCTTCCATCACATTTTCT | + |
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Preference number: 6 (lower is better) Translates to: RSPMAWTGFLIS*SLLQMSSITFS Trigger: AGAAAATGTGATGGAAGACATTTGTAGTAAACTGCAAGAGATCAGAAACCCCGTCCATGCCATTGGACTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS GCA 72 bp | GGCAATTTTATACACACCTCGACACACAATATATCCTaGTGTGCTACTACCATAGAGCTGGGAAAGATTCAT | + |
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Preference number: 6 (lower is better) Translates to: GNFIHTSTHNIS*CATTIELGKIH Trigger: ATGAATCTTTCCCAGCTCTATGGTAGTAGCACAGCAGGATATATTGTGTGTCGAGGTGTGTATAAAATTGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS CAA 72 bp | AAGAAGTCCAATGGCATGGACGGGGTTTCTGATCTCTaGCAGTTTACTACAAATGTCTTCCATCACATTTTC | + |
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Preference number: 6 (lower is better) Translates to: KKSNGMDGVSDL*QFTTNVFHHIF Trigger: GAAAATGTGATGGAAGACATTTGTAGTAAACTGCAAGAGATCAGAAACCCCGTCCATGCCATTGGACTTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS TCA 72 bp | TCAACTTTTCCAATGTCAGTAAATATGGACTGCATCTaGCTTTCAGTTACCAGCTCACTTCTGTACATACGG | + |
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Preference number: 6 (lower is better) Translates to: STFPMSVNMDCI*LSVTSSLLYIR Trigger: CCGTATGTACAGAAGTGAGCTGGTAACTGAAAGTCAGATGCAGTCCATATTTACTGACATTGGAAAAGTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS TCA 72 bp | TCTTCTGGTAGAGGCTGCATAAACACTGGATTCCACTaGCCTGCAACATTATGTTCGAAGTTGATATATTTC | + |
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Preference number: 6 (lower is better) Translates to: SSGRGCINTGFH*PATLCSKLIYF Trigger: GAAATATATCAACTTCGAACATAATGTTGCAGGTCAGTGGAATCCAGTGTTTATGCAGCCTCTACCAGAAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS GCA 72 bp | TTTTATACACACCTCGACACACAATATATCCTGCTGTaGTACTACCATAGAGCTGGGAAAGATTCATTCGAA | + |
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Preference number: 6 (lower is better) Translates to: FYTHLDTQYILL*YYHRAGKDSFE Trigger: TTCGAATGAATCTTTCCCAGCTCTATGGTAGTAGCACAGCAGGATATATTGTGTGTCGAGGTGTGTATAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS TCA 72 bp | CTTGCAACTTCTTGGAAGAATAACTCCATAATTGTCTaGGGGCTAGATACCAGTTTATTTGCCATTAAGGCA | + |
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Preference number: 6 (lower is better) Translates to: LATSWKNNSIIV*GLDTSLFAIKA Trigger: TGCCTTAATGGCAAATAAACTGGTATCTAGCCCTCAGACAATTATGGAGTTATTCTTCCAAGAAGTTGCAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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| CDS TCA 72 bp | GCTGTTGCTGACAGTGGAAACTCAATTCCAAAGTACTaGTGTCCTTTTCCTAATACAGCATCTACATATTCA | + |
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Preference number: 6 (lower is better) Translates to: AVADSGNSIPKY*CPFPNTASTYS Trigger: TGAATATGTAGATGCTGTATTAGGAAAAGGACATCAGTACTTTGGAATTGAGTTTCCACTGTCAGCAACAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057481.7 |
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