Pregenerated sensors for NUP133 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039509Ensembl transcript IDs: ENSMUST00000044795.8
Found 196 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TATGCCATTCTGAGGACAGACTGGCAGTGGTGGGGGAGGCCACACTaGGAACACTCAGAATGTGGGACCAACCATGACAGCCCGAAACAC | + |
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Preference number: 1 (lower is better) Translates to: YAILRTDWQWWGRPH*EHSECGTNHDSPKH Trigger: GTGTTTCGGGCTGTCATGGTTGGTCCCACATTCTGAGTGTTCCCAGTGTGGCCTCCCCCACCACTGCCAGTCTGTCCTCAGAATGGCATA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| 3UTR TCA 90 bp | CCCCTGTGCTCTGTACAGGTTGCCAGGGCCCTTTCAGGTCCTGACTaGCTCACACATCCTCAGAATACAGCACACTCACCTCAGGGACAA | + |
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Preference number: 1 (lower is better) Translates to: PLCSVQVARALSGPD*LTHPQNTAHSPQGQ Trigger: TTGTCCCTGAGGTGAGTGTGCTGTATTCTGAGGATGTGTGAGTCAGTCAGGACCTGAAAGGGCCCTGGCAACCTGTACAGAGCACAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| 3UTR TCA 90 bp | TTTCCCCCTGTGCTCTGTACAGGTTGCCAGGGCCCTTTCAGGTCCTaGCTGACTCACACATCCTCAGAATACAGCACACTCACCTCAGGG | + |
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Preference number: 1 (lower is better) Translates to: FPPVLCTGCQGPFRS*LTHTSSEYSTLTSG Trigger: CCCTGAGGTGAGTGTGCTGTATTCTGAGGATGTGTGAGTCAGTCAGGACCTGAAAGGGCCCTGGCAACCTGTACAGAGCACAGGGGGAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| 3UTR CCA 90 bp | GAGGCTGGAGAAGGGCAGCTACACAGAAGCAAGGGTGACTTCAGGTaGAAGAGGAGGAGGAAATACCTTACAGCTGAAAAAGAGCATCAG | + |
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Preference number: 1 (lower is better) Translates to: EAGEGQLHRSKGDFR*KRRRKYLTAEKEHQ Trigger: CTGATGCTCTTTTTCAGCTGTAAGGTATTTCCTCCTCCTCTTCCACCTGAAGTCACCCTTGCTTCTGTGTAGCTGCCCTTCTCCAGCCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| 3UTR CCA 90 bp | CAAAGGTGTGCTAAGTACTCACCATTGCCCACACAATACAAAAGGTaGTCGACTGAAGCTCATTTCAAAACAGAAGCCCAGCTTCCAGGT | + |
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Preference number: 1 (lower is better) Translates to: QRCAKYSPLPTQYKR*STEAHFKTEAQLPG Trigger: ACCTGGAAGCTGGGCTTCTGTTTTGAAATGAGCTTCAGTCGACCACCTTTTGTATTGTGTGGGCAATGGTGAGTACTTAGCACACCTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| 3UTR CAA 90 bp | CAGGGCTGGTATTGGACAACCAGTTGGGGAGCGAGGCAACCTGTTTaGTTTTGCTGCCTCTTTGGACCGAGGGAGGCTGGAGAAGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: QGWYWTTSWGARQPV*FCCLFGPREAGEGQ Trigger: CTGCCCTTCTCCAGCCTCCCTCGGTCCAAAGAGGCAGCAAAACAAAACAGGTTGCCTCGCTCCCCAACTGGTTGTCCAATACCAGCCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| 3UTR-3UTR CCA 90 bp | CTGTCACTGTCTTCAGACACACCAGAAGAGGGCCCTGGGACCTATTACAGATGGTGGACCGAGGGAGGCTaGAGAAGGGCAGCTACACAG | + |
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Preference number: 2 (lower is better) Translates to: LSLSSDTPEEGPGTYYRWWTEGG*RRAATQ Trigger: CTGTGTAGCTGCCCTTCTCCAGCCTCCCTCGGTCCA...CCATCTGTAATAGGTCCCAGGGCCCTCTTCTGGTGTGTCTGAAGACAGTGACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| 3UTR CAA 90 bp | CTGGTATTGGACAACCAGTTGGGGAGCGAGGCAACCTGTTTTGTTTaGCTGCCTCTTTGGACCGAGGGAGGCTGGAGAAGGGCAGCTACA | + |
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Preference number: 2 (lower is better) Translates to: LVLDNQLGSEATCFV*LPLWTEGGWRRAAT Trigger: TGTAGCTGCCCTTCTCCAGCCTCCCTCGGTCCAAAGAGGCAGCAAAACAAAACAGGTTGCCTCGCTCCCCAACTGGTTGTCCAATACCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| 3UTR-3UTR GCA 90 bp | CTGTCACTGTCTTCAGACACACCAGAAGAGGGCCCTGGGACCTATTACAGATGGGCAGGCACTTCCCTTTaGCTCCGACCAAGAGATCAG | + |
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Preference number: 2 (lower is better) Translates to: LSLSSDTPEEGPGTYYRWAGTSL*LRPRDQ Trigger: CTGATCTCTTGGTCGGAGGCAAAGGGAAGTGCCTGC...CCATCTGTAATAGGTCCCAGGGCCCTCTTCTGGTGTGTCTGAAGACAGTGACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| 3UTR-3UTR CCA 90 bp | TTCAGACACACCAGAAGAGGGCCCTGGGACCTATTACAGATGGTAGTGAGCCACGTTTTGCTGCCTCTTTaGACCGAGGGAGGCTGGAGA | + |
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Preference number: 2 (lower is better) Translates to: FRHTRRGPWDLLQMVVSHVLLPL*TEGGWR Trigger: TCTCCAGCCTCCCTCGGTCCAAAGAGGCAGCAAAAC...GTGGCTCACTACCATCTGTAATAGGTCCCAGGGCCCTCTTCTGGTGTGTCTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| 3UTR-3UTR TCA 90 bp | GGACCAACCATGACAGCCCGAAACACCATGAATTTGTCTTGCAGACCTCTGGCTACACAGAAGCAAGGGTaGCTTCAGGTGGAAGAGGAG | + |
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Preference number: 2 (lower is better) Translates to: GPTMTARNTMNLSCRPLATQKQG*LQVEEE Trigger: CTCCTCTTCCACCTGAAGTCACCCTTGCTTCTGTGT...AGCCAGAGGTCTGCAAGACAAATTCATGGTGTTTCGGGCTGTCATGGTTGGTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| 3UTR-3UTR TCA 90 bp | AGCAGGAGAAGGAAAACTGGAGCTCCTCTGAGAACAGAAGTCCAAAGGTGTGCTGGCCCTTTCAGGTCCTaGCTGACTCACACATCCTCA | + |
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Preference number: 2 (lower is better) Translates to: SRRRKTGAPLRTEVQRCAGPFRS*LTHTSS Trigger: TGAGGATGTGTGAGTCAGTCAGGACCTGAAAGGGCC...AGCACACCTTTGGACTTCTGTTCTCAGAGGAGCTCCAGTTTTCCTTCTCCTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| 3UTR-3UTR TCA 90 bp | CCATCCCAGCAGGAGAAGGAAAACTGGAGCTCCTCTGAGAACAGAAGTCCAAAGCAGCCCGAAACACCATaGATTTGTCTTGCAGACCTC | + |
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Preference number: 2 (lower is better) Translates to: PSQQEKENWSSSENRSPKQPETP*ICLADL Trigger: GAGGTCTGCAAGACAAATTCATGGTGTTTCGGGCTG...CTTTGGACTTCTGTTCTCAGAGGAGCTCCAGTTTTCCTTCTCCTGCTGGGATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| 3UTR-3UTR GCA 90 bp | ATCAGCTTCTCAGAGACTCCCAGAGTGCCACATGCAGAGGGCAATCTGTTTTCCCAACCTGTTTTGTTTTaGTGCCTCTTTGGACCGAGG | + |
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Preference number: 2 (lower is better) Translates to: ISFSETPRVPHAEGNLFSQPVLF*CLFGPR Trigger: CCTCGGTCCAAAGAGGCAGCAAAACAAAACAGGTTG...GGAAAACAGATTGCCCTCTGCATGTGGCACTCTGGGAGTCTCTGAGAAGCTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| 3UTR-3UTR CCA 90 bp | GCTAAGTACTCACCATTGCCCACACAATACAAAAGGTGGTCGACTGAAGCTCATCAGACAGGTAGGCCATaGCCAGAGCTCTCAGAGCAA | + |
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Preference number: 2 (lower is better) Translates to: AKYSPLPTQYKRWSTEAHQTGRP*PELSEQ Trigger: TTGCTCTGAGAGCTCTGGCCATGGCCTACCTGTCTG...ATGAGCTTCAGTCGACCACCTTTTGTATTGTGTGGGCAATGGTGAGTACTTAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| 3UTR-3UTR GCA 90 bp | GCTAAGTACTCACCATTGCCCACACAATACAAAAGGTGGTCGACTGAAGCTCATAAACCTTTCCCCCTGTaGTCTGTACAGGTTGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: AKYSPLPTQYKRWSTEAHKPFPL*SVQVAR Trigger: CCTGGCAACCTGTACAGAGCACAGGGGGAAAGGTTT...ATGAGCTTCAGTCGACCACCTTTTGTATTGTGTGGGCAATGGTGAGTACTTAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| 3UTR-3UTR CCA 90 bp | AGCAGGAGAAGGAAAACTGGAGCTCCTCTGAGAACAGAAGTCCAAAGGTGTGCTTGTTCTAGCCAGGGCTaGTGTGTACACTTGCAGTTT | + |
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Preference number: 2 (lower is better) Translates to: SRRRKTGAPLRTEVQRCACSSQG*CVHLQF Trigger: AAACTGCAAGTGTACACACCAGCCCTGGCTAGAACA...AGCACACCTTTGGACTTCTGTTCTCAGAGGAGCTCCAGTTTTCCTTCTCCTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| 3UTR-3UTR GCA 90 bp | CTGTCACTGTCTTCAGACACACCAGAAGAGGGCCCTGGGACCTATTACAGATGGCATAGAAAACCTGGTTaGTGCAGACAAAACAGACTT | + |
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Preference number: 2 (lower is better) Translates to: LSLSSDTPEEGPGTYYRWHRKPG*CRQNRL Trigger: AAGTCTGTTTTGTCTGCAGCAACCAGGTTTTCTATG...CCATCTGTAATAGGTCCCAGGGCCCTCTTCTGGTGTGTCTGAAGACAGTGACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| 3UTR-3UTR CCA 90 bp | GGACCAACCATGACAGCCCGAAACACCATGAATTTGTCTTGCAGACCTCTGGCTTTAGACCCAGGGTTTTaGTTTCTAGGCCACAGTATA | + |
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Preference number: 2 (lower is better) Translates to: GPTMTARNTMNLSCRPLALDPGF*FLGHSI Trigger: TATACTGTGGCCTAGAAACCAAAACCCTGGGTCTAA...AGCCAGAGGTCTGCAAGACAAATTCATGGTGTTTCGGGCTGTCATGGTTGGTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| 3UTR-3UTR GCA 90 bp | GCTAAGTACTCACCATTGCCCACACAATACAAAAGGTGGTCGACTGAAGCTCATGAGCCACCATGTGGTTaGTGGGAATTGAATTCAAGT | + |
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Preference number: 2 (lower is better) Translates to: AKYSPLPTQYKRWSTEAHEPPCG*WELNSS Trigger: ACTTGAATTCAATTCCCAGCAACCACATGGTGGCTC...ATGAGCTTCAGTCGACCACCTTTTGTATTGTGTGGGCAATGGTGAGTACTTAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| 3UTR-3UTR GCA 90 bp | CAGAAGCCCAGCTTCCAGGTCCACCAGTTACTTGTGTTTATTTTGGATATGAGCGCTGGTGTGTACACTTaGAGTTTTAGGACTTGGGAA | + |
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Preference number: 2 (lower is better) Translates to: QKPSFQVHQLLVFILDMSAGVYT*SFRTWE Trigger: TTCCCAAGTCCTAAAACTGCAAGTGTACACACCAGC...GCTCATATCCAAAATAAACACAAGTAACTGGTGGACCTGGAAGCTGGGCTTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| 3UTR-3UTR GCA 90 bp | GCTAAGTACTCACCATTGCCCACACAATACAAAAGGTGGTCGACTGAAGCTCATATAAACAGACACACTTaGTCAGCCCATAGAACGTTA | + |
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Preference number: 2 (lower is better) Translates to: AKYSPLPTQYKRWSTEAHINRHT*SAHRTL Trigger: TAACGTTCTATGGGCTGAGCAAGTGTGTCTGTTTAT...ATGAGCTTCAGTCGACCACCTTTTGTATTGTGTGGGCAATGGTGAGTACTTAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| 3UTR-3UTR TCA 90 bp | GCTAAGTACTCACCATTGCCCACACAATACAAAAGGTGGTCGACTGAAGCTCATACAGTCTTAGCTACCTaGCTTAGAAACAAATCATTC | + |
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Preference number: 2 (lower is better) Translates to: AKYSPLPTQYKRWSTEAHTVLAT*LRNKSF Trigger: GAATGATTTGTTTCTAAGTCAGGTAGCTAAGACTGT...ATGAGCTTCAGTCGACCACCTTTTGTATTGTGTGGGCAATGGTGAGTACTTAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| 3UTR-3UTR CCA 90 bp | AAGACTTATCCATTATTGATGGATGCAGTGGCCCACACTTTTAATCCTTTAATTACCAGAAGAGGGCCCTaGGACCTATTACAGATGGTA | + |
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Preference number: 2 (lower is better) Translates to: KTYPLLMDAVAHTFNPLITRRGP*DLLQMV Trigger: TACCATCTGTAATAGGTCCCAGGGCCCTCTTCTGGT...AATTAAAGGATTAAAAGTGTGGGCCACTGCATCCATCAATAATGGATAAGTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| 3UTR-3UTR CCA 90 bp | AACATCTTACTAAAACACTTTAAGACTTATCCATTATTGATGGATGCAGTGGCCCCACCATGTGGTTGCTaGGAATTGAATTCAAGTCCT | + |
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Preference number: 2 (lower is better) Translates to: NILLKHFKTYPLLMDAVAPPCGC*ELNSSP Trigger: AGGACTTGAATTCAATTCCCAGCAACCACATGGTGG...GGCCACTGCATCCATCAATAATGGATAAGTCTTAAAGTGTTTTAGTAAGATGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| 3UTR CCA 72 bp | GGGAGCGAGGCAACCTGTTTTGTTTTGCTGCCTCTTTaGACCGAGGGAGGCTGGAGAAGGGCAGCTACACAG | + |
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Preference number: 3 (lower is better) Translates to: GSEATCFVLLPL*TEGGWRRAATQ Trigger: CTGTGTAGCTGCCCTTCTCCAGCCTCCCTCGGTCCAAAGAGGCAGCAAAACAAAACAGGTTGCCTCGCTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| 3UTR GCA 72 bp | CCGACCAAGAGATCAGCTTCTCAGAGACTCCCAGAGTaGCACATGCAGAGGGCAATCTGTTTTCCCCGTCCC | + |
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Preference number: 3 (lower is better) Translates to: PTKRSASQRLPE*HMQRAICFPRP Trigger: GGGACGGGGAAAACAGATTGCCCTCTGCATGTGGCACTCTGGGAGTCTCTGAGAAGCTGATCTCTTGGTCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| 3UTR TCA 72 bp | GGAGGCTGGAGAAGGGCAGCTACACAGAAGCAAGGGTaGCTTCAGGTGGAAGAGGAGGAGGAAATACCTTAC | + |
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Preference number: 3 (lower is better) Translates to: GGWRRAATQKQG*LQVEEEEEIPY Trigger: GTAAGGTATTTCCTCCTCCTCTTCCACCTGAAGTCACCCTTGCTTCTGTGTAGCTGCCCTTCTCCAGCCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| 3UTR TCA 72 bp | GTGCTCTGTACAGGTTGCCAGGGCCCTTTCAGGTCCTaGCTGACTCACACATCCTCAGAATACAGCACACTC | + |
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Preference number: 3 (lower is better) Translates to: VLCTGCQGPFRS*LTHTSSEYSTL Trigger: GAGTGTGCTGTATTCTGAGGATGTGTGAGTCAGTCAGGACCTGAAAGGGCCCTGGCAACCTGTACAGAGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| 3UTR GCA 72 bp | CGTCCCCTGCCATCTCCAACACTTCCTCACTTCCGCTaGCCTGCTCTCCAACCTGTAGCATCTTTTAATTGC | + |
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Preference number: 3 (lower is better) Translates to: RPLPSPTLPHFR*PALQPVASFNC Trigger: GCAATTAAAAGATGCTACAGGTTGGAGAGCAGGGCAGCGGAAGTGAGGAAGTGTTGGAGATGGCAGGGGACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| 3UTR TCA 72 bp | AAGTCCTCTGGAAGAGTAGACAGCGCTCTTAACCACTaGGCCATCTCTCCAGCCCTGCCCCTTGCTTGTAAT | + |
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Preference number: 3 (lower is better) Translates to: KSSGRVDSALNH*AISPALPLACN Trigger: ATTACAAGCAAGGGGCAGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCGCTGTCTACTCTTCCAGAGGACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| 3UTR CCA 72 bp | ACTGTCACTGTCTTCAGACACACCAGAAGAGGGCCCTaGGACCTATTACAGATGGTAGTGAGCCACCATGTG | + |
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Preference number: 3 (lower is better) Translates to: TVTVFRHTRRGP*DLLQMVVSHHV Trigger: CACATGGTGGCTCACTACCATCTGTAATAGGTCCCAGGGCCCTCTTCTGGTGTGTCTGAAGACAGTGACAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| 3UTR CCA 72 bp | CCTCAGAATACAGCACACTCACCTCAGGGACAAGGGTaGCTGCTGCCATTCACAGTCCTAACTAGTTCATGC | + |
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Preference number: 3 (lower is better) Translates to: PQNTAHSPQGQG*LLPFTVLTSSC Trigger: GCATGAACTAGTTAGGACTGTGAATGGCAGCAGCCACCCTTGTCCCTGAGGTGAGTGTGCTGTATTCTGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| 3UTR-3UTR CAA 90 bp | AGCAGGAGAAGGAAAACTGGAGCTCCTCTGAGAACAGAAGTCCAAAGGTGTGCTGTATTGGACAACCAGTaGGGGAGCGAGGCAACCTGT | + |
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Preference number: 3 (lower is better) Translates to: SRRRKTGAPLRTEVQRCAVLDNQ*GSEATC Trigger: ACAGGTTGCCTCGCTCCCCAACTGGTTGTCCAATAC...AGCACACCTTTGGACTTCTGTTCTCAGAGGAGCTCCAGTTTTCCTTCTCCTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| 3UTR-3UTR CAA 90 bp | AGCAGGAGAAGGAAAACTGGAGCTCCTCTGAGAACAGAAGTCCAAAGGTGTGCTAGCAGGCACTTCCCTTaGCCTCCGACCAAGAGATCA | + |
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Preference number: 3 (lower is better) Translates to: SRRRKTGAPLRTEVQRCASRHFP*PPTKRS Trigger: TGATCTCTTGGTCGGAGGCAAAGGGAAGTGCCTGCT...AGCACACCTTTGGACTTCTGTTCTCAGAGGAGCTCCAGTTTTCCTTCTCCTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| 3UTR-3UTR CAA 90 bp | AGCAGGAGAAGGAAAACTGGAGCTCCTCTGAGAACAGAAGTCCAAAGGTGTGCTTTTTCAGGGCTGGTATaGGACAACCAGTTGGGGAGC | + |
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Preference number: 3 (lower is better) Translates to: SRRRKTGAPLRTEVQRCAFSGLV*DNQLGS Trigger: GCTCCCCAACTGGTTGTCCAATACCAGCCCTGAAAA...AGCACACCTTTGGACTTCTGTTCTCAGAGGAGCTCCAGTTTTCCTTCTCCTGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| 3UTR GCA 72 bp | CCAACCATGACAGCCCGAAACACCATGAATTTGTCTTaGAGACCTCTGGCTCTCCCCATAGCATCCAGTCAA | + |
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Preference number: 3 (lower is better) Translates to: PTMTARNTMNLS*RPLALPIASSQ Trigger: TTGACTGGATGCTATGGGGAGAGCCAGAGGTCTGCAAGACAAATTCATGGTGTTTCGGGCTGTCATGGTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| 3UTR-3UTR CAA 90 bp | GGACCAACCATGACAGCCCGAAACACCATGAATTTGTCTTGCAGACCTCTGGCTGTTAGACCCAGGGTTTaGGTTTCTAGGCCACAGTAT | + |
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Preference number: 3 (lower is better) Translates to: GPTMTARNTMNLSCRPLAVRPRV*VSRPQY Trigger: ATACTGTGGCCTAGAAACCAAAACCCTGGGTCTAAC...AGCCAGAGGTCTGCAAGACAAATTCATGGTGTTTCGGGCTGTCATGGTTGGTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| 3UTR-3UTR CAA 90 bp | CCATCCCAGCAGGAGAAGGAAAACTGGAGCTCCTCTGAGAACAGAAGTCCAAAGGCTAAGTACTCACCATaGCCCACACAATACAAAAGG | + |
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Preference number: 3 (lower is better) Translates to: PSQQEKENWSSSENRSPKAKYSP*PTQYKR Trigger: CCTTTTGTATTGTGTGGGCAATGGTGAGTACTTAGC...CTTTGGACTTCTGTTCTCAGAGGAGCTCCAGTTTTCCTTCTCCTGCTGGGATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| 3UTR GCA 72 bp | GTTTTTATTAAGGCAATGCAGATGCATGCAAGGACCTaGCATCCCAGCAGGAGAAGGAAAACTGGAGCTCCT | + |
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Preference number: 3 (lower is better) Translates to: VFIKAMQMHART*HPSRRRKTGAP Trigger: AGGAGCTCCAGTTTTCCTTCTCCTGCTGGGATGGCAGGTCCTTGCATGCATCTGCATTGCCTTAATAAAAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| 3UTR-3UTR CAA 90 bp | AGCAGGAGAAGGAAAACTGGAGCTCCTCTGAGAACAGAAGTCCAAAGGTGTGCTTGTGGTTGCTGGGAATaGAATTCAAGTCCTCTGGAA | + |
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Preference number: 3 (lower is better) Translates to: SRRRKTGAPLRTEVQRCACGCWE*NSSPLE Trigger: TTCCAGAGGACTTGAATTCAATTCCCAGCAACCACA...AGCACACCTTTGGACTTCTGTTCTCAGAGGAGCTCCAGTTTTCCTTCTCCTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| 3UTR GCA 72 bp | CGCGGCTCCCATATAAAGCATAGAAAACCTGGTTGCTaGAGACAAAACAGACTTCAGGTTGATCCAGACCTA | + |
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Preference number: 3 (lower is better) Translates to: RGSHIKHRKPGC*RQNRLQVDPDL Trigger: TAGGTCTGGATCAACCTGAAGTCTGTTTTGTCTGCAGCAACCAGGTTTTCTATGCTTTATATGGGAGCCGCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| 3UTR-3UTR CAA 90 bp | CAGAAGCCCAGCTTCCAGGTCCACCAGTTACTTGTGTTTATTTTGGATATGAGCAAGACTTATCCATTATaGATGGATGCAGTGGCCCAC | + |
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Preference number: 3 (lower is better) Translates to: QKPSFQVHQLLVFILDMSKTYPL*MDAVAH Trigger: GTGGGCCACTGCATCCATCAATAATGGATAAGTCTT...GCTCATATCCAAAATAAACACAAGTAACTGGTGGACCTGGAAGCTGGGCTTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| 3UTR GCA 72 bp | TATCGCGGCTCCCATATAAAGCATAGAAAACCTGGTTaGTGCAGACAAAACAGACTTCAGGTTGATCCAGAC | + |
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Preference number: 3 (lower is better) Translates to: YRGSHIKHRKPG*CRQNRLQVDPD Trigger: GTCTGGATCAACCTGAAGTCTGTTTTGTCTGCAGCAACCAGGTTTTCTATGCTTTATATGGGAGCCGCGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| 3UTR CCA 72 bp | GCTAAGTACTCACCATTGCCCACACAATACAAAAGGTaGTCGACTGAAGCTCATTTCAAAACAGAAGCCCAG | + |
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Preference number: 3 (lower is better) Translates to: AKYSPLPTQYKR*STEAHFKTEAQ Trigger: CTGGGCTTCTGTTTTGAAATGAGCTTCAGTCGACCACCTTTTGTATTGTGTGGGCAATGGTGAGTACTTAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| 3UTR TCA 72 bp | CCAGGGTTTTGGTTTCTAGGCCACAGTATAAATCAGTaGCATCTCATCTTCACTTTGCTAAGCAGGCACTTC | + |
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Preference number: 3 (lower is better) Translates to: PGFWFLGHSINQ*HLIFTLLSRHF Trigger: GAAGTGCCTGCTTAGCAAAGTGAAGATGAGATGTCACTGATTTATACTGTGGCCTAGAAACCAAAACCCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| 3UTR TCA 72 bp | ATGTACACCGGGTACCAGGAGACAGTCTTAGCTACCTaGCTTAGAAACAAATCATTCATTCTTCAGAGATGG | + |
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Preference number: 3 (lower is better) Translates to: MYTGYQETVLAT*LRNKSFILQRW Trigger: CCATCTCTGAAGAATGAATGATTTGTTTCTAAGTCAGGTAGCTAAGACTGTCTCCTGGTACCCGGTGTACAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| 3UTR TCA 72 bp | ATGCCAGTACCATATCTGGTAGCAATGACAACTTACTaGCAGCTCAGAAAGCCACACAAACATCTTACTAAA | + |
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Preference number: 3 (lower is better) Translates to: MPVPYLVAMTTY*QLRKPHKHLTK Trigger: TTTAGTAAGATGTTTGTGTGGCTTTCTGAGCTGTCAGTAAGTTGTCATTGCTACCAGATATGGTACTGGCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| 3UTR-3UTR CAA 90 bp | AAGACTTATCCATTATTGATGGATGCAGTGGCCCACACTTTTAATCCTTTAATTCTCCAGCCCTGCCCCTaGCTTGTAATTTTTAAATCA | + |
|
Preference number: 3 (lower is better) Translates to: KTYPLLMDAVAHTFNPLILQPCP*LVIFKS Trigger: TGATTTAAAAATTACAAGCAAGGGGCAGGGCTGGAG...AATTAAAGGATTAAAAGTGTGGGCCACTGCATCCATCAATAATGGATAAGTCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS-3UTR CCA 90 bp | GGTAGTGAGCCACCATGTGGTTGCTGGGAATTGAATTCAAGTCCTCTGGAAGAGTCGGGTCCCCGGCCCTaGGGTTCGCGGAGAGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: GSEPPCGCWELNSSPLEESGPRP*GSRRGD Trigger: GTCTCCTCTCCGCGAACCCCAGGGCCGGGGACCCGA...CTCTTCCAGAGGACTTGAATTCAATTCCCAGCAACCACATGGTGGCTCACTACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS-3UTR CCA 90 bp | TTCAGACACACCAGAAGAGGGCCCTGGGACCTATTACAGATGGTAGTGAGCCACCTTCCCTGGCGAGGCTaGGCCAATAGCGGATGGACC | + |
|
Preference number: 4 (lower is better) Translates to: FRHTRRGPWDLLQMVVSHLPWRG*ANSGWT Trigger: GGTCCATCCGCTATTGGCCCAGCCTCGCCAGGGAAG...GTGGCTCACTACCATCTGTAATAGGTCCCAGGGCCCTCTTCTGGTGTGTCTGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS-3UTR GCA 90 bp | TTCAGACACACCAGAAGAGGGCCCTGGGACCTATTACAGATGGTAGTGAGCCACCAATCCCTGAGAGCATaGCTTGGCCCTGGGGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: FRHTRRGPWDLLQMVVSHQSLRA*LGPGAG Trigger: TCCTGCCCCAGGGCCAAGGCATGCTCTCAGGGATTG...GTGGCTCACTACCATCTGTAATAGGTCCCAGGGCCCTCTTCTGGTGTGTCTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS-3UTR GCA 90 bp | CTGTCACTGTCTTCAGACACACCAGAAGAGGGCCCTGGGACCTATTACAGATGGTCCCAGGTGCCACGCTaGTGCCAAAATCAGGAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LSLSSDTPEEGPGTYYRWSQVPR*CQNQEP Trigger: GGGCTCCTGATTTTGGCAGCAGCGTGGCACCTGGGA...CCATCTGTAATAGGTCCCAGGGCCCTCTTCTGGTGTGTCTGAAGACAGTGACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS-3UTR CCA 90 bp | ATCAGCTTCTCAGAGACTCCCAGAGTGCCACATGCAGAGGGCAATCTGTTTTCCCCTGAGAGCATGCCTTaGCCCTGGGGCAGGACATGC | + |
|
Preference number: 4 (lower is better) Translates to: ISFSETPRVPHAEGNLFSPESMP*PWGRTC Trigger: GCATGTCCTGCCCCAGGGCCAAGGCATGCTCTCAGG...GGAAAACAGATTGCCCTCTGCATGTGGCACTCTGGGAGTCTCTGAGAAGCTGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| 3UTR CAA 72 bp | GACAACCAGTTGGGGAGCGAGGCAACCTGTTTTGTTTaGCTGCCTCTTTGGACCGAGGGAGGCTGGAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: DNQLGSEATCFV*LPLWTEGGWRR Trigger: CCTTCTCCAGCCTCCCTCGGTCCAAAGAGGCAGCAAAACAAAACAGGTTGCCTCGCTCCCCAACTGGTTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS-3UTR TCA 90 bp | TTCAGACACACCAGAAGAGGGCCCTGGGACCTATTACAGATGGTAGTGAGCCACCCACGGAGGACAGGATaGAACTTCCTCCCTGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: FRHTRRGPWDLLQMVVSHPRRTG*NFLPAL Trigger: CAGTGCAGGGAGGAAGTTTCATCCTGTCCTCCGTGG...GTGGCTCACTACCATCTGTAATAGGTCCCAGGGCCCTCTTCTGGTGTGTCTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS-3UTR TCA 90 bp | TTCAGACACACCAGAAGAGGGCCCTGGGACCTATTACAGATGGTAGTGAGCCACGCCCCGTCCACCAACTaGGGAGGTCAAAGACTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FRHTRRGPWDLLQMVVSHAPSTN*GGQRLF Trigger: GAAGAGTCTTTGACCTCCTCAGTTGGTGGACGGGGC...GTGGCTCACTACCATCTGTAATAGGTCCCAGGGCCCTCTTCTGGTGTGTCTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS-3UTR GCA 90 bp | CCATCCCAGCAGGAGAAGGAAAACTGGAGCTCCTCTGAGAACAGAAGTCCAAAGGGGCTGTCTCCCAGGTaGCACGCTGCTGCCAAAATC | + |
|
Preference number: 4 (lower is better) Translates to: PSQQEKENWSSSENRSPKGLSPR*HAAAKI Trigger: GATTTTGGCAGCAGCGTGGCACCTGGGAGACAGCCC...CTTTGGACTTCTGTTCTCAGAGGAGCTCCAGTTTTCCTTCTCCTGCTGGGATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS-3UTR TCA 90 bp | TTCAGACACACCAGAAGAGGGCCCTGGGACCTATTACAGATGGTAGTGAGCCACAGGTCCACACTGATCTaGGTCACGGCCTTGTCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: FRHTRRGPWDLLQMVVSHRSTLI*VTALSS Trigger: GCTAGACAAGGCCGTGACTCAGATCAGTGTGGACCT...GTGGCTCACTACCATCTGTAATAGGTCCCAGGGCCCTCTTCTGGTGTGTCTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS-3UTR CCA 90 bp | TTCAGACACACCAGAAGAGGGCCCTGGGACCTATTACAGATGGTAGTGAGCCACCGCTGGAGTCGGGCTTaGTTGTCTGTCTGTTCACAC | + |
|
Preference number: 4 (lower is better) Translates to: FRHTRRGPWDLLQMVVSHRWSRA*LSVCSH Trigger: GTGTGAACAGACAGACAACCAAGCCCGACTCCAGCG...GTGGCTCACTACCATCTGTAATAGGTCCCAGGGCCCTCTTCTGGTGTGTCTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| 3UTR CAA 72 bp | TATTGGACAACCAGTTGGGGAGCGAGGCAACCTGTTTaGTTTTGCTGCCTCTTTGGACCGAGGGAGGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: YWTTSWGARQPV*FCCLFGPREAG Trigger: TCCAGCCTCCCTCGGTCCAAAGAGGCAGCAAAACAAAACAGGTTGCCTCGCTCCCCAACTGGTTGTCCAATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS-3UTR CCA 90 bp | GGACCAACCATGACAGCCCGAAACACCATGAATTTGTCTTGCAGACCTCTGGCTTCGCTAGGGGGCAGCTaGAGTTCTTTGCAGACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: GPTMTARNTMNLSCRPLASLGGS*SSLQTD Trigger: GTCTGTCTGCAAAGAACTCCAGCTGCCCCCTAGCGA...AGCCAGAGGTCTGCAAGACAAATTCATGGTGTTTCGGGCTGTCATGGTTGGTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| 3UTR CAA 72 bp | AGAGCTCTCAGAGCAACATCTCTGGGTAGACCAGCCTaGGCATTACGATGTTTAGGAAGGGACCGTCTACGG | + |
|
Preference number: 4 (lower is better) Translates to: RALRATSLGRPA*ALRCLGRDRLR Trigger: CCGTAGACGGTCCCTTCCTAAACATCGTAATGCCAAGGCTGGTCTACCCAGAGATGTTGCTCTGAGAGCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| 3UTR CAA 72 bp | AAACAACAAAACCTTTCCCCCTGTGCTCTGTACAGGTaGCCAGGGCCCTTTCAGGTCCTGACTGACTCACAC | + |
|
Preference number: 4 (lower is better) Translates to: KQQNLSPCALYR*PGPFQVLTDSH Trigger: GTGTGAGTCAGTCAGGACCTGAAAGGGCCCTGGCAACCTGTACAGAGCACAGGGGGAAAGGTTTTGTTGTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS-3UTR TCA 90 bp | ATCAGCTTCTCAGAGACTCCCAGAGTGCCACATGCAGAGGGCAATCTGTTTTCCCAGGGTGTAGAAACTTaGTCCTCCTCTGTCCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: ISFSETPRVPHAEGNLFSQGVET*SSSVPQ Trigger: CTGTGGGACAGAGGAGGATCAAGTTTCTACACCCTG...GGAAAACAGATTGCCCTCTGCATGTGGCACTCTGGGAGTCTCTGAGAAGCTGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS-3UTR GCA 90 bp | TTCAGACACACCAGAAGAGGGCCCTGGGACCTATTACAGATGGTAGTGAGCCACATGAAACTTCCTCCCTaGACTGCTGTCAGGAACCTG | + |
|
Preference number: 4 (lower is better) Translates to: FRHTRRGPWDLLQMVVSHMKLPP*TAVRNL Trigger: CAGGTTCCTGACAGCAGTGCAGGGAGGAAGTTTCAT...GTGGCTCACTACCATCTGTAATAGGTCCCAGGGCCCTCTTCTGGTGTGTCTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS-3UTR CCA 90 bp | TTCAGACACACCAGAAGAGGGCCCTGGGACCTATTACAGATGGTAGTGAGCCACACTTCCCAGTGCCTGTaGAGCACACAAAGACAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: FRHTRRGPWDLLQMVVSHTSQCL*STQRQH Trigger: ATGCTGTCTTTGTGTGCTCCACAGGCACTGGGAAGT...GTGGCTCACTACCATCTGTAATAGGTCCCAGGGCCCTCTTCTGGTGTGTCTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS-3UTR CCA 90 bp | GGTAGTGAGCCACCATGTGGTTGCTGGGAATTGAATTCAAGTCCTCTGGAAGAGCAGGAGTCAGGCTGTTaGGAACCTCACACTCCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GSEPPCGCWELNSSPLEEQESGC*EPHTPS Trigger: AGAGGGAGTGTGAGGTTCCCAACAGCCTGACTCCTG...CTCTTCCAGAGGACTTGAATTCAATTCCCAGCAACCACATGGTGGCTCACTACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS-3UTR TCA 90 bp | CCATCCCAGCAGGAGAAGGAAAACTGGAGCTCCTCTGAGAACAGAAGTCCAAAGGGCAGGACATGCTGGTaGATCTTTCCTGAGCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PSQQEKENWSSSENRSPKGRTCW*IFPELS Trigger: TGAAAGCTCAGGAAAGATTCACCAGCATGTCCTGCC...CTTTGGACTTCTGTTCTCAGAGGAGCTCCAGTTTTCCTTCTCCTGCTGGGATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS-3UTR TCA 90 bp | ATCAGCTTCTCAGAGACTCCCAGAGTGCCACATGCAGAGGGCAATCTGTTTTCCTGCACATCCCAGCTGTaGACCTGCTTCTCTGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: ISFSETPRVPHAEGNLFSCTSQL*TCFSEE Trigger: TTCTTCAGAGAAGCAGGTTCACAGCTGGGATGTGCA...GGAAAACAGATTGCCCTCTGCATGTGGCACTCTGGGAGTCTCTGAGAAGCTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS-3UTR TCA 90 bp | CTGTCACTGTCTTCAGACACACCAGAAGAGGGCCCTGGGACCTATTACAGATGGTACGGTGACTGCATCTaGCATCTGGTTACCATTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LSLSSDTPEEGPGTYYRWYGDCI*HLVTIV Trigger: GACAATGGTAACCAGATGTCAGATGCAGTCACCGTA...CCATCTGTAATAGGTCCCAGGGCCCTCTTCTGGTGTGTCTGAAGACAGTGACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS-3UTR TCA 90 bp | CTGTCACTGTCTTCAGACACACCAGAAGAGGGCCCTGGGACCTATTACAGATGGTTTCATGTAACCAGCTaGGATGCTCATGGGCTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LSLSSDTPEEGPGTYYRWFHVTS*DAHGLA Trigger: TGCAAGCCCATGAGCATCTCAGCTGGTTACATGAAA...CCATCTGTAATAGGTCCCAGGGCCCTCTTCTGGTGTGTCTGAAGACAGTGACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS-3UTR TCA 90 bp | AGCAGGAGAAGGAAAACTGGAGCTCCTCTGAGAACAGAAGTCCAAAGGTGTGCTAGTAAGAGTTGGACTTaGGGCTTCCCAGCTGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SRRRKTGAPLRTEVQRCASKSWT*GFPAAL Trigger: CAGAGCAGCTGGGAAGCCTCAAGTCCAACTCTTACT...AGCACACCTTTGGACTTCTGTTCTCAGAGGAGCTCCAGTTTTCCTTCTCCTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS-3UTR GCA 90 bp | TTCAGACACACCAGAAGAGGGCCCTGGGACCTATTACAGATGGTAGTGAGCCACCACCATCAATCGACATaGGATCAGGTCTTCAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: FRHTRRGPWDLLQMVVSHHHQST*DQVFRL Trigger: CAGTCTGAAGACCTGATCGCATGTCGATTGATGGTG...GTGGCTCACTACCATCTGTAATAGGTCCCAGGGCCCTCTTCTGGTGTGTCTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS-3UTR GCA 90 bp | TCAGGTGGAAGAGGAGGAGGAAATACCTTACAGCTGAAAAAGAGCATCAGGGCCAGGACTTGTTCCTCATaGTCCAGGAGGCACTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: SGGRGGGNTLQLKKSIRARTCSS*SRRHSQ Trigger: CTGTGAGTGCCTCCTGGAGCATGAGGAACAAGTCCT...GGCCCTGATGCTCTTTTTCAGCTGTAAGGTATTTCCTCCTCCTCTTCCACCTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS-3UTR CCA 90 bp | CAGAAGCCCAGCTTCCAGGTCCACCAGTTACTTGTGTTTATTTTGGATATGAGCTCTGGCAGGGTCTCCTaGTGTAGCAGGAAGCGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QKPSFQVHQLLVFILDMSSGRVS*CSRKRS Trigger: AGAGCGCTTCCTGCTACACCAGGAGACCCTGCCAGA...GCTCATATCCAAAATAAACACAAGTAACTGGTGGACCTGGAAGCTGGGCTTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| 3UTR CAA 72 bp | ACCAACCATGACAGCCCGAAACACCATGAATTTGTCTaGCAGACCTCTGGCTCTCCCCATAGCATCCAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: TNHDSPKHHEFV*QTSGSPHSIQS Trigger: TGACTGGATGCTATGGGGAGAGCCAGAGGTCTGCAAGACAAATTCATGGTGTTTCGGGCTGTCATGGTTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS-3UTR TCA 90 bp | CTGTCACTGTCTTCAGACACACCAGAAGAGGGCCCTGGGACCTATTACAGATGGCTGGTGAATCTTTCCTaGGCTTTCAGGAATCAATCG | + |
|
Preference number: 4 (lower is better) Translates to: LSLSSDTPEEGPGTYYRWLVNLS*AFRNQS Trigger: CGATTGATTCCTGAAAGCTCAGGAAAGATTCACCAG...CCATCTGTAATAGGTCCCAGGGCCCTCTTCTGGTGTGTCTGAAGACAGTGACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS-3UTR TCA 90 bp | AGCAGGAGAAGGAAAACTGGAGCTCCTCTGAGAACAGAAGTCCAAAGGTGTGCTCCAGTTCCCATTTGCTaGTGTTTGAACTCGTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SRRRKTGAPLRTEVQRCAPVPIC*CLNSSG Trigger: CCCTGACGAGTTCAAACATCAGCAAATGGGAACTGG...AGCACACCTTTGGACTTCTGTTCTCAGAGGAGCTCCAGTTTTCCTTCTCCTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS-3UTR TCA 90 bp | CTGTCACTGTCTTCAGACACACCAGAAGAGGGCCCTGGGACCTATTACAGATGGGAATCCAAATCCGTGTaGGAGGAAAACAGCTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: LSLSSDTPEEGPGTYYRWESKSV*EENSSS Trigger: TGATGAGCTGTTTTCCTCTCACACGGATTTGGATTC...CCATCTGTAATAGGTCCCAGGGCCCTCTTCTGGTGTGTCTGAAGACAGTGACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS-3UTR TCA 90 bp | GCTAAGTACTCACCATTGCCCACACAATACAAAAGGTGGTCGACTGAAGCTCATACCTCTGCCCACTCCTaGGAGACCAACGCAACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: AKYSPLPTQYKRWSTEAHTSAHS*ETNATS Trigger: TGAAGTTGCGTTGGTCTCTCAGGAGTGGGCAGAGGT...ATGAGCTTCAGTCGACCACCTTTTGTATTGTGTGGGCAATGGTGAGTACTTAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS-3UTR GCA 90 bp | AGCAGGAGAAGGAAAACTGGAGCTCCTCTGAGAACAGAAGTCCAAAGGTGTGCTGTCACAATACTTCTCTaGCAGAGAAGCTGCCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: SRRRKTGAPLRTEVQRCAVTILL*QRSCPW Trigger: CCATGGGCAGCTTCTCTGGCAGAGAAGTATTGTGAC...AGCACACCTTTGGACTTCTGTTCTCAGAGGAGCTCCAGTTTTCCTTCTCCTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS-3UTR GCA 90 bp | TTCAGACACACCAGAAGAGGGCCCTGGGACCTATTACAGATGGTAGTGAGCCACGCTTCAATCTTCTCTTaGAGCCTGTCCTCTGAAATG | + |
|
Preference number: 4 (lower is better) Translates to: FRHTRRGPWDLLQMVVSHASIFS*SLSSEM Trigger: CATTTCAGAGGACAGGCTGCAAGAGAAGATTGAAGC...GTGGCTCACTACCATCTGTAATAGGTCCCAGGGCCCTCTTCTGGTGTGTCTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS-3UTR GCA 90 bp | GGTAGTGAGCCACCATGTGGTTGCTGGGAATTGAATTCAAGTCCTCTGGAAGAGGACCAGTCATCTCTCTaGAGTGCTCTGCACAGAATC | + |
|
Preference number: 4 (lower is better) Translates to: GSEPPCGCWELNSSPLEEDQSSL*SALHRI Trigger: GATTCTGTGCAGAGCACTGCAGAGAGATGACTGGTC...CTCTTCCAGAGGACTTGAATTCAATTCCCAGCAACCACATGGTGGCTCACTACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS-3UTR CCA 90 bp | GGTAGTGAGCCACCATGTGGTTGCTGGGAATTGAATTCAAGTCCTCTGGAAGAGCAGATAGTGTCCACCTaGGACACCTCTCGAAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GSEPPCGCWELNSSPLEEQIVST*DTSRKK Trigger: CTTCTTTCGAGAGGTGTCCCAGGTGGACACTATCTG...CTCTTCCAGAGGACTTGAATTCAATTCCCAGCAACCACATGGTGGCTCACTACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| 3UTR CAA 72 bp | CATCTCATCTTCACTTTGCTAAGCAGGCACTTCCCTTaGCCTCCGACCAAGAGATCAGCTTCTCAGAGACTC | + |
|
Preference number: 4 (lower is better) Translates to: HLIFTLLSRHFP*PPTKRSASQRL Trigger: GAGTCTCTGAGAAGCTGATCTCTTGGTCGGAGGCAAAGGGAAGTGCCTGCTTAGCAAAGTGAAGATGAGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS-3UTR TCA 90 bp | TCAGGTGGAAGAGGAGGAGGAAATACCTTACAGCTGAAAAAGAGCATCAGGGCCGTAGTTCACAGACTCTaGTATGGAATGGTGGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SGGRGGGNTLQLKKSIRAVVHRL*YGMVGE Trigger: TTCCCCCACCATTCCATATCAGAGTCTGTGAACTAC...GGCCCTGATGCTCTTTTTCAGCTGTAAGGTATTTCCTCCTCCTCTTCCACCTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS-3UTR TCA 90 bp | GGTAGTGAGCCACCATGTGGTTGCTGGGAATTGAATTCAAGTCCTCTGGAAGAGCAGCAATCTTCCAAATaGGGAGCTTCTCCGTGCATA | + |
|
Preference number: 4 (lower is better) Translates to: GSEPPCGCWELNSSPLEEQQSSK*GASPCI Trigger: TATGCACGGAGAAGCTCCTCATTTGGAAGATTGCTG...CTCTTCCAGAGGACTTGAATTCAATTCCCAGCAACCACATGGTGGCTCACTACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS-3UTR TCA 90 bp | GGTAGTGAGCCACCATGTGGTTGCTGGGAATTGAATTCAAGTCCTCTGGAAGAGCATTTTCCCTTGGAGTaGCAGACACCAGACCACTAT | + |
|
Preference number: 4 (lower is better) Translates to: GSEPPCGCWELNSSPLEEHFPLE*QTPDHY Trigger: ATAGTGGTCTGGTGTCTGTCACTCCAAGGGAAAATG...CTCTTCCAGAGGACTTGAATTCAATTCCCAGCAACCACATGGTGGCTCACTACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS-3UTR GCA 90 bp | GCTAAGTACTCACCATTGCCCACACAATACAAAAGGTGGTCGACTGAAGCTCATAAACCATACTCTCACTaGCCCGTCCACCAACTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: AKYSPLPTQYKRWSTEAHKPYSH*PVHQLR Trigger: CCTCAGTTGGTGGACGGGGCAGTGAGAGTATGGTTT...ATGAGCTTCAGTCGACCACCTTTTGTATTGTGTGGGCAATGGTGAGTACTTAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS-3UTR GCA 90 bp | AGCAGGAGAAGGAAAACTGGAGCTCCTCTGAGAACAGAAGTCCAAAGGTGTGCTTTGTCCTCCAGCTGGTaGAAAATGATCAGTGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SRRRKTGAPLRTEVQRCALSSSW*KMISEV Trigger: CACCTCACTGATCATTTTGCACCAGCTGGAGGACAA...AGCACACCTTTGGACTTCTGTTCTCAGAGGAGCTCCAGTTTTCCTTCTCCTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS-3UTR CCA 90 bp | CTGTCACTGTCTTCAGACACACCAGAAGAGGGCCCTGGGACCTATTACAGATGGAAGTACTCGCTGAGCTaGATGCCGTCTTTTATAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LSLSSDTPEEGPGTYYRWKYSLS*MPSFIS Trigger: ACTTATAAAAGACGGCATCCAGCTCAGCGAGTACTT...CCATCTGTAATAGGTCCCAGGGCCCTCTTCTGGTGTGTCTGAAGACAGTGACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS-3UTR TCA 90 bp | GCTAAGTACTCACCATTGCCCACACAATACAAAAGGTGGTCGACTGAAGCTCATGTGAACCTGCTTCTCTaGAGAATCGTCCAGTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: AKYSPLPTQYKRWSTEAHVNLLL*RIVQFP Trigger: TGGGAACTGGACGATTCTTCAGAGAAGCAGGTTCAC...ATGAGCTTCAGTCGACCACCTTTTGTATTGTGTGGGCAATGGTGAGTACTTAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS-3UTR TCA 90 bp | GCTAAGTACTCACCATTGCCCACACAATACAAAAGGTGGTCGACTGAAGCTCATGAGTCACTTCTACGGTaGCTGCATCTGACATCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: AKYSPLPTQYKRWSTEAHESLLR*LHLTSG Trigger: ACCAGATGTCAGATGCAGTCACCGTAGAAGTGACTC...ATGAGCTTCAGTCGACCACCTTTTGTATTGTGTGGGCAATGGTGAGTACTTAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS-3UTR TCA 90 bp | AGCAGGAGAAGGAAAACTGGAGCTCCTCTGAGAACAGAAGTCCAAAGGTGTGCTATCATCTTTGCCATCTaGACCAGACCAGTCATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SRRRKTGAPLRTEVQRCAIIFAI*TRPVIS Trigger: AGAGATGACTGGTCTGGTTCAGATGGCAAAGATGAT...AGCACACCTTTGGACTTCTGTTCTCAGAGGAGCTCCAGTTTTCCTTCTCCTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS-3UTR GCA 90 bp | CAGAAGCCCAGCTTCCAGGTCCACCAGTTACTTGTGTTTATTTTGGATATGAGCCTCTCTGCAGTGCTCTaGACAGAATCTCCAGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QKPSFQVHQLLVFILDMSLSAVL*TESPAS Trigger: TGAAGCTGGAGATTCTGTGCAGAGCACTGCAGAGAG...GCTCATATCCAAAATAAACACAAGTAACTGGTGGACCTGGAAGCTGGGCTTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS-3UTR CCA 90 bp | TCAGGTGGAAGAGGAGGAGGAAATACCTTACAGCTGAAAAAGAGCATCAGGGCCACTGCATCTGACATCTaGTTACCATTGTCTTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: SGGRGGGNTLQLKKSIRATASDI*LPLSST Trigger: GGTGGAAGACAATGGTAACCAGATGTCAGATGCAGT...GGCCCTGATGCTCTTTTTCAGCTGTAAGGTATTTCCTCCTCCTCTTCCACCTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS-3UTR CCA 90 bp | TCAGGTGGAAGAGGAGGAGGAAATACCTTACAGCTGAAAAAGAGCATCAGGGCCATCTTGTCCTCCAGCTaGTGCAAAATGATCAGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SGGRGGGNTLQLKKSIRAILSSS*CKMISE Trigger: CTCACTGATCATTTTGCACCAGCTGGAGGACAAGAT...GGCCCTGATGCTCTTTTTCAGCTGTAAGGTATTTCCTCCTCCTCTTCCACCTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS-3UTR CCA 90 bp | AGCAGGAGAAGGAAAACTGGAGCTCCTCTGAGAACAGAAGTCCAAAGGTGTGCTCTGCTGTATCGTTCTTaGTCACTGGATTTCTCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: SRRRKTGAPLRTEVQRCALLYRS*SLDFSS Trigger: GCTAGAGAAATCCAGTGACCAAGAACGATACAGCAG...AGCACACCTTTGGACTTCTGTTCTCAGAGGAGCTCCAGTTTTCCTTCTCCTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS-3UTR GCA 90 bp | AAGACTTATCCATTATTGATGGATGCAGTGGCCCACACTTTTAATCCTTTAATTCTCTCGGTCAGCAGCTaGTCTGGCAGGGTCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KTYPLLMDAVAHTFNPLILSVSS*SGRVSW Trigger: CCAGGAGACCCTGCCAGAGCAGCTGCTGACCGAGAG...AATTAAAGGATTAAAAGTGTGGGCCACTGCATCCATCAATAATGGATAAGTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS-3UTR GCA 90 bp | GCTAAGTACTCACCATTGCCCACACAATACAAAAGGTGGTCGACTGAAGCTCATGGTCAACACAGGCATTaGACTAAGACTCAGCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: AKYSPLPTQYKRWSTEAHGQHRH*TKTQLS Trigger: AGACAGCTGAGTCTTAGTGCAATGCCTGTGTTGACC...ATGAGCTTCAGTCGACCACCTTTTGTATTGTGTGGGCAATGGTGAGTACTTAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS-3UTR CCA 90 bp | TTCAGACACACCAGAAGAGGGCCCTGGGACCTATTACAGATGGTAGTGAGCCACAAATCTGAAAAATTCTaGTCAGCAAACTGGGTCATG | + |
|
Preference number: 4 (lower is better) Translates to: FRHTRRGPWDLLQMVVSHKSEKF*SANWVM Trigger: CATGACCCAGTTTGCTGACCAGAATTTTTCAGATTT...GTGGCTCACTACCATCTGTAATAGGTCCCAGGGCCCTCTTCTGGTGTGTCTGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| 3UTR CAA 72 bp | CCCAGCTTCCAGGTCCACCAGTTACTTGTGTTTATTTaGGATATGAGCTCAATGTCAGGCTTCACACGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: PSFQVHQLLVFI*DMSSMSGFTRL Trigger: AAGGCGTGTGAAGCCTGACATTGAGCTCATATCCAAAATAAACACAAGTAACTGGTGGACCTGGAAGCTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS-3UTR GCA 90 bp | CAGAAGCCCAGCTTCCAGGTCCACCAGTTACTTGTGTTTATTTTGGATATGAGCATGACAGAAACAGCCTaGACAGAATGGACTTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: QKPSFQVHQLLVFILDMSMTETA*TEWTSP Trigger: AGGTGAAGTCCATTCTGTGCAGGCTGTTTCTGTCAT...GCTCATATCCAAAATAAACACAAGTAACTGGTGGACCTGGAAGCTGGGCTTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS-3UTR GCA 90 bp | GCTAAGTACTCACCATTGCCCACACAATACAAAAGGTGGTCGACTGAAGCTCATCGATTGGATCATCTTTaGCATCTGAACCAGACCAGT | + |
|
Preference number: 4 (lower is better) Translates to: AKYSPLPTQYKRWSTEAHRLDHL*HLNQTS Trigger: ACTGGTCTGGTTCAGATGGCAAAGATGATCCAATCG...ATGAGCTTCAGTCGACCACCTTTTGTATTGTGTGGGCAATGGTGAGTACTTAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS-3UTR TCA 90 bp | CAGAAGCCCAGCTTCCAGGTCCACCAGTTACTTGTGTTTATTTTGGATATGAGCGTCTGTTCACACATCTaGACCAGGATATCAAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: QKPSFQVHQLLVFILDMSVCSHI*TRISKS Trigger: TGACTTTGATATCCTGGTTCAGATGTGTGAACAGAC...GCTCATATCCAAAATAAACACAAGTAACTGGTGGACCTGGAAGCTGGGCTTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS-3UTR GCA 90 bp | AAGACTTATCCATTATTGATGGATGCAGTGGCCCACACTTTTAATCCTTTAATTCTGCTGTCAGGAACCTaGACATCTTCTCGCCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: KTYPLLMDAVAHTFNPLILLSGT*TSSRLP Trigger: TGGGAGGCGAGAAGATGTGCAGGTTCCTGACAGCAG...AATTAAAGGATTAAAAGTGTGGGCCACTGCATCCATCAATAATGGATAAGTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS-3UTR TCA 90 bp | AACATCTTACTAAAACACTTTAAGACTTATCCATTATTGATGGATGCAGTGGCCTCCACCAAGAGGCAGTaGGCTTTCATCTTGTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: NILLKHFKTYPLLMDAVASTKRQ*AFILSS Trigger: GGAGGACAAGATGAAAGCTCACTGCCTCTTGGTGGA...GGCCACTGCATCCATCAATAATGGATAAGTCTTAAAGTGTTTTAGTAAGATGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS-3UTR CCA 90 bp | AAGACTTATCCATTATTGATGGATGCAGTGGCCCACACTTTTAATCCTTTAATTCAGACTGATGAGTTGTaGTGCGGTCAACACAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: KTYPLLMDAVAHTFNPLIQTDEL*CGQHRH Trigger: ATGCCTGTGTTGACCGCACCACAACTCATCAGTCTG...AATTAAAGGATTAAAAGTGTGGGCCACTGCATCCATCAATAATGGATAAGTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS-3UTR CCA 90 bp | AACATCTTACTAAAACACTTTAAGACTTATCCATTATTGATGGATGCAGTGGCCGGATACATTTTCCCTTaGAGTGACAGACACCAGACC | + |
|
Preference number: 4 (lower is better) Translates to: NILLKHFKTYPLLMDAVAGYIFP*SDRHQT Trigger: GGTCTGGTGTCTGTCACTCCAAGGGAAAATGTATCC...GGCCACTGCATCCATCAATAATGGATAAGTCTTAAAGTGTTTTAGTAAGATGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS-3UTR CCA 90 bp | AACATCTTACTAAAACACTTTAAGACTTATCCATTATTGATGGATGCAGTGGCCGCTCTTGCTCAGCCATaGCTTCAATCTTCTCTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: NILLKHFKTYPLLMDAVAALAQP*LQSSLA Trigger: TGCAAGAGAAGATTGAAGCCATGGCTGAGCAAGAGC...GGCCACTGCATCCATCAATAATGGATAAGTCTTAAAGTGTTTTAGTAAGATGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS-3UTR GCA 90 bp | AAGACTTATCCATTATTGATGGATGCAGTGGCCCACACTTTTAATCCTTTAATTGGCCCAAATCTTTCCTaGAGTACTGTAGAAATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KTYPLLMDAVAHTFNPLIGPNLS*STVEMQ Trigger: CTGCATTTCTACAGTACTGCAGGAAAGATTTGGGCC...AATTAAAGGATTAAAAGTGTGGGCCACTGCATCCATCAATAATGGATAAGTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS-3UTR TCA 90 bp | AACATCTTACTAAAACACTTTAAGACTTATCCATTATTGATGGATGCAGTGGCCATAGGTCATCTGGCTTaGAAAGTTTGGCACCATCAA | + |
|
Preference number: 4 (lower is better) Translates to: NILLKHFKTYPLLMDAVAIGHLA*KVWHHQ Trigger: TTGATGGTGCCAAACTTTTCAAGCCAGATGACCTAT...GGCCACTGCATCCATCAATAATGGATAAGTCTTAAAGTGTTTTAGTAAGATGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS-3UTR TCA 90 bp | AAGACTTATCCATTATTGATGGATGCAGTGGCCCACACTTTTAATCCTTTAATTAGTCCAAGGCTTTCTTaGAATCATACTCATTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: KTYPLLMDAVAHTFNPLISPRLS*NHTHWL Trigger: GAGCCAATGAGTATGATTTCAAGAAAGCCTTGGACT...AATTAAAGGATTAAAAGTGTGGGCCACTGCATCCATCAATAATGGATAAGTCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS-3UTR TCA 90 bp | AACATCTTACTAAAACACTTTAAGACTTATCCATTATTGATGGATGCAGTGGCCTTCAAGTCCAAGTACTaGATGTTGACCCCTTCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: NILLKHFKTYPLLMDAVAFKSKY*MLTPSL Trigger: TAAAGAAGGGGTCAACATTCAGTACTTGGACTTGAA...GGCCACTGCATCCATCAATAATGGATAAGTCTTAAAGTGTTTTAGTAAGATGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS CCA 90 bp | CAGGATGATCCCGTGCTGGCGCATGACTGCTGTGCGGATACCGGATaGACCACTTGTGGCTGTCCATGGCACATACTCTGGCTCCTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: QDDPVLAHDCCADTG*TTCGCPWHILWLLP Trigger: GGGAAGGAGCCAGAGTATGTGCCATGGACAGCCACAAGTGGTCCATCCGGTATCCGCACAGCAGTCATGCGCCAGCACGGGATCATCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS CCA 90 bp | AGCTTCTCCGTGCATACCAGGCAGGCCCACCCACCTTCATCGACATaGACAGAAAGCTGCTCGTCAGCCTCAGCCATTGTCAGGGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SFSVHTRQAHPPSST*TESCSSASAIVRAS Trigger: GGAAGCCCTGACAATGGCTGAGGCTGACGAGCAGCTTTCTGTCCATGTCGATGAAGGTGGGTGGGCCTGCCTGGTATGCACGGAGAAGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS TCA 90 bp | CAGGAACCTGCACATCTTCTCGCCTCCCAAATCCACACAGGTGTCTaGGTAGGTGTCTTCCCTGGCGAGGCTGGGCCAATAGCGGATGGA | + |
|
Preference number: 5 (lower is better) Translates to: QEPAHLLASQIHTGV*VGVFPGEAGPIADG Trigger: TCCATCCGCTATTGGCCCAGCCTCGCCAGGGAAGACACCTACTCAGACACCTGTGTGGATTTGGGAGGCGAGAAGATGTGCAGGTTCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS GCA 90 bp | CTGAGGGTATACCATCTTCAGGATGATCCCGTGCTGGCGCATGACTaGTGTGCGGATACCGGATGGACCACTTGTGGCTGTCCATGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: LRVYHLQDDPVLAHD*CADTGWTTCGCPWH Trigger: GTGCCATGGACAGCCACAAGTGGTCCATCCGGTATCCGCACAGCAGTCATGCGCCAGCACGGGATCATCCTGAAGATGGTATACCCTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS TCA 90 bp | CCCAGCGTGGGTCTGAGGCCGGGTAGTCATCAATCAGGTCCACACTaGTCTGAGTCACGGCCTTGTCTAGCTCAGGGTCCGAATCCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: PSVGLRPGSHQSGPH*SESRPCLAQGPNPN Trigger: ATTTGGATTCGGACCCTGAGCTAGACAAGGCCGTGACTCAGATCAGTGTGGACCTGATTGATGACTACCCGGCCTCAGACCCACGCTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS GCA 90 bp | AGCAGCTGCTCTGGCAGGGTCTCCTGGTGTAGCAGGAAGCGCTCTTaGTCAGCCATGGCTTCAATCTTCTCTTGCAGCCTGTCCTCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: SSCSGRVSWCSRKRS*SAMASIFSCSLSSE Trigger: TTCAGAGGACAGGCTGCAAGAGAAGATTGAAGCCATGGCTGAGCAAGAGCGCTTCCTGCTACACCAGGAGACCCTGCCAGAGCAGCTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS GCA 90 bp | AACACAGGCATTGCACTAAGACTCAGCTGTCTCTCGGTCAGCAGCTaGTCTGGCAGGGTCTCCTGGTGTAGCAGGAAGCGCTCTTGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: NTGIALRLSCLSVSS*SGRVSWCSRKRSCS Trigger: TGAGCAAGAGCGCTTCCTGCTACACCAGGAGACCCTGCCAGAGCAGCTGCTGACCGAGAGACAGCTGAGTCTTAGTGCAATGCCTGTGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS CCA 90 bp | AGGGCCACCAAATCAGCGCTCCCGTGGAAATCGCTAGGGGGCAGCTaGAGTTCTTTGCAGACAGACAACTTAGTGACAGGCGACACAGCA | + |
|
Preference number: 5 (lower is better) Translates to: RATKSALPWKSLGGS*SSLQTDNLVTGDTA Trigger: TGCTGTGTCGCCTGTCACTAAGTTGTCTGTCTGCAAAGAACTCCAGCTGCCCCCTAGCGATTTCCACGGGAGCGCTGATTTGGTGGCCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS-3UTR CAA 90 bp | TTCAGACACACCAGAAGAGGGCCCTGGGACCTATTACAGATGGTAGTGAGCCACATGATCAGTGAGGTGTaGCTCAGCCCAGGGGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: FRHTRRGPWDLLQMVVSHMISEV*LSPGAS Trigger: GGAGGCCCCTGGGCTGAGCAACACCTCACTGATCAT...GTGGCTCACTACCATCTGTAATAGGTCCCAGGGCCCTCTTCTGGTGTGTCTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS TCA 90 bp | GGTAGCAACCATGACAGAAACAGCCTGCACAGAATGGACTTCACCTaGGGTCGCAGCATAAGACAGGGCCACCAAATCAGCGCTCCCGTG | + |
|
Preference number: 5 (lower is better) Translates to: GSNHDRNSLHRMDFT*GRSIRQGHQISAPV Trigger: CACGGGAGCGCTGATTTGGTGGCCCTGTCTTATGCTGCGACCTCAGGTGAAGTCCATTCTGTGCAGGCTGTTTCTGTCATGGTTGCTACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS TCA 90 bp | TCCTTGAGGACAGTATTGACGTCGATCGCCACCTCTGCCCACTCCTaGGAGACCAACGCAACTTCACGCAGGACTTGTTCCTCATGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SLRTVLTSIATSAHS*ETNATSRRTCSSCS Trigger: GGAGCATGAGGAACAAGTCCTGCGTGAAGTTGCGTTGGTCTCTCAGGAGTGGGCAGAGGTGGCGATCGACGTCAATACTGTCCTCAAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS CCA 90 bp | CTGGCAGGGTCTCCTGGTGTAGCAGGAAGCGCTCTTGCTCAGCCATaGCTTCAATCTTCTCTTGCAGCCTGTCCTCTGAAATGTCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LAGSPGVAGSALAQP*LQSSLAACPLKCLK Trigger: CTTCAGACATTTCAGAGGACAGGCTGCAAGAGAAGATTGAAGCCATGGCTGAGCAAGAGCGCTTCCTGCTACACCAGGAGACCCTGCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS TCA 90 bp | GCATCGGTGATGCTCTCCTTCAGGGTCCTGTGCACATCCCAGCTGTaGACCTGCTTCTCTGAAGAATCGTCCAGTTCCCATTTGCTGATG | + |
|
Preference number: 5 (lower is better) Translates to: ASVMLSFRVLCTSQL*TCFSEESSSSHLLM Trigger: CATCAGCAAATGGGAACTGGACGATTCTTCAGAGAAGCAGGTTCACAGCTGGGATGTGCACAGGACCCTGAAGGAGAGCATCACCGATGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS-3UTR CAA 90 bp | CTGTCACTGTCTTCAGACACACCAGAAGAGGGCCCTGGGACCTATTACAGATGGCGGATGGACCCCTCTTaGGTAGCAACCATGACAGAA | + |
|
Preference number: 5 (lower is better) Translates to: LSLSSDTPEEGPGTYYRWRMDPS*VATMTE Trigger: TTCTGTCATGGTTGCTACCAAAGAGGGGTCCATCCG...CCATCTGTAATAGGTCCCAGGGCCCTCTTCTGGTGTGTCTGAAGACAGTGACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS TCA 90 bp | TTTCAGGAATCAATCGAACCAACTGGCTCCCCACGGAGGACAGGATaGAACTTCCTCCCTGCACTGCTGTCAGGAACCTGCACATCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: FQESIEPTGSPRRTG*NFLPALLSGTCTSS Trigger: AGAAGATGTGCAGGTTCCTGACAGCAGTGCAGGGAGGAAGTTTCATCCTGTCCTCCGTGGGGAGCCAGTTGGTTCGATTGATTCCTGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS TCA 90 bp | CGTAGCTGTCCAGGAAGCAGTCAATTAGTGCCACAAGCTGCTCCATaGCAACGTTCCGAAGTTTGCTGTCAGCCTGAGGGTATACCATCT | + |
|
Preference number: 5 (lower is better) Translates to: RSCPGSSQLVPQAAP*QRSEVCCQPEGIPS Trigger: AGATGGTATACCCTCAGGCTGACAGCAAACTTCGGAACGTTGTCATGGAGCAGCTTGTGGCACTAATTGACTGCTTCCTGGACAGCTACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS-3UTR CAA 90 bp | TCAGGTGGAAGAGGAGGAGGAAATACCTTACAGCTGAAAAAGAGCATCAGGGCCAACTTCACGCAGGACTaGTTCCTCATGCTCCAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SGGRGGGNTLQLKKSIRANFTQD*FLMLQE Trigger: CTCCTGGAGCATGAGGAACAAGTCCTGCGTGAAGTT...GGCCCTGATGCTCTTTTTCAGCTGTAAGGTATTTCCTCCTCCTCTTCCACCTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS-3UTR CAA 90 bp | CTGTCACTGTCTTCAGACACACCAGAAGAGGGCCCTGGGACCTATTACAGATGGGATAGGTCATCTGGCTaGAAAAGTTTGGCACCATCA | + |
|
Preference number: 5 (lower is better) Translates to: LSLSSDTPEEGPGTYYRWDRSSG*KSLAPS Trigger: TGATGGTGCCAAACTTTTCAAGCCAGATGACCTATC...CCATCTGTAATAGGTCCCAGGGCCCTCTTCTGGTGTGTCTGAAGACAGTGACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS-3UTR CAA 90 bp | GGACCAACCATGACAGCCCGAAACACCATGAATTTGTCTTGCAGACCTCTGGCTTCGATTGGATCATCTTaGCCATCTGAACCAGACCAG | + |
|
Preference number: 5 (lower is better) Translates to: GPTMTARNTMNLSCRPLASIGSS*PSEPDQ Trigger: CTGGTCTGGTTCAGATGGCAAAGATGATCCAATCGA...AGCCAGAGGTCTGCAAGACAAATTCATGGTGTTTCGGGCTGTCATGGTTGGTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS GCA 90 bp | TGTAGCAGGAAGCGCTCTTGCTCAGCCATGGCTTCAATCTTCTCTTaGAGCCTGTCCTCTGAAATGTCTGAAGCTAAAGCTGCCAGTTTA | + |
|
Preference number: 5 (lower is better) Translates to: CSRKRSCSAMASIFS*SLSSEMSEAKAASL Trigger: TAAACTGGCAGCTTTAGCTTCAGACATTTCAGAGGACAGGCTGCAAGAGAAGATTGAAGCCATGGCTGAGCAAGAGCGCTTCCTGCTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS-3UTR CAA 90 bp | GGTAGTGAGCCACCATGTGGTTGCTGGGAATTGAATTCAAGTCCTCTGGAAGAGTCTAAACAAGCCGACTaGGTGAAGGAAGTCCACCAA | + |
|
Preference number: 5 (lower is better) Translates to: GSEPPCGCWELNSSPLEESKQAD*VKEVHQ Trigger: TTGGTGGACTTCCTTCACCAAGTCGGCTTGTTTAGA...CTCTTCCAGAGGACTTGAATTCAATTCCCAGCAACCACATGGTGGCTCACTACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS-3UTR CAA 90 bp | GCTAAGTACTCACCATTGCCCACACAATACAAAAGGTGGTCGACTGAAGCTCATTGGAGTCGGGCTTGGTaGTCTGTCTGTTCACACATC | + |
|
Preference number: 5 (lower is better) Translates to: AKYSPLPTQYKRWSTEAHWSRAW*SVCSHI Trigger: GATGTGTGAACAGACAGACAACCAAGCCCGACTCCA...ATGAGCTTCAGTCGACCACCTTTTGTATTGTGTGGGCAATGGTGAGTACTTAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS TCA 90 bp | AGCTGTGAACCTGCTTCTCTGAAGAATCGTCCAGTTCCCATTTGCTaGTGTTTGAACTCGTCAGGGTGTAGAAACTTGATCCTCCTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: SCEPASLKNRPVPIC*CLNSSGCRNLILLC Trigger: ACAGAGGAGGATCAAGTTTCTACACCCTGACGAGTTCAAACATCAGCAAATGGGAACTGGACGATTCTTCAGAGAAGCAGGTTCACAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS CCA 90 bp | ATTGGCTCTTCTGTTTTCGTCACAGATATACAGACTGATGAGTTGTaGTGCGGTCAACACAGGCATTGCACTAAGACTCAGCTGTCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: IGSSVFVTDIQTDEL*CGQHRHCTKTQLSL Trigger: GAGAGACAGCTGAGTCTTAGTGCAATGCCTGTGTTGACCGCACCACAACTCATCAGTCTGTATATCTGTGACGAAAACAGAAGAGCCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS-3UTR CAA 90 bp | ATCAGCTTCTCAGAGACTCCCAGAGTGCCACATGCAGAGGGCAATCTGTTTTCCAAGTCCAAGGCTTTCTaGAAATCATACTCATTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: ISFSETPRVPHAEGNLFSKSKAF*KSYSLA Trigger: AGCCAATGAGTATGATTTCAAGAAAGCCTTGGACTT...GGAAAACAGATTGCCCTCTGCATGTGGCACTCTGGGAGTCTCTGAGAAGCTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS TCA 90 bp | AAACACACTGTCTTTAGACACTTCGATTGGATCATCTTTGCCATCTaGACCAGACCAGTCATCTCTCTGCAGTGCTCTGCACAGAATCTC | + |
|
Preference number: 5 (lower is better) Translates to: KHTVFRHFDWIIFAI*TRPVISLQCSAQNL Trigger: GAGATTCTGTGCAGAGCACTGCAGAGAGATGACTGGTCTGGTTCAGATGGCAAAGATGATCCAATCGAAGTGTCTAAAGACAGTGTGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| CDS-3UTR CAA 90 bp | TCAGGTGGAAGAGGAGGAGGAAATACCTTACAGCTGAAAAAGAGCATCAGGGCCTTAAGCAGTTTTGTCTaGTCTTCATGGGCTACAGTT | + |
|
Preference number: 5 (lower is better) Translates to: SGGRGGGNTLQLKKSIRALSSFV*SSWATV Trigger: AACTGTAGCCCATGAAGACAAGACAAAACTGCTTAA...GGCCCTGATGCTCTTTTTCAGCTGTAAGGTATTTCCTCCTCCTCTTCCACCTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| CDS-3UTR CAA 90 bp | AACATCTTACTAAAACACTTTAAGACTTATCCATTATTGATGGATGCAGTGGCCGCAGGAGTCAGGCTGTaGGGAACCTCACACTCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: NILLKHFKTYPLLMDAVAAGVRL*GTSHSL Trigger: GAGGGAGTGTGAGGTTCCCAACAGCCTGACTCCTGC...GGCCACTGCATCCATCAATAATGGATAAGTCTTAAAGTGTTTTAGTAAGATGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| CDS TCA 90 bp | GCACACAAAGACAGCATTCTCCATGTAAAGATAGGTCATCTGGCTTaGAAAGTTTGGCACCATCAATCGACATGCGATCAGGTCTTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: AHKDSILHVKIGHLA*KVWHHQSTCDQVFR Trigger: TCTGAAGACCTGATCGCATGTCGATTGATGGTGCCAAACTTTTCAAGCCAGATGACCTATCTTTACATGGAGAATGCTGTCTTTGTGTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| CDS-3UTR CAA 90 bp | AACATCTTACTAAAACACTTTAAGACTTATCCATTATTGATGGATGCAGTGGCCGCGCTGGAGTCGGGCTaGGTTGTCTGTCTGTTCACA | + |
|
Preference number: 5 (lower is better) Translates to: NILLKHFKTYPLLMDAVAALESG*VVCLFT Trigger: TGTGAACAGACAGACAACCAAGCCCGACTCCAGCGC...GGCCACTGCATCCATCAATAATGGATAAGTCTTAAAGTGTTTTAGTAAGATGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| CDS TCA 90 bp | CATCTTCTTCCTCATCAATGTACTCCAGTAAGTCCAAGGCTTTCTTaGAATCATACTCATTGGCTCTTCTGTTTTCGTCACAGATATACA | + |
|
Preference number: 5 (lower is better) Translates to: HLLPHQCTPVSPRLS*NHTHWLFCFRHRYT Trigger: TGTATATCTGTGACGAAAACAGAAGAGCCAATGAGTATGATTTCAAGAAAGCCTTGGACTTACTGGAGTACATTGATGAGGAAGAAGATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS-3UTR CAA 90 bp | AACATCTTACTAAAACACTTTAAGACTTATCCATTATTGATGGATGCAGTGGCCAACGAGTTTCCATATTaGCCAAACCTAGCAGTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: NILLKHFKTYPLLMDAVANEFPY*PNLAVL Trigger: CAACACTGCTAGGTTTGGCAAATATGGAAACTCGTT...GGCCACTGCATCCATCAATAATGGATAAGTCTTAAAGTGTTTTAGTAAGATGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| CDS CCA 72 bp | CCCGTGCTGGCGCATGACTGCTGTGCGGATACCGGATaGACCACTTGTGGCTGTCCATGGCACATACTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: PVLAHDCCADTG*TTCGCPWHILW Trigger: CCAGAGTATGTGCCATGGACAGCCACAAGTGGTCCATCCGGTATCCGCACAGCAGTCATGCGCCAGCACGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| CDS CCA 72 bp | TGTCTCTCGGTCAGCAGCTGCTCTGGCAGGGTCTCCTaGTGTAGCAGGAAGCGCTCTTGCTCAGCCATGGCT | + |
|
Preference number: 6 (lower is better) Translates to: CLSVSSCSGRVS*CSRKRSCSAMA Trigger: AGCCATGGCTGAGCAAGAGCGCTTCCTGCTACACCAGGAGACCCTGCCAGAGCAGCTGCTGACCGAGAGACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| CDS GCA 72 bp | TGGCTCCCCACGGAGGACAGGATGAAACTTCCTCCCTaGACTGCTGTCAGGAACCTGCACATCTTCTCGCCT | + |
|
Preference number: 6 (lower is better) Translates to: WLPTEDRMKLPP*TAVRNLHIFSP Trigger: AGGCGAGAAGATGTGCAGGTTCCTGACAGCAGTGCAGGGAGGAAGTTTCATCCTGTCCTCCGTGGGGAGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS GCA 72 bp | AAAGGGAAGAAACCCTCCGGCCAATCCCTGAGAGCATaGCTTGGCCCTGGGGCAGGACATGCTGGTGAATCT | + |
|
Preference number: 6 (lower is better) Translates to: KGKKPSGQSLRA*LGPGAGHAGES Trigger: AGATTCACCAGCATGTCCTGCCCCAGGGCCAAGGCATGCTCTCAGGGATTGGCCGGAGGGTTTCTTCCCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS GCA 72 bp | ATTGCACTAAGACTCAGCTGTCTCTCGGTCAGCAGCTaGTCTGGCAGGGTCTCCTGGTGTAGCAGGAAGCGC | + |
|
Preference number: 6 (lower is better) Translates to: IALRLSCLSVSS*SGRVSWCSRKR Trigger: GCGCTTCCTGCTACACCAGGAGACCCTGCCAGAGCAGCTGCTGACCGAGAGACAGCTGAGTCTTAGTGCAAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| CDS CCA 72 bp | GTGCATACCAGGCAGGCCCACCCACCTTCATCGACATaGACAGAAAGCTGCTCGTCAGCCTCAGCCATTGTC | + |
|
Preference number: 6 (lower is better) Translates to: VHTRQAHPPSST*TESCSSASAIV Trigger: GACAATGGCTGAGGCTGACGAGCAGCTTTCTGTCCATGTCGATGAAGGTGGGTGGGCCTGCCTGGTATGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| CDS CCA 72 bp | CCAAATCCACACAGGTGTCTGAGTAGGTGTCTTCCCTaGCGAGGCTGGGCCAATAGCGGATGGACCCCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: PNPHRCLSRCLP*RGWANSGWTPL Trigger: AAGAGGGGTCCATCCGCTATTGGCCCAGCCTCGCCAGGGAAGACACCTACTCAGACACCTGTGTGGATTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS CAA 90 bp | ACCTGGGACACCTCTCGAAAGAAGACATCGGCAGGAGTCAGGCTGTaGGGAACCTCACACTCCCTCTTGTTCAGGGCGAGCAGGATAGCT | + |
|
Preference number: 6 (lower is better) Translates to: TWDTSRKKTSAGVRL*GTSHSLLFRASRIA Trigger: AGCTATCCTGCTCGCCCTGAACAAGAGGGAGTGTGAGGTTCCCAACAGCCTGACTCCTGCCGATGTCTTCTTTCGAGAGGTGTCCCAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS CAA 90 bp | CACCTCTGCCCACTCCTGAGAGACCAACGCAACTTCACGCAGGACTaGTTCCTCATGCTCCAGGAGGCACTCACAGATAGTGTCCACCTG | + |
|
Preference number: 6 (lower is better) Translates to: HLCPLLRDQRNFTQD*FLMLQEALTDSVHL Trigger: CAGGTGGACACTATCTGTGAGTGCCTCCTGGAGCATGAGGAACAAGTCCTGCGTGAAGTTGCGTTGGTCTCTCAGGAGTGGGCAGAGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| CDS TCA 72 bp | GCACATCTTCTCGCCTCCCAAATCCACACAGGTGTCTaGGTAGGTGTCTTCCCTGGCGAGGCTGGGCCAATA | + |
|
Preference number: 6 (lower is better) Translates to: AHLLASQIHTGV*VGVFPGEAGPI Trigger: TATTGGCCCAGCCTCGCCAGGGAAGACACCTACTCAGACACCTGTGTGGATTTGGGAGGCGAGAAGATGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS TCA 72 bp | TCAATCGAACCAACTGGCTCCCCACGGAGGACAGGATaGAACTTCCTCCCTGCACTGCTGTCAGGAACCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SIEPTGSPRRTG*NFLPALLSGTC Trigger: GCAGGTTCCTGACAGCAGTGCAGGGAGGAAGTTTCATCCTGTCCTCCGTGGGGAGCCAGTTGGTTCGATTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| CDS TCA 72 bp | CTCACACTCCCTCTTGTTCAGGGCGAGCAGGATAGCTaGGTTCACCAGGTCTGGCAGTCGAGAGTGGTGGTT | + |
|
Preference number: 6 (lower is better) Translates to: LTLPLVQGEQDS*VHQVWQSRVVV Trigger: AACCACCACTCTCGACTGCCAGACCTGGTGAACTCAGCTATCCTGCTCGCCCTGAACAAGAGGGAGTGTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| CDS GCA 72 bp | TACCATCTTCAGGATGATCCCGTGCTGGCGCATGACTaGTGTGCGGATACCGGATGGACCACTTGTGGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: YHLQDDPVLAHD*CADTGWTTCGC Trigger: ACAGCCACAAGTGGTCCATCCGGTATCCGCACAGCAGTCATGCGCCAGCACGGGATCATCCTGAAGATGGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| CDS GCA 72 bp | TCTGGCAGGGTCTCCTGGTGTAGCAGGAAGCGCTCTTaGTCAGCCATGGCTTCAATCTTCTCTTGCAGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: SGRVSWCSRKRS*SAMASIFSCSL Trigger: CAGGCTGCAAGAGAAGATTGAAGCCATGGCTGAGCAAGAGCGCTTCCTGCTACACCAGGAGACCCTGCCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| CDS CAA 72 bp | ACCTCTCGAAAGAAGACATCGGCAGGAGTCAGGCTGTaGGGAACCTCACACTCCCTCTTGTTCAGGGCGAGC | + |
|
Preference number: 6 (lower is better) Translates to: TSRKKTSAGVRL*GTSHSLLFRAS Trigger: GCTCGCCCTGAACAAGAGGGAGTGTGAGGTTCCCAACAGCCTGACTCCTGCCGATGTCTTCTTTCGAGAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| CDS TCA 72 bp | CAATACTTCTCTGCCAGAGAAGCTGCCCATGGGTACTaGCCTAGTGTGAGAAGGGGCGAGAGCAGCTCGGAT | + |
|
Preference number: 6 (lower is better) Translates to: QYFSAREAAHGY*PSVRRGESSSD Trigger: ATCCGAGCTGCTCTCGCCCCTTCTCACACTAGGTCAGTACCCATGGGCAGCTTCTCTGGCAGAGAAGTATTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| CDS GCA 72 bp | GAGACCAACGCAACTTCACGCAGGACTTGTTCCTCATaGTCCAGGAGGCACTCACAGATAGTGTCCACCTGG | + |
|
Preference number: 6 (lower is better) Translates to: ETNATSRRTCSS*SRRHSQIVSTW Trigger: CCAGGTGGACACTATCTGTGAGTGCCTCCTGGAGCATGAGGAACAAGTCCTGCGTGAAGTTGCGTTGGTCTC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| CDS CCA 72 bp | TCATGCTCCAGGAGGCACTCACAGATAGTGTCCACCTaGGACACCTCTCGAAAGAAGACATCGGCAGGAGTC | + |
|
Preference number: 6 (lower is better) Translates to: SCSRRHSQIVST*DTSRKKTSAGV Trigger: GACTCCTGCCGATGTCTTCTTTCGAGAGGTGTCCCAGGTGGACACTATCTGTGAGTGCCTCCTGGAGCATGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| CDS CAA 72 bp | CTCCCGTGGAAATCGCTAGGGGGCAGCTGGAGTTCTTaGCAGACAGACAACTTAGTGACAGGCGACACAGCA | + |
|
Preference number: 6 (lower is better) Translates to: LPWKSLGGSWSS*QTDNLVTGDTA Trigger: TGCTGTGTCGCCTGTCACTAAGTTGTCTGTCTGCAAAGAACTCCAGCTGCCCCCTAGCGATTTCCACGGGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| CDS GCA 72 bp | CAGACTGATGAGTTGTGGTGCGGTCAACACAGGCATTaGACTAAGACTCAGCTGTCTCTCGGTCAGCAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: QTDELWCGQHRH*TKTQLSLGQQL Trigger: CAGCTGCTGACCGAGAGACAGCTGAGTCTTAGTGCAATGCCTGTGTTGACCGCACCACAACTCATCAGTCTG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| CDS CCA 72 bp | AAATCAGCGCTCCCGTGGAAATCGCTAGGGGGCAGCTaGAGTTCTTTGCAGACAGACAACTTAGTGACAGGC | + |
|
Preference number: 6 (lower is better) Translates to: KSALPWKSLGGS*SSLQTDNLVTG Trigger: GCCTGTCACTAAGTTGTCTGTCTGCAAAGAACTCCAGCTGCCCCCTAGCGATTTCCACGGGAGCGCTGATTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| CDS CAA 72 bp | CCACTCCTGAGAGACCAACGCAACTTCACGCAGGACTaGTTCCTCATGCTCCAGGAGGCACTCACAGATAGT | + |
|
Preference number: 6 (lower is better) Translates to: PLLRDQRNFTQD*FLMLQEALTDS Trigger: ACTATCTGTGAGTGCCTCCTGGAGCATGAGGAACAAGTCCTGCGTGAAGTTGCGTTGGTCTCTCAGGAGTGG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| CDS TCA 72 bp | CATGACAGAAACAGCCTGCACAGAATGGACTTCACCTaGGGTCGCAGCATAAGACAGGGCCACCAAATCAGC | + |
|
Preference number: 6 (lower is better) Translates to: HDRNSLHRMDFT*GRSIRQGHQIS Trigger: GCTGATTTGGTGGCCCTGTCTTATGCTGCGACCTCAGGTGAAGTCCATTCTGTGCAGGCTGTTTCTGTCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| CDS TCA 72 bp | ATGCTCTCCTTCAGGGTCCTGTGCACATCCCAGCTGTaGACCTGCTTCTCTGAAGAATCGTCCAGTTCCCAT | + |
|
Preference number: 6 (lower is better) Translates to: MLSFRVLCTSQL*TCFSEESSSSH Trigger: ATGGGAACTGGACGATTCTTCAGAGAAGCAGGTTCACAGCTGGGATGTGCACAGGACCCTGAAGGAGAGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| CDS TCA 72 bp | CTTCATAGTTACTTTCAGACCCCCAAACAGCATCGGTaGTGCTCTCCTTCAGGGTCCTGTGCACATCCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: LHSYFQTPKQHR*CSPSGSCAHPS Trigger: GCTGGGATGTGCACAGGACCCTGAAGGAGAGCATCACCGATGCTGTTTGGGGGTCTGAAAGTAACTATGAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| CDS CAA 72 bp | GTCAGCAAACTGGGTCATGTAGCGCTGGAGTCGGGCTaGGTTGTCTGTCTGTTCACACATCTGAACCAGGAT | + |
|
Preference number: 6 (lower is better) Translates to: VSKLGHVALESG*VVCLFTHLNQD Trigger: ATCCTGGTTCAGATGTGTGAACAGACAGACAACCAAGCCCGACTCCAGCGCTACATGACCCAGTTTGCTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| CDS CAA 90 bp | AAATCAGCGCTCCCGTGGAAATCGCTAGGGGGCAGCTGGAGTTCTTaGCAGACAGACAACTTAGTGACAGGCGACACAGCAATCTTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: KSALPWKSLGGSWSS*QTDNLVTGDTAIFQ Trigger: TTGGAAGATTGCTGTGTCGCCTGTCACTAAGTTGTCTGTCTGCAAAGAACTCCAGCTGCCCCCTAGCGATTTCCACGGGAGCGCTGATTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| CDS CCA 72 bp | ATCTTTCCTGAGCTTTCAGGAATCAATCGAACCAACTaGCTCCCCACGGAGGACAGGATGAAACTTCCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: IFPELSGINRTN*LPTEDRMKLPP Trigger: GGGAGGAAGTTTCATCCTGTCCTCCGTGGGGAGCCAGTTGGTTCGATTGATTCCTGAAAGCTCAGGAAAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| CDS TCA 72 bp | TTGCTTTCAGAACAAACTCAAAGTAAGAGTTGGACTTaGGGCTTCCCAGCTGCTCTGCTCGCAGTAGGTCCG | + |
|
Preference number: 6 (lower is better) Translates to: LLSEQTQSKSWT*GFPAALLAVGP Trigger: CGGACCTACTGCGAGCAGAGCAGCTGGGAAGCCTCAAGTCCAACTCTTACTTTGAGTTTGTTCTGAAAGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| CDS GCA 72 bp | GCTCGGATCTTTTCTGCAGGTACTCCACTTCCAGACTaGTGTATCGTTCTTGGTCACTGGATTTCTCTAGCG | + |
|
Preference number: 6 (lower is better) Translates to: ARIFSAGTPLPD*CIVLGHWISLA Trigger: CGCTAGAGAAATCCAGTGACCAAGAACGATACAGCAGTCTGGAAGTGGAGTACCTGCAGAAAAGATCCGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| CDS GCA 72 bp | TCATCTTTGCCATCTGAACCAGACCAGTCATCTCTCTaGAGTGCTCTGCACAGAATCTCCAGCTTCAGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: SSLPSEPDQSSL*SALHRISSFRS Trigger: TGACCTGAAGCTGGAGATTCTGTGCAGAGCACTGCAGAGAGATGACTGGTCTGGTTCAGATGGCAAAGATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| CDS CCA 72 bp | TGCAGGTACTCCACTTCCAGACTGCTGTATCGTTCTTaGTCACTGGATTTCTCTAGCGACTTCAGCTGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: CRYSTSRLLYRS*SLDFSSDFSWE Trigger: TTCCCAGCTGAAGTCGCTAGAGAAATCCAGTGACCAAGAACGATACAGCAGTCTGGAAGTGGAGTACCTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| CDS CAA 90 bp | TGTCCCTCTGATTGGATAGGAGCTCAAACGTCTAAACAAGCCGACTaGGTGAAGGAAGTCCACCAAGAGGCAGTGAGCTTTCATCTTGTC | + |
|
Preference number: 6 (lower is better) Translates to: CPSDWIGAQTSKQAD*VKEVHQEAVSFHLV Trigger: GACAAGATGAAAGCTCACTGCCTCTTGGTGGACTTCCTTCACCAAGTCGGCTTGTTTAGACGTTTGAGCTCCTATCCAATCAGAGGGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| CDS TCA 72 bp | CTGCATCTGACATCTGGTTACCATTGTCTTCCACCGTaGTCACAGAGTAATAGACAAGACAGGGGCTGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: LHLTSGYHCLPP*SQSNRQDRGCL Trigger: GAGACAGCCCCTGTCTTGTCTATTACTCTGTGATCACGGTGGAAGACAATGGTAACCAGATGTCAGATGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| CDS TCA 72 bp | GGGGTTATACTGAGTCACTTCTACGGTGACTGCATCTaGCATCTGGTTACCATTGTCTTCCACCGTGATCAC | + |
|
Preference number: 6 (lower is better) Translates to: GVILSHFYGDCI*HLVTIVFHRDH Trigger: GTGATCACGGTGGAAGACAATGGTAACCAGATGTCAGATGCAGTCACCGTAGAAGTGACTCAGTATAACCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| CDS CAA 72 bp | GATTGGATAGGAGCTCAAACGTCTAAACAAGCCGACTaGGTGAAGGAAGTCCACCAAGAGGCAGTGAGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: DWIGAQTSKQAD*VKEVHQEAVSF Trigger: AAAGCTCACTGCCTCTTGGTGGACTTCCTTCACCAAGTCGGCTTGTTTAGACGTTTGAGCTCCTATCCAATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| CDS CAA 90 bp | AAAATTCTGGTCAGCAAACTGGGTCATGTAGCGCTGGAGTCGGGCTaGGTTGTCTGTCTGTTCACACATCTGAACCAGGATATCAAAGTC | + |
|
Preference number: 6 (lower is better) Translates to: KILVSKLGHVALESG*VVCLFTHLNQDIKV Trigger: GACTTTGATATCCTGGTTCAGATGTGTGAACAGACAGACAACCAAGCCCGACTCCAGCGCTACATGACCCAGTTTGCTGACCAGAATTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| CDS CAA 90 bp | CTCATTGGCTCTTCTGTTTTCGTCACAGATATACAGACTGATGAGTaGTGGTGCGGTCAACACAGGCATTGCACTAAGACTCAGCTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: LIGSSVFVTDIQTDE*WCGQHRHCTKTQLS Trigger: AGACAGCTGAGTCTTAGTGCAATGCCTGTGTTGACCGCACCACAACTCATCAGTCTGTATATCTGTGACGAAAACAGAAGAGCCAATGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS TCA 72 bp | GTCTTTAGACACTTCGATTGGATCATCTTTGCCATCTaGACCAGACCAGTCATCTCTCTGCAGTGCTCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: VFRHFDWIIFAI*TRPVISLQCSA Trigger: TGCAGAGCACTGCAGAGAGATGACTGGTCTGGTTCAGATGGCAAAGATGATCCAATCGAAGTGTCTAAAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS CCA 72 bp | AGTAGGTCCGTCACCTCTGGCAAGTACTCGCTGAGCTaGATGCCGTCTTTTATAAGTTTCTGCAAGATCTTT | + |
|
Preference number: 6 (lower is better) Translates to: SRSVTSGKYSLS*MPSFISFCKIF Trigger: AAAGATCTTGCAGAAACTTATAAAAGACGGCATCCAGCTCAGCGAGTACTTGCCAGAGGTGACGGACCTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS TCA 72 bp | CATTGTCAGGGCTTCCATGATCTTAACAGGGAGAGATaGTCCAAACACTCTCACATCGTAGTTCACAGACTC | + |
|
Preference number: 6 (lower is better) Translates to: HCQGFHDLNRER*SKHSHIVVHRL Trigger: GAGTCTGTGAACTACGATGTGAGAGTGTTTGGATCATCTCTCCCTGTTAAGATCATGGAAGCCCTGACAATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS TCA 72 bp | CCTGCTTCTCTGAAGAATCGTCCAGTTCCCATTTGCTaGTGTTTGAACTCGTCAGGGTGTAGAAACTTGATC | + |
|
Preference number: 6 (lower is better) Translates to: PASLKNRPVPIC*CLNSSGCRNLI Trigger: GATCAAGTTTCTACACCCTGACGAGTTCAAACATCAGCAAATGGGAACTGGACGATTCTTCAGAGAAGCAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
||
| CDS CCA 72 bp | TCTGTTTTCGTCACAGATATACAGACTGATGAGTTGTaGTGCGGTCAACACAGGCATTGCACTAAGACTCAG | + |
|
Preference number: 6 (lower is better) Translates to: SVFVTDIQTDEL*CGQHRHCTKTQ Trigger: CTGAGTCTTAGTGCAATGCCTGTGTTGACCGCACCACAACTCATCAGTCTGTATATCTGTGACGAAAACAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| CDS CAA 90 bp | AGCACACAAAGACAGCATTCTCCATGTAAAGATAGGTCATCTGGCTaGAAAAGTTTGGCACCATCAATCGACATGCGATCAGGTCTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: STQRQHSPCKDRSSG*KSLAPSIDMRSGLQ Trigger: CTGAAGACCTGATCGCATGTCGATTGATGGTGCCAAACTTTTCAAGCCAGATGACCTATCTTTACATGGAGAATGCTGTCTTTGTGTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| CDS CAA 90 bp | ATCTTTACAAACACACTGTCTTTAGACACTTCGATTGGATCATCTTaGCCATCTGAACCAGACCAGTCATCTCTCTGCAGTGCTCTGCAC | + |
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Preference number: 6 (lower is better) Translates to: IFTNTLSLDTSIGSS*PSEPDQSSLCSALH Trigger: GTGCAGAGCACTGCAGAGAGATGACTGGTCTGGTTCAGATGGCAAAGATGATCCAATCGAAGTGTCTAAAGACAGTGTGTTTGTAAAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| CDS CAA 72 bp | TCTTCTGTTTTCGTCACAGATATACAGACTGATGAGTaGTGGTGCGGTCAACACAGGCATTGCACTAAGACT | + |
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Preference number: 6 (lower is better) Translates to: SSVFVTDIQTDE*WCGQHRHCTKT Trigger: AGTCTTAGTGCAATGCCTGTGTTGACCGCACCACAACTCATCAGTCTGTATATCTGTGACGAAAACAGAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| CDS CAA 72 bp | AACACACTGTCTTTAGACACTTCGATTGGATCATCTTaGCCATCTGAACCAGACCAGTCATCTCTCTGCAGT | + |
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Preference number: 6 (lower is better) Translates to: NTLSLDTSIGSS*PSEPDQSSLCS Trigger: ACTGCAGAGAGATGACTGGTCTGGTTCAGATGGCAAAGATGATCCAATCGAAGTGTCTAAAGACAGTGTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| CDS CAA 72 bp | AGACAGCATTCTCCATGTAAAGATAGGTCATCTGGCTaGAAAAGTTTGGCACCATCAATCGACATGCGATCA | + |
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Preference number: 6 (lower is better) Translates to: RQHSPCKDRSSG*KSLAPSIDMRS Trigger: TGATCGCATGTCGATTGATGGTGCCAAACTTTTCAAGCCAGATGACCTATCTTTACATGGAGAATGCTGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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| CDS CAA 90 bp | ACATCTTCTTCCTCATCAATGTACTCCAGTAAGTCCAAGGCTTTCTaGAAATCATACTCATTGGCTCTTCTGTTTTCGTCACAGATATAC | + |
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Preference number: 6 (lower is better) Translates to: TSSSSSMYSSKSKAF*KSYSLALLFSSQIY Trigger: GTATATCTGTGACGAAAACAGAAGAGCCAATGAGTATGATTTCAAGAAAGCCTTGGACTTACTGGAGTACATTGATGAGGAAGAAGATGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044795.8 |
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