Pregenerated sensors for NUMB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021224Ensembl transcript IDs: ENSMUST00000021647.14, ENSMUST00000085215.11, ENSMUST00000110298.9, ENSMUST00000117217.8, ENSMUST00000126943.2, ENSMUST00000129335.8, ENSMUST00000135962.8, ENSMUST00000136848.8, ENSMUST00000154043.8, ENSMUST00000155112.8, ENSMUST00000222439.2
Found 324 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACCACACCCACGGGCACAGGCTGGGACGTGAGGAAGGCATGTCCTTaGAAAGGAGGTGCTGGAGGGGCAATGGCGGCGGGCGGAGGCGGC | + |
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Preference number: 1 (lower is better) Translates to: TTPTGTGWDVRKACP*KGGAGGAMAAGGGG Trigger: GCCGCCTCCGCCCGCCGCCATTGCCCCTCCAGCACCTCCTTTCCAAGGACATGCCTTCCTCACGTCCCAGCCTGTGCCCGTGGGTGTGGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 |
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| 3UTR GCA 90 bp | TGGGCAGCTGCTGCTGTGCCCTCCCGTGAACCCAGCAGCATAGCCTaGCTGGCTTCACCCAGCCACACTGTCCCCATCGAGCGATTGCTA | + |
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Preference number: 1 (lower is better) Translates to: WAAAAVPSREPSSIA*LASPSHTVPIERLL Trigger: TAGCAATCGCTCGATGGGGACAGTGTGGCTGGGTGAAGCCAGGCAGGCTATGCTGCTGGGTTCACGGGAGGGCACAGCAGCAGCTGCCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 ENSMUST00000117217.8 |
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| 3UTR CCA 90 bp | CTAGCTGCAGGGCAGTCCTCCCCAGGGAGGCTTGCCTCACTTCTGTaGACGTCACCCCTTGCTGGACTGTGCTTGGACTTGCTCCTTGGG | + |
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Preference number: 1 (lower is better) Translates to: LAAGQSSPGRLASLL*TSPLAGLCLDLLLG Trigger: CCCAAGGAGCAAGTCCAAGCACAGTCCAGCAAGGGGTGACGTCCACAGAAGTGAGGCAAGCCTCCCTGGGGAGGACTGCCCTGCAGCTAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 ENSMUST00000117217.8 |
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| 3UTR CCA 90 bp | GTCAGCTTCAGAGGGAGTGCGTCTGTGACCAGCCTGGAAGAGACCTaGAGAGGCAGCACCAGAAGACTGACCCCACTCAGTCCCCGGATG | + |
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Preference number: 1 (lower is better) Translates to: VSFRGSASVTSLEET*RGSTRRLTPLSPRM Trigger: CATCCGGGGACTGAGTGGGGTCAGTCTTCTGGTGCTGCCTCTCCAGGTCTCTTCCAGGCTGGTCACAGACGCACTCCCTCTGAAGCTGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 |
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| 3UTR CCA 90 bp | GAGGAGAAGGGGTCCTCAGAGGGCGTGCTGAAGGCACTGGTGATCTaGGAACACAAGGAGCTGATGCTCTCGGCCTCTCCTTCCACCTCG | + |
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Preference number: 1 (lower is better) Translates to: EEKGSSEGVLKALVI*EHKELMLSASPSTS Trigger: CGAGGTGGAAGGAGAGGCCGAGAGCATCAGCTCCTTGTGTTCCCAGATCACCAGTGCCTTCAGCACGCCCTCTGAGGACCCCTTCTCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110298.9 |
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| 3UTR GCA 90 bp | GGCCAGGCTTGGCGACTGATGTGGATGAGTTGTCTGAGGGTGGCCTaGAGTGCCAAACACATTGGCTACCATCTGGGATGGGGTGATGCC | + |
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Preference number: 1 (lower is better) Translates to: GQAWRLMWMSCLRVA*SAKHIGYHLGWGDA Trigger: GGCATCACCCCATCCCAGATGGTAGCCAATGTGTTTGGCACTGCAGGCCACCCTCAGACAACTCATCCACATCAGTCGCCAAGCCTGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 |
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| 3UTR GCA 90 bp | TTTCTAGTGCGGCCCACTGAGCTTCGAAAGGATCCACTGGGCAGGTaGCTGGAGGGACTTCTGCATGCCTGTTTCCTGAGGCTAGCCCAC | + |
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Preference number: 1 (lower is better) Translates to: FLVRPTELRKDPLGR*LEGLLHACFLRLAH Trigger: GTGGGCTAGCCTCAGGAAACAGGCATGCAGAAGTCCCTCCAGGCACCTGCCCAGTGGATCCTTTCGAAGCTCAGTGGGCCGCACTAGAAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 |
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| 3UTR GCA 90 bp | CACTCTTTGACACTTCTTCTAACCAGCGGTCAGCTTCAGAGGGAGTaGGTCTGTGACCAGCCTGGAAGAGACCTGGAGAGGCAGCACCAG | + |
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Preference number: 1 (lower is better) Translates to: HSLTLLLTSGQLQRE*VCDQPGRDLERQHQ Trigger: CTGGTGCTGCCTCTCCAGGTCTCTTCCAGGCTGGTCACAGACGCACTCCCTCTGAAGCTGACCGCTGGTTAGAAGAAGTGTCAAAGAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 |
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| 3UTR CCA 90 bp | GATTGTTCATCTCTGAAGATGCAGTGCCATCCGGAGTGGGAGAGGTaGGAGAGGATGGGGATGGAGCAGTGTTGCCAGGAGCCACTGATG | + |
|
Preference number: 1 (lower is better) Translates to: DCSSLKMQCHPEWER*ERMGMEQCCQEPLM Trigger: CATCAGTGGCTCCTGGCAACACTGCTCCATCCCCATCCTCTCCCACCTCTCCCACTCCGGATGGCACTGCATCTTCAGAGATGAACAATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110298.9 |
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| 3UTR TCA 90 bp | GAAGGATTTGTACGCTGCTTGGACTTGCTTTCTAGTGCGGCCCACTaGGCTTCGAAAGGATCCACTGGGCAGGTGCCTGGAGGGACTTCT | + |
|
Preference number: 1 (lower is better) Translates to: EGFVRCLDLLSSAAH*ASKGSTGQVPGGTS Trigger: AGAAGTCCCTCCAGGCACCTGCCCAGTGGATCCTTTCGAAGCTCAGTGGGCCGCACTAGAAAGCAAGTCCAAGCAGCGTACAAATCCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 |
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| 3UTR GCA 90 bp | GGGAGGCTTGCCTCACTTCTGTGGACGTCACCCCTTGCTGGACTGTaGTTGGACTTGCTCCTTGGGACCTCTGGGATTAGTGAAAAGTGT | + |
|
Preference number: 1 (lower is better) Translates to: GRLASLLWTSPLAGL*LDLLLGTSGISEKC Trigger: ACACTTTTCACTAATCCCAGAGGTCCCAAGGAGCAAGTCCAAGCACAGTCCAGCAAGGGGTGACGTCCACAGAAGTGAGGCAAGCCTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 ENSMUST00000117217.8 |
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| 3UTR CCA 90 bp | CCCGGATGTATGGCTGCAATTTCCTTGTTAGCAGCATCAGGGACATaGGCCCAGGGGTTGGTTTCACGGACAGGCATTGCTACGTGTGCT | + |
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Preference number: 1 (lower is better) Translates to: PGCMAAISLLAASGT*AQGLVSRTGIATCA Trigger: AGCACACGTAGCAATGCCTGTCCGTGAAACCAACCCCTGGGCCCATGTCCCTGATGCTGCTAACAAGGAAATTGCAGCCATACATCCGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 |
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| 3UTR CCA 90 bp | GGCTTGCCTCACTTCTGTGGACGTCACCCCTTGCTGGACTGTGCTTaGACTTGCTCCTTGGGACCTCTGGGATTAGTGAAAAGTGTGCTG | + |
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Preference number: 1 (lower is better) Translates to: GLPHFCGRHPLLDCA*TCSLGPLGLVKSVL Trigger: CAGCACACTTTTCACTAATCCCAGAGGTCCCAAGGAGCAAGTCCAAGCACAGTCCAGCAAGGGGTGACGTCCACAGAAGTGAGGCAAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 ENSMUST00000117217.8 |
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| 3UTR CCA 90 bp | AACTCAAAATGGAAGCTCAGCTTTATCCCCAGACTACAGCTCTACTaGGCAGCTGCTGCTGTGCCCTCCCGTGAACCCAGCAGCATAGCC | + |
|
Preference number: 1 (lower is better) Translates to: NSKWKLSFIPRLQLY*AAAAVPSREPSSIA Trigger: GGCTATGCTGCTGGGTTCACGGGAGGGCACAGCAGCAGCTGCCCAGTAGAGCTGTAGTCTGGGGATAAAGCTGAGCTTCCATTTTGAGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 ENSMUST00000117217.8 |
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| 3UTR TCA 90 bp | GGTGACATCTTCTGGCTAAGAGCAGGAAATCCCCGGAAAGAGCCTTaGCGAGCAAGCTGTTCAATTGGTGCATGCCGGCGTGGGATAGCA | + |
|
Preference number: 1 (lower is better) Translates to: GDIFWLRAGNPRKEP*RASCSIGACRRGIA Trigger: TGCTATCCCACGCCGGCATGCACCAATTGAACAGCTTGCTCGTCAAGGCTCTTTCCGGGGATTTCCTGCTCTTAGCCAGAAGATGTCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110298.9 |
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| 3UTR GCA 90 bp | GCTTCGAAAGGATCCACTGGGCAGGTGCCTGGAGGGACTTCTGCATaGCTGTTTCCTGAGGCTAGCCCACCATTGTCTACACCATTGAAA | + |
|
Preference number: 1 (lower is better) Translates to: ASKGSTGQVPGGTSA*LFPEASPPLSTPLK Trigger: TTTCAATGGTGTAGACAATGGTGGGCTAGCCTCAGGAAACAGGCATGCAGAAGTCCCTCCAGGCACCTGCCCAGTGGATCCTTTCGAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 |
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| 3UTR GCA 90 bp | CCTCACTTCTGTGGACGTCACCCCTTGCTGGACTGTGCTTGGACTTaGTCCTTGGGACCTCTGGGATTAGTGAAAAGTGTGCTGATCTGG | + |
|
Preference number: 1 (lower is better) Translates to: PHFCGRHPLLDCAWT*SLGPLGLVKSVLIW Trigger: CCAGATCAGCACACTTTTCACTAATCCCAGAGGTCCCAAGGAGCAAGTCCAAGCACAGTCCAGCAAGGGGTGACGTCCACAGAAGTGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 ENSMUST00000117217.8 |
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| 3UTR CCA 90 bp | ACTACTTGTCTCATATTGAGGGAATGTCTGCTGCTTGGCCAGGCTTaGCGACTGATGTGGATGAGTTGTCTGAGGGTGGCCTGCAGTGCC | + |
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Preference number: 1 (lower is better) Translates to: TTCLILRECLLLGQA*RLMWMSCLRVACSA Trigger: GGCACTGCAGGCCACCCTCAGACAACTCATCCACATCAGTCGCCAAGCCTGGCCAAGCAGCAGACATTCCCTCAATATGAGACAAGTAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 |
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| 3UTR CCA 90 bp | CAGCCACACTGTCCCCATCGAGCGATTGCTAAGACAGCCCAGGACTaGGAGGAACGGGTGACTGGCCTGAAAAATAAAGGGAGATTGTTT | + |
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Preference number: 1 (lower is better) Translates to: QPHCPHRAIAKTAQD*EERVTGLKNKGRLF Trigger: AAACAATCTCCCTTTATTTTTCAGGCCAGTCACCCGTTCCTCCCAGTCCTGGGCTGTCTTAGCAATCGCTCGATGGGGACAGTGTGGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 ENSMUST00000117217.8 |
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| 3UTR CCA 90 bp | ACTTGCTCCTTGGGACCTCTGGGATTAGTGAAAAGTGTGCTGATCTaGAAAGCAAACAAAGTCCCCTTTGCTCCTTTGCCCTCCACCCCC | + |
|
Preference number: 1 (lower is better) Translates to: TCSLGPLGLVKSVLI*KANKVPFAPLPSTP Trigger: GGGGGTGGAGGGCAAAGGAGCAAAGGGGACTTTGTTTGCTTTCCAGATCAGCACACTTTTCACTAATCCCAGAGGTCCCAAGGAGCAAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 ENSMUST00000117217.8 |
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| 3UTR CCA 90 bp | GCTACGTGTGCTAGAGCAGTATTGGCTGGCTTAGCAGTAAGCACATaGGAGGCTGAGTCAGTGCCATTAGCTTGTAACACAGGAGACTGT | + |
|
Preference number: 1 (lower is better) Translates to: ATCARAVLAGLAVST*EAESVPLACNTGDC Trigger: ACAGTCTCCTGTGTTACAAGCTAATGGCACTGACTCAGCCTCCCATGTGCTTACTGCTAAGCCAGCCAATACTGCTCTAGCACACGTAGC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110298.9 |
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| 3UTR TCA 90 bp | CCACCATTGTCTACACCATTGAAAGCTGCAGAACCATTGAGGTGCTaGGCAGGAGGCTTAAAGAAGGGACTGGTGGTAGCACTACTTGTC | + |
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Preference number: 1 (lower is better) Translates to: PPLSTPLKAAEPLRC*AGGLKKGLVVALLV Trigger: GACAAGTAGTGCTACCACCAGTCCCTTCTTTAAGCCTCCTGCTCAGCACCTCAATGGTTCTGCAGCTTTCAATGGTGTAGACAATGGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 |
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| 3UTR GCA 90 bp | TGTGCTTTGAATACAGATTCCTCTTCAGATCTTCTGCCTCTCTGCTaGCAGAGATTTGTTAGGGTCAGAGGGGCCAGAAGGCCAGGTTTC | + |
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Preference number: 1 (lower is better) Translates to: CALNTDSSSDLLPLC*QRFVRVRGARRPGF Trigger: GAAACCTGGCCTTCTGGCCCCTCTGACCCTAACAAATCTCTGGCAGCAGAGAGGCAGAAGATCTGAAGAGGAATCTGTATTCAAAGCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 ENSMUST00000117217.8 |
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| 3UTR CCA 90 bp | TTCCTCTGCATAGTGGAAGGCAACTCATTGATGCGTAGGGACAGCTaGCGTTTAAAGGGTGACATCTTCTGGCTAAGAGCAGGAAATCCC | + |
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Preference number: 1 (lower is better) Translates to: FLCIVEGNSLMRRDS*RLKGDIFWLRAGNP Trigger: GGGATTTCCTGCTCTTAGCCAGAAGATGTCACCCTTTAAACGCCAGCTGTCCCTACGCATCAATGAGTTGCCTTCCACTATGCAGAGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110298.9 |
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| 3UTR GCA 90 bp | AAATGTGCTTTGAATACAGATTCCTCTTCAGATCTTCTGCCTCTCTaGTGCCAGAGATTTGTTAGGGTCAGAGGGGCCAGAAGGCCAGGT | + |
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Preference number: 1 (lower is better) Translates to: KCALNTDSSSDLLPL*CQRFVRVRGARRPG Trigger: ACCTGGCCTTCTGGCCCCTCTGACCCTAACAAATCTCTGGCAGCAGAGAGGCAGAAGATCTGAAGAGGAATCTGTATTCAAAGCACATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 ENSMUST00000117217.8 |
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| 3UTR GCA 90 bp | GATGGACCAACAACTGTCTTGTCTGTCTCAGCTTTCTTGGCATCTTaGAACTGTTTCATGATCTCCTCTCTTTCGGCTTGCTCAGTGGCA | + |
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Preference number: 1 (lower is better) Translates to: DGPTTVLSVSAFLAS*NCFMISSLSACSVA Trigger: TGCCACTGAGCAAGCCGAAAGAGAGGAGATCATGAAACAGTTGCAAGATGCCAAGAAAGCTGAGACAGACAAGACAGTTGTTGGTCCATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110298.9 |
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| 3UTR GCA 90 bp | TTCTTGGCATCTTGCAACTGTTTCATGATCTCCTCTCTTTCGGCTTaGTCAGTGGCAGTTGTGACACGGAATGATCCTTCTCTTGTGAAA | + |
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Preference number: 1 (lower is better) Translates to: FLASCNCFMISSLSA*SVAVVTRNDPSLVK Trigger: TTTCACAAGAGAAGGATCATTCCGTGTCACAACTGCCACTGAGCAAGCCGAAAGAGAGGAGATCATGAAACAGTTGCAAGATGCCAAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110298.9 |
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| 3UTR TCA 90 bp | ATTGTTTTGCTTCCTGTTATGTTTTATATTCCAGTAAATGTGCTTTaGATACAGATTCCTCTTCAGATCTTCTGCCTCTCTGCTGCCAGA | + |
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Preference number: 1 (lower is better) Translates to: IVLLPVMFYIPVNVL*IQIPLQIFCLSAAR Trigger: TCTGGCAGCAGAGAGGCAGAAGATCTGAAGAGGAATCTGTATTCAAAGCACATTTACTGGAATATAAAACATAACAGGAAGCAAAACAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 ENSMUST00000117217.8 |
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| 3UTR CAA 90 bp | GACCACACCCACGGGCACAGGCTGGGACGTGAGGAAGGCATGTCCTaGGAAAGGAGGTGCTGGAGGGGCAATGGCGGCGGGCGGAGGCGG | + |
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Preference number: 2 (lower is better) Translates to: DHTHGHRLGREEGMS*ERRCWRGNGGGRRR Trigger: CCGCCTCCGCCCGCCGCCATTGCCCCTCCAGCACCTCCTTTCCAAGGACATGCCTTCCTCACGTCCCAGCCTGTGCCCGTGGGTGTGGTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 |
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| 3UTR-3UTR CCA 90 bp | GTGCGGCCCACTGAGCTTCGAAAGGATCCACTGGGCAGGTGCCTGGAGGGACTTGCGGGCGGAGGCGGCTaGAGAACTGGCTGCAGAGGG | + |
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Preference number: 2 (lower is better) Translates to: VRPTELRKDPLGRCLEGLAGGGG*RTGCRG Trigger: CCCTCTGCAGCCAGTTCTCCAGCCGCCTCCGCCCGC...AAGTCCCTCCAGGCACCTGCCCAGTGGATCCTTTCGAAGCTCAGTGGGCCGCAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 |
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| 3UTR-3UTR CCA 90 bp | GGGTGGCCTGCAGTGCCAAACACATTGGCTACCATCTGGGATGGGGTGATGCCCGCGGGCGGAGGCGGCTaGAGAACTGGCTGCAGAGGG | + |
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Preference number: 2 (lower is better) Translates to: GWPAVPNTLATIWDGVMPAGGGG*RTGCRG Trigger: CCCTCTGCAGCCAGTTCTCCAGCCGCCTCCGCCCGC...GGGCATCACCCCATCCCAGATGGTAGCCAATGTGTTTGGCACTGCAGGCCACCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 |
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| 3UTR-3UTR TCA 90 bp | GCTTCGAAAGGATCCACTGGGCAGGTGCCTGGAGGGACTTCTGCATGCCTGTTTGGGGCAGCTGAGACCTaGGGCTGCTGGGCCCGCACA | + |
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Preference number: 2 (lower is better) Translates to: ASKGSTGQVPGGTSACLFGAAET*GCWART Trigger: TGTGCGGGCCCAGCAGCCTCAGGTCTCAGCTGCCCC...AAACAGGCATGCAGAAGTCCCTCCAGGCACCTGCCCAGTGGATCCTTTCGAAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 |
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| 3UTR-3UTR TCA 90 bp | CAGCATAGCCTGCCTGGCTTCACCCAGCCACACTGTCCCCATCGAGCGATTGCTGCAGCACCAGAAGACTaGCCCCACTCAGTCCCCGGA | + |
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Preference number: 2 (lower is better) Translates to: QHSLPGFTQPHCPHRAIAAAPED*PHSVPG Trigger: TCCGGGGACTGAGTGGGGTCAGTCTTCTGGTGCTGC...AGCAATCGCTCGATGGGGACAGTGTGGCTGGGTGAAGCCAGGCAGGCTATGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 |
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| 3UTR-3UTR TCA 90 bp | GGAAGGCATGTCCTTGGAAAGGAGGTGCTGGAGGGGCAATGGCGGCGGGCGGAGAAGCACATGGGAGGCTaGGTCAGTGCCATTAGCTTG | + |
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Preference number: 2 (lower is better) Translates to: GRHVLGKEVLEGQWRRAEKHMGG*VSAISL Trigger: CAAGCTAATGGCACTGACTCAGCCTCCCATGTGCTT...CTCCGCCCGCCGCCATTGCCCCTCCAGCACCTCCTTTCCAAGGACATGCCTTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110298.9 |
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| 3UTR-3UTR GCA 90 bp | CAGCATAGCCTGCCTGGCTTCACCCAGCCACACTGTCCCCATCGAGCGATTGCTCTCCCCAGGGAGGCTTaGCTCACTTCTGTGGACGTC | + |
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Preference number: 2 (lower is better) Translates to: QHSLPGFTQPHCPHRAIALPREA*LTSVDV Trigger: GACGTCCACAGAAGTGAGGCAAGCCTCCCTGGGGAG...AGCAATCGCTCGATGGGGACAGTGTGGCTGGGTGAAGCCAGGCAGGCTATGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 ENSMUST00000117217.8 |
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| 3UTR-3UTR GCA 90 bp | GGAAGGCATGTCCTTGGAAAGGAGGTGCTGGAGGGGCAATGGCGGCGGGCGGAGAAGCTGTTCAATTGGTaGATGCCGGCGTGGGATAGC | + |
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Preference number: 2 (lower is better) Translates to: GRHVLGKEVLEGQWRRAEKLFNW*MPAWDS Trigger: GCTATCCCACGCCGGCATGCACCAATTGAACAGCTT...CTCCGCCCGCCGCCATTGCCCCTCCAGCACCTCCTTTCCAAGGACATGCCTTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110298.9 |
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| 3UTR-3UTR GCA 90 bp | GGAAGGCATGTCCTTGGAAAGGAGGTGCTGGAGGGGCAATGGCGGCGGGCGGAGTCCTCTCTTTCGGCTTaGTCAGTGGCAGTTGTGACA | + |
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Preference number: 2 (lower is better) Translates to: GRHVLGKEVLEGQWRRAESSLSA*SVAVVT Trigger: TGTCACAACTGCCACTGAGCAAGCCGAAAGAGAGGA...CTCCGCCCGCCGCCATTGCCCCTCCAGCACCTCCTTTCCAAGGACATGCCTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110298.9 |
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| 3UTR-3UTR CCA 90 bp | GTGCGGCCCACTGAGCTTCGAAAGGATCCACTGGGCAGGTGCCTGGAGGGACTTAGGAAGGCATGTCCTTaGAAAGGAGGTGCTGGAGGG | + |
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Preference number: 2 (lower is better) Translates to: VRPTELRKDPLGRCLEGLRKACP*KGGAGG Trigger: CCCTCCAGCACCTCCTTTCCAAGGACATGCCTTCCT...AAGTCCCTCCAGGCACCTGCCCAGTGGATCCTTTCGAAGCTCAGTGGGCCGCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 |
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| 3UTR-3UTR CCA 90 bp | TCCCGTGAACCCAGCAGCATAGCCTGCCTGGCTTCACCCAGCCACACTGTCCCCTTGCTGGACTGTGCTTaGACTTGCTCCTTGGGACCT | + |
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Preference number: 2 (lower is better) Translates to: SREPSSIACLASPSHTVPLLDCA*TCSLGP Trigger: AGGTCCCAAGGAGCAAGTCCAAGCACAGTCCAGCAA...GGGGACAGTGTGGCTGGGTGAAGCCAGGCAGGCTATGCTGCTGGGTTCACGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 ENSMUST00000117217.8 |
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| 3UTR-3UTR GCA 90 bp | AGCCTGCCTGGCTTCACCCAGCCACACTGTCCCCATCGAGCGATTGCTAAGACAGATCCACTGGGCAGGTaGCTGGAGGGACTTCTGCAT | + |
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Preference number: 2 (lower is better) Translates to: SLPGFTQPHCPHRAIAKTDPLGR*LEGLLH Trigger: ATGCAGAAGTCCCTCCAGGCACCTGCCCAGTGGATC...TGTCTTAGCAATCGCTCGATGGGGACAGTGTGGCTGGGTGAAGCCAGGCAGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 |
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| 3UTR-3UTR GCA 90 bp | AGCCTGCCTGGCTTCACCCAGCCACACTGTCCCCATCGAGCGATTGCTAAGACACCCCTTGCTGGACTGTaGTTGGACTTGCTCCTTGGG | + |
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Preference number: 2 (lower is better) Translates to: SLPGFTQPHCPHRAIAKTPLAGL*LDLLLG Trigger: CCCAAGGAGCAAGTCCAAGCACAGTCCAGCAAGGGG...TGTCTTAGCAATCGCTCGATGGGGACAGTGTGGCTGGGTGAAGCCAGGCAGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 ENSMUST00000117217.8 |
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| 3UTR-3UTR CCA 90 bp | GGGTGGCCTGCAGTGCCAAACACATTGGCTACCATCTGGGATGGGGTGATGCCCGGAATGTCTGCTGCTTaGCCAGGCTTGGCGACTGAT | + |
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Preference number: 2 (lower is better) Translates to: GWPAVPNTLATIWDGVMPGMSAA*PGLATD Trigger: ATCAGTCGCCAAGCCTGGCCAAGCAGCAGACATTCC...GGGCATCACCCCATCCCAGATGGTAGCCAATGTGTTTGGCACTGCAGGCCACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 |
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| 3UTR-3UTR CCA 90 bp | CAGCATAGCCTGCCTGGCTTCACCCAGCCACACTGTCCCCATCGAGCGATTGCTCTTGCCTCACTTCTGTaGACGTCACCCCTTGCTGGA | + |
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Preference number: 2 (lower is better) Translates to: QHSLPGFTQPHCPHRAIALASLL*TSPLAG Trigger: TCCAGCAAGGGGTGACGTCCACAGAAGTGAGGCAAG...AGCAATCGCTCGATGGGGACAGTGTGGCTGGGTGAAGCCAGGCAGGCTATGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 ENSMUST00000117217.8 |
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| 3UTR-3UTR CCA 90 bp | CGAAAGGATCCACTGGGCAGGTGCCTGGAGGGACTTCTGCATGCCTGTTTCCTGAGACTACAGCTCTACTaGGCAGCTGCTGCTGTGCCC | + |
|
Preference number: 2 (lower is better) Translates to: RKDPLGRCLEGLLHACFLRLQLY*AAAAVP Trigger: GGGCACAGCAGCAGCTGCCCAGTAGAGCTGTAGTCT...CAGGAAACAGGCATGCAGAAGTCCCTCCAGGCACCTGCCCAGTGGATCCTTTCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 |
||
| 3UTR-3UTR GCA 90 bp | AGCCTGCCTGGCTTCACCCAGCCACACTGTCCCCATCGAGCGATTGCTAAGACAGAGGGTGGCCTGCAGTaGCAAACACATTGGCTACCA | + |
|
Preference number: 2 (lower is better) Translates to: SLPGFTQPHCPHRAIAKTEGGLQ*QTHWLP Trigger: TGGTAGCCAATGTGTTTGGCACTGCAGGCCACCCTC...TGTCTTAGCAATCGCTCGATGGGGACAGTGTGGCTGGGTGAAGCCAGGCAGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 |
||
| 3UTR-3UTR GCA 90 bp | GTGCGGCCCACTGAGCTTCGAAAGGATCCACTGGGCAGGTGCCTGGAGGGACTTTCCACCCCCTGCTCTTaGCTAAGTACAGAAAACACC | + |
|
Preference number: 2 (lower is better) Translates to: VRPTELRKDPLGRCLEGLSTPCS*LSTENT Trigger: GGTGTTTTCTGTACTTAGGCAAGAGCAGGGGGTGGA...AAGTCCCTCCAGGCACCTGCCCAGTGGATCCTTTCGAAGCTCAGTGGGCCGCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 |
||
| 3UTR-3UTR GCA 90 bp | TGGACTTGCTTTCTAGTGCGGCCCACTGAGCTTCGAAAGGATCCACTGGGCAGGGGGATGGAGCAGTGTTaGCAGGAGCCACTGATGGAC | + |
|
Preference number: 2 (lower is better) Translates to: WTCFLVRPTELRKDPLGRGMEQC*QEPLMD Trigger: GTCCATCAGTGGCTCCTGGCAACACTGCTCCATCCC...CCTGCCCAGTGGATCCTTTCGAAGCTCAGTGGGCCGCACTAGAAAGCAAGTCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110298.9 |
||
| 3UTR-3UTR CCA 90 bp | ACTTCTGTGGACGTCACCCCTTGCTGGACTGTGCTTGGACTTGCTCCTTGGGACAGGCACATTAGAGGCTaGGTAGGGCATCCCGTTGGC | + |
|
Preference number: 2 (lower is better) Translates to: TSVDVTPCWTVLGLAPWDRHIRG*VGHPVG Trigger: GCCAACGGGATGCCCTACCCAGCCTCTAATGTGCCT...GTCCCAAGGAGCAAGTCCAAGCACAGTCCAGCAAGGGGTGACGTCCACAGAAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 |
||
| 3UTR-3UTR CCA 90 bp | CAGCATAGCCTGCCTGGCTTCACCCAGCCACACTGTCCCCATCGAGCGATTGCTTTGCTGGACTGTGCTTaGACTTGCTCCTTGGGACCT | + |
|
Preference number: 2 (lower is better) Translates to: QHSLPGFTQPHCPHRAIALLDCA*TCSLGP Trigger: AGGTCCCAAGGAGCAAGTCCAAGCACAGTCCAGCAA...AGCAATCGCTCGATGGGGACAGTGTGGCTGGGTGAAGCCAGGCAGGCTATGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 ENSMUST00000117217.8 |
||
| 3UTR-3UTR CCA 90 bp | TTGTCTGAGGGTGGCCTGCAGTGCCAAACACATTGGCTACCATCTGGGATGGGGCACTGGTTTGGTCATTaGGGCGGAGGAGAAGGGGTC | + |
|
Preference number: 2 (lower is better) Translates to: LSEGGLQCQTHWLPSGMGHWFGH*GGGEGV Trigger: GACCCCTTCTCCTCCGCCCCAATGACCAAACCAGTG...CCCCATCCCAGATGGTAGCCAATGTGTTTGGCACTGCAGGCCACCCTCAGACAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110298.9 |
||
| 3UTR CAA 90 bp | TTAGCTTGTAACACAGGAGACTGTGGTGCCACCAATGTCACTGGTTaGGTCATTGGGGCGGAGGAGAAGGGGTCCTCAGAGGGCGTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: LACNTGDCGATNVTG*VIGAEEKGSSEGVL Trigger: CAGCACGCCCTCTGAGGACCCCTTCTCCTCCGCCCCAATGACCAAACCAGTGACATTGGTGGCACCACAGTCTCCTGTGTTACAAGCTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110298.9 |
||
| 3UTR-3UTR TCA 90 bp | AGCCTGCCTGGCTTCACCCAGCCACACTGTCCCCATCGAGCGATTGCTAAGACAGTTGCCAGGAGCCACTaGTGGACCAACAACTGTCTT | + |
|
Preference number: 2 (lower is better) Translates to: SLPGFTQPHCPHRAIAKTVARSH*WTNNCL Trigger: AAGACAGTTGTTGGTCCATCAGTGGCTCCTGGCAAC...TGTCTTAGCAATCGCTCGATGGGGACAGTGTGGCTGGGTGAAGCCAGGCAGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110298.9 |
||
| 3UTR-3UTR GCA 90 bp | GGGTGGCCTGCAGTGCCAAACACATTGGCTACCATCTGGGATGGGGTGATGCCCTCCACCCCCTGCTCTTaGCTAAGTACAGAAAACACC | + |
|
Preference number: 2 (lower is better) Translates to: GWPAVPNTLATIWDGVMPSTPCS*LSTENT Trigger: GGTGTTTTCTGTACTTAGGCAAGAGCAGGGGGTGGA...GGGCATCACCCCATCCCAGATGGTAGCCAATGTGTTTGGCACTGCAGGCCACCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 |
||
| 3UTR-3UTR CCA 90 bp | GCCAGAAGGCCAGGTTTCCTTGGCTTCTCTAGCCTAGCTGCAGGGCAGTCCTCCAGATCCATCGCCGAGTaGTGCCATCACGACATATGT | + |
|
Preference number: 2 (lower is better) Translates to: ARRPGFLGFSSLAAGQSSRSIAE*CHHDIC Trigger: ACATATGTCGTGATGGCACCACTCGGCGATGGATCT...GGAGGACTGCCCTGCAGCTAGGCTAGAGAAGCCAAGGAAACCTGGCCTTCTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110298.9 |
||
| 3UTR CAA 90 bp | GGAATGTCTGCTGCTTGGCCAGGCTTGGCGACTGATGTGGATGAGTaGTCTGAGGGTGGCCTGCAGTGCCAAACACATTGGCTACCATCT | + |
|
Preference number: 2 (lower is better) Translates to: GMSAAWPGLATDVDE*SEGGLQCQTHWLPS Trigger: AGATGGTAGCCAATGTGTTTGGCACTGCAGGCCACCCTCAGACAACTCATCCACATCAGTCGCCAAGCCTGGCCAAGCAGCAGACATTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 |
||
| 3UTR CAA 90 bp | GCAAGCTGTTCAATTGGTGCATGCCGGCGTGGGATAGCATGGGGATaGTTCATCTCTGAAGATGCAGTGCCATCCGGAGTGGGAGAGGTG | + |
|
Preference number: 2 (lower is better) Translates to: ASCSIGACRRGIAWG*FISEDAVPSGVGEV Trigger: CACCTCTCCCACTCCGGATGGCACTGCATCTTCAGAGATGAACAATCCCCATGCTATCCCACGCCGGCATGCACCAATTGAACAGCTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110298.9 |
||
| 3UTR-3UTR TCA 90 bp | ATTGCTAAGACAGCCCAGGACTGGGAGGAACGGGTGACTGGCCTGAAAAATAAAGCAGCACCAGAAGACTaGCCCCACTCAGTCCCCGGA | + |
|
Preference number: 2 (lower is better) Translates to: IAKTAQDWEERVTGLKNKAAPED*PHSVPG Trigger: TCCGGGGACTGAGTGGGGTCAGTCTTCTGGTGCTGC...TTTATTTTTCAGGCCAGTCACCCGTTCCTCCCAGTCCTGGGCTGTCTTAGCAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 |
||
| 3UTR-3UTR TCA 90 bp | AGTCCCCGGATGTATGGCTGCAATTTCCTTGTTAGCAGCATCAGGGACATGGGCCCATCTGGGATGGGGTaGTGCCCACTACAGGCACAT | + |
|
Preference number: 2 (lower is better) Translates to: SPRMYGCNFLVSSIRDMGPSGMG*CPLQAH Trigger: ATGTGCCTGTAGTGGGCATCACCCCATCCCAGATGG...GCCCATGTCCCTGATGCTGCTAACAAGGAAATTGCAGCCATACATCCGGGGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 |
||
| 3UTR-3UTR GCA 90 bp | TGGACTTGCTTTCTAGTGCGGCCCACTGAGCTTCGAAAGGATCCACTGGGCAGGTACGCTGCTTGGACTTaGTTTCTAGTGCGGCCCACT | + |
|
Preference number: 2 (lower is better) Translates to: WTCFLVRPTELRKDPLGRYAAWT*FLVRPT Trigger: AGTGGGCCGCACTAGAAAGCAAGTCCAAGCAGCGTA...CCTGCCCAGTGGATCCTTTCGAAGCTCAGTGGGCCGCACTAGAAAGCAAGTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 |
||
| 3UTR-3UTR CCA 90 bp | AGTCCCCGGATGTATGGCTGCAATTTCCTTGTTAGCAGCATCAGGGACATGGGCAGAGGTGGGAGAGGATaGGGATGGAGCAGTGTTGCC | + |
|
Preference number: 2 (lower is better) Translates to: SPRMYGCNFLVSSIRDMGRGGRG*GWSSVA Trigger: GGCAACACTGCTCCATCCCCATCCTCTCCCACCTCT...GCCCATGTCCCTGATGCTGCTAACAAGGAAATTGCAGCCATACATCCGGGGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110298.9 |
||
| 3UTR-3UTR CCA 90 bp | TTGTCTGAGGGTGGCCTGCAGTGCCAAACACATTGGCTACCATCTGGGATGGGGCCAATGTCACTGGTTTaGTCATTGGGGCGGAGGAGA | + |
|
Preference number: 2 (lower is better) Translates to: LSEGGLQCQTHWLPSGMGPMSLV*SLGRRR Trigger: TCTCCTCCGCCCCAATGACCAAACCAGTGACATTGG...CCCCATCCCAGATGGTAGCCAATGTGTTTGGCACTGCAGGCCACCCTCAGACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110298.9 |
||
| 3UTR CAA 90 bp | GGGTTGGTTTCACGGACAGGCATTGCTACGTGTGCTAGAGCAGTATaGGCTGGCTTAGCAGTAAGCACATGGGAGGCTGAGTCAGTGCCA | + |
|
Preference number: 2 (lower is better) Translates to: GLVSRTGIATCARAV*AGLAVSTWEAESVP Trigger: TGGCACTGACTCAGCCTCCCATGTGCTTACTGCTAAGCCAGCCAATACTGCTCTAGCACACGTAGCAATGCCTGTCCGTGAAACCAACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 |
||
| 3UTR CAA 90 bp | CACTACTTGTCTCATATTGAGGGAATGTCTGCTGCTTGGCCAGGCTaGGCGACTGATGTGGATGAGTTGTCTGAGGGTGGCCTGCAGTGC | + |
|
Preference number: 2 (lower is better) Translates to: HYLSHIEGMSAAWPG*ATDVDELSEGGLQC Trigger: GCACTGCAGGCCACCCTCAGACAACTCATCCACATCAGTCGCCAAGCCTGGCCAAGCAGCAGACATTCCCTCAATATGAGACAAGTAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 |
||
| 3UTR CAA 90 bp | GCCTCACTTCTGTGGACGTCACCCCTTGCTGGACTGTGCTTGGACTaGCTCCTTGGGACCTCTGGGATTAGTGAAAAGTGTGCTGATCTG | + |
|
Preference number: 2 (lower is better) Translates to: ASLLWTSPLAGLCLD*LLGTSGISEKCADL Trigger: CAGATCAGCACACTTTTCACTAATCCCAGAGGTCCCAAGGAGCAAGTCCAAGCACAGTCCAGCAAGGGGTGACGTCCACAGAAGTGAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 ENSMUST00000117217.8 |
||
| 3UTR CAA 90 bp | AGGCTTGCCTCACTTCTGTGGACGTCACCCCTTGCTGGACTGTGCTaGGACTTGCTCCTTGGGACCTCTGGGATTAGTGAAAAGTGTGCT | + |
|
Preference number: 2 (lower is better) Translates to: RLASLLWTSPLAGLC*DLLLGTSGISEKCA Trigger: AGCACACTTTTCACTAATCCCAGAGGTCCCAAGGAGCAAGTCCAAGCACAGTCCAGCAAGGGGTGACGTCCACAGAAGTGAGGCAAGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 ENSMUST00000117217.8 |
||
| 3UTR-3UTR GCA 90 bp | TTGTCTGAGGGTGGCCTGCAGTGCCAAACACATTGGCTACCATCTGGGATGGGGCCCCGGATGTATGGCTaGAATTTCCTTGTTAGCAGC | + |
|
Preference number: 2 (lower is better) Translates to: LSEGGLQCQTHWLPSGMGPRMYG*NFLVSS Trigger: GCTGCTAACAAGGAAATTGCAGCCATACATCCGGGG...CCCCATCCCAGATGGTAGCCAATGTGTTTGGCACTGCAGGCCACCCTCAGACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 |
||
| 3UTR-3UTR CCA 90 bp | TCCTCTTCAGATCTTCTGCCTCTCTGCTGCCAGAGATTTGTTAGGGTCAGAGGGGCAGCATCAGGGACATaGGCCCAGGGGTTGGTTTCA | + |
|
Preference number: 2 (lower is better) Translates to: SSSDLLPLCCQRFVRVRGAASGT*AQGLVS Trigger: TGAAACCAACCCCTGGGCCCATGTCCCTGATGCTGC...CCCTCTGACCCTAACAAATCTCTGGCAGCAGAGAGGCAGAAGATCTGAAGAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 |
||
| 3UTR-3UTR CCA 90 bp | AGCCTGCCTGGCTTCACCCAGCCACACTGTCCCCATCGAGCGATTGCTAAGACAAAGAACAGCCCTTCATaGGCAAAAGCTCTACCACGA | + |
|
Preference number: 2 (lower is better) Translates to: SLPGFTQPHCPHRAIAKTKNSPS*AKALPR Trigger: TCGTGGTAGAGCTTTTGCCCATGAAGGGCTGTTCTT...TGTCTTAGCAATCGCTCGATGGGGACAGTGTGGCTGGGTGAAGCCAGGCAGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110298.9 ENSMUST00000117217.8 |
||
| 3UTR-3UTR CCA 90 bp | TGGACTTGCTTTCTAGTGCGGCCCACTGAGCTTCGAAAGGATCCACTGGGCAGGCGGCGTGGGATAGCATaGGGATTGTTCATCTCTGAA | + |
|
Preference number: 2 (lower is better) Translates to: WTCFLVRPTELRKDPLGRRRGIA*GLFISE Trigger: TTCAGAGATGAACAATCCCCATGCTATCCCACGCCG...CCTGCCCAGTGGATCCTTTCGAAGCTCAGTGGGCCGCACTAGAAAGCAAGTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110298.9 |
||
| 3UTR CAA 90 bp | GCTGCAATTTCCTTGTTAGCAGCATCAGGGACATGGGCCCAGGGGTaGGTTTCACGGACAGGCATTGCTACGTGTGCTAGAGCAGTATTG | + |
|
Preference number: 2 (lower is better) Translates to: AAISLLAASGTWAQG*VSRTGIATCARAVL Trigger: CAATACTGCTCTAGCACACGTAGCAATGCCTGTCCGTGAAACCAACCCCTGGGCCCATGTCCCTGATGCTGCTAACAAGGAAATTGCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 |
||
| 3UTR-3UTR TCA 90 bp | ACACTTCTTCTAACCAGCGGTCAGCTTCAGAGGGAGTGCGTCTGTGACCAGCCTACAGCCATGAAACAATaGCAGATCCATCGCCGAGTG | + |
|
Preference number: 2 (lower is better) Translates to: TLLLTSGQLQRECVCDQPTAMKQ*QIHRRV Trigger: CACTCGGCGATGGATCTGTCATTGTTTCATGGCTGT...AGGCTGGTCACAGACGCACTCCCTCTGAAGCTGACCGCTGGTTAGAAGAAGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110298.9 |
||
| 3UTR-3UTR CCA 90 bp | CCCGCACACTCTTTGACACTTCTTCTAACCAGCGGTCAGCTTCAGAGGGAGTGCTTAGCAGTAAGCACATaGGAGGCTGAGTCAGTGCCA | + |
|
Preference number: 2 (lower is better) Translates to: PAHSLTLLLTSGQLQRECLAVST*EAESVP Trigger: TGGCACTGACTCAGCCTCCCATGTGCTTACTGCTAA...GCACTCCCTCTGAAGCTGACCGCTGGTTAGAAGAAGTGTCAAAGAGTGTGCGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 |
||
| 3UTR-3UTR CCA 90 bp | GGGTGGCCTGCAGTGCCAAACACATTGGCTACCATCTGGGATGGGGTGATGCCCGTCAAAGTTCCTATCTaGGGCACAGAAGGAAACTTT | + |
|
Preference number: 2 (lower is better) Translates to: GWPAVPNTLATIWDGVMPVKVPI*GTEGNF Trigger: AAAGTTTCCTTCTGTGCCCCAGATAGGAACTTTGAC...GGGCATCACCCCATCCCAGATGGTAGCCAATGTGTTTGGCACTGCAGGCCACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110298.9 |
||
| 3UTR CAA 90 bp | AGGAGGCTTAAAGAAGGGACTGGTGGTAGCACTACTTGTCTCATATaGAGGGAATGTCTGCTGCTTGGCCAGGCTTGGCGACTGATGTGG | + |
|
Preference number: 2 (lower is better) Translates to: RRLKEGTGGSTTCLI*RECLLLGQAWRLMW Trigger: CCACATCAGTCGCCAAGCCTGGCCAAGCAGCAGACATTCCCTCAATATGAGACAAGTAGTGCTACCACCAGTCCCTTCTTTAAGCCTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 |
||
| 3UTR CAA 90 bp | TTCTGTGGACGTCACCCCTTGCTGGACTGTGCTTGGACTTGCTCCTaGGGACCTCTGGGATTAGTGAAAAGTGTGCTGATCTGGAAAGCA | + |
|
Preference number: 2 (lower is better) Translates to: FCGRHPLLDCAWTCS*GPLGLVKSVLIWKA Trigger: TGCTTTCCAGATCAGCACACTTTTCACTAATCCCAGAGGTCCCAAGGAGCAAGTCCAAGCACAGTCCAGCAAGGGGTGACGTCCACAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 ENSMUST00000117217.8 |
||
| 3UTR-3UTR GCA 90 bp | GTCACTGGAGAAAGGGTTGGTAGGAGAAGGATTTGTACGCTGCTTGGACTTGCTGAGGGTGGCCTGCAGTaGCAAACACATTGGCTACCA | + |
|
Preference number: 2 (lower is better) Translates to: VTGERVGRRRICTLLGLAEGGLQ*QTHWLP Trigger: TGGTAGCCAATGTGTTTGGCACTGCAGGCCACCCTC...AGCAAGTCCAAGCAGCGTACAAATCCTTCTCCTACCAACCCTTTCTCCAGTGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 |
||
| 3UTR-3UTR GCA 90 bp | TGCAATTTCCTTGTTAGCAGCATCAGGGACATGGGCCCAGGGGTTGGTTTCACGCACAGGAGACTGTGGTaGCACCAATGTCACTGGTTT | + |
|
Preference number: 2 (lower is better) Translates to: CNFLVSSIRDMGPGVGFTHRRLW*HQCHWF Trigger: AAACCAGTGACATTGGTGGCACCACAGTCTCCTGTG...CGTGAAACCAACCCCTGGGCCCATGTCCCTGATGCTGCTAACAAGGAAATTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110298.9 |
||
| 3UTR CAA 90 bp | ATACAGATTCCTCTTCAGATCTTCTGCCTCTCTGCTGCCAGAGATTaGTTAGGGTCAGAGGGGCCAGAAGGCCAGGTTTCCTTGGCTTCT | + |
|
Preference number: 2 (lower is better) Translates to: IQIPLQIFCLSAARD*LGSEGPEGQVSLAS Trigger: AGAAGCCAAGGAAACCTGGCCTTCTGGCCCCTCTGACCCTAACAAATCTCTGGCAGCAGAGAGGCAGAAGATCTGAAGAGGAATCTGTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 ENSMUST00000117217.8 |
||
| 3UTR-3UTR TCA 90 bp | AGCCTGCCTGGCTTCACCCAGCCACACTGTCCCCATCGAGCGATTGCTAAGACATCCCTTTTCTGGATATaGTTATGTCATTGTCACCGT | + |
|
Preference number: 2 (lower is better) Translates to: SLPGFTQPHCPHRAIAKTSLFWI*LCHCHR Trigger: ACGGTGACAATGACATAATCATATCCAGAAAAGGGA...TGTCTTAGCAATCGCTCGATGGGGACAGTGTGGCTGGGTGAAGCCAGGCAGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 ENSMUST00000117217.8 |
||
| 3UTR-3UTR GCA 90 bp | ATTGCTAAGACAGCCCAGGACTGGGAGGAACGGGTGACTGGCCTGAAAAATAAATTGCCCTCCACCCCCTaGTCTTGCCTAAGTACAGAA | + |
|
Preference number: 2 (lower is better) Translates to: IAKTAQDWEERVTGLKNKLPSTP*SCLSTE Trigger: TTCTGTACTTAGGCAAGAGCAGGGGGTGGAGGGCAA...TTTATTTTTCAGGCCAGTCACCCGTTCCTCCCAGTCCTGGGCTGTCTTAGCAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 ENSMUST00000117217.8 |
||
| 3UTR-3UTR GCA 90 bp | TGGACTTGCTTTCTAGTGCGGCCCACTGAGCTTCGAAAGGATCCACTGGGCAGGGCTTTCTTGGCATCTTaGAACTGTTTCATGATCTCC | + |
|
Preference number: 2 (lower is better) Translates to: WTCFLVRPTELRKDPLGRAFLAS*NCFMIS Trigger: GGAGATCATGAAACAGTTGCAAGATGCCAAGAAAGC...CCTGCCCAGTGGATCCTTTCGAAGCTCAGTGGGCCGCACTAGAAAGCAAGTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110298.9 |
||
| 3UTR-3UTR CCA 90 bp | GAGCAGGAAATCCCCGGAAAGAGCCTTGACGAGCAAGCTGTTCAATTGGTGCATTTAGCAGTAAGCACATaGGAGGCTGAGTCAGTGCCA | + |
|
Preference number: 2 (lower is better) Translates to: EQEIPGKSLDEQAVQLVHLAVST*EAESVP Trigger: TGGCACTGACTCAGCCTCCCATGTGCTTACTGCTAA...ATGCACCAATTGAACAGCTTGCTCGTCAAGGCTCTTTCCGGGGATTTCCTGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110298.9 |
||
| 3UTR-3UTR CCA 90 bp | GACTGGGAGGAACGGGTGACTGGCCTGAAAAATAAAGGGAGATTGTTTTGCTTCAGCCTGGAAGAGACCTaGAGAGGCAGCACCAGAAGA | + |
|
Preference number: 2 (lower is better) Translates to: DWEERVTGLKNKGRLFCFSLEET*RGSTRR Trigger: TCTTCTGGTGCTGCCTCTCCAGGTCTCTTCCAGGCT...GAAGCAAAACAATCTCCCTTTATTTTTCAGGCCAGTCACCCGTTCCTCCCAGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 |
||
| 3UTR-3UTR CCA 90 bp | GTCACTGGAGAAAGGGTTGGTAGGAGAAGGATTTGTACGCTGCTTGGACTTGCTGCTTGGCGACTGATGTaGATGAGTTGTCTGAGGGTG | + |
|
Preference number: 2 (lower is better) Translates to: VTGERVGRRRICTLLGLAAWRLM*MSCLRV Trigger: CACCCTCAGACAACTCATCCACATCAGTCGCCAAGC...AGCAAGTCCAAGCAGCGTACAAATCCTTCTCCTACCAACCCTTTCTCCAGTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 |
||
| 3UTR-3UTR TCA 90 bp | GCTTTGAATACAGATTCCTCTTCAGATCTTCTGCCTCTCTGCTGCCAGAGATTTCCATCTGGGATGGGGTaGTGCCCACTACAGGCACAT | + |
|
Preference number: 2 (lower is better) Translates to: ALNTDSSSDLLPLCCQRFPSGMG*CPLQAH Trigger: ATGTGCCTGTAGTGGGCATCACCCCATCCCAGATGG...AAATCTCTGGCAGCAGAGAGGCAGAAGATCTGAAGAGGAATCTGTATTCAAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 |
||
| 3UTR-3UTR CCA 90 bp | GCTTTGAATACAGATTCCTCTTCAGATCTTCTGCCTCTCTGCTGCCAGAGATTTGCAGCATCAGGGACATaGGCCCAGGGGTTGGTTTCA | + |
|
Preference number: 2 (lower is better) Translates to: ALNTDSSSDLLPLCCQRFAASGT*AQGLVS Trigger: TGAAACCAACCCCTGGGCCCATGTCCCTGATGCTGC...AAATCTCTGGCAGCAGAGAGGCAGAAGATCTGAAGAGGAATCTGTATTCAAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 |
||
| 3UTR-3UTR CCA 90 bp | GGCTTAGCAGTAAGCACATGGGAGGCTGAGTCAGTGCCATTAGCTTGTAACACAATGCGTAGGGACAGCTaGCGTTTAAAGGGTGACATC | + |
|
Preference number: 2 (lower is better) Translates to: GLAVSTWEAESVPLACNTMRRDS*RLKGDI Trigger: GATGTCACCCTTTAAACGCCAGCTGTCCCTACGCAT...TGTGTTACAAGCTAATGGCACTGACTCAGCCTCCCATGTGCTTACTGCTAAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110298.9 |
||
| 3UTR CAA 90 bp | GGAGCCACTGATGGACCAACAACTGTCTTGTCTGTCTCAGCTTTCTaGGCATCTTGCAACTGTTTCATGATCTCCTCTCTTTCGGCTTGC | + |
|
Preference number: 2 (lower is better) Translates to: GATDGPTTVLSVSAF*ASCNCFMISSLSAC Trigger: GCAAGCCGAAAGAGAGGAGATCATGAAACAGTTGCAAGATGCCAAGAAAGCTGAGACAGACAAGACAGTTGTTGGTCCATCAGTGGCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110298.9 |
||
| 3UTR-3UTR TCA 90 bp | GGGAAATCGGTCTTCCTCTGCATAGTGGAAGGCAACTCATTGATGCGTAGGGACCTTGCAACTGTTTCATaGTCTCCTCTCTTTCGGCTT | + |
|
Preference number: 2 (lower is better) Translates to: GKSVFLCIVEGNSLMRRDLATVS*SPLFRL Trigger: AAGCCGAAAGAGAGGAGATCATGAAACAGTTGCAAG...GTCCCTACGCATCAATGAGTTGCCTTCCACTATGCAGAGGAAGACCGATTTCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110298.9 |
||
| 3UTR-3UTR GCA 90 bp | AGACACACACAGCACAGAAGCCAGAATCTCATCCCTGTAAAACTTATGGGAACATGTCTGAGGGTGGCCTaGAGTGCCAAACACATTGGC | + |
|
Preference number: 2 (lower is better) Translates to: RHTQHRSQNLIPVKLMGTCLRVA*SAKHIG Trigger: GCCAATGTGTTTGGCACTGCAGGCCACCCTCAGACA...TGTTCCCATAAGTTTTACAGGGATGAGATTCTGGCTTCTGTGCTGTGTGTGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 |
||
| 3UTR-3UTR CCA 90 bp | CCAGAATCTCATCCCTGTAAAACTTATGGGAACAAAACTTCAAGGACAGAGCCCCTTGCCTCACTTCTGTaGACGTCACCCCTTGCTGGA | + |
|
Preference number: 2 (lower is better) Translates to: PESHPCKTYGNKTSRTEPLASLL*TSPLAG Trigger: TCCAGCAAGGGGTGACGTCCACAGAAGTGAGGCAAG...GGGCTCTGTCCTTGAAGTTTTGTTCCCATAAGTTTTACAGGGATGAGATTCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 ENSMUST00000117217.8 |
||
| 3UTR CAA 90 bp | TTTATTGGGAAATCGGTCTTCCTCTGCATAGTGGAAGGCAACTCATaGATGCGTAGGGACAGCTGGCGTTTAAAGGGTGACATCTTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: FIGKSVFLCIVEGNS*MRRDSWRLKGDIFW Trigger: CCAGAAGATGTCACCCTTTAAACGCCAGCTGTCCCTACGCATCAATGAGTTGCCTTCCACTATGCAGAGGAAGACCGATTTCCCAATAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110298.9 |
||
| 3UTR-3UTR TCA 90 bp | GGTAGCACTACTTGTCTCATATTGAGGGAATGTCTGCTGCTTGGCCAGGCTTGGATGATCCTTCTCTTGTaGAAGTGGTTCTACTGGCAT | + |
|
Preference number: 2 (lower is better) Translates to: GSTTCLILRECLLLGQAWMILLL*KWFYWH Trigger: ATGCCAGTAGAACCACTTTCACAAGAGAAGGATCAT...CCAAGCCTGGCCAAGCAGCAGACATTCCCTCAATATGAGACAAGTAGTGCTACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110298.9 |
||
| 3UTR-3UTR TCA 90 bp | TTGGCTGGCTTAGCAGTAAGCACATGGGAGGCTGAGTCAGTGCCATTAGCTTGTAGTTGTGACACGGAATaGTCCTTCTCTTGTGAAAGT | + |
|
Preference number: 2 (lower is better) Translates to: LAGLAVSTWEAESVPLACSCDTE*SFSCES Trigger: ACTTTCACAAGAGAAGGATCATTCCGTGTCACAACT...ACAAGCTAATGGCACTGACTCAGCCTCCCATGTGCTTACTGCTAAGCCAGCCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110298.9 |
||
| 3UTR-3UTR GCA 90 bp | CAGAAGCCAGAATCTCATCCCTGTAAAACTTATGGGAACAAAACTTCAAGGACATCCCCTTTGCTCCTTTaGCCTCCACCCCCTGCTCTT | + |
|
Preference number: 2 (lower is better) Translates to: QKPESHPCKTYGNKTSRTSPLLL*PPPPAL Trigger: AAGAGCAGGGGGTGGAGGGCAAAGGAGCAAAGGGGA...TGTCCTTGAAGTTTTGTTCCCATAAGTTTTACAGGGATGAGATTCTGGCTTCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 ENSMUST00000117217.8 |
||
| 3UTR-3UTR CCA 90 bp | AGACACACACAGCACAGAAGCCAGAATCTCATCCCTGTAAAACTTATGGGAACAACATTGGCTACCATCTaGGATGGGGTGATGCCCACT | + |
|
Preference number: 2 (lower is better) Translates to: RHTQHRSQNLIPVKLMGTTLATI*DGVMPT Trigger: AGTGGGCATCACCCCATCCCAGATGGTAGCCAATGT...TGTTCCCATAAGTTTTACAGGGATGAGATTCTGGCTTCTGTGCTGTGTGTGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 |
||
| 3UTR-3UTR TCA 90 bp | CCAGAATCTCATCCCTGTAAAACTTATGGGAACAAAACTTCAAGGACAGAGCCCCTGGCGTTTAAAGGGTaGCATCTTCTGGCTAAGAGC | + |
|
Preference number: 2 (lower is better) Translates to: PESHPCKTYGNKTSRTEPLAFKG*HLLAKS Trigger: GCTCTTAGCCAGAAGATGTCACCCTTTAAACGCCAG...GGGCTCTGTCCTTGAAGTTTTGTTCCCATAAGTTTTACAGGGATGAGATTCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000110298.9 |
||
| 3UTR-3UTR GCA 90 bp | CCAGAATCTCATCCCTGTAAAACTTATGGGAACAAAACTTCAAGGACAGAGCCCCCCCGGATGTATGGCTaGAATTTCCTTGTTAGCAGC | + |
|
Preference number: 2 (lower is better) Translates to: PESHPCKTYGNKTSRTEPPRMYG*NFLVSS Trigger: GCTGCTAACAAGGAAATTGCAGCCATACATCCGGGG...GGGCTCTGTCCTTGAAGTTTTGTTCCCATAAGTTTTACAGGGATGAGATTCTGG 47% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 |
||
| 3UTR-3UTR GCA 90 bp | CCAGAATCTCATCCCTGTAAAACTTATGGGAACAAAACTTCAAGGACAGAGCCCTCCACCCCCTGCTCTTaGCTAAGTACAGAAAACACC | + |
|
Preference number: 2 (lower is better) Translates to: PESHPCKTYGNKTSRTEPSTPCS*LSTENT Trigger: GGTGTTTTCTGTACTTAGGCAAGAGCAGGGGGTGGA...GGGCTCTGTCCTTGAAGTTTTGTTCCCATAAGTTTTACAGGGATGAGATTCTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 ENSMUST00000117217.8 |
||
| 3UTR-3UTR GCA 90 bp | ATGTACAATTTCTTACATCTAACCCGCTCACTTTTGGCAAGATTACTTACAACTCCCAGCAGCATAGCCTaGCTGGCTTCACCCAGCCAC | + |
|
Preference number: 2 (lower is better) Translates to: MYNFLHLTRSLLARLLTTPSSIA*LASPSH Trigger: GTGGCTGGGTGAAGCCAGGCAGGCTATGCTGCTGGG...AGTTGTAAGTAATCTTGCCAAAAGTGAGCGGGTTAGATGTAAGAAATTGTACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 ENSMUST00000117217.8 |
||
| 3UTR-3UTR TCA 90 bp | TATTCTGTAACTCAAAATGGAAGCTCAGCTTTATCCCCAGACTACAGCTCTACTGGGATTGTTCATCTCTaGAGATGCAGTGCCATCCGG | + |
|
Preference number: 2 (lower is better) Translates to: YSVTQNGSSALSPDYSSTGIVHL*RCSAIR Trigger: CCGGATGGCACTGCATCTTCAGAGATGAACAATCCC...AGTAGAGCTGTAGTCTGGGGATAAAGCTGAGCTTCCATTTTGAGTTACAGAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110298.9 |
||
| 3UTR-3UTR GCA 90 bp | TATTCCAGTAAATGTGCTTTGAATACAGATTCCTCTTCAGATCTTCTGCCTCTCTGTTCAATTGGTGCATaGCGGCGTGGGATAGCATGG | + |
|
Preference number: 2 (lower is better) Translates to: YSSKCALNTDSSSDLLPLCSIGA*RRGIAW Trigger: CCATGCTATCCCACGCCGGCATGCACCAATTGAACA...GAGAGGCAGAAGATCTGAAGAGGAATCTGTATTCAAAGCACATTTACTGGAATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110298.9 |
||
| 3UTR-3UTR CCA 90 bp | TATTCCAGTAAATGTGCTTTGAATACAGATTCCTCTTCAGATCTTCTGCCTCTCCAGTGCCAAACACATTaGCTACCATCTGGGATGGGG | + |
|
Preference number: 2 (lower is better) Translates to: YSSKCALNTDSSSDLLPLQCQTH*LPSGMG Trigger: CCCCATCCCAGATGGTAGCCAATGTGTTTGGCACTG...GAGAGGCAGAAGATCTGAAGAGGAATCTGTATTCAAAGCACATTTACTGGAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 |
||
| 3UTR-3UTR GCA 90 bp | ATGACATTAGAATTTCACCATAGGTTTAAAACCAGGACAACACTGCTTGCTCATTACGCTGCTTGGACTTaGTTTCTAGTGCGGCCCACT | + |
|
Preference number: 2 (lower is better) Translates to: MTLEFHHRFKTRTTLLAHYAAWT*FLVRPT Trigger: AGTGGGCCGCACTAGAAAGCAAGTCCAAGCAGCGTA...ATGAGCAAGCAGTGTTGTCCTGGTTTTAAACCTATGGTGAAATTCTAATGTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 |
||
| 3UTR-3UTR CCA 90 bp | CCCTGTAAAACTTATGGGAACAAAACTTCAAGGACAGAGCCCATTAAGACCCACCTGTCTCAGCTTTCTTaGCATCTTGCAACTGTTTCA | + |
|
Preference number: 2 (lower is better) Translates to: PCKTYGNKTSRTEPIKTHLSQLS*HLATVS Trigger: TGAAACAGTTGCAAGATGCCAAGAAAGCTGAGACAG...GTGGGTCTTAATGGGCTCTGTCCTTGAAGTTTTGTTCCCATAAGTTTTACAGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110298.9 |
||
| 3UTR-3UTR GCA 90 bp | GACTGGGAGGAACGGGTGACTGGCCTGAAAAATAAAGGGAGATTGTTTTGCTTCAAACCAGGACAACACTaGTTGCTCATCTTATTAAAA | + |
|
Preference number: 2 (lower is better) Translates to: DWEERVTGLKNKGRLFCFKPGQH*LLILLK Trigger: TTTTAATAAGATGAGCAAGCAGTGTTGTCCTGGTTT...GAAGCAAAACAATCTCCCTTTATTTTTCAGGCCAGTCACCCGTTCCTCCCAGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 ENSMUST00000117217.8 |
||
| 3UTR-3UTR CCA 90 bp | ATGTACAATTTCTTACATCTAACCCGCTCACTTTTGGCAAGATTACTTACAACTTTGCTGGACTGTGCTTaGACTTGCTCCTTGGGACCT | + |
|
Preference number: 2 (lower is better) Translates to: MYNFLHLTRSLLARLLTTLLDCA*TCSLGP Trigger: AGGTCCCAAGGAGCAAGTCCAAGCACAGTCCAGCAA...AGTTGTAAGTAATCTTGCCAAAAGTGAGCGGGTTAGATGTAAGAAATTGTACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 ENSMUST00000117217.8 |
||
| 3UTR-3UTR CCA 90 bp | ATGTACAATTTCTTACATCTAACCCGCTCACTTTTGGCAAGATTACTTACAACTAAGAACAGCCCTTCATaGGCAAAAGCTCTACCACGA | + |
|
Preference number: 2 (lower is better) Translates to: MYNFLHLTRSLLARLLTTKNSPS*AKALPR Trigger: TCGTGGTAGAGCTTTTGCCCATGAAGGGCTGTTCTT...AGTTGTAAGTAATCTTGCCAAAAGTGAGCGGGTTAGATGTAAGAAATTGTACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110298.9 ENSMUST00000117217.8 |
||
| 3UTR CAA 90 bp | GATTGTTTTGCTTCCTGTTATGTTTTATATTCCAGTAAATGTGCTTaGAATACAGATTCCTCTTCAGATCTTCTGCCTCTCTGCTGCCAG | + |
|
Preference number: 2 (lower is better) Translates to: DCFASCYVLYSSKCA*NTDSSSDLLPLCCQ Trigger: CTGGCAGCAGAGAGGCAGAAGATCTGAAGAGGAATCTGTATTCAAAGCACATTTACTGGAATATAAAACATAACAGGAAGCAAAACAATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 ENSMUST00000117217.8 |
||
| 3UTR GCA 72 bp | GCTGCTGTGCCCTCCCGTGAACCCAGCAGCATAGCCTaGCTGGCTTCACCCAGCCACACTGTCCCCATCGAG | + |
|
Preference number: 3 (lower is better) Translates to: AAVPSREPSSIA*LASPSHTVPIE Trigger: CTCGATGGGGACAGTGTGGCTGGGTGAAGCCAGGCAGGCTATGCTGCTGGGTTCACGGGAGGGCACAGCAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 ENSMUST00000117217.8 |
||
| 3UTR CCA 72 bp | GGGCAGTCCTCCCCAGGGAGGCTTGCCTCACTTCTGTaGACGTCACCCCTTGCTGGACTGTGCTTGGACTTG | + |
|
Preference number: 3 (lower is better) Translates to: GQSSPGRLASLL*TSPLAGLCLDL Trigger: CAAGTCCAAGCACAGTCCAGCAAGGGGTGACGTCCACAGAAGTGAGGCAAGCCTCCCTGGGGAGGACTGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 ENSMUST00000117217.8 |
||
| 3UTR-3UTR CAA 90 bp | GTGCGGCCCACTGAGCTTCGAAAGGATCCACTGGGCAGGTGCCTGGAGGGACTTCTTGCTGGACTGTGCTaGGACTTGCTCCTTGGGACC | + |
|
Preference number: 3 (lower is better) Translates to: VRPTELRKDPLGRCLEGLLAGLC*DLLLGT Trigger: GGTCCCAAGGAGCAAGTCCAAGCACAGTCCAGCAAG...AAGTCCCTCCAGGCACCTGCCCAGTGGATCCTTTCGAAGCTCAGTGGGCCGCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 |
||
| 3UTR GCA 72 bp | CGGCCCACTGAGCTTCGAAAGGATCCACTGGGCAGGTaGCTGGAGGGACTTCTGCATGCCTGTTTCCTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: RPTELRKDPLGR*LEGLLHACFLR Trigger: CCTCAGGAAACAGGCATGCAGAAGTCCCTCCAGGCACCTGCCCAGTGGATCCTTTCGAAGCTCAGTGGGCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 |
||
| 3UTR CCA 72 bp | GGGTCCTCAGAGGGCGTGCTGAAGGCACTGGTGATCTaGGAACACAAGGAGCTGATGCTCTCGGCCTCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: GSSEGVLKALVI*EHKELMLSASP Trigger: AGGAGAGGCCGAGAGCATCAGCTCCTTGTGTTCCCAGATCACCAGTGCCTTCAGCACGCCCTCTGAGGACCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110298.9 |
||
| 3UTR-3UTR CAA 90 bp | CAGCATAGCCTGCCTGGCTTCACCCAGCCACACTGTCCCCATCGAGCGATTGCTCAAACAAAGTCCCCTTaGCTCCTTTGCCCTCCACCC | + |
|
Preference number: 3 (lower is better) Translates to: QHSLPGFTQPHCPHRAIAQTKSP*LLCPPP Trigger: GGGTGGAGGGCAAAGGAGCAAAGGGGACTTTGTTTG...AGCAATCGCTCGATGGGGACAGTGTGGCTGGGTGAAGCCAGGCAGGCTATGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 ENSMUST00000117217.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCCTGCCTGGCTTCACCCAGCCACACTGTCCCCATCGAGCGATTGCTAAGACAGTGGAAGGCAACTCATaGATGCGTAGGGACAGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: SLPGFTQPHCPHRAIAKTVEGNS*MRRDSW Trigger: CCAGCTGTCCCTACGCATCAATGAGTTGCCTTCCAC...TGTCTTAGCAATCGCTCGATGGGGACAGTGTGGCTGGGTGAAGCCAGGCAGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110298.9 |
||
| 3UTR TCA 72 bp | GTACGCTGCTTGGACTTGCTTTCTAGTGCGGCCCACTaGGCTTCGAAAGGATCCACTGGGCAGGTGCCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: VRCLDLLSSAAH*ASKGSTGQVPG Trigger: TCCAGGCACCTGCCCAGTGGATCCTTTCGAAGCTCAGTGGGCCGCACTAGAAAGCAAGTCCAAGCAGCGTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 |
||
| 3UTR GCA 72 bp | GGATCCACTGGGCAGGTGCCTGGAGGGACTTCTGCATaGCTGTTTCCTGAGGCTAGCCCACCATTGTCTACA | + |
|
Preference number: 3 (lower is better) Translates to: GSTGQVPGGTSA*LFPEASPPLST Trigger: TGTAGACAATGGTGGGCTAGCCTCAGGAAACAGGCATGCAGAAGTCCCTCCAGGCACCTGCCCAGTGGATCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 |
||
| 3UTR CCA 72 bp | ACACAGGAGACTGTGGTGCCACCAATGTCACTGGTTTaGTCATTGGGGCGGAGGAGAAGGGGTCCTCAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: TQETVVPPMSLV*SLGRRRRGPQR Trigger: CCTCTGAGGACCCCTTCTCCTCCGCCCCAATGACCAAACCAGTGACATTGGTGGCACCACAGTCTCCTGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110298.9 |
||
| 3UTR-3UTR CAA 90 bp | AGCCTGCCTGGCTTCACCCAGCCACACTGTCCCCATCGAGCGATTGCTAAGACATTTCACGGACAGGCATaGCTACGTGTGCTAGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: SLPGFTQPHCPHRAIAKTFHGQA*LRVLEQ Trigger: CTGCTCTAGCACACGTAGCAATGCCTGTCCGTGAAA...TGTCTTAGCAATCGCTCGATGGGGACAGTGTGGCTGGGTGAAGCCAGGCAGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 |
||
| 3UTR-3UTR CAA 90 bp | ACTTCTGTGGACGTCACCCCTTGCTGGACTGTGCTTGGACTTGCTCCTTGGGACGCAGTGCCAAACACATaGGCTACCATCTGGGATGGG | + |
|
Preference number: 3 (lower is better) Translates to: TSVDVTPCWTVLGLAPWDAVPNT*ATIWDG Trigger: CCCATCCCAGATGGTAGCCAATGTGTTTGGCACTGC...GTCCCAAGGAGCAAGTCCAAGCACAGTCCAGCAAGGGGTGACGTCCACAGAAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 |
||
| 3UTR-3UTR CAA 90 bp | ATTAGAGGCTGGGTAGGGCATCCCGTTGGCCACAGGGTAGGACTGGGTAGGGACATGGCTGCAATTTCCTaGTTAGCAGCATCAGGGACA | + |
|
Preference number: 3 (lower is better) Translates to: IRGWVGHPVGHRVGLGRDMAAIS*LAASGT Trigger: TGTCCCTGATGCTGCTAACAAGGAAATTGCAGCCAT...GTCCCTACCCAGTCCTACCCTGTGGCCAACGGGATGCCCTACCCAGCCTCTAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 |
||
| 3UTR GCA 72 bp | TGGCGACTGATGTGGATGAGTTGTCTGAGGGTGGCCTaGAGTGCCAAACACATTGGCTACCATCTGGGATGG | + |
|
Preference number: 3 (lower is better) Translates to: WRLMWMSCLRVA*SAKHIGYHLGW Trigger: CCATCCCAGATGGTAGCCAATGTGTTTGGCACTGCAGGCCACCCTCAGACAACTCATCCACATCAGTCGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 |
||
| 3UTR CCA 72 bp | CTCATATTGAGGGAATGTCTGCTGCTTGGCCAGGCTTaGCGACTGATGTGGATGAGTTGTCTGAGGGTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: LILRECLLLGQA*RLMWMSCLRVA Trigger: GGCCACCCTCAGACAACTCATCCACATCAGTCGCCAAGCCTGGCCAAGCAGCAGACATTCCCTCAATATGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 |
||
| 3UTR CCA 72 bp | TGTCCCCATCGAGCGATTGCTAAGACAGCCCAGGACTaGGAGGAACGGGTGACTGGCCTGAAAAATAAAGGG | + |
|
Preference number: 3 (lower is better) Translates to: CPHRAIAKTAQD*EERVTGLKNKG Trigger: CCCTTTATTTTTCAGGCCAGTCACCCGTTCCTCCCAGTCCTGGGCTGTCTTAGCAATCGCTCGATGGGGACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 ENSMUST00000117217.8 |
||
| 3UTR CCA 72 bp | TCCCCGGAAAGAGCCTTGACGAGCAAGCTGTTCAATTaGTGCATGCCGGCGTGGGATAGCATGGGGATTGTT | + |
|
Preference number: 3 (lower is better) Translates to: SPERALTSKLFN*CMPAWDSMGIV Trigger: AACAATCCCCATGCTATCCCACGCCGGCATGCACCAATTGAACAGCTTGCTCGTCAAGGCTCTTTCCGGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110298.9 |
||
| 3UTR-3UTR CAA 90 bp | GGAGCAGTGTTGCCAGGAGCCACTGATGGACCAACAACTGTCTTGTCTGTCTCAGGGCCCGCACACTCTTaGACACTTCTTCTAACCAGC | + |
|
Preference number: 3 (lower is better) Translates to: GAVLPGATDGPTTVLSVSGPAHS*TLLLTS Trigger: GCTGGTTAGAAGAAGTGTCAAAGAGTGTGCGGGCCC...TGAGACAGACAAGACAGTTGTTGGTCCATCAGTGGCTCCTGGCAACACTGCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110298.9 |
||
| 3UTR-3UTR CAA 90 bp | TGCAATTTCCTTGTTAGCAGCATCAGGGACATGGGCCCAGGGGTTGGTTTCACGACTGATGTGGATGAGTaGTCTGAGGGTGGCCTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: CNFLVSSIRDMGPGVGFTTDVDE*SEGGLQ Trigger: CTGCAGGCCACCCTCAGACAACTCATCCACATCAGT...CGTGAAACCAACCCCTGGGCCCATGTCCCTGATGCTGCTAACAAGGAAATTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 |
||
| 3UTR-3UTR CAA 90 bp | TTGTCTGAGGGTGGCCTGCAGTGCCAAACACATTGGCTACCATCTGGGATGGGGGAGGCTAGCCCACCATaGTCTACACCATTGAAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: LSEGGLQCQTHWLPSGMGEASPP*STPLKA Trigger: AGCTTTCAATGGTGTAGACAATGGTGGGCTAGCCTC...CCCCATCCCAGATGGTAGCCAATGTGTTTGGCACTGCAGGCCACCCTCAGACAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 |
||
| 3UTR TCA 72 bp | TTCTGGCTAAGAGCAGGAAATCCCCGGAAAGAGCCTTaGCGAGCAAGCTGTTCAATTGGTGCATGCCGGCGT | + |
|
Preference number: 3 (lower is better) Translates to: FWLRAGNPRKEP*RASCSIGACRR Trigger: ACGCCGGCATGCACCAATTGAACAGCTTGCTCGTCAAGGCTCTTTCCGGGGATTTCCTGCTCTTAGCCAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110298.9 |
||
| 3UTR GCA 72 bp | GTTACCCATGGTCAAGTAGCTGCAACTGGCATGGGATaGTCTGTTCATGGTTGGGGCAGAAGGGGACACAGA | + |
|
Preference number: 3 (lower is better) Translates to: VTHGQVAATGMG*SVHGWGRRGHR Trigger: TCTGTGTCCCCTTCTGCCCCAACCATGAACAGAGCATCCCATGCCAGTTGCAGCTACTTGACCATGGGTAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 ENSMUST00000117217.8 |
||
| 3UTR GCA 72 bp | CCGGAAAGAGCCTTGACGAGCAAGCTGTTCAATTGGTaGATGCCGGCGTGGGATAGCATGGGGATTGTTCAT | + |
|
Preference number: 3 (lower is better) Translates to: PERALTSKLFNW*MPAWDSMGIVH Trigger: ATGAACAATCCCCATGCTATCCCACGCCGGCATGCACCAATTGAACAGCTTGCTCGTCAAGGCTCTTTCCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110298.9 |
||
| 3UTR CCA 72 bp | ATGGCTGCAATTTCCTTGTTAGCAGCATCAGGGACATaGGCCCAGGGGTTGGTTTCACGGACAGGCATTGCT | + |
|
Preference number: 3 (lower is better) Translates to: MAAISLLAASGT*AQGLVSRTGIA Trigger: AGCAATGCCTGTCCGTGAAACCAACCCCTGGGCCCATGTCCCTGATGCTGCTAACAAGGAAATTGCAGCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 |
||
| 3UTR CCA 72 bp | CACTTCTGTGGACGTCACCCCTTGCTGGACTGTGCTTaGACTTGCTCCTTGGGACCTCTGGGATTAGTGAAA | + |
|
Preference number: 3 (lower is better) Translates to: HFCGRHPLLDCA*TCSLGPLGLVK Trigger: TTTCACTAATCCCAGAGGTCCCAAGGAGCAAGTCCAAGCACAGTCCAGCAAGGGGTGACGTCCACAGAAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 ENSMUST00000117217.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGCATAGCCTGCCTGGCTTCACCCAGCCACACTGTCCCCATCGAGCGATTGCTACTACTTGTCTCATATaGAGGGAATGTCTGCTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: QHSLPGFTQPHCPHRAIATTCLI*RECLLL Trigger: AAGCAGCAGACATTCCCTCAATATGAGACAAGTAGT...AGCAATCGCTCGATGGGGACAGTGTGGCTGGGTGAAGCCAGGCAGGCTATGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 |
||
| 3UTR-3UTR CAA 90 bp | GACTGGGAGGAACGGGTGACTGGCCTGAAAAATAAAGGGAGATTGTTTTGCTTCGGACTGTGCTTGGACTaGCTCCTTGGGACCTCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: DWEERVTGLKNKGRLFCFGLCLD*LLGTSG Trigger: CCCAGAGGTCCCAAGGAGCAAGTCCAAGCACAGTCC...GAAGCAAAACAATCTCCCTTTATTTTTCAGGCCAGTCACCCGTTCCTCCCAGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 ENSMUST00000117217.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCAATTTCCTTGTTAGCAGCATCAGGGACATGGGCCCAGGGGTTGGTTTCACGTCCCCGGAAAGAGCCTaGACGAGCAAGCTGTTCAAT | + |
|
Preference number: 3 (lower is better) Translates to: CNFLVSSIRDMGPGVGFTSPERA*TSKLFN Trigger: ATTGAACAGCTTGCTCGTCAAGGCTCTTTCCGGGGA...CGTGAAACCAACCCCTGGGCCCATGTCCCTGATGCTGCTAACAAGGAAATTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110298.9 |
||
| 3UTR CCA 72 bp | AGCTGTTCAATTGGTGCATGCCGGCGTGGGATAGCATaGGGATTGTTCATCTCTGAAGATGCAGTGCCATCC | + |
|
Preference number: 3 (lower is better) Translates to: SCSIGACRRGIA*GLFISEDAVPS Trigger: GGATGGCACTGCATCTTCAGAGATGAACAATCCCCATGCTATCCCACGCCGGCATGCACCAATTGAACAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110298.9 |
||
| 3UTR-3UTR CAA 90 bp | TTGTCTGAGGGTGGCCTGCAGTGCCAAACACATTGGCTACCATCTGGGATGGGGTCACTGGAGAAAGGGTaGGTAGGAGAAGGATTTGTA | + |
|
Preference number: 3 (lower is better) Translates to: LSEGGLQCQTHWLPSGMGSLEKG*VGEGFV Trigger: TACAAATCCTTCTCCTACCAACCCTTTCTCCAGTGA...CCCCATCCCAGATGGTAGCCAATGTGTTTGGCACTGCAGGCCACCCTCAGACAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 |
||
| 3UTR-3UTR CAA 90 bp | AGACACACACAGCACAGAAGCCAGAATCTCATCCCTGTAAAACTTATGGGAACAGTCCCCTTTGCTCCTTaGCCCTCCACCCCCTGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: RHTQHRSQNLIPVKLMGTVPFAP*PSTPCS Trigger: AGAGCAGGGGGTGGAGGGCAAAGGAGCAAAGGGGAC...TGTTCCCATAAGTTTTACAGGGATGAGATTCTGGCTTCTGTGCTGTGTGTGTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 ENSMUST00000117217.8 |
||
| 3UTR-3UTR CAA 90 bp | GACTGGGAGGAACGGGTGACTGGCCTGAAAAATAAAGGGAGATTGTTTTGCTTCCTTGCTGGACTGTGCTaGGACTTGCTCCTTGGGACC | + |
|
Preference number: 3 (lower is better) Translates to: DWEERVTGLKNKGRLFCFLAGLC*DLLLGT Trigger: GGTCCCAAGGAGCAAGTCCAAGCACAGTCCAGCAAG...GAAGCAAAACAATCTCCCTTTATTTTTCAGGCCAGTCACCCGTTCCTCCCAGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 ENSMUST00000117217.8 |
||
| 3UTR-3UTR CAA 90 bp | CCAGAATCTCATCCCTGTAAAACTTATGGGAACAAAACTTCAAGGACAGAGCCCGGACTGTGCTTGGACTaGCTCCTTGGGACCTCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: PESHPCKTYGNKTSRTEPGLCLD*LLGTSG Trigger: CCCAGAGGTCCCAAGGAGCAAGTCCAAGCACAGTCC...GGGCTCTGTCCTTGAAGTTTTGTTCCCATAAGTTTTACAGGGATGAGATTCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 ENSMUST00000117217.8 |
||
| 3UTR TCA 72 bp | AGTCTTTCCCCCGTGTCTTTGACAGCCATGAAACAATaGCAGATCCATCGCCGAGTGGTGCCATCACGACAT | + |
|
Preference number: 3 (lower is better) Translates to: SLSPVSLTAMKQ*QIHRRVVPSRH Trigger: ATGTCGTGATGGCACCACTCGGCGATGGATCTGTCATTGTTTCATGGCTGTCAAAGACACGGGGGAAAGACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110298.9 |
||
| 3UTR-3UTR CAA 90 bp | TCAAGTAGCTGCAACTGGCATGGGATGCTCTGTTCATGGTTGGGGCAGAAGGGGACTACTTGTCTCATATaGAGGGAATGTCTGCTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: SSSCNWHGMLCSWLGQKGTTCLI*RECLLL Trigger: AAGCAGCAGACATTCCCTCAATATGAGACAAGTAGT...CCCCTTCTGCCCCAACCATGAACAGAGCATCCCATGCCAGTTGCAGCTACTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 |
||
| 3UTR TCA 72 bp | TCTACACCATTGAAAGCTGCAGAACCATTGAGGTGCTaGGCAGGAGGCTTAAAGAAGGGACTGGTGGTAGCA | + |
|
Preference number: 3 (lower is better) Translates to: STPLKAAEPLRC*AGGLKKGLVVA Trigger: TGCTACCACCAGTCCCTTCTTTAAGCCTCCTGCTCAGCACCTCAATGGTTCTGCAGCTTTCAATGGTGTAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 |
||
| 3UTR GCA 72 bp | AATACAGATTCCTCTTCAGATCTTCTGCCTCTCTGCTaGCAGAGATTTGTTAGGGTCAGAGGGGCCAGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: NTDSSSDLLPLC*QRFVRVRGARR Trigger: CCTTCTGGCCCCTCTGACCCTAACAAATCTCTGGCAGCAGAGAGGCAGAAGATCTGAAGAGGAATCTGTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 ENSMUST00000117217.8 |
||
| 3UTR CCA 72 bp | CACTACTTGTCTCATATTGAGGGAATGTCTGCTGCTTaGCCAGGCTTGGCGACTGATGTGGATGAGTTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: HYLSHIEGMSAA*PGLATDVDELS Trigger: AGACAACTCATCCACATCAGTCGCCAAGCCTGGCCAAGCAGCAGACATTCCCTCAATATGAGACAAGTAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 |
||
| 3UTR CCA 72 bp | GCTAGAGCAGTATTGGCTGGCTTAGCAGTAAGCACATaGGAGGCTGAGTCAGTGCCATTAGCTTGTAACACA | + |
|
Preference number: 3 (lower is better) Translates to: ARAVLAGLAVST*EAESVPLACNT Trigger: TGTGTTACAAGCTAATGGCACTGACTCAGCCTCCCATGTGCTTACTGCTAAGCCAGCCAATACTGCTCTAGC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110298.9 |
||
| 3UTR-3UTR CAA 90 bp | CAGAAGCCAGAATCTCATCCCTGTAAAACTTATGGGAACAAAACTTCAAGGACAGGACTGTGCTTGGACTaGCTCCTTGGGACCTCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: QKPESHPCKTYGNKTSRTGLCLD*LLGTSG Trigger: CCCAGAGGTCCCAAGGAGCAAGTCCAAGCACAGTCC...TGTCCTTGAAGTTTTGTTCCCATAAGTTTTACAGGGATGAGATTCTGGCTTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 ENSMUST00000117217.8 |
||
| 3UTR-3UTR CAA 90 bp | AGTCCCCGGATGTATGGCTGCAATTTCCTTGTTAGCAGCATCAGGGACATGGGCAGCTTTCTTGGCATCTaGCAACTGTTTCATGATCTC | + |
|
Preference number: 3 (lower is better) Translates to: SPRMYGCNFLVSSIRDMGSFLGI*QLFHDL Trigger: GAGATCATGAAACAGTTGCAAGATGCCAAGAAAGCT...GCCCATGTCCCTGATGCTGCTAACAAGGAAATTGCAGCCATACATCCGGGGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110298.9 |
||
| 3UTR-3UTR CAA 90 bp | TATTCTGTAACTCAAAATGGAAGCTCAGCTTTATCCCCAGACTACAGCTCTACTGGGGATGGAGCAGTGTaGCCAGGAGCCACTGATGGA | + |
|
Preference number: 3 (lower is better) Translates to: YSVTQNGSSALSPDYSSTGDGAV*PGATDG Trigger: TCCATCAGTGGCTCCTGGCAACACTGCTCCATCCCC...AGTAGAGCTGTAGTCTGGGGATAAAGCTGAGCTTCCATTTTGAGTTACAGAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000110298.9 |
||
| 3UTR-3UTR CAA 90 bp | GCTTTGAATACAGATTCCTCTTCAGATCTTCTGCCTCTCTGCTGCCAGAGATTTACCAATGTCACTGGTTaGGTCATTGGGGCGGAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: ALNTDSSSDLLPLCCQRFTNVTG*VIGAEE Trigger: CTCCTCCGCCCCAATGACCAAACCAGTGACATTGGT...AAATCTCTGGCAGCAGAGAGGCAGAAGATCTGAAGAGGAATCTGTATTCAAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110298.9 |
||
| 3UTR TCA 72 bp | CTGTCTCAGCTTTCTTGGCATCTTGCAACTGTTTCATaGTCTCCTCTCTTTCGGCTTGCTCAGTGGCAGTTG | + |
|
Preference number: 3 (lower is better) Translates to: LSQLSWHLATVS*SPLFRLAQWQL Trigger: CAACTGCCACTGAGCAAGCCGAAAGAGAGGAGATCATGAAACAGTTGCAAGATGCCAAGAAAGCTGAGACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110298.9 |
||
| 3UTR GCA 72 bp | TTGAATACAGATTCCTCTTCAGATCTTCTGCCTCTCTaGTGCCAGAGATTTGTTAGGGTCAGAGGGGCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: LNTDSSSDLLPL*CQRFVRVRGAR Trigger: TCTGGCCCCTCTGACCCTAACAAATCTCTGGCAGCAGAGAGGCAGAAGATCTGAAGAGGAATCTGTATTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 ENSMUST00000117217.8 |
||
| 3UTR CCA 72 bp | TTGGGACCTCTGGGATTAGTGAAAAGTGTGCTGATCTaGAAAGCAAACAAAGTCCCCTTTGCTCCTTTGCCC | + |
|
Preference number: 3 (lower is better) Translates to: LGPLGLVKSVLI*KANKVPFAPLP Trigger: GGGCAAAGGAGCAAAGGGGACTTTGTTTGCTTTCCAGATCAGCACACTTTTCACTAATCCCAGAGGTCCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 ENSMUST00000117217.8 |
||
| 3UTR CCA 72 bp | ATAGTGGAAGGCAACTCATTGATGCGTAGGGACAGCTaGCGTTTAAAGGGTGACATCTTCTGGCTAAGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: IVEGNSLMRRDS*RLKGDIFWLRA Trigger: TGCTCTTAGCCAGAAGATGTCACCCTTTAAACGCCAGCTGTCCCTACGCATCAATGAGTTGCCTTCCACTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110298.9 |
||
| 3UTR-3UTR CAA 90 bp | TATTCCAGTAAATGTGCTTTGAATACAGATTCCTCTTCAGATCTTCTGCCTCTCCTTGCTGGACTGTGCTaGGACTTGCTCCTTGGGACC | + |
|
Preference number: 3 (lower is better) Translates to: YSSKCALNTDSSSDLLPLLAGLC*DLLLGT Trigger: GGTCCCAAGGAGCAAGTCCAAGCACAGTCCAGCAAG...GAGAGGCAGAAGATCTGAAGAGGAATCTGTATTCAAAGCACATTTACTGGAATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 ENSMUST00000117217.8 |
||
| 3UTR-3UTR CAA 90 bp | TATTCCAGTAAATGTGCTTTGAATACAGATTCCTCTTCAGATCTTCTGCCTCTCACTGATGTGGATGAGTaGTCTGAGGGTGGCCTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: YSSKCALNTDSSSDLLPLTDVDE*SEGGLQ Trigger: CTGCAGGCCACCCTCAGACAACTCATCCACATCAGT...GAGAGGCAGAAGATCTGAAGAGGAATCTGTATTCAAAGCACATTTACTGGAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 |
||
| 3UTR GCA 72 bp | ACAACTGTCTTGTCTGTCTCAGCTTTCTTGGCATCTTaGAACTGTTTCATGATCTCCTCTCTTTCGGCTTGC | + |
|
Preference number: 3 (lower is better) Translates to: TTVLSVSAFLAS*NCFMISSLSAC Trigger: GCAAGCCGAAAGAGAGGAGATCATGAAACAGTTGCAAGATGCCAAGAAAGCTGAGACAGACAAGACAGTTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110298.9 |
||
| 3UTR-3UTR CAA 90 bp | CAGAAGCCAGAATCTCATCCCTGTAAAACTTATGGGAACAAAACTTCAAGGACATGTGCTAGAGCAGTATaGGCTGGCTTAGCAGTAAGC | + |
|
Preference number: 3 (lower is better) Translates to: QKPESHPCKTYGNKTSRTCARAV*AGLAVS Trigger: GCTTACTGCTAAGCCAGCCAATACTGCTCTAGCACA...TGTCCTTGAAGTTTTGTTCCCATAAGTTTTACAGGGATGAGATTCTGGCTTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 |
||
| 3UTR-3UTR CAA 90 bp | TATTCCAGTAAATGTGCTTTGAATACAGATTCCTCTTCAGATCTTCTGCCTCTCTTTCACGGACAGGCATaGCTACGTGTGCTAGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: YSSKCALNTDSSSDLLPLFHGQA*LRVLEQ Trigger: CTGCTCTAGCACACGTAGCAATGCCTGTCCGTGAAA...GAGAGGCAGAAGATCTGAAGAGGAATCTGTATTCAAAGCACATTTACTGGAATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 |
||
| 3UTR-3UTR CAA 90 bp | ATGACATTAGAATTTCACCATAGGTTTAAAACCAGGACAACACTGCTTGCTCATGGGCCCGCACACTCTTaGACACTTCTTCTAACCAGC | + |
|
Preference number: 3 (lower is better) Translates to: MTLEFHHRFKTRTTLLAHGPAHS*TLLLTS Trigger: GCTGGTTAGAAGAAGTGTCAAAGAGTGTGCGGGCCC...ATGAGCAAGCAGTGTTGTCCTGGTTTTAAACCTATGGTGAAATTCTAATGTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 |
||
| 3UTR-3UTR CAA 90 bp | ATTGCTAAGACAGCCCAGGACTGGGAGGAACGGGTGACTGGCCTGAAAAATAAATCCAGTAAATGTGCTTaGAATACAGATTCCTCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: IAKTAQDWEERVTGLKNKSSKCA*NTDSSS Trigger: TGAAGAGGAATCTGTATTCAAAGCACATTTACTGGA...TTTATTTTTCAGGCCAGTCACCCGTTCCTCCCAGTCCTGGGCTGTCTTAGCAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 ENSMUST00000117217.8 |
||
| 3UTR-3UTR CAA 90 bp | ATGTACAATTTCTTACATCTAACCCGCTCACTTTTGGCAAGATTACTTACAACTTCACTGGTTTGGTCATaGGGGCGGAGGAGAAGGGGT | + |
|
Preference number: 3 (lower is better) Translates to: MYNFLHLTRSLLARLLTTSLVWS*GRRRRG Trigger: ACCCCTTCTCCTCCGCCCCAATGACCAAACCAGTGA...AGTTGTAAGTAATCTTGCCAAAAGTGAGCGGGTTAGATGTAAGAAATTGTACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000110298.9 |
||
| 3UTR-3UTR CAA 90 bp | ATGTACAATTTCTTACATCTAACCCGCTCACTTTTGGCAAGATTACTTACAACTGCAGTGCCAAACACATaGGCTACCATCTGGGATGGG | + |
|
Preference number: 3 (lower is better) Translates to: MYNFLHLTRSLLARLLTTAVPNT*ATIWDG Trigger: CCCATCCCAGATGGTAGCCAATGTGTTTGGCACTGC...AGTTGTAAGTAATCTTGCCAAAAGTGAGCGGGTTAGATGTAAGAAATTGTACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 |
||
| 3UTR-3UTR CAA 90 bp | GCTTTGAATACAGATTCCTCTTCAGATCTTCTGCCTCTCTGCTGCCAGAGATTTCTAACCCGCTCACTTTaGGCAAGATTACTTACAACT | + |
|
Preference number: 3 (lower is better) Translates to: ALNTDSSSDLLPLCCQRFLTRSL*ARLLTT Trigger: AGTTGTAAGTAATCTTGCCAAAAGTGAGCGGGTTAG...AAATCTCTGGCAGCAGAGAGGCAGAAGATCTGAAGAGGAATCTGTATTCAAAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 ENSMUST00000117217.8 |
||
| 3UTR-3UTR CAA 90 bp | ATGTACAATTTCTTACATCTAACCCGCTCACTTTTGGCAAGATTACTTACAACTTGTGCTAGAGCAGTATaGGCTGGCTTAGCAGTAAGC | + |
|
Preference number: 3 (lower is better) Translates to: MYNFLHLTRSLLARLLTTCARAV*AGLAVS Trigger: GCTTACTGCTAAGCCAGCCAATACTGCTCTAGCACA...AGTTGTAAGTAATCTTGCCAAAAGTGAGCGGGTTAGATGTAAGAAATTGTACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 |
||
| 3UTR-3UTR CAA 90 bp | CAATTTCTTACATCTAACCCGCTCACTTTTGGCAAGATTACTTACAACTCATACTCTGTCTCAGCTTTCTaGGCATCTTGCAACTGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: QFLTSNPLTFGKITYNSYSVSAF*ASCNCF Trigger: GAAACAGTTGCAAGATGCCAAGAAAGCTGAGACAGA...GTATGAGTTGTAAGTAATCTTGCCAAAAGTGAGCGGGTTAGATGTAAGAAATTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110298.9 |
||
| 3UTR TCA 72 bp | AACCGACACAATAGCCTGCGTTCCCTTTTCTGGATATaGTTATGTCATTGTCACCGTAATGCTAAAGGATTA | + |
|
Preference number: 3 (lower is better) Translates to: NRHNSLRSLFWI*LCHCHRNAKGL Trigger: TAATCCTTTAGCATTACGGTGACAATGACATAATCATATCCAGAAAAGGGAACGCAGGCTATTGTGTCGGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 ENSMUST00000117217.8 |
||
| 3UTR CCA 72 bp | ACATATGTAAGAAAAGGCTCTGTCAAAGTTCCTATCTaGGGCACAGAAGGAAACTTTTTCTATTGTCTGGTC | + |
|
Preference number: 3 (lower is better) Translates to: TYVRKGSVKVPI*GTEGNFFYCLV Trigger: GACCAGACAATAGAAAAAGTTTCCTTCTGTGCCCCAGATAGGAACTTTGACAGAGCCTTTTCTTACATATGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110298.9 |
||
| CDS-3UTR CCA 90 bp | GGAAGGCATGTCCTTGGAAAGGAGGTGCTGGAGGGGCAATGGCGGCGGGCGGAGGCACAGCCCACGGCGTaGCTCAGTCTTTCCCCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: GRHVLGKEVLEGQWRRAEAQPTA*LSLSPV Trigger: CACGGGGGAAAGACTGAGCCACGCCGTGGGCTGTGC...CTCCGCCCGCCGCCATTGCCCCTCCAGCACCTCCTTTCCAAGGACATGCCTTCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085215.11 |
||
| CDS-3UTR CCA 90 bp | GGAAGGCATGTCCTTGGAAAGGAGGTGCTGGAGGGGCAATGGCGGCGGGCGGAGTGTCTGCCACTGATGTaGACGGCTGGCCTCTGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: GRHVLGKEVLEGQWRRAECLPLM*TAGLWD Trigger: GTCCCAGAGGCCAGCCGTCCACATCAGTGGCAGACA...CTCCGCCCGCCGCCATTGCCCCTCCAGCACCTCCTTTCCAAGGACATGCCTTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 |
||
| CDS-3UTR TCA 90 bp | CTGGAAAGCAAACAAAGTCCCCTTTGCTCCTTTGCCCTCCACCCCCTGCTCTTGGGGGCAGCTGAGACCTaGGGCTGCTGGGCCCGCACA | + |
|
Preference number: 4 (lower is better) Translates to: LESKQSPLCSFALHPLLLGAAET*GCWART Trigger: TGTGCGGGCCCAGCAGCCTCAGGTCTCAGCTGCCCC...CAAGAGCAGGGGGTGGAGGGCAAAGGAGCAAAGGGGACTTTGTTTGCTTTCCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000117217.8 |
||
| CDS-3UTR TCA 90 bp | TCCCGTGAACCCAGCAGCATAGCCTGCCTGGCTTCACCCAGCCACACTGTCCCCCCATCTGGGATGGGGTaGTGCCCACTACAGGCACAT | + |
|
Preference number: 4 (lower is better) Translates to: SREPSSIACLASPSHTVPPSGMG*CPLQAH Trigger: ATGTGCCTGTAGTGGGCATCACCCCATCCCAGATGG...GGGGACAGTGTGGCTGGGTGAAGCCAGGCAGGCTATGCTGCTGGGTTCACGGGA 62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000117217.8 |
||
| CDS-3UTR TCA 90 bp | TCCCGTGAACCCAGCAGCATAGCCTGCCTGGCTTCACCCAGCCACACTGTCCCCCCCCGGAAAGAGCCTTaGCGAGCAAGCTGTTCAATT | + |
|
Preference number: 4 (lower is better) Translates to: SREPSSIACLASPSHTVPPRKEP*RASCSI Trigger: AATTGAACAGCTTGCTCGTCAAGGCTCTTTCCGGGG...GGGGACAGTGTGGCTGGGTGAAGCCAGGCAGGCTATGCTGCTGGGTTCACGGGA 60% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000117217.8 |
||
| CDS-3UTR GCA 90 bp | GCCAGAAGGCCAGGTTTCCTTGGCTTCTCTAGCCTAGCTGCAGGGCAGTCCTCCGGGATGGAGCAGTGTTaGCAGGAGCCACTGATGGAC | + |
|
Preference number: 4 (lower is better) Translates to: ARRPGFLGFSSLAAGQSSGMEQC*QEPLMD Trigger: GTCCATCAGTGGCTCCTGGCAACACTGCTCCATCCC...GGAGGACTGCCCTGCAGCTAGGCTAGAGAAGCCAAGGAAACCTGGCCTTCTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000117217.8 |
||
| CDS-3UTR CCA 90 bp | GTTAGCAGCATCAGGGACATGGGCCCAGGGGTTGGTTTCACGGACAGGCATTGCCAGTGCCATCCGGAGTaGGAGAGGTGGGAGAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: VSSIRDMGPGVGFTDRHCQCHPE*ERWERM Trigger: CATCCTCTCCCACCTCTCCCACTCCGGATGGCACTG...GCAATGCCTGTCCGTGAAACCAACCCCTGGGCCCATGTCCCTGATGCTGCTAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085215.11 |
||
| 3UTR CAA 72 bp | CAGGGAGGCTTGCCTCACTTCTGTGGACGTCACCCCTaGCTGGACTGTGCTTGGACTTGCTCCTTGGGACCT | + |
|
Preference number: 4 (lower is better) Translates to: QGGLPHFCGRHP*LDCAWTCSLGP Trigger: AGGTCCCAAGGAGCAAGTCCAAGCACAGTCCAGCAAGGGGTGACGTCCACAGAAGTGAGGCAAGCCTCCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 ENSMUST00000117217.8 |
||
| CDS-3UTR GCA 90 bp | GCCAGAAGGCCAGGTTTCCTTGGCTTCTCTAGCCTAGCTGCAGGGCAGTCCTCCTGTCTGAGGGTGGCCTaGAGTGCCAAACACATTGGC | + |
|
Preference number: 4 (lower is better) Translates to: ARRPGFLGFSSLAAGQSSCLRVA*SAKHIG Trigger: GCCAATGTGTTTGGCACTGCAGGCCACCCTCAGACA...GGAGGACTGCCCTGCAGCTAGGCTAGAGAAGCCAAGGAAACCTGGCCTTCTGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117217.8 |
||
| CDS-3UTR CCA 90 bp | CCTCTCTGCTGCCAGAGATTTGTTAGGGTCAGAGGGGCCAGAAGGCCAGGTTTCTGTCTGCCACTGATGTaGACGGCTGGCCTCTGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: PLCCQRFVRVRGARRPGFCLPLM*TAGLWD Trigger: GTCCCAGAGGCCAGCCGTCCACATCAGTGGCAGACA...GAAACCTGGCCTTCTGGCCCCTCTGACCCTAACAAATCTCTGGCAGCAGAGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 ENSMUST00000117217.8 |
||
| CDS-3UTR TCA 90 bp | CAGCATAGCCTGCCTGGCTTCACCCAGCCACACTGTCCCCATCGAGCGATTGCTCCCCGGAAAGAGCCTTaGCGAGCAAGCTGTTCAATT | + |
|
Preference number: 4 (lower is better) Translates to: QHSLPGFTQPHCPHRAIAPRKEP*RASCSI Trigger: AATTGAACAGCTTGCTCGTCAAGGCTCTTTCCGGGG...AGCAATCGCTCGATGGGGACAGTGTGGCTGGGTGAAGCCAGGCAGGCTATGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000117217.8 |
||
| CDS-3UTR GCA 90 bp | CCTCTCTGCTGCCAGAGATTTGTTAGGGTCAGAGGGGCCAGAAGGCCAGGTTTCGGGATGGAGCAGTGTTaGCAGGAGCCACTGATGGAC | + |
|
Preference number: 4 (lower is better) Translates to: PLCCQRFVRVRGARRPGFGMEQC*QEPLMD Trigger: GTCCATCAGTGGCTCCTGGCAACACTGCTCCATCCC...GAAACCTGGCCTTCTGGCCCCTCTGACCCTAACAAATCTCTGGCAGCAGAGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000117217.8 |
||
| CDS-3UTR GCA 90 bp | ACCTGGAGAGGCAGCACCAGAAGACTGACCCCACTCAGTCCCCGGATGTATGGCTGTTCAATTGGTGCATaGCGGCGTGGGATAGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: TWRGSTRRLTPLSPRMYGCSIGA*RRGIAW Trigger: CCATGCTATCCCACGCCGGCATGCACCAATTGAACA...GCCATACATCCGGGGACTGAGTGGGGTCAGTCTTCTGGTGCTGCCTCTCCAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085215.11 |
||
| CDS-3UTR GCA 90 bp | GCCAGAAGGCCAGGTTTCCTTGGCTTCTCTAGCCTAGCTGCAGGGCAGTCCTCCTACGCTGCTTGGACTTaGTTTCTAGTGCGGCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: ARRPGFLGFSSLAAGQSSYAAWT*FLVRPT Trigger: AGTGGGCCGCACTAGAAAGCAAGTCCAAGCAGCGTA...GGAGGACTGCCCTGCAGCTAGGCTAGAGAAGCCAAGGAAACCTGGCCTTCTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117217.8 |
||
| CDS-3UTR CCA 90 bp | GTGCGGCCCACTGAGCTTCGAAAGGATCCACTGGGCAGGTGCCTGGAGGGACTTTGGACGGCTGGCCTCTaGGACATAAACGTCTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VRPTELRKDPLGRCLEGLWTAGL*DINVFL Trigger: AAGAAAGACGTTTATGTCCCAGAGGCCAGCCGTCCA...AAGTCCCTCCAGGCACCTGCCCAGTGGATCCTTTCGAAGCTCAGTGGGCCGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 |
||
| CDS-3UTR CCA 90 bp | ACACTTCTTCTAACCAGCGGTCAGCTTCAGAGGGAGTGCGTCTGTGACCAGCCTTGTCTGCCACTGATGTaGACGGCTGGCCTCTGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: TLLLTSGQLQRECVCDQPCLPLM*TAGLWD Trigger: GTCCCAGAGGCCAGCCGTCCACATCAGTGGCAGACA...AGGCTGGTCACAGACGCACTCCCTCTGAAGCTGACCGCTGGTTAGAAGAAGTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 |
||
| CDS-3UTR CCA 90 bp | TCAAGTAGCTGCAACTGGCATGGGATGCTCTGTTCATGGTTGGGGCAGAAGGGGGGGAGAGGATGGGGATaGAGCAGTGTTGCCAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SSSCNWHGMLCSWLGQKGGRGWG*SSVARS Trigger: GCTCCTGGCAACACTGCTCCATCCCCATCCTCTCCC...CCCCTTCTGCCCCAACCATGAACAGAGCATCCCATGCCAGTTGCAGCTACTTGA 58% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000117217.8 |
||
| 3UTR CAA 72 bp | CAGCTGAGACCTGAGGCTGCTGGGCCCGCACACTCTTaGACACTTCTTCTAACCAGCGGTCAGCTTCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: QLRPEAAGPAHS*TLLLTSGQLQR Trigger: CCTCTGAAGCTGACCGCTGGTTAGAAGAAGTGTCAAAGAGTGTGCGGGCCCAGCAGCCTCAGGTCTCAGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 |
||
| 3UTR CAA 72 bp | GCTGCTTGGCCAGGCTTGGCGACTGATGTGGATGAGTaGTCTGAGGGTGGCCTGCAGTGCCAAACACATTGG | + |
|
Preference number: 4 (lower is better) Translates to: AAWPGLATDVDE*SEGGLQCQTHW Trigger: CCAATGTGTTTGGCACTGCAGGCCACCCTCAGACAACTCATCCACATCAGTCGCCAAGCCTGGCCAAGCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 |
||
| CDS-3UTR TCA 90 bp | TCAAGTAGCTGCAACTGGCATGGGATGCTCTGTTCATGGTTGGGGCAGAAGGGGTCATCTGTCTGCCACTaGTGTGGACGGCTGGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SSSCNWHGMLCSWLGQKGSSVCH*CGRLAS Trigger: AGAGGCCAGCCGTCCACATCAGTGGCAGACAGATGA...CCCCTTCTGCCCCAACCATGAACAGAGCATCCCATGCCAGTTGCAGCTACTTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 ENSMUST00000117217.8 |
||
| CDS-3UTR TCA 90 bp | AGCCTGCCTGGCTTCACCCAGCCACACTGTCCCCATCGAGCGATTGCTAAGACAGGGATTGTTCATCTCTaGAGATGCAGTGCCATCCGG | + |
|
Preference number: 4 (lower is better) Translates to: SLPGFTQPHCPHRAIAKTGIVHL*RCSAIR Trigger: CCGGATGGCACTGCATCTTCAGAGATGAACAATCCC...TGTCTTAGCAATCGCTCGATGGGGACAGTGTGGCTGGGTGAAGCCAGGCAGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000117217.8 |
||
| CDS-3UTR TCA 90 bp | ACTTCTGTGGACGTCACCCCTTGCTGGACTGTGCTTGGACTTGCTCCTTGGGACTGGAAGGCAACTCATTaGTGCGTAGGGACAGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: TSVDVTPCWTVLGLAPWDWKATH*CVGTAG Trigger: GCCAGCTGTCCCTACGCATCAATGAGTTGCCTTCCA...GTCCCAAGGAGCAAGTCCAAGCACAGTCCAGCAAGGGGTGACGTCCACAGAAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000117217.8 |
||
| CDS-3UTR GCA 90 bp | AGCCTGCCTGGCTTCACCCAGCCACACTGTCCCCATCGAGCGATTGCTAAGACAAAGCTGTTCAATTGGTaGATGCCGGCGTGGGATAGC | + |
|
Preference number: 4 (lower is better) Translates to: SLPGFTQPHCPHRAIAKTKLFNW*MPAWDS Trigger: GCTATCCCACGCCGGCATGCACCAATTGAACAGCTT...TGTCTTAGCAATCGCTCGATGGGGACAGTGTGGCTGGGTGAAGCCAGGCAGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000117217.8 |
||
| CDS-3UTR GCA 90 bp | CTGGAAAGCAAACAAAGTCCCCTTTGCTCCTTTGCCCTCCACCCCCTGCTCTTGGATCCACTGGGCAGGTaGCTGGAGGGACTTCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LESKQSPLCSFALHPLLLDPLGR*LEGLLH Trigger: ATGCAGAAGTCCCTCCAGGCACCTGCCCAGTGGATC...CAAGAGCAGGGGGTGGAGGGCAAAGGAGCAAAGGGGACTTTGTTTGCTTTCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117217.8 |
||
| CDS-3UTR CCA 90 bp | CAGCATAGCCTGCCTGGCTTCACCCAGCCACACTGTCCCCATCGAGCGATTGCTAGATCCATCGCCGAGTaGTGCCATCACGACATATGT | + |
|
Preference number: 4 (lower is better) Translates to: QHSLPGFTQPHCPHRAIARSIAE*CHHDIC Trigger: ACATATGTCGTGATGGCACCACTCGGCGATGGATCT...AGCAATCGCTCGATGGGGACAGTGTGGCTGGGTGAAGCCAGGCAGGCTATGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000117217.8 |
||
| CDS-3UTR CCA 90 bp | CTGGAAAGCAAACAAAGTCCCCTTTGCTCCTTTGCCCTCCACCCCCTGCTCTTGCACTGGTTTGGTCATTaGGGCGGAGGAGAAGGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LESKQSPLCSFALHPLLLHWFGH*GGGEGV Trigger: GACCCCTTCTCCTCCGCCCCAATGACCAAACCAGTG...CAAGAGCAGGGGGTGGAGGGCAAAGGAGCAAAGGGGACTTTGTTTGCTTTCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000117217.8 |
||
| CDS-3UTR CCA 90 bp | CCTCTCTGCTGCCAGAGATTTGTTAGGGTCAGAGGGGCCAGAAGGCCAGGTTTCAGCCTGGAAGAGACCTaGAGAGGCAGCACCAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: PLCCQRFVRVRGARRPGFSLEET*RGSTRR Trigger: TCTTCTGGTGCTGCCTCTCCAGGTCTCTTCCAGGCT...GAAACCTGGCCTTCTGGCCCCTCTGACCCTAACAAATCTCTGGCAGCAGAGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117217.8 |
||
| CDS-3UTR CCA 90 bp | CTGGAAAGCAAACAAAGTCCCCTTTGCTCCTTTGCCCTCCACCCCCTGCTCTTGAGGCACATTAGAGGCTaGGTAGGGCATCCCGTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LESKQSPLCSFALHPLLLRHIRG*VGHPVG Trigger: GCCAACGGGATGCCCTACCCAGCCTCTAATGTGCCT...CAAGAGCAGGGGGTGGAGGGCAAAGGAGCAAAGGGGACTTTGTTTGCTTTCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117217.8 |
||
| CDS-3UTR CCA 90 bp | AGCCTGCCTGGCTTCACCCAGCCACACTGTCCCCATCGAGCGATTGCTAAGACAGCTTGGCGACTGATGTaGATGAGTTGTCTGAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SLPGFTQPHCPHRAIAKTAWRLM*MSCLRV Trigger: CACCCTCAGACAACTCATCCACATCAGTCGCCAAGC...TGTCTTAGCAATCGCTCGATGGGGACAGTGTGGCTGGGTGAAGCCAGGCAGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117217.8 |
||
| 3UTR CAA 72 bp | AACACAGGAGACTGTGGTGCCACCAATGTCACTGGTTaGGTCATTGGGGCGGAGGAGAAGGGGTCCTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: NTGDCGATNVTG*VIGAEEKGSSE Trigger: CTCTGAGGACCCCTTCTCCTCCGCCCCAATGACCAAACCAGTGACATTGGTGGCACCACAGTCTCCTGTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110298.9 |
||
| CDS-3UTR CCA 90 bp | CCTCTCTGCTGCCAGAGATTTGTTAGGGTCAGAGGGGCCAGAAGGCCAGGTTTCACTGATGTGGACGGCTaGCCTCTGGGACATAAACGT | + |
|
Preference number: 4 (lower is better) Translates to: PLCCQRFVRVRGARRPGFTDVDG*PLGHKR Trigger: ACGTTTATGTCCCAGAGGCCAGCCGTCCACATCAGT...GAAACCTGGCCTTCTGGCCCCTCTGACCCTAACAAATCTCTGGCAGCAGAGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 ENSMUST00000117217.8 |
||
| CDS-3UTR CCA 90 bp | CTGGAAAGCAAACAAAGTCCCCTTTGCTCCTTTGCCCTCCACCCCCTGCTCTTGTGGTGCATGCCGGCGTaGGATAGCATGGGGATTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LESKQSPLCSFALHPLLLWCMPA*DSMGIV Trigger: AACAATCCCCATGCTATCCCACGCCGGCATGCACCA...CAAGAGCAGGGGGTGGAGGGCAAAGGAGCAAAGGGGACTTTGTTTGCTTTCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000117217.8 |
||
| 3UTR CAA 72 bp | TCCTTGTTAGCAGCATCAGGGACATGGGCCCAGGGGTaGGTTTCACGGACAGGCATTGCTACGTGTGCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: SLLAASGTWAQG*VSRTGIATCAR Trigger: TCTAGCACACGTAGCAATGCCTGTCCGTGAAACCAACCCCTGGGCCCATGTCCCTGATGCTGCTAACAAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 |
||
| 3UTR CAA 72 bp | CCTCTTCAGATCTTCTGCCTCTCTGCTGCCAGAGATTaGTTAGGGTCAGAGGGGCCAGAAGGCCAGGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PLQIFCLSAARD*LGSEGPEGQVS Trigger: GGAAACCTGGCCTTCTGGCCCCTCTGACCCTAACAAATCTCTGGCAGCAGAGAGGCAGAAGATCTGAAGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 ENSMUST00000117217.8 |
||
| 3UTR CAA 72 bp | CTTCTGGCTAAGAGCAGGAAATCCCCGGAAAGAGCCTaGACGAGCAAGCTGTTCAATTGGTGCATGCCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: LLAKSRKSPERA*TSKLFNWCMPA Trigger: CGCCGGCATGCACCAATTGAACAGCTTGCTCGTCAAGGCTCTTTCCGGGGATTTCCTGCTCTTAGCCAGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110298.9 |
||
| CDS-3UTR TCA 90 bp | GTCACTGGAGAAAGGGTTGGTAGGAGAAGGATTTGTACGCTGCTTGGACTTGCTTCTCGTCCACAACTCTaGGCCCATCCGCTGACACCC | + |
|
Preference number: 4 (lower is better) Translates to: VTGERVGRRRICTLLGLASRPQL*AHPLTP Trigger: GGGTGTCAGCGGATGGGCTCAGAGTTGTGGACGAGA...AGCAAGTCCAAGCAGCGTACAAATCCTTCTCCTACCAACCCTTTCTCCAGTGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085215.11 |
||
| CDS-3UTR TCA 90 bp | CCCGCACACTCTTTGACACTTCTTCTAACCAGCGGTCAGCTTCAGAGGGAGTGCGTTGCCAGGAGCCACTaGTGGACCAACAACTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PAHSLTLLLTSGQLQRECVARSH*WTNNCL Trigger: AAGACAGTTGTTGGTCCATCAGTGGCTCCTGGCAAC...GCACTCCCTCTGAAGCTGACCGCTGGTTAGAAGAAGTGTCAAAGAGTGTGCGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085215.11 |
||
| CDS-3UTR CCA 90 bp | AGCCTGCCTGGCTTCACCCAGCCACACTGTCCCCATCGAGCGATTGCTAAGACATCATCAACTTCTACGTaGCCGAGGTACTTAACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SLPGFTQPHCPHRAIAKTSSTST*PRYLTG Trigger: CCCAGTTAAGTACCTCGGCCACGTAGAAGTTGATGA...TGTCTTAGCAATCGCTCGATGGGGACAGTGTGGCTGGGTGAAGCCAGGCAGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 ENSMUST00000117217.8 |
||
| CDS-3UTR CCA 90 bp | ACACTCTTTGACACTTCTTCTAACCAGCGGTCAGCTTCAGAGGGAGTGCGTCTGAGAGGTGGGAGAGGATaGGGATGGAGCAGTGTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: TLFDTSSNQRSASEGVRLRGGRG*GWSSVA Trigger: GGCAACACTGCTCCATCCCCATCCTCTCCCACCTCT...CAGACGCACTCCCTCTGAAGCTGACCGCTGGTTAGAAGAAGTGTCAAAGAGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085215.11 |
||
| CDS-3UTR CCA 90 bp | ATTGCTAAGACAGCCCAGGACTGGGAGGAACGGGTGACTGGCCTGAAAAATAAACAGTGCCATCCGGAGTaGGAGAGGTGGGAGAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: IAKTAQDWEERVTGLKNKQCHPE*ERWERM Trigger: CATCCTCTCCCACCTCTCCCACTCCGGATGGCACTG...TTTATTTTTCAGGCCAGTCACCCGTTCCTCCCAGTCCTGGGCTGTCTTAGCAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000117217.8 |
||
| CDS-3UTR CCA 90 bp | CTGGAAAGCAAACAAAGTCCCCTTTGCTCCTTTGCCCTCCACCCCCTGCTCTTGAGCAAGCTGTTCAATTaGTGCATGCCGGCGTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LESKQSPLCSFALHPLLLSKLFN*CMPAWD Trigger: ATCCCACGCCGGCATGCACCAATTGAACAGCTTGCT...CAAGAGCAGGGGGTGGAGGGCAAAGGAGCAAAGGGGACTTTGTTTGCTTTCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000117217.8 |
||
| CDS-3UTR CCA 90 bp | TCAAGTAGCTGCAACTGGCATGGGATGCTCTGTTCATGGTTGGGGCAGAAGGGGCAGTGCCAAACACATTaGCTACCATCTGGGATGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SSSCNWHGMLCSWLGQKGQCQTH*LPSGMG Trigger: CCCCATCCCAGATGGTAGCCAATGTGTTTGGCACTG...CCCCTTCTGCCCCAACCATGAACAGAGCATCCCATGCCAGTTGCAGCTACTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117217.8 |
||
| 3UTR CAA 72 bp | TCACGGACAGGCATTGCTACGTGTGCTAGAGCAGTATaGGCTGGCTTAGCAGTAAGCACATGGGAGGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SRTGIATCARAV*AGLAVSTWEAE Trigger: CTCAGCCTCCCATGTGCTTACTGCTAAGCCAGCCAATACTGCTCTAGCACACGTAGCAATGCCTGTCCGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 |
||
| 3UTR CAA 72 bp | TCTCATATTGAGGGAATGTCTGCTGCTTGGCCAGGCTaGGCGACTGATGTGGATGAGTTGTCTGAGGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SHIEGMSAAWPG*ATDVDELSEGG Trigger: GCCACCCTCAGACAACTCATCCACATCAGTCGCCAAGCCTGGCCAAGCAGCAGACATTCCCTCAATATGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 |
||
| 3UTR CAA 72 bp | CTGTGGACGTCACCCCTTGCTGGACTGTGCTTGGACTaGCTCCTTGGGACCTCTGGGATTAGTGAAAAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LWTSPLAGLCLD*LLGTSGISEKC Trigger: ACACTTTTCACTAATCCCAGAGGTCCCAAGGAGCAAGTCCAAGCACAGTCCAGCAAGGGGTGACGTCCACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 ENSMUST00000117217.8 |
||
| 3UTR CAA 72 bp | TCACTTCTGTGGACGTCACCCCTTGCTGGACTGTGCTaGGACTTGCTCCTTGGGACCTCTGGGATTAGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SLLWTSPLAGLC*DLLLGTSGISE Trigger: TTCACTAATCCCAGAGGTCCCAAGGAGCAAGTCCAAGCACAGTCCAGCAAGGGGTGACGTCCACAGAAGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 ENSMUST00000117217.8 |
||
| 3UTR CAA 72 bp | TCAATTGGTGCATGCCGGCGTGGGATAGCATGGGGATaGTTCATCTCTGAAGATGCAGTGCCATCCGGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SIGACRRGIAWG*FISEDAVPSGV Trigger: CACTCCGGATGGCACTGCATCTTCAGAGATGAACAATCCCCATGCTATCCCACGCCGGCATGCACCAATTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110298.9 |
||
| CDS-3UTR TCA 90 bp | AGCCTGCCTGGCTTCACCCAGCCACACTGTCCCCATCGAGCGATTGCTAAGACACGTCTTTCTTTCTCCTaGAGCTTTGCCGTAGTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SLPGFTQPHCPHRAIAKTRLSFS*SFAVVC Trigger: ACAAACTACGGCAAAGCTTCAGGAGAAAGAAAGACG...TGTCTTAGCAATCGCTCGATGGGGACAGTGTGGCTGGGTGAAGCCAGGCAGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 ENSMUST00000117217.8 |
||
| CDS-3UTR TCA 90 bp | CAGCATAGCCTGCCTGGCTTCACCCAGCCACACTGTCCCCATCGAGCGATTGCTAGTTGTGACACGGAATaGTCCTTCTCTTGTGAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: QHSLPGFTQPHCPHRAIASCDTE*SFSCES Trigger: ACTTTCACAAGAGAAGGATCATTCCGTGTCACAACT...AGCAATCGCTCGATGGGGACAGTGTGGCTGGGTGAAGCCAGGCAGGCTATGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000117217.8 |
||
| CDS-3UTR CCA 90 bp | TGGACTTGCTTTCTAGTGCGGCCCACTGAGCTTCGAAAGGATCCACTGGGCAGGGCCGAGGTACTTAACTaGGAAGCTACACTTTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: WTCFLVRPTELRKDPLGRAEVLN*EATLSS Trigger: ACTGGAAAGTGTAGCTTCCCAGTTAAGTACCTCGGC...CCTGCCCAGTGGATCCTTTCGAAGCTCAGTGGGCCGCACTAGAAAGCAAGTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 |
||
| CDS-3UTR CCA 90 bp | CCCGCACACTCTTTGACACTTCTTCTAACCAGCGGTCAGCTTCAGAGGGAGTGCAGATCCATCGCCGAGTaGTGCCATCACGACATATGT | + |
|
Preference number: 4 (lower is better) Translates to: PAHSLTLLLTSGQLQRECRSIAE*CHHDIC Trigger: ACATATGTCGTGATGGCACCACTCGGCGATGGATCT...GCACTCCCTCTGAAGCTGACCGCTGGTTAGAAGAAGTGTCAAAGAGTGTGCGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085215.11 |
||
| CDS-3UTR CCA 90 bp | CCCTGTAAAACTTATGGGAACAAAACTTCAAGGACAGAGCCCATTAAGACCCACGCACAGCCCACGGCGTaGCTCAGTCTTTCCCCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: PCKTYGNKTSRTEPIKTHAQPTA*LSLSPV Trigger: CACGGGGGAAAGACTGAGCCACGCCGTGGGCTGTGC...GTGGGTCTTAATGGGCTCTGTCCTTGAAGTTTTGTTCCCATAAGTTTTACAGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000117217.8 |
||
| CDS-3UTR CCA 90 bp | CCCGCACACTCTTTGACACTTCTTCTAACCAGCGGTCAGCTTCAGAGGGAGTGCCGGCGTGGGATAGCATaGGGATTGTTCATCTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: PAHSLTLLLTSGQLQRECRRGIA*GLFISE Trigger: TTCAGAGATGAACAATCCCCATGCTATCCCACGCCG...GCACTCCCTCTGAAGCTGACCGCTGGTTAGAAGAAGTGTCAAAGAGTGTGCGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085215.11 |
||
| CDS-3UTR CCA 90 bp | TTTGTTAGGGTCAGAGGGGCCAGAAGGCCAGGTTTCCTTGGCTTCTCTAGCCTACCAATGTCACTGGTTTaGTCATTGGGGCGGAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: FVRVRGARRPGFLGFSSLPMSLV*SLGRRR Trigger: TCTCCTCCGCCCCAATGACCAAACCAGTGACATTGG...TAGGCTAGAGAAGCCAAGGAAACCTGGCCTTCTGGCCCCTCTGACCCTAACAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117217.8 |
||
| CDS-3UTR CCA 90 bp | ACTTCTGTGGACGTCACCCCTTGCTGGACTGTGCTTGGACTTGCTCCTTGGGACGATTTGTACGCTGCTTaGACTTGCTTTCTAGTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: TSVDVTPCWTVLGLAPWDDLYAA*TCFLVR Trigger: CCGCACTAGAAAGCAAGTCCAAGCAGCGTACAAATC...GTCCCAAGGAGCAAGTCCAAGCACAGTCCAGCAAGGGGTGACGTCCACAGAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117217.8 |
||
| CDS-3UTR TCA 90 bp | GCTTCGAAAGGATCCACTGGGCAGGTGCCTGGAGGGACTTCTGCATGCCTGTTTCGTCTTTCTTTCTCCTaGAGCTTTGCCGTAGTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: ASKGSTGQVPGGTSACLFRLSFS*SFAVVC Trigger: ACAAACTACGGCAAAGCTTCAGGAGAAAGAAAGACG...AAACAGGCATGCAGAAGTCCCTCCAGGCACCTGCCCAGTGGATCCTTTCGAAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 |
||
| CDS-3UTR TCA 90 bp | GCTTCGAAAGGATCCACTGGGCAGGTGCCTGGAGGGACTTCTGCATGCCTGTTTCTTGCAACTGTTTCATaGTCTCCTCTCTTTCGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: ASKGSTGQVPGGTSACLFLATVS*SPLFRL Trigger: AAGCCGAAAGAGAGGAGATCATGAAACAGTTGCAAG...AAACAGGCATGCAGAAGTCCCTCCAGGCACCTGCCCAGTGGATCCTTTCGAAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085215.11 |
||
| CDS-3UTR GCA 90 bp | CTGGAAAGCAAACAAAGTCCCCTTTGCTCCTTTGCCCTCCACCCCCTGCTCTTGAGCTACACTTTCCAGTaGGGACTCCTTCTTCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: LESKQSPLCSFALHPLLLSYTFQ*GLLLHL Trigger: CAGATGAAGAAGGAGTCCGCACTGGAAAGTGTAGCT...CAAGAGCAGGGGGTGGAGGGCAAAGGAGCAAAGGGGACTTTGTTTGCTTTCCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 ENSMUST00000117217.8 |
||
| CDS-3UTR GCA 90 bp | TCCTCTTCAGATCTTCTGCCTCTCTGCTGCCAGAGATTTGTTAGGGTCAGAGGGTGTTCAATTGGTGCATaGCGGCGTGGGATAGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: SSSDLLPLCCQRFVRVRGCSIGA*RRGIAW Trigger: CCATGCTATCCCACGCCGGCATGCACCAATTGAACA...CCCTCTGACCCTAACAAATCTCTGGCAGCAGAGAGGCAGAAGATCTGAAGAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000117217.8 |
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| CDS-3UTR CCA 90 bp | CATAGCCTGCCTGGCTTCACCCAGCCACACTGTCCCCATCGAGCGATTGCTAAGCTGTCTCAGCTTTCTTaGCATCTTGCAACTGTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: HSLPGFTQPHCPHRAIAKLSQLS*HLATVS Trigger: TGAAACAGTTGCAAGATGCCAAGAAAGCTGAGACAG...CTTAGCAATCGCTCGATGGGGACAGTGTGGCTGGGTGAAGCCAGGCAGGCTATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000117217.8 |
||
| CDS-3UTR CCA 90 bp | TATTCCAGTAAATGTGCTTTGAATACAGATTCCTCTTCAGATCTTCTGCCTCTCGCGGGCGGAGGCGGCTaGAGAACTGGCTGCAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: YSSKCALNTDSSSDLLPLAGGGG*RTGCRG Trigger: CCCTCTGCAGCCAGTTCTCCAGCCGCCTCCGCCCGC...GAGAGGCAGAAGATCTGAAGAGGAATCTGTATTCAAAGCACATTTACTGGAATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117217.8 |
||
| CDS-3UTR TCA 90 bp | TCAAGTAGCTGCAACTGGCATGGGATGCTCTGTTCATGGTTGGGGCAGAAGGGGCTTGCAACTGTTTCATaGTCTCCTCTCTTTCGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SSSCNWHGMLCSWLGQKGLATVS*SPLFRL Trigger: AAGCCGAAAGAGAGGAGATCATGAAACAGTTGCAAG...CCCCTTCTGCCCCAACCATGAACAGAGCATCCCATGCCAGTTGCAGCTACTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000117217.8 |
||
| CDS-3UTR GCA 90 bp | TGGACTTGCTTTCTAGTGCGGCCCACTGAGCTTCGAAAGGATCCACTGGGCAGGGCATCTTCACAGATGTaGATTCCTCTTGACTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: WTCFLVRPTELRKDPLGRASSQM*IPLDSS Trigger: TGATGAGTCAAGAGGAATGCACATCTGTGAAGATGC...CCTGCCCAGTGGATCCTTTCGAAGCTCAGTGGGCCGCACTAGAAAGCAAGTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 |
||
| CDS-3UTR GCA 90 bp | GTCACTGGAGAAAGGGTTGGTAGGAGAAGGATTTGTACGCTGCTTGGACTTGCTAAGCTGTTCAATTGGTaGATGCCGGCGTGGGATAGC | + |
|
Preference number: 4 (lower is better) Translates to: VTGERVGRRRICTLLGLAKLFNW*MPAWDS Trigger: GCTATCCCACGCCGGCATGCACCAATTGAACAGCTT...AGCAAGTCCAAGCAGCGTACAAATCCTTCTCCTACCAACCCTTTCTCCAGTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085215.11 |
||
| CDS-3UTR CCA 90 bp | TGCAATTTCCTTGTTAGCAGCATCAGGGACATGGGCCCAGGGGTTGGTTTCACGTCATCAACTTCTACGTaGCCGAGGTACTTAACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: CNFLVSSIRDMGPGVGFTSSTST*PRYLTG Trigger: CCCAGTTAAGTACCTCGGCCACGTAGAAGTTGATGA...CGTGAAACCAACCCCTGGGCCCATGTCCCTGATGCTGCTAACAAGGAAATTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 |
||
| CDS-3UTR CCA 90 bp | GACTGGGTAGGGACAAAGGCTGGTTGTAGGGGTGGGACCACACCCACGGGCACAACTTTTTCTATTGTCTaGTCAACTATGAGGTCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: DWVGTKAGCRGGTTPTGTTFSIV*STMRSL Trigger: TAAGGACCTCATAGTTGACCAGACAATAGAAAAAGT...TGTGCCCGTGGGTGTGGTCCCACCCCTACAACCAGCCTTTGTCCCTACCCAGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085215.11 |
||
| CDS-3UTR CCA 90 bp | AGACACACACAGCACAGAAGCCAGAATCTCATCCCTGTAAAACTTATGGGAACAGGGAGAGGATGGGGATaGAGCAGTGTTGCCAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RHTQHRSQNLIPVKLMGTGRGWG*SSVARS Trigger: GCTCCTGGCAACACTGCTCCATCCCCATCCTCTCCC...TGTTCCCATAAGTTTTACAGGGATGAGATTCTGGCTTCTGTGCTGTGTGTGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000117217.8 |
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| CDS-3UTR CCA 90 bp | AGTCCCCGGATGTATGGCTGCAATTTCCTTGTTAGCAGCATCAGGGACATGGGCAAGGGTGACATCTTCTaGCTAAGAGCAGGAAATCCC | + |
|
Preference number: 4 (lower is better) Translates to: SPRMYGCNFLVSSIRDMGKGDIF*LRAGNP Trigger: GGGATTTCCTGCTCTTAGCCAGAAGATGTCACCCTT...GCCCATGTCCCTGATGCTGCTAACAAGGAAATTGCAGCCATACATCCGGGGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085215.11 |
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| 3UTR CAA 72 bp | AAAGAAGGGACTGGTGGTAGCACTACTTGTCTCATATaGAGGGAATGTCTGCTGCTTGGCCAGGCTTGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: KEGTGGSTTCLI*RECLLLGQAWR Trigger: TCGCCAAGCCTGGCCAAGCAGCAGACATTCCCTCAATATGAGACAAGTAGTGCTACCACCAGTCCCTTCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 |
||
| CDS-3UTR TCA 90 bp | ACAGGCATTGCTACGTGTGCTAGAGCAGTATTGGCTGGCTTAGCAGTAAGCACAACAGCCATGAAACAATaGCAGATCCATCGCCGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: TGIATCARAVLAGLAVSTTAMKQ*QIHRRV Trigger: CACTCGGCGATGGATCTGTCATTGTTTCATGGCTGT...TGTGCTTACTGCTAAGCCAGCCAATACTGCTCTAGCACACGTAGCAATGCCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085215.11 |
||
| CDS-3UTR GCA 90 bp | CTGGAAAGCAAACAAAGTCCCCTTTGCTCCTTTGCCCTCCACCCCCTGCTCTTGGCATCTTCACAGATGTaGATTCCTCTTGACTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: LESKQSPLCSFALHPLLLASSQM*IPLDSS Trigger: TGATGAGTCAAGAGGAATGCACATCTGTGAAGATGC...CAAGAGCAGGGGGTGGAGGGCAAAGGAGCAAAGGGGACTTTGTTTGCTTTCCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 ENSMUST00000117217.8 |
||
| CDS-3UTR CCA 90 bp | GTCACTGGAGAAAGGGTTGGTAGGAGAAGGATTTGTACGCTGCTTGGACTTGCTTGGACGGCTGGCCTCTaGGACATAAACGTCTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VTGERVGRRRICTLLGLAWTAGL*DINVFL Trigger: AAGAAAGACGTTTATGTCCCAGAGGCCAGCCGTCCA...AGCAAGTCCAAGCAGCGTACAAATCCTTCTCCTACCAACCCTTTCTCCAGTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 |
||
| CDS-3UTR CCA 90 bp | ATTGCTAAGACAGCCCAGGACTGGGAGGAACGGGTGACTGGCCTGAAAAATAAACGGCGTGGGATAGCATaGGGATTGTTCATCTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: IAKTAQDWEERVTGLKNKRRGIA*GLFISE Trigger: TTCAGAGATGAACAATCCCCATGCTATCCCACGCCG...TTTATTTTTCAGGCCAGTCACCCGTTCCTCCCAGTCCTGGGCTGTCTTAGCAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000117217.8 |
||
| 3UTR CAA 72 bp | ACTTCTGCATGCCTGTTTCCTGAGGCTAGCCCACCATaGTCTACACCATTGAAAGCTGCAGAACCATTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TSACLFPEASPP*STPLKAAEPLR Trigger: CCTCAATGGTTCTGCAGCTTTCAATGGTGTAGACAATGGTGGGCTAGCCTCAGGAAACAGGCATGCAGAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 |
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| 3UTR CAA 72 bp | GTGTTGCCAGGAGCCACTGATGGACCAACAACTGTCTaGTCTGTCTCAGCTTTCTTGGCATCTTGCAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: VLPGATDGPTTV*SVSAFLASCNC Trigger: ACAGTTGCAAGATGCCAAGAAAGCTGAGACAGACAAGACAGTTGTTGGTCCATCAGTGGCTCCTGGCAACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110298.9 |
||
| 3UTR CAA 72 bp | AAATCGGTCTTCCTCTGCATAGTGGAAGGCAACTCATaGATGCGTAGGGACAGCTGGCGTTTAAAGGGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: KSVFLCIVEGNS*MRRDSWRLKGD Trigger: GTCACCCTTTAAACGCCAGCTGTCCCTACGCATCAATGAGTTGCCTTCCACTATGCAGAGGAAGACCGATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110298.9 |
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| CDS-3UTR TCA 90 bp | TTTGTTAGGGTCAGAGGGGCCAGAAGGCCAGGTTTCCTTGGCTTCTCTAGCCTAATGATCCTTCTCTTGTaGAAGTGGTTCTACTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: FVRVRGARRPGFLGFSSLMILLL*KWFYWH Trigger: ATGCCAGTAGAACCACTTTCACAAGAGAAGGATCAT...TAGGCTAGAGAAGCCAAGGAAACCTGGCCTTCTGGCCCCTCTGACCCTAACAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000117217.8 |
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| CDS-3UTR TCA 90 bp | GACTGGGAGGAACGGGTGACTGGCCTGAAAAATAAAGGGAGATTGTTTTGCTTCGAACCATTGAGGTGCTaGGCAGGAGGCTTAAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: DWEERVTGLKNKGRLFCFEPLRC*AGGLKK Trigger: CTTCTTTAAGCCTCCTGCTCAGCACCTCAATGGTTC...GAAGCAAAACAATCTCCCTTTATTTTTCAGGCCAGTCACCCGTTCCTCCCAGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117217.8 |
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| CDS-3UTR TCA 90 bp | AGACACACACAGCACAGAAGCCAGAATCTCATCCCTGTAAAACTTATGGGAACATCTAGTGCGGCCCACTaGGCTTCGAAAGGATCCACT | + |
|
Preference number: 4 (lower is better) Translates to: RHTQHRSQNLIPVKLMGTSSAAH*ASKGST Trigger: AGTGGATCCTTTCGAAGCTCAGTGGGCCGCACTAGA...TGTTCCCATAAGTTTTACAGGGATGAGATTCTGGCTTCTGTGCTGTGTGTGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117217.8 |
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| CDS-3UTR GCA 90 bp | CAGAAGCCAGAATCTCATCCCTGTAAAACTTATGGGAACAAAACTTCAAGGACATCCTTGGAAAGGAGGTaGTGGAGGGGCAATGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: QKPESHPCKTYGNKTSRTSLERR*WRGNGG Trigger: GCCGCCATTGCCCCTCCAGCACCTCCTTTCCAAGGA...TGTCCTTGAAGTTTTGTTCCCATAAGTTTTACAGGGATGAGATTCTGGCTTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000117217.8 |
||
| CDS-3UTR CCA 90 bp | ACAGGCATTGCTACGTGTGCTAGAGCAGTATTGGCTGGCTTAGCAGTAAGCACAGCCGAGGTACTTAACTaGGAAGCTACACTTTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: TGIATCARAVLAGLAVSTAEVLN*EATLSS Trigger: ACTGGAAAGTGTAGCTTCCCAGTTAAGTACCTCGGC...TGTGCTTACTGCTAAGCCAGCCAATACTGCTCTAGCACACGTAGCAATGCCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 |
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| CDS-3UTR CCA 90 bp | CATAGCCTGCCTGGCTTCACCCAGCCACACTGTCCCCATCGAGCGATTGCTAAGACTTTTTCTATTGTCTaGTCAACTATGAGGTCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: HSLPGFTQPHCPHRAIAKTFSIV*STMRSL Trigger: TAAGGACCTCATAGTTGACCAGACAATAGAAAAAGT...CTTAGCAATCGCTCGATGGGGACAGTGTGGCTGGGTGAAGCCAGGCAGGCTATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000117217.8 |
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| CDS-3UTR CCA 90 bp | GCTTTGAATACAGATTCCTCTTCAGATCTTCTGCCTCTCTGCTGCCAGAGATTTGGAATGTCTGCTGCTTaGCCAGGCTTGGCGACTGAT | + |
|
Preference number: 4 (lower is better) Translates to: ALNTDSSSDLLPLCCQRFGMSAA*PGLATD Trigger: ATCAGTCGCCAAGCCTGGCCAAGCAGCAGACATTCC...AAATCTCTGGCAGCAGAGAGGCAGAAGATCTGAAGAGGAATCTGTATTCAAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117217.8 |
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| CDS-3UTR TCA 90 bp | TATTCCAGTAAATGTGCTTTGAATACAGATTCCTCTTCAGATCTTCTGCCTCTCTCTCGTCCACAACTCTaGGCCCATCCGCTGACACCC | + |
|
Preference number: 4 (lower is better) Translates to: YSSKCALNTDSSSDLLPLSRPQL*AHPLTP Trigger: GGGTGTCAGCGGATGGGCTCAGAGTTGTGGACGAGA...GAGAGGCAGAAGATCTGAAGAGGAATCTGTATTCAAAGCACATTTACTGGAATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000117217.8 |
||
| CDS-3UTR TCA 90 bp | TATTCCAGTAAATGTGCTTTGAATACAGATTCCTCTTCAGATCTTCTGCCTCTCGAGGGAGTGCGTCTGTaGCCAGCCTGGAAGAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: YSSKCALNTDSSSDLLPLEGVRL*PAWKRP Trigger: AGGTCTCTTCCAGGCTGGTCACAGACGCACTCCCTC...GAGAGGCAGAAGATCTGAAGAGGAATCTGTATTCAAAGCACATTTACTGGAATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117217.8 |
||
| CDS-3UTR CCA 90 bp | GACTGGGAGGAACGGGTGACTGGCCTGAAAAATAAAGGGAGATTGTTTTGCTTCGCCGAGGTACTTAACTaGGAAGCTACACTTTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: DWEERVTGLKNKGRLFCFAEVLN*EATLSS Trigger: ACTGGAAAGTGTAGCTTCCCAGTTAAGTACCTCGGC...GAAGCAAAACAATCTCCCTTTATTTTTCAGGCCAGTCACCCGTTCCTCCCAGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 ENSMUST00000117217.8 |
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| CDS-3UTR CCA 90 bp | CAGAAGCCAGAATCTCATCCCTGTAAAACTTATGGGAACAAAACTTCAAGGACAAGAGGTGGGAGAGGATaGGGATGGAGCAGTGTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: QKPESHPCKTYGNKTSRTRGGRG*GWSSVA Trigger: GGCAACACTGCTCCATCCCCATCCTCTCCCACCTCT...TGTCCTTGAAGTTTTGTTCCCATAAGTTTTACAGGGATGAGATTCTGGCTTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000117217.8 |
||
| CDS-3UTR CCA 90 bp | AGACACACACAGCACAGAAGCCAGAATCTCATCCCTGTAAAACTTATGGGAACAAGCAAGCTGTTCAATTaGTGCATGCCGGCGTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: RHTQHRSQNLIPVKLMGTSKLFN*CMPAWD Trigger: ATCCCACGCCGGCATGCACCAATTGAACAGCTTGCT...TGTTCCCATAAGTTTTACAGGGATGAGATTCTGGCTTCTGTGCTGTGTGTGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000117217.8 |
||
| CDS-3UTR CCA 90 bp | ACCTCTGGGATTAGTGAAAAGTGTGCTGATCTGGAAAGCAAACAAAGTCCCCTTTGCCACCAATGTCACTaGTTTGGTCATTGGGGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: TSGISEKCADLESKQSPLCHQCH*FGHWGG Trigger: TCCGCCCCAATGACCAAACCAGTGACATTGGTGGCA...AAGGGGACTTTGTTTGCTTTCCAGATCAGCACACTTTTCACTAATCCCAGAGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000117217.8 |
||
| CDS-3UTR TCA 90 bp | TATTCCAGTAAATGTGCTTTGAATACAGATTCCTCTTCAGATCTTCTGCCTCTCTCATCTGTCTGCCACTaGTGTGGACGGCTGGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: YSSKCALNTDSSSDLLPLSSVCH*CGRLAS Trigger: AGAGGCCAGCCGTCCACATCAGTGGCAGACAGATGA...GAGAGGCAGAAGATCTGAAGAGGAATCTGTATTCAAAGCACATTTACTGGAATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 ENSMUST00000117217.8 |
||
| CDS-3UTR TCA 90 bp | GCTTTGAATACAGATTCCTCTTCAGATCTTCTGCCTCTCTGCTGCCAGAGATTTACAGCCATGAAACAATaGCAGATCCATCGCCGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: ALNTDSSSDLLPLCCQRFTAMKQ*QIHRRV Trigger: CACTCGGCGATGGATCTGTCATTGTTTCATGGCTGT...AAATCTCTGGCAGCAGAGAGGCAGAAGATCTGAAGAGGAATCTGTATTCAAAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000117217.8 |
||
| CDS-3UTR TCA 90 bp | CCCTGTAAAACTTATGGGAACAAAACTTCAAGGACAGAGCCCATTAAGACCCACCTGGCGTTTAAAGGGTaGCATCTTCTGGCTAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PCKTYGNKTSRTEPIKTHLAFKG*HLLAKS Trigger: GCTCTTAGCCAGAAGATGTCACCCTTTAAACGCCAG...GTGGGTCTTAATGGGCTCTGTCCTTGAAGTTTTGTTCCCATAAGTTTTACAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000117217.8 |
||
| CDS-3UTR TCA 90 bp | TATTCTGTAACTCAAAATGGAAGCTCAGCTTTATCCCCAGACTACAGCTCTACTTGGAAGGCAACTCATTaGTGCGTAGGGACAGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: YSVTQNGSSALSPDYSSTWKATH*CVGTAG Trigger: GCCAGCTGTCCCTACGCATCAATGAGTTGCCTTCCA...AGTAGAGCTGTAGTCTGGGGATAAAGCTGAGCTTCCATTTTGAGTTACAGAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000117217.8 |
||
| CDS-3UTR GCA 90 bp | CCAGAATCTCATCCCTGTAAAACTTATGGGAACAAAACTTCAAGGACAGAGCCCTCCTCTCTTTCGGCTTaGTCAGTGGCAGTTGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: PESHPCKTYGNKTSRTEPSSLSA*SVAVVT Trigger: TGTCACAACTGCCACTGAGCAAGCCGAAAGAGAGGA...GGGCTCTGTCCTTGAAGTTTTGTTCCCATAAGTTTTACAGGGATGAGATTCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000117217.8 |
||
| CDS-3UTR GCA 90 bp | AGACACACACAGCACAGAAGCCAGAATCTCATCCCTGTAAAACTTATGGGAACACACAGGAGACTGTGGTaGCACCAATGTCACTGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: RHTQHRSQNLIPVKLMGTHRRLW*HQCHWF Trigger: AAACCAGTGACATTGGTGGCACCACAGTCTCCTGTG...TGTTCCCATAAGTTTTACAGGGATGAGATTCTGGCTTCTGTGCTGTGTGTGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117217.8 |
||
| CDS-3UTR GCA 90 bp | CAGAAGCCAGAATCTCATCCCTGTAAAACTTATGGGAACAAAACTTCAAGGACAGAGGGTGGCCTGCAGTaGCAAACACATTGGCTACCA | + |
|
Preference number: 4 (lower is better) Translates to: QKPESHPCKTYGNKTSRTEGGLQ*QTHWLP Trigger: TGGTAGCCAATGTGTTTGGCACTGCAGGCCACCCTC...TGTCCTTGAAGTTTTGTTCCCATAAGTTTTACAGGGATGAGATTCTGGCTTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117217.8 |
||
| CDS-3UTR CCA 90 bp | AGACACACACAGCACAGAAGCCAGAATCTCATCCCTGTAAAACTTATGGGAACATGGACGGCTGGCCTCTaGGACATAAACGTCTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RHTQHRSQNLIPVKLMGTWTAGL*DINVFL Trigger: AAGAAAGACGTTTATGTCCCAGAGGCCAGCCGTCCA...TGTTCCCATAAGTTTTACAGGGATGAGATTCTGGCTTCTGTGCTGTGTGTGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 ENSMUST00000117217.8 |
||
| CDS-3UTR CCA 90 bp | ACCTCTGGGATTAGTGAAAAGTGTGCTGATCTGGAAAGCAAACAAAGTCCCCTTATGCGTAGGGACAGCTaGCGTTTAAAGGGTGACATC | + |
|
Preference number: 4 (lower is better) Translates to: TSGISEKCADLESKQSPLMRRDS*RLKGDI Trigger: GATGTCACCCTTTAAACGCCAGCTGTCCCTACGCAT...AAGGGGACTTTGTTTGCTTTCCAGATCAGCACACTTTTCACTAATCCCAGAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000117217.8 |
||
| CDS-3UTR TCA 90 bp | TATTCTGTAACTCAAAATGGAAGCTCAGCTTTATCCCCAGACTACAGCTCTACTGTTGCCAGGAGCCACTaGTGGACCAACAACTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: YSVTQNGSSALSPDYSSTVARSH*WTNNCL Trigger: AAGACAGTTGTTGGTCCATCAGTGGCTCCTGGCAAC...AGTAGAGCTGTAGTCTGGGGATAAAGCTGAGCTTCCATTTTGAGTTACAGAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000117217.8 |
||
| CDS-3UTR GCA 90 bp | GACTGGGAGGAACGGGTGACTGGCCTGAAAAATAAAGGGAGATTGTTTTGCTTCGCTTTCTTGGCATCTTaGAACTGTTTCATGATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: DWEERVTGLKNKGRLFCFAFLAS*NCFMIS Trigger: GGAGATCATGAAACAGTTGCAAGATGCCAAGAAAGC...GAAGCAAAACAATCTCCCTTTATTTTTCAGGCCAGTCACCCGTTCCTCCCAGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000117217.8 |
||
| CDS-3UTR CCA 90 bp | TATTCTGTAACTCAAAATGGAAGCTCAGCTTTATCCCCAGACTACAGCTCTACTACTGATGTGGACGGCTaGCCTCTGGGACATAAACGT | + |
|
Preference number: 4 (lower is better) Translates to: YSVTQNGSSALSPDYSSTTDVDG*PLGHKR Trigger: ACGTTTATGTCCCAGAGGCCAGCCGTCCACATCAGT...AGTAGAGCTGTAGTCTGGGGATAAAGCTGAGCTTCCATTTTGAGTTACAGAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 ENSMUST00000117217.8 |
||
| CDS-3UTR CCA 90 bp | GCTTTGAATACAGATTCCTCTTCAGATCTTCTGCCTCTCTGCTGCCAGAGATTTAAGGGTGACATCTTCTaGCTAAGAGCAGGAAATCCC | + |
|
Preference number: 4 (lower is better) Translates to: ALNTDSSSDLLPLCCQRFKGDIF*LRAGNP Trigger: GGGATTTCCTGCTCTTAGCCAGAAGATGTCACCCTT...AAATCTCTGGCAGCAGAGAGGCAGAAGATCTGAAGAGGAATCTGTATTCAAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000117217.8 |
||
| CDS-3UTR TCA 90 bp | ATGTACAATTTCTTACATCTAACCCGCTCACTTTTGGCAAGATTACTTACAACTTCATCTGTCTGCCACTaGTGTGGACGGCTGGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: MYNFLHLTRSLLARLLTTSSVCH*CGRLAS Trigger: AGAGGCCAGCCGTCCACATCAGTGGCAGACAGATGA...AGTTGTAAGTAATCTTGCCAAAAGTGAGCGGGTTAGATGTAAGAAATTGTACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 ENSMUST00000117217.8 |
||
| CDS-3UTR GCA 90 bp | GACATATGTAAGAAAAGGCTCTGTCAAAGTTCCTATCTGGGGCACAGAAGGAAAAGCTACACTTTCCAGTaGGGACTCCTTCTTCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: DICKKRLCQSSYLGHRRKSYTFQ*GLLLHL Trigger: CAGATGAAGAAGGAGTCCGCACTGGAAAGTGTAGCT...TTTCCTTCTGTGCCCCAGATAGGAACTTTGACAGAGCCTTTTCTTACATATGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000110298.9 |
||
| CDS-3UTR GCA 90 bp | CAGAAGCCAGAATCTCATCCCTGTAAAACTTATGGGAACAAAACTTCAAGGACATCCTCTCTTTCGGCTTaGTCAGTGGCAGTTGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: QKPESHPCKTYGNKTSRTSSLSA*SVAVVT Trigger: TGTCACAACTGCCACTGAGCAAGCCGAAAGAGAGGA...TGTCCTTGAAGTTTTGTTCCCATAAGTTTTACAGGGATGAGATTCTGGCTTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000117217.8 |
||
| CDS-3UTR GCA 90 bp | GCTTTGAATACAGATTCCTCTTCAGATCTTCTGCCTCTCTGCTGCCAGAGATTTTACACCATTGAAAGCTaGAGAACCATTGAGGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ALNTDSSSDLLPLCCQRFYTIES*RTIEVL Trigger: CAGCACCTCAATGGTTCTGCAGCTTTCAATGGTGTA...AAATCTCTGGCAGCAGAGAGGCAGAAGATCTGAAGAGGAATCTGTATTCAAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117217.8 |
||
| CDS-3UTR CCA 90 bp | ATGACATTAGAATTTCACCATAGGTTTAAAACCAGGACAACACTGCTTGCTCATTGGTGCATGCCGGCGTaGGATAGCATGGGGATTGTT | + |
|
Preference number: 4 (lower is better) Translates to: MTLEFHHRFKTRTTLLAHWCMPA*DSMGIV Trigger: AACAATCCCCATGCTATCCCACGCCGGCATGCACCA...ATGAGCAAGCAGTGTTGTCCTGGTTTTAAACCTATGGTGAAATTCTAATGTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000117217.8 |
||
| CDS-3UTR CCA 90 bp | CAATTTCTTACATCTAACCCGCTCACTTTTGGCAAGATTACTTACAACTCATACAGGAAGGCATGTCCTTaGAAAGGAGGTGCTGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: QFLTSNPLTFGKITYNSYRKACP*KGGAGG Trigger: CCCTCCAGCACCTCCTTTCCAAGGACATGCCTTCCT...GTATGAGTTGTAAGTAATCTTGCCAAAAGTGAGCGGGTTAGATGTAAGAAATTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117217.8 |
||
| CDS-3UTR GCA 90 bp | TATTCTGTAACTCAAAATGGAAGCTCAGCTTTATCCCCAGACTACAGCTCTACTAGCTACACTTTCCAGTaGGGACTCCTTCTTCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: YSVTQNGSSALSPDYSSTSYTFQ*GLLLHL Trigger: CAGATGAAGAAGGAGTCCGCACTGGAAAGTGTAGCT...AGTAGAGCTGTAGTCTGGGGATAAAGCTGAGCTTCCATTTTGAGTTACAGAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 ENSMUST00000117217.8 |
||
| CDS-3UTR CCA 90 bp | CAGAAGCCAGAATCTCATCCCTGTAAAACTTATGGGAACAAAACTTCAAGGACATCATCAACTTCTACGTaGCCGAGGTACTTAACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: QKPESHPCKTYGNKTSRTSSTST*PRYLTG Trigger: CCCAGTTAAGTACCTCGGCCACGTAGAAGTTGATGA...TGTCCTTGAAGTTTTGTTCCCATAAGTTTTACAGGGATGAGATTCTGGCTTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 ENSMUST00000117217.8 |
||
| CDS-3UTR CCA 90 bp | AGACACACACAGCACAGAAGCCAGAATCTCATCCCTGTAAAACTTATGGGAACAGTCAAAGTTCCTATCTaGGGCACAGAAGGAAACTTT | + |
|
Preference number: 4 (lower is better) Translates to: RHTQHRSQNLIPVKLMGTVKVPI*GTEGNF Trigger: AAAGTTTCCTTCTGTGCCCCAGATAGGAACTTTGAC...TGTTCCCATAAGTTTTACAGGGATGAGATTCTGGCTTCTGTGCTGTGTGTGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000117217.8 |
||
| CDS-3UTR CCA 90 bp | AGACACACACAGCACAGAAGCCAGAATCTCATCCCTGTAAAACTTATGGGAACACTGTCTCAGCTTTCTTaGCATCTTGCAACTGTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RHTQHRSQNLIPVKLMGTLSQLS*HLATVS Trigger: TGAAACAGTTGCAAGATGCCAAGAAAGCTGAGACAG...TGTTCCCATAAGTTTTACAGGGATGAGATTCTGGCTTCTGTGCTGTGTGTGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000117217.8 |
||
| CDS-3UTR TCA 90 bp | ATGTACAATTTCTTACATCTAACCCGCTCACTTTTGGCAAGATTACTTACAACTGGGATTGTTCATCTCTaGAGATGCAGTGCCATCCGG | + |
|
Preference number: 4 (lower is better) Translates to: MYNFLHLTRSLLARLLTTGIVHL*RCSAIR Trigger: CCGGATGGCACTGCATCTTCAGAGATGAACAATCCC...AGTTGTAAGTAATCTTGCCAAAAGTGAGCGGGTTAGATGTAAGAAATTGTACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000117217.8 |
||
| CDS-3UTR TCA 90 bp | ATGACATTAGAATTTCACCATAGGTTTAAAACCAGGACAACACTGCTTGCTCATCTGGCGTTTAAAGGGTaGCATCTTCTGGCTAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: MTLEFHHRFKTRTTLLAHLAFKG*HLLAKS Trigger: GCTCTTAGCCAGAAGATGTCACCCTTTAAACGCCAG...ATGAGCAAGCAGTGTTGTCCTGGTTTTAAACCTATGGTGAAATTCTAATGTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000117217.8 |
||
| CDS-3UTR CCA 90 bp | ATGTACAATTTCTTACATCTAACCCGCTCACTTTTGGCAAGATTACTTACAACTACATTGGCTACCATCTaGGATGGGGTGATGCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: MYNFLHLTRSLLARLLTTTLATI*DGVMPT Trigger: AGTGGGCATCACCCCATCCCAGATGGTAGCCAATGT...AGTTGTAAGTAATCTTGCCAAAAGTGAGCGGGTTAGATGTAAGAAATTGTACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117217.8 |
||
| CDS-3UTR CCA 90 bp | ATGTACAATTTCTTACATCTAACCCGCTCACTTTTGGCAAGATTACTTACAACTATGCGTAGGGACAGCTaGCGTTTAAAGGGTGACATC | + |
|
Preference number: 4 (lower is better) Translates to: MYNFLHLTRSLLARLLTTMRRDS*RLKGDI Trigger: GATGTCACCCTTTAAACGCCAGCTGTCCCTACGCAT...AGTTGTAAGTAATCTTGCCAAAAGTGAGCGGGTTAGATGTAAGAAATTGTACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000117217.8 |
||
| CDS-3UTR TCA 90 bp | ATGACATTAGAATTTCACCATAGGTTTAAAACCAGGACAACACTGCTTGCTCATATGATCCTTCTCTTGTaGAAGTGGTTCTACTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: MTLEFHHRFKTRTTLLAHMILLL*KWFYWH Trigger: ATGCCAGTAGAACCACTTTCACAAGAGAAGGATCAT...ATGAGCAAGCAGTGTTGTCCTGGTTTTAAACCTATGGTGAAATTCTAATGTCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000117217.8 |
||
| CDS-3UTR TCA 90 bp | ATGACATTAGAATTTCACCATAGGTTTAAAACCAGGACAACACTGCTTGCTCATAGTTGTGACACGGAATaGTCCTTCTCTTGTGAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: MTLEFHHRFKTRTTLLAHSCDTE*SFSCES Trigger: ACTTTCACAAGAGAAGGATCATTCCGTGTCACAACT...ATGAGCAAGCAGTGTTGTCCTGGTTTTAAACCTATGGTGAAATTCTAATGTCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000117217.8 |
||
| CDS-3UTR GCA 90 bp | ATGACATTAGAATTTCACCATAGGTTTAAAACCAGGACAACACTGCTTGCTCATGCTTTCTTGGCATCTTaGAACTGTTTCATGATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: MTLEFHHRFKTRTTLLAHAFLAS*NCFMIS Trigger: GGAGATCATGAAACAGTTGCAAGATGCCAAGAAAGC...ATGAGCAAGCAGTGTTGTCCTGGTTTTAAACCTATGGTGAAATTCTAATGTCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000117217.8 |
||
| CDS-3UTR CCA 90 bp | ATGACATTAGAATTTCACCATAGGTTTAAAACCAGGACAACACTGCTTGCTCATGTCAAAGTTCCTATCTaGGGCACAGAAGGAAACTTT | + |
|
Preference number: 4 (lower is better) Translates to: MTLEFHHRFKTRTTLLAHVKVPI*GTEGNF Trigger: AAAGTTTCCTTCTGTGCCCCAGATAGGAACTTTGAC...ATGAGCAAGCAGTGTTGTCCTGGTTTTAAACCTATGGTGAAATTCTAATGTCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000117217.8 |
||
| 3UTR CAA 72 bp | GCTTCCTGTTATGTTTTATATTCCAGTAAATGTGCTTaGAATACAGATTCCTCTTCAGATCTTCTGCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: ASCYVLYSSKCA*NTDSSSDLLPL Trigger: GAGAGGCAGAAGATCTGAAGAGGAATCTGTATTCAAAGCACATTTACTGGAATATAAAACATAACAGGAAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 ENSMUST00000117217.8 |
||
| CDS-3UTR CAA 90 bp | CAGCATAGCCTGCCTGGCTTCACCCAGCCACACTGTCCCCATCGAGCGATTGCTGGGGATGGAGCAGTGTaGCCAGGAGCCACTGATGGA | + |
|
Preference number: 5 (lower is better) Translates to: QHSLPGFTQPHCPHRAIAGDGAV*PGATDG Trigger: TCCATCAGTGGCTCCTGGCAACACTGCTCCATCCCC...AGCAATCGCTCGATGGGGACAGTGTGGCTGGGTGAAGCCAGGCAGGCTATGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000117217.8 |
||
| CDS-3UTR CAA 90 bp | GGAAGGCATGTCCTTGGAAAGGAGGTGCTGGAGGGGCAATGGCGGCGGGCGGAGTCCCCGGAAAGAGCCTaGACGAGCAAGCTGTTCAAT | + |
|
Preference number: 5 (lower is better) Translates to: GRHVLGKEVLEGQWRRAESPERA*TSKLFN Trigger: ATTGAACAGCTTGCTCGTCAAGGCTCTTTCCGGGGA...CTCCGCCCGCCGCCATTGCCCCTCCAGCACCTCCTTTCCAAGGACATGCCTTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085215.11 |
||
| CDS-3UTR CAA 90 bp | CAGCATAGCCTGCCTGGCTTCACCCAGCCACACTGTCCCCATCGAGCGATTGCTTCACTGGTTTGGTCATaGGGGCGGAGGAGAAGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: QHSLPGFTQPHCPHRAIASLVWS*GRRRRG Trigger: ACCCCTTCTCCTCCGCCCCAATGACCAAACCAGTGA...AGCAATCGCTCGATGGGGACAGTGTGGCTGGGTGAAGCCAGGCAGGCTATGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000117217.8 |
||
| CDS-3UTR CAA 90 bp | CAGCATAGCCTGCCTGGCTTCACCCAGCCACACTGTCCCCATCGAGCGATTGCTACTGATGTGGATGAGTaGTCTGAGGGTGGCCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: QHSLPGFTQPHCPHRAIATDVDE*SEGGLQ Trigger: CTGCAGGCCACCCTCAGACAACTCATCCACATCAGT...AGCAATCGCTCGATGGGGACAGTGTGGCTGGGTGAAGCCAGGCAGGCTATGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117217.8 |
||
| CDS-3UTR CAA 90 bp | CATAGCCTGCCTGGCTTCACCCAGCCACACTGTCCCCATCGAGCGATTGCTAAGGTACGCTGCTTGGACTaGCTTTCTAGTGCGGCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: HSLPGFTQPHCPHRAIAKVRCLD*LSSAAH Trigger: GTGGGCCGCACTAGAAAGCAAGTCCAAGCAGCGTAC...CTTAGCAATCGCTCGATGGGGACAGTGTGGCTGGGTGAAGCCAGGCAGGCTATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117217.8 |
||
| CDS-3UTR CAA 90 bp | GTGCTGATCTGGAAAGCAAACAAAGTCCCCTTTGCTCCTTTGCCCTCCACCCCCGGGGATGGAGCAGTGTaGCCAGGAGCCACTGATGGA | + |
|
Preference number: 5 (lower is better) Translates to: VLIWKANKVPFAPLPSTPGDGAV*PGATDG Trigger: TCCATCAGTGGCTCCTGGCAACACTGCTCCATCCCC...GGGGGTGGAGGGCAAAGGAGCAAAGGGGACTTTGTTTGCTTTCCAGATCAGCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000117217.8 |
||
| CDS-3UTR CAA 90 bp | GCCAGAAGGCCAGGTTTCCTTGGCTTCTCTAGCCTAGCTGCAGGGCAGTCCTCCGAGGCTAGCCCACCATaGTCTACACCATTGAAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: ARRPGFLGFSSLAAGQSSEASPP*STPLKA Trigger: AGCTTTCAATGGTGTAGACAATGGTGGGCTAGCCTC...GGAGGACTGCCCTGCAGCTAGGCTAGAGAAGCCAAGGAAACCTGGCCTTCTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117217.8 |
||
| CDS-3UTR CAA 90 bp | TCAAGTAGCTGCAACTGGCATGGGATGCTCTGTTCATGGTTGGGGCAGAAGGGGGTGGAAGGCAACTCATaGATGCGTAGGGACAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SSSCNWHGMLCSWLGQKGVEGNS*MRRDSW Trigger: CCAGCTGTCCCTACGCATCAATGAGTTGCCTTCCAC...CCCCTTCTGCCCCAACCATGAACAGAGCATCCCATGCCAGTTGCAGCTACTTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000117217.8 |
||
| CDS-3UTR CAA 90 bp | CCTCTCTGCTGCCAGAGATTTGTTAGGGTCAGAGGGGCCAGAAGGCCAGGTTTCTCTGTCTCAGCTTTCTaGGCATCTTGCAACTGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: PLCCQRFVRVRGARRPGFSVSAF*ASCNCF Trigger: GAAACAGTTGCAAGATGCCAAGAAAGCTGAGACAGA...GAAACCTGGCCTTCTGGCCCCTCTGACCCTAACAAATCTCTGGCAGCAGAGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000117217.8 |
||
| CDS TCA 90 bp | TATGAGGTCCTTAGTTTTCTCGTCCACAACTCTGAGCCCATCCGCTaGCACCCACAGAACGGCCTTCACTGCTTTCTTTCCCGTTTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: YEVLSFLVHNSEPIR*HPQNGLHCFLSRFS Trigger: GGAAAAACGGGAAAGAAAGCAGTGAAGGCCGTTCTGTGGGTGTCAGCGGATGGGCTCAGAGTTGTGGACGAGAAAACTAAGGACCTCATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000021647.14 ENSMUST00000085215.11 ENSMUST00000129335.8 ENSMUST00000135962.8 ENSMUST00000155112.8 |
||
| CDS TCA 90 bp | TATGAGGTCCTTAGTTTTCTCGTCCACAACTCTGAGCCCATCCGCTaGCACCCACAGAACGGCCTTCACTGCTTTCTTTCCCGTAGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: YEVLSFLVHNSEPIR*HPQNGLHCFLSRSF Trigger: AAAGCTACGGGAAAGAAAGCAGTGAAGGCCGTTCTGTGGGTGTCAGCGGATGGGCTCAGAGTTGTGGACGAGAAAACTAAGGACCTCATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117217.8 ENSMUST00000136848.8 ENSMUST00000154043.8 |
||
| CDS-3UTR CAA 90 bp | GCTTCGAAAGGATCCACTGGGCAGGTGCCTGGAGGGACTTCTGCATGCCTGTTTAGCTTTCTTGGCATCTaGCAACTGTTTCATGATCTC | + |
|
Preference number: 5 (lower is better) Translates to: ASKGSTGQVPGGTSACLFSFLGI*QLFHDL Trigger: GAGATCATGAAACAGTTGCAAGATGCCAAGAAAGCT...AAACAGGCATGCAGAAGTCCCTCCAGGCACCTGCCCAGTGGATCCTTTCGAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085215.11 |
||
| CDS-3UTR CAA 90 bp | GACTGGGAGGAACGGGTGACTGGCCTGAAAAATAAAGGGAGATTGTTTTGCTTCACCAATGTCACTGGTTaGGTCATTGGGGCGGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: DWEERVTGLKNKGRLFCFTNVTG*VIGAEE Trigger: CTCCTCCGCCCCAATGACCAAACCAGTGACATTGGT...GAAGCAAAACAATCTCCCTTTATTTTTCAGGCCAGTCACCCGTTCCTCCCAGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000117217.8 |
||
| CDS-3UTR CAA 90 bp | CCTCTCTGCTGCCAGAGATTTGTTAGGGTCAGAGGGGCCAGAAGGCCAGGTTTCACTACTTGTCTCATATaGAGGGAATGTCTGCTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: PLCCQRFVRVRGARRPGFTTCLI*RECLLL Trigger: AAGCAGCAGACATTCCCTCAATATGAGACAAGTAGT...GAAACCTGGCCTTCTGGCCCCTCTGACCCTAACAAATCTCTGGCAGCAGAGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117217.8 |
||
| CDS-3UTR CAA 90 bp | ACACTTCTTCTAACCAGCGGTCAGCTTCAGAGGGAGTGCGTCTGTGACCAGCCTAGATGTGCATTCCTCTaGACTCATCAACTTCTACGT | + |
|
Preference number: 5 (lower is better) Translates to: TLLLTSGQLQRECVCDQPRCAFL*THQLLR Trigger: ACGTAGAAGTTGATGAGTCAAGAGGAATGCACATCT...AGGCTGGTCACAGACGCACTCCCTCTGAAGCTGACCGCTGGTTAGAAGAAGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 |
||
| CDS-3UTR CAA 90 bp | GTGCTGATCTGGAAAGCAAACAAAGTCCCCTTTGCTCCTTTGCCCTCCACCCCCAGCTTTCTTGGCATCTaGCAACTGTTTCATGATCTC | + |
|
Preference number: 5 (lower is better) Translates to: VLIWKANKVPFAPLPSTPSFLGI*QLFHDL Trigger: GAGATCATGAAACAGTTGCAAGATGCCAAGAAAGCT...GGGGGTGGAGGGCAAAGGAGCAAAGGGGACTTTGTTTGCTTTCCAGATCAGCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000117217.8 |
||
| CDS-3UTR CAA 90 bp | TGCAATTTCCTTGTTAGCAGCATCAGGGACATGGGCCCAGGGGTTGGTTTCACGTCTGTCTCAGCTTTCTaGGCATCTTGCAACTGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: CNFLVSSIRDMGPGVGFTSVSAF*ASCNCF Trigger: GAAACAGTTGCAAGATGCCAAGAAAGCTGAGACAGA...CGTGAAACCAACCCCTGGGCCCATGTCCCTGATGCTGCTAACAAGGAAATTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085215.11 |
||
| CDS-3UTR CAA 90 bp | TTTGTTAGGGTCAGAGGGGCCAGAAGGCCAGGTTTCCTTGGCTTCTCTAGCCTAAGATGTGCATTCCTCTaGACTCATCAACTTCTACGT | + |
|
Preference number: 5 (lower is better) Translates to: FVRVRGARRPGFLGFSSLRCAFL*THQLLR Trigger: ACGTAGAAGTTGATGAGTCAAGAGGAATGCACATCT...TAGGCTAGAGAAGCCAAGGAAACCTGGCCTTCTGGCCCCTCTGACCCTAACAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 ENSMUST00000117217.8 |
||
| CDS-3UTR CAA 90 bp | CCAGAATCTCATCCCTGTAAAACTTATGGGAACAAAACTTCAAGGACAGAGCCCCTCCTCTCTTTCGGCTaGCTCAGTGGCAGTTGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: PESHPCKTYGNKTSRTEPLLSFG*LSGSCD Trigger: GTCACAACTGCCACTGAGCAAGCCGAAAGAGAGGAG...GGGCTCTGTCCTTGAAGTTTTGTTCCCATAAGTTTTACAGGGATGAGATTCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000117217.8 |
||
| CDS-3UTR CAA 90 bp | ATGTGGATGAGTTGTCTGAGGGTGGCCTGCAGTGCCAAACACATTGGCTACCATAGATGTGCATTCCTCTaGACTCATCAACTTCTACGT | + |
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Preference number: 5 (lower is better) Translates to: MWMSCLRVACSAKHIGYHRCAFL*THQLLR Trigger: ACGTAGAAGTTGATGAGTCAAGAGGAATGCACATCT...ATGGTAGCCAATGTGTTTGGCACTGCAGGCCACCCTCAGACAACTCATCCACAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000110298.9 |
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| CDS-3UTR CAA 90 bp | TTTGTTAGGGTCAGAGGGGCCAGAAGGCCAGGTTTCCTTGGCTTCTCTAGCCTATTTCCAAAGAAGCCTTaGAAGAACTTCCTTTCAGCT | + |
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Preference number: 5 (lower is better) Translates to: FVRVRGARRPGFLGFSSLFPKKP*KNFLSA Trigger: AGCTGAAAGGAAGTTCTTCAAAGGCTTCTTTGGAAA...TAGGCTAGAGAAGCCAAGGAAACCTGGCCTTCTGGCCCCTCTGACCCTAACAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085215.11 |
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| CDS-3UTR CAA 90 bp | TATTCTGTAACTCAAAATGGAAGCTCAGCTTTATCCCCAGACTACAGCTCTACTGAGCAAGCTGTTCAATaGGTGCATGCCGGCGTGGGA | + |
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Preference number: 5 (lower is better) Translates to: YSVTQNGSSALSPDYSSTEQAVQ*VHAGVG Trigger: TCCCACGCCGGCATGCACCAATTGAACAGCTTGCTC...AGTAGAGCTGTAGTCTGGGGATAAAGCTGAGCTTCCATTTTGAGTTACAGAATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000117217.8 |
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| CDS-3UTR CAA 90 bp | TATTCTGTAACTCAAAATGGAAGCTCAGCTTTATCCCCAGACTACAGCTCTACTGTGGAAGGCAACTCATaGATGCGTAGGGACAGCTGG | + |
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Preference number: 5 (lower is better) Translates to: YSVTQNGSSALSPDYSSTVEGNS*MRRDSW Trigger: CCAGCTGTCCCTACGCATCAATGAGTTGCCTTCCAC...AGTAGAGCTGTAGTCTGGGGATAAAGCTGAGCTTCCATTTTGAGTTACAGAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000117217.8 |
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| CDS-3UTR CAA 90 bp | CAGAAGCCAGAATCTCATCCCTGTAAAACTTATGGGAACAAAACTTCAAGGACAGGGCCCGCACACTCTTaGACACTTCTTCTAACCAGC | + |
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Preference number: 5 (lower is better) Translates to: QKPESHPCKTYGNKTSRTGPAHS*TLLLTS Trigger: GCTGGTTAGAAGAAGTGTCAAAGAGTGTGCGGGCCC...TGTCCTTGAAGTTTTGTTCCCATAAGTTTTACAGGGATGAGATTCTGGCTTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117217.8 |
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| CDS-3UTR CAA 90 bp | CAGAAGCCAGAATCTCATCCCTGTAAAACTTATGGGAACAAAACTTCAAGGACAGCAGTGCCAAACACATaGGCTACCATCTGGGATGGG | + |
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Preference number: 5 (lower is better) Translates to: QKPESHPCKTYGNKTSRTAVPNT*ATIWDG Trigger: CCCATCCCAGATGGTAGCCAATGTGTTTGGCACTGC...TGTCCTTGAAGTTTTGTTCCCATAAGTTTTACAGGGATGAGATTCTGGCTTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117217.8 |
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| CDS-3UTR CAA 90 bp | GACTGGGAGGAACGGGTGACTGGCCTGAAAAATAAAGGGAGATTGTTTTGCTTCTCACTGGAGAAAGGGTaGGTAGGAGAAGGATTTGTA | + |
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Preference number: 5 (lower is better) Translates to: DWEERVTGLKNKGRLFCFSLEKG*VGEGFV Trigger: TACAAATCCTTCTCCTACCAACCCTTTCTCCAGTGA...GAAGCAAAACAATCTCCCTTTATTTTTCAGGCCAGTCACCCGTTCCTCCCAGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117217.8 |
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| CDS-3UTR CAA 90 bp | CAATTTCTTACATCTAACCCGCTCACTTTTGGCAAGATTACTTACAACTCATACGAGGAAGGCATGTCCTaGGAAAGGAGGTGCTGGAGG | + |
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Preference number: 5 (lower is better) Translates to: QFLTSNPLTFGKITYNSYEEGMS*ERRCWR Trigger: CCTCCAGCACCTCCTTTCCAAGGACATGCCTTCCTC...GTATGAGTTGTAAGTAATCTTGCCAAAAGTGAGCGGGTTAGATGTAAGAAATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117217.8 |
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| CDS-3UTR CAA 90 bp | CAATTTCTTACATCTAACCCGCTCACTTTTGGCAAGATTACTTACAACTCATACTCCCCGGAAAGAGCCTaGACGAGCAAGCTGTTCAAT | + |
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Preference number: 5 (lower is better) Translates to: QFLTSNPLTFGKITYNSYSPERA*TSKLFN Trigger: ATTGAACAGCTTGCTCGTCAAGGCTCTTTCCGGGGA...GTATGAGTTGTAAGTAATCTTGCCAAAAGTGAGCGGGTTAGATGTAAGAAATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085215.11 ENSMUST00000117217.8 |
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| CDS CCA 90 bp | GCCATCACGACATATGTAAGAAAAGGCTCTGTCAAAGTTCCTATCTaGGGCACAGAAGGAAACTTTTTCTATTGTCTGGTCAACTATGAG | + |
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Preference number: 5 (lower is better) Translates to: AITTYVRKGSVKVPI*GTEGNFFYCLVNYE Trigger: CTCATAGTTGACCAGACAATAGAAAAAGTTTCCTTCTGTGCCCCAGATAGGAACTTTGACAGAGCCTTTTCTTACATATGTCGTGATGGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000021647.14 ENSMUST00000085215.11 ENSMUST00000117217.8 ENSMUST00000129335.8 ENSMUST00000135962.8 ENSMUST00000154043.8 ENSMUST00000155112.8 |
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| CDS CAA 90 bp | GTCCCTTGTAACACAGGAGACTGTGGTGCCACCAATGTCACTGGTTaGGTCATTGGGGCGGAGGAGAAGGGGTCCTCAGAGGGCGTGCTG | + |
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Preference number: 6 (lower is better) Translates to: VPCNTGDCGATNVTG*VIGAEEKGSSEGVL Trigger: CAGCACGCCCTCTGAGGACCCCTTCTCCTCCGCCCCAATGACCAAACCAGTGACATTGGTGGCACCACAGTCTCCTGTGTTACAAGGGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021647.14 ENSMUST00000117217.8 |
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| CDS TCA 72 bp | CTTAGTTTTCTCGTCCACAACTCTGAGCCCATCCGCTaGCACCCACAGAACGGCCTTCACTGCTTTCTTTCC | + |
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Preference number: 6 (lower is better) Translates to: LSFLVHNSEPIR*HPQNGLHCFLS Trigger: GGAAAGAAAGCAGTGAAGGCCGTTCTGTGGGTGTCAGCGGATGGGCTCAGAGTTGTGGACGAGAAAACTAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000021647.14 ENSMUST00000085215.11 ENSMUST00000117217.8 ENSMUST00000129335.8 ENSMUST00000135962.8 ENSMUST00000136848.8 ENSMUST00000154043.8 ENSMUST00000155112.8 |
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| CDS CCA 72 bp | TTCATCTGTCTGCCACTGATGTGGACGGCTGGCCTCTaGGACATAAACGTCTTTCTTTCTCCTGAAGCTTTG | + |
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Preference number: 6 (lower is better) Translates to: FICLPLMWTAGL*DINVFLSPEAL Trigger: CAAAGCTTCAGGAGAAAGAAAGACGTTTATGTCCCAGAGGCCAGCCGTCCACATCAGTGGCAGACAGATGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENSMUST00000021647.14 ENSMUST00000085215.11 ENSMUST00000110298.9 ENSMUST00000117217.8 ENSMUST00000126943.2 ENSMUST00000129335.8 ENSMUST00000135962.8 ENSMUST00000136848.8 ENSMUST00000154043.8 ENSMUST00000155112.8 ENSMUST00000222439.2 |
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| CDS CCA 72 bp | CAGATGTGCATTCCTCTTGACTCATCAACTTCTACGTaGCCGAGGTACTTAACTGGGAAGCTACACTTTCCA | + |
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Preference number: 6 (lower is better) Translates to: QMCIPLDSSTST*PRYLTGKLHFP Trigger: TGGAAAGTGTAGCTTCCCAGTTAAGTACCTCGGCCACGTAGAAGTTGATGAGTCAAGAGGAATGCACATCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000021647.14 ENSMUST00000085215.11 ENSMUST00000110298.9 ENSMUST00000117217.8 ENSMUST00000129335.8 ENSMUST00000135962.8 ENSMUST00000136848.8 ENSMUST00000154043.8 ENSMUST00000155112.8 |
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