Pregenerated sensors for NUGGC (Mus musculus)
Ensembl gene IDs: ENSMUSG00000061356Ensembl transcript IDs: ENSMUST00000079469.7, ENSMUST00000150897.8
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GGGGGCCGGCTTTGCTGGGGGACATTCGCAGGAGGAAATCTTGCATaGTCCTCCGCAGCTGTGCGTTCTCAGCAACCTCCCTCAGGCTTC | + |
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Preference number: 5 (lower is better) Translates to: GGRLCWGTFAGGNLA*SSAAVRSQQPPSGF Trigger: GAAGCCTGAGGGAGGTTGCTGAGAACGCACAGCTGCGGAGGAGCATGCAAGATTTCCTCCTGCGAATGTCCCCCAGCAAAGCCGGCCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000079469.7 ENSMUST00000150897.8 |
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| CDS GCA 90 bp | CCATGGGGGCCGGCTTTGCTGGGGGACATTCGCAGGAGGAAATCTTaGATGCTCCTCCGCAGCTGTGCGTTCTCAGCAACCTCCCTCAGG | + |
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Preference number: 5 (lower is better) Translates to: PWGPALLGDIRRRKS*MLLRSCAFSATSLR Trigger: CCTGAGGGAGGTTGCTGAGAACGCACAGCTGCGGAGGAGCATGCAAGATTTCCTCCTGCGAATGTCCCCCAGCAAAGCCGGCCCCCATGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000079469.7 ENSMUST00000150897.8 |
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| CDS CCA 90 bp | TGCTCCTCACCAGGCATGACCCGAGGATGCGGCGGTAGGAAGTCATaGCCACCTGGACCCCTGTCTGCAGGGGCTGTTCCATTCGAGCAA | + |
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Preference number: 5 (lower is better) Translates to: CSSPGMTRGCGGRKS*PPGPLSAGAVPFEQ Trigger: TTGCTCGAATGGAACAGCCCCTGCAGACAGGGGTCCAGGTGGCCATGACTTCCTACCGCCGCATCCTCGGGTCATGCCTGGTGAGGAGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079469.7 ENSMUST00000150897.8 |
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| CDS TCA 90 bp | CAGGGTCTGGTGAAAACCTTGGTTTCCTCTGCTCCTCACCAGGCATaGCCCGAGGATGCGGCGGTAGGAAGTCATGGCCACCTGGACCCC | + |
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Preference number: 5 (lower is better) Translates to: QGLVKTLVSSAPHQA*PEDAAVGSHGHLDP Trigger: GGGGTCCAGGTGGCCATGACTTCCTACCGCCGCATCCTCGGGTCATGCCTGGTGAGGAGCAGAGGAAACCAAGGTTTTCACCAGACCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079469.7 ENSMUST00000150897.8 |
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| CDS GCA 90 bp | GAAAACCTTGGTTTCCTCTGCTCCTCACCAGGCATGACCCGAGGATaGGGCGGTAGGAAGTCATGGCCACCTGGACCCCTGTCTGCAGGG | + |
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Preference number: 5 (lower is better) Translates to: ENLGFLCSSPGMTRG*GGRKSWPPGPLSAG Trigger: CCCTGCAGACAGGGGTCCAGGTGGCCATGACTTCCTACCGCCGCATCCTCGGGTCATGCCTGGTGAGGAGCAGAGGAAACCAAGGTTTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079469.7 ENSMUST00000150897.8 |
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| CDS GCA 90 bp | CTTCTGGGCAGCTTCTTCCGTTGCATCATCCCTGTCCCACAAGTCTaGCTCCTCTTCCCCAGACTGCTCTGCTCTGTGCAGGAGCTTAGT | + |
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Preference number: 5 (lower is better) Translates to: LLGSFFRCIIPVPQV*LLFPRLLCSVQELS Trigger: ACTAAGCTCCTGCACAGAGCAGAGCAGTCTGGGGAAGAGGAGGCAGACTTGTGGGACAGGGATGATGCAACGGAAGAAGCTGCCCAGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079469.7 ENSMUST00000150897.8 |
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| CDS GCA 90 bp | GTTGCATCATCCCTGTCCCACAAGTCTGCCTCCTCTTCCCCAGACTaGTCTGCTCTGTGCAGGAGCTTAGTCAAGTCCTTCAGTTCTGCC | + |
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Preference number: 5 (lower is better) Translates to: VASSLSHKSASSSPD*SALCRSLVKSFSSA Trigger: GGCAGAACTGAAGGACTTGACTAAGCTCCTGCACAGAGCAGAGCAGTCTGGGGAAGAGGAGGCAGACTTGTGGGACAGGGATGATGCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079469.7 ENSMUST00000150897.8 |
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| CDS GCA 90 bp | TCAGGCAAACTGCTTTCAGGGTCTGGTGAAAACCTTGGTTTCCTCTaGTCCTCACCAGGCATGACCCGAGGATGCGGCGGTAGGAAGTCA | + |
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Preference number: 5 (lower is better) Translates to: SGKLLSGSGENLGFL*SSPGMTRGCGGRKS Trigger: TGACTTCCTACCGCCGCATCCTCGGGTCATGCCTGGTGAGGAGCAGAGGAAACCAAGGTTTTCACCAGACCCTGAAAGCAGTTTGCCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079469.7 ENSMUST00000150897.8 |
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| CDS GCA 90 bp | CAGCCACTTCTAACCCCAACTTCTGCCATCCTCTCCTCCAGGGAATaGTTGAAAGCATCTATGTGCTGCATCAGAGCAGGGGCAGTGGGC | + |
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Preference number: 5 (lower is better) Translates to: QPLLTPTSAILSSRE*LKASMCCIRAGAVG Trigger: GCCCACTGCCCCTGCTCTGATGCAGCACATAGATGCTTTCAAGCATTCCCTGGAGGAGAGGATGGCAGAAGTTGGGGTTAGAAGTGGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079469.7 ENSMUST00000150897.8 |
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| CDS CCA 90 bp | AAGCCACGCTGGCAGGCTTTGATGCTCTCGCTCAGAAGGTCTTCATaGGTCTTTCCTCCAGAAACTCGCTCGATGTCGCTGATCACCCAG | + |
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Preference number: 5 (lower is better) Translates to: KPRWQALMLSLRRSS*VFPPETRSMSLITQ Trigger: CTGGGTGATCAGCGACATCGAGCGAGTTTCTGGAGGAAAGACCCATGAAGACCTTCTGAGCGAGAGCATCAAAGCCTGCCAGCGTGGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079469.7 ENSMUST00000150897.8 |
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| CDS CCA 90 bp | TCTGTTTTGGTGACCACCAGGGCGATGTCCCTGCAGAAGCCACGCTaGCAGGCTTTGATGCTCTCGCTCAGAAGGTCTTCATGGGTCTTT | + |
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Preference number: 5 (lower is better) Translates to: SVLVTTRAMSLQKPR*QALMLSLRRSSWVF Trigger: AAAGACCCATGAAGACCTTCTGAGCGAGAGCATCAAAGCCTGCCAGCGTGGCTTCTGCAGGGACATCGCCCTGGTGGTCACCAAAACAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079469.7 ENSMUST00000150897.8 |
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| CDS TCA 90 bp | GGTCCGCTGCCAGTACTCATGGGCACTGACCGTGTACACCAGATCTaGGGCTTCCAGAACCTTGGAGTCAGCTGGCAGTTTTCTCTTCAA | + |
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Preference number: 5 (lower is better) Translates to: GPLPVLMGTDRVHQI*GFQNLGVSWQFSLQ Trigger: TTGAAGAGAAAACTGCCAGCTGACTCCAAGGTTCTGGAAGCCTCAGATCTGGTGTACACGGTCAGTGCCCATGAGTACTGGCAGCGGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079469.7 ENSMUST00000150897.8 |
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| CDS TCA 90 bp | TTTCTTCCTCAGTCAGGATGGTCCGCTGCCAGTACTCATGGGCACTaGCCGTGTACACCAGATCTGAGGCTTCCAGAACCTTGGAGTCAG | + |
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Preference number: 5 (lower is better) Translates to: FLPQSGWSAASTHGH*PCTPDLRLPEPWSQ Trigger: CTGACTCCAAGGTTCTGGAAGCCTCAGATCTGGTGTACACGGTCAGTGCCCATGAGTACTGGCAGCGGACCATCCTGACTGAGGAAGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079469.7 ENSMUST00000150897.8 |
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| CDS GCA 90 bp | CTGCCGCTCCACCCCTCTCCTGATGACATCCTTCATTCTCTCGCATaGTTTCTTGCCAGTGATCTGAGCTGCCTCTTCATAGCAGGGCTT | + |
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Preference number: 5 (lower is better) Translates to: LPLHPSPDDILHSLA*FLASDLSCLFIAGL Trigger: AAGCCCTGCTATGAAGAGGCAGCTCAGATCACTGGCAAGAAAGCATGCGAGAGAATGAAGGATGTCATCAGGAGAGGGGTGGAGCGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079469.7 ENSMUST00000150897.8 |
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| CDS GCA 90 bp | GGGGGACATTCGCAGGAGGAAATCTTGCATGCTCCTCCGCAGCTGTaGGTTCTCAGCAACCTCCCTCAGGCTTCTGTAGAGTTTTTCCAT | + |
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Preference number: 5 (lower is better) Translates to: GGHSQEEILHAPPQL*VLSNLPQASVEFFH Trigger: ATGGAAAAACTCTACAGAAGCCTGAGGGAGGTTGCTGAGAACGCACAGCTGCGGAGGAGCATGCAAGATTTCCTCCTGCGAATGTCCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000079469.7 ENSMUST00000150897.8 |
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| CDS CCA 90 bp | CGGAGGATGTGGCTCTCCAGGCCTCCCAGGATGGCGCTTATCTCCTaGATCAGGAAGCTTCTCTTGTATCCATCTTGTTTCCAGCCACTT | + |
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Preference number: 5 (lower is better) Translates to: RRMWLSRPPRMALIS*IRKLLLYPSCFQPL Trigger: AAGTGGCTGGAAACAAGATGGATACAAGAGAAGCTTCCTGATCCAGGAGATAAGCGCCATCCTGGGAGGCCTGGAGAGCCACATCCTCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079469.7 ENSMUST00000150897.8 |
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| CDS CCA 90 bp | TGTTCATTCCGGACATCTGCAAGCTCCTTGCAGAGTCCAACTCCCTaGGGTGCAGCAAGGGTTAACATGGTAGTGATGCTGCCCTTGACC | + |
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Preference number: 5 (lower is better) Translates to: CSFRTSASSLQSPTP*GAARVNMVVMLPLT Trigger: GGTCAAGGGCAGCATCACTACCATGTTAACCCTTGCTGCACCCCAGGGAGTTGGACTCTGCAAGGAGCTTGCAGATGTCCGGAATGAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079469.7 ENSMUST00000150897.8 |
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| CDS GCA 90 bp | CTTAACTTGGGGATCTCACTTTCTTCCTCAGTCAGGATGGTCCGCTaGCAGTACTCATGGGCACTGACCGTGTACACCAGATCTGAGGCT | + |
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Preference number: 5 (lower is better) Translates to: LNLGISLSSSVRMVR*QYSWALTVYTRSEA Trigger: AGCCTCAGATCTGGTGTACACGGTCAGTGCCCATGAGTACTGGCAGCGGACCATCCTGACTGAGGAAGAAAGTGAGATCCCCAAGTTAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079469.7 ENSMUST00000150897.8 |
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| CDS GCA 90 bp | TCTGCCATCCTCTCCTCCAGGGAATGCTTGAAAGCATCTATGTGCTaGATCAGAGCAGGGGCAGTGGGCTTCCCATCCCTAAAAATGCCT | + |
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Preference number: 5 (lower is better) Translates to: SAILSSRECLKASMC*IRAGAVGFPSLKMP Trigger: AGGCATTTTTAGGGATGGGAAGCCCACTGCCCCTGCTCTGATGCAGCACATAGATGCTTTCAAGCATTCCCTGGAGGAGAGGATGGCAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079469.7 ENSMUST00000150897.8 |
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| CDS CCA 90 bp | ATCTCACTTTCTTCCTCAGTCAGGATGGTCCGCTGCCAGTACTCATaGGCACTGACCGTGTACACCAGATCTGAGGCTTCCAGAACCTTG | + |
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Preference number: 5 (lower is better) Translates to: ISLSSSVRMVRCQYS*ALTVYTRSEASRTL Trigger: CAAGGTTCTGGAAGCCTCAGATCTGGTGTACACGGTCAGTGCCCATGAGTACTGGCAGCGGACCATCCTGACTGAGGAAGAAAGTGAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079469.7 ENSMUST00000150897.8 |
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| CDS GCA 90 bp | CATGATGTGCAAACACTTTCTCCAGACACAGGCAGAAACATTGCTTaGCGGATGAGGGCATTGATCAGAGAGCTCTTGCCAGCTCCAGTG | + |
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Preference number: 5 (lower is better) Translates to: HDVQTLSPDTGRNIA*RMRALIRELLPAPV Trigger: CACTGGAGCTGGCAAGAGCTCTCTGATCAATGCCCTCATCCGGCAAGCAATGTTTCTGCCTGTGTCTGGAGAAAGTGTTTGCACATCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079469.7 ENSMUST00000150897.8 |
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| CDS GCA 90 bp | GACATCCTTCATTCTCTCGCATGCTTTCTTGCCAGTGATCTGAGCTaGCTCTTCATAGCAGGGCTTCAGGTCGTTTTGGATGGAGCTGGT | + |
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Preference number: 5 (lower is better) Translates to: DILHSLACFLASDLS*LFIAGLQVVLDGAG Trigger: ACCAGCTCCATCCAAAACGACCTGAAGCCCTGCTATGAAGAGGCAGCTCAGATCACTGGCAAGAAAGCATGCGAGAGAATGAAGGATGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079469.7 ENSMUST00000150897.8 |
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| CDS TCA 90 bp | GGCCTCATACTGCTCACAGCAGCCAGAGCTCACTTGTACGATGCATaGTGTGCAAACACTTTCTCCAGACACAGGCAGAAACATTGCTTG | + |
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Preference number: 5 (lower is better) Translates to: GLILLTAARAHLYDA*CANTFSRHRQKHCL Trigger: CAAGCAATGTTTCTGCCTGTGTCTGGAGAAAGTGTTTGCACATCATGCATCGTACAAGTGAGCTCTGGCTGCTGTGAGCAGTATGAGGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079469.7 ENSMUST00000150897.8 |
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| CDS GCA 90 bp | CTCCTGGTCCGACACTCCAGTTTTTCATATTCCTTAAGAGCACTTTaGTCTGCAGAAGGAAAGGCCTGGAATTGCCGGTCTCGATGCAAC | + |
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Preference number: 5 (lower is better) Translates to: LLVRHSSFSYSLRAL*SAEGKAWNCRSRCN Trigger: GTTGCATCGAGACCGGCAATTCCAGGCCTTTCCTTCTGCAGAGCAAAGTGCTCTTAAGGAATATGAAAAACTGGAGTGTCGGACCAGGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079469.7 ENSMUST00000150897.8 |
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| CDS GCA 90 bp | CATACTGCTCACAGCAGCCAGAGCTCACTTGTACGATGCATGATGTaGAAACACTTTCTCCAGACACAGGCAGAAACATTGCTTGCCGGA | + |
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Preference number: 5 (lower is better) Translates to: HTAHSSQSSLVRCMM*KHFLQTQAETLLAG Trigger: TCCGGCAAGCAATGTTTCTGCCTGTGTCTGGAGAAAGTGTTTGCACATCATGCATCGTACAAGTGAGCTCTGGCTGCTGTGAGCAGTATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079469.7 ENSMUST00000150897.8 |
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| CDS TCA 90 bp | AATCACTTCCACATATTTGATCAAGGGCCAGATTTGTGTCTCTGCTaGTTCTCCATCCCAGTCTCTCCTCCTGGTCCTGATGTAGGGGTC | + |
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Preference number: 5 (lower is better) Translates to: NHFHIFDQGPDLCLC*FSIPVSPPGPDVGV Trigger: GACCCCTACATCAGGACCAGGAGGAGAGACTGGGATGGAGAATCAGCAGAGACACAAATCTGGCCCTTGATCAAATATGTGGAAGTGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079469.7 ENSMUST00000150897.8 |
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| CDS TCA 90 bp | GAAGGTCTTCATGGGTCTTTCCTCCAGAAACTCGCTCGATGTCGCTaGTCACCCAGATCACGGAACACTTGTCAATGGTCTTTTTCCACA | + |
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Preference number: 5 (lower is better) Translates to: EGLHGSFLQKLARCR*SPRSRNTCQWSFST Trigger: TGTGGAAAAAGACCATTGACAAGTGTTCCGTGATCTGGGTGATCAGCGACATCGAGCGAGTTTCTGGAGGAAAGACCCATGAAGACCTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079469.7 ENSMUST00000150897.8 |
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| CDS GCA 90 bp | TTTTGGCCTCATACTGCTCACAGCAGCCAGAGCTCACTTGTACGATaGATGATGTGCAAACACTTTCTCCAGACACAGGCAGAAACATTG | + |
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Preference number: 5 (lower is better) Translates to: FWPHTAHSSQSSLVR*MMCKHFLQTQAETL Trigger: CAATGTTTCTGCCTGTGTCTGGAGAAAGTGTTTGCACATCATGCATCGTACAAGTGAGCTCTGGCTGCTGTGAGCAGTATGAGGCCAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079469.7 ENSMUST00000150897.8 |
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| CDS GCA 90 bp | TCTCTTGTATCCATCTTGTTTCCAGCCACTTCTAACCCCAACTTCTaGCATCCTCTCCTCCAGGGAATGCTTGAAAGCATCTATGTGCTG | + |
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Preference number: 5 (lower is better) Translates to: SLVSILFPATSNPNF*HPLLQGMLESIYVL Trigger: CAGCACATAGATGCTTTCAAGCATTCCCTGGAGGAGAGGATGGCAGAAGTTGGGGTTAGAAGTGGCTGGAAACAAGATGGATACAAGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079469.7 ENSMUST00000150897.8 |
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| CDS GCA 90 bp | TATTCCTTAAGAGCACTTTGCTCTGCAGAAGGAAAGGCCTGGAATTaGCGGTCTCGATGCAACCTGCGTCTTTTCCTAACAGGTTCTTTA | + |
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Preference number: 5 (lower is better) Translates to: YSLRALCSAEGKAWN*RSRCNLRLFLTGSL Trigger: TAAAGAACCTGTTAGGAAAAGACGCAGGTTGCATCGAGACCGGCAATTCCAGGCCTTTCCTTCTGCAGAGCAAAGTGCTCTTAAGGAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079469.7 ENSMUST00000150897.8 |
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| CDS CCA 90 bp | TTTTCATATTCCTTAAGAGCACTTTGCTCTGCAGAAGGAAAGGCCTaGAATTGCCGGTCTCGATGCAACCTGCGTCTTTTCCTAACAGGT | + |
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Preference number: 5 (lower is better) Translates to: FSYSLRALCSAEGKA*NCRSRCNLRLFLTG Trigger: ACCTGTTAGGAAAAGACGCAGGTTGCATCGAGACCGGCAATTCCAGGCCTTTCCTTCTGCAGAGCAAAGTGCTCTTAAGGAATATGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079469.7 ENSMUST00000150897.8 |
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| CDS TCA 90 bp | CTTCTGGGATCAGTGCAGATTTGGGAAGAATCACTTCCACATATTTaGTCAAGGGCCAGATTTGTGTCTCTGCTGATTCTCCATCCCAGT | + |
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Preference number: 5 (lower is better) Translates to: LLGSVQIWEESLPHI*SRARFVSLLILHPS Trigger: ACTGGGATGGAGAATCAGCAGAGACACAAATCTGGCCCTTGATCAAATATGTGGAAGTGATTCTTCCCAAATCTGCACTGATCCCAGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079469.7 ENSMUST00000150897.8 |
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| CDS CCA 72 bp | CCAGGCATGACCCGAGGATGCGGCGGTAGGAAGTCATaGCCACCTGGACCCCTGTCTGCAGGGGCTGTTCCA | + |
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Preference number: 6 (lower is better) Translates to: PGMTRGCGGRKS*PPGPLSAGAVP Trigger: TGGAACAGCCCCTGCAGACAGGGGTCCAGGTGGCCATGACTTCCTACCGCCGCATCCTCGGGTCATGCCTGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079469.7 ENSMUST00000150897.8 |
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| CDS GCA 72 bp | GGTTTCCTCTGCTCCTCACCAGGCATGACCCGAGGATaGGGCGGTAGGAAGTCATGGCCACCTGGACCCCTG | + |
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Preference number: 6 (lower is better) Translates to: GFLCSSPGMTRG*GGRKSWPPGPL Trigger: CAGGGGTCCAGGTGGCCATGACTTCCTACCGCCGCATCCTCGGGTCATGCCTGGTGAGGAGCAGAGGAAACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079469.7 ENSMUST00000150897.8 |
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| CDS CAA 90 bp | TCCATGGGGGCCGGCTTTGCTGGGGGACATTCGCAGGAGGAAATCTaGCATGCTCCTCCGCAGCTGTGCGTTCTCAGCAACCTCCCTCAG | + |
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Preference number: 6 (lower is better) Translates to: SMGAGFAGGHSQEEI*HAPPQLCVLSNLPQ Trigger: CTGAGGGAGGTTGCTGAGAACGCACAGCTGCGGAGGAGCATGCAAGATTTCCTCCTGCGAATGTCCCCCAGCAAAGCCGGCCCCCATGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000079469.7 ENSMUST00000150897.8 |
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| CDS GCA 72 bp | CCGGCTTTGCTGGGGGACATTCGCAGGAGGAAATCTTaGATGCTCCTCCGCAGCTGTGCGTTCTCAGCAACC | + |
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Preference number: 6 (lower is better) Translates to: PALLGDIRRRKS*MLLRSCAFSAT Trigger: GGTTGCTGAGAACGCACAGCTGCGGAGGAGCATGCAAGATTTCCTCCTGCGAATGTCCCCCAGCAAAGCCGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079469.7 ENSMUST00000150897.8 |
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| CDS CCA 72 bp | GTGACCACCAGGGCGATGTCCCTGCAGAAGCCACGCTaGCAGGCTTTGATGCTCTCGCTCAGAAGGTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: VTTRAMSLQKPR*QALMLSLRRSS Trigger: TGAAGACCTTCTGAGCGAGAGCATCAAAGCCTGCCAGCGTGGCTTCTGCAGGGACATCGCCCTGGTGGTCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079469.7 ENSMUST00000150897.8 |
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| CDS CAA 72 bp | GCCGGCTTTGCTGGGGGACATTCGCAGGAGGAAATCTaGCATGCTCCTCCGCAGCTGTGCGTTCTCAGCAAC | + |
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Preference number: 6 (lower is better) Translates to: AGFAGGHSQEEI*HAPPQLCVLSN Trigger: GTTGCTGAGAACGCACAGCTGCGGAGGAGCATGCAAGATTTCCTCCTGCGAATGTCCCCCAGCAAAGCCGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079469.7 ENSMUST00000150897.8 |
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| CDS CAA 90 bp | CCCCATGGCCATAGAGCATCCGTAGCTTCTGGGCAGCTTCTTCCGTaGCATCATCCCTGTCCCACAAGTCTGCCTCCTCTTCCCCAGACT | + |
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Preference number: 6 (lower is better) Translates to: PHGHRASVASGQLLP*HHPCPTSLPPLPQT Trigger: AGTCTGGGGAAGAGGAGGCAGACTTGTGGGACAGGGATGATGCAACGGAAGAAGCTGCCCAGAAGCTACGGATGCTCTATGGCCATGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079469.7 ENSMUST00000150897.8 |
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| CDS CAA 90 bp | GTGACCACCAGGGCGATGTCCCTGCAGAAGCCACGCTGGCAGGCTTaGATGCTCTCGCTCAGAAGGTCTTCATGGGTCTTTCCTCCAGAA | + |
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Preference number: 6 (lower is better) Translates to: VTTRAMSLQKPRWQA*MLSLRRSSWVFPPE Trigger: TTCTGGAGGAAAGACCCATGAAGACCTTCTGAGCGAGAGCATCAAAGCCTGCCAGCGTGGCTTCTGCAGGGACATCGCCCTGGTGGTCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079469.7 ENSMUST00000150897.8 |
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| CDS TCA 72 bp | GGGCGATGTCCCTGCAGAAGCCACGCTGGCAGGCTTTaGTGCTCTCGCTCAGAAGGTCTTCATGGGTCTTTC | + |
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Preference number: 6 (lower is better) Translates to: GRCPCRSHAGRL*CSRSEGLHGSF Trigger: GAAAGACCCATGAAGACCTTCTGAGCGAGAGCATCAAAGCCTGCCAGCGTGGCTTCTGCAGGGACATCGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079469.7 ENSMUST00000150897.8 |
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| CDS GCA 72 bp | CTGCTTTCAGGGTCTGGTGAAAACCTTGGTTTCCTCTaGTCCTCACCAGGCATGACCCGAGGATGCGGCGGT | + |
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Preference number: 6 (lower is better) Translates to: LLSGSGENLGFL*SSPGMTRGCGG Trigger: ACCGCCGCATCCTCGGGTCATGCCTGGTGAGGAGCAGAGGAAACCAAGGTTTTCACCAGACCCTGAAAGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079469.7 ENSMUST00000150897.8 |
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| CDS GCA 72 bp | CTTTGCTGGGGGACATTCGCAGGAGGAAATCTTGCATaGTCCTCCGCAGCTGTGCGTTCTCAGCAACCTCCC | + |
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Preference number: 6 (lower is better) Translates to: LCWGTFAGGNLA*SSAAVRSQQPP Trigger: GGGAGGTTGCTGAGAACGCACAGCTGCGGAGGAGCATGCAAGATTTCCTCCTGCGAATGTCCCCCAGCAAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079469.7 ENSMUST00000150897.8 |
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| CDS GCA 72 bp | AGCTTCTTCCGTTGCATCATCCCTGTCCCACAAGTCTaGCTCCTCTTCCCCAGACTGCTCTGCTCTGTGCAG | + |
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Preference number: 6 (lower is better) Translates to: SFFRCIIPVPQV*LLFPRLLCSVQ Trigger: CTGCACAGAGCAGAGCAGTCTGGGGAAGAGGAGGCAGACTTGTGGGACAGGGATGATGCAACGGAAGAAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079469.7 ENSMUST00000150897.8 |
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| CDS CCA 72 bp | TCTTCCTCAGTCAGGATGGTCCGCTGCCAGTACTCATaGGCACTGACCGTGTACACCAGATCTGAGGCTTCC | + |
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Preference number: 6 (lower is better) Translates to: SSSVRMVRCQYS*ALTVYTRSEAS Trigger: GGAAGCCTCAGATCTGGTGTACACGGTCAGTGCCCATGAGTACTGGCAGCGGACCATCCTGACTGAGGAAGA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079469.7 ENSMUST00000150897.8 |
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| CDS CAA 72 bp | AGGGCGATGTCCCTGCAGAAGCCACGCTGGCAGGCTTaGATGCTCTCGCTCAGAAGGTCTTCATGGGTCTTT | + |
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Preference number: 6 (lower is better) Translates to: RAMSLQKPRWQA*MLSLRRSSWVF Trigger: AAAGACCCATGAAGACCTTCTGAGCGAGAGCATCAAAGCCTGCCAGCGTGGCTTCTGCAGGGACATCGCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079469.7 ENSMUST00000150897.8 |
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| CDS GCA 72 bp | GGGATCTCACTTTCTTCCTCAGTCAGGATGGTCCGCTaGCAGTACTCATGGGCACTGACCGTGTACACCAGA | + |
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Preference number: 6 (lower is better) Translates to: GISLSSSVRMVR*QYSWALTVYTR Trigger: TCTGGTGTACACGGTCAGTGCCCATGAGTACTGGCAGCGGACCATCCTGACTGAGGAAGAAAGTGAGATCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079469.7 ENSMUST00000150897.8 |
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| CDS GCA 72 bp | CTCTCCTCCAGGGAATGCTTGAAAGCATCTATGTGCTaGATCAGAGCAGGGGCAGTGGGCTTCCCATCCCTA | + |
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Preference number: 6 (lower is better) Translates to: LSSRECLKASMC*IRAGAVGFPSL Trigger: TAGGGATGGGAAGCCCACTGCCCCTGCTCTGATGCAGCACATAGATGCTTTCAAGCATTCCCTGGAGGAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079469.7 ENSMUST00000150897.8 |
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| CDS CCA 72 bp | CGGACATCTGCAAGCTCCTTGCAGAGTCCAACTCCCTaGGGTGCAGCAAGGGTTAACATGGTAGTGATGCTG | + |
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Preference number: 6 (lower is better) Translates to: RTSASSLQSPTP*GAARVNMVVML Trigger: CAGCATCACTACCATGTTAACCCTTGCTGCACCCCAGGGAGTTGGACTCTGCAAGGAGCTTGCAGATGTCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079469.7 ENSMUST00000150897.8 |
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| CDS CAA 90 bp | CCACTTCTAACCCCAACTTCTGCCATCCTCTCCTCCAGGGAATGCTaGAAAGCATCTATGTGCTGCATCAGAGCAGGGGCAGTGGGCTTC | + |
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Preference number: 6 (lower is better) Translates to: PLLTPTSAILSSREC*KASMCCIRAGAVGF Trigger: GAAGCCCACTGCCCCTGCTCTGATGCAGCACATAGATGCTTTCAAGCATTCCCTGGAGGAGAGGATGGCAGAAGTTGGGGTTAGAAGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079469.7 ENSMUST00000150897.8 |
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| CDS TCA 72 bp | CCAGTACTCATGGGCACTGACCGTGTACACCAGATCTaGGGCTTCCAGAACCTTGGAGTCAGCTGGCAGTTT | + |
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Preference number: 6 (lower is better) Translates to: PVLMGTDRVHQI*GFQNLGVSWQF Trigger: AAACTGCCAGCTGACTCCAAGGTTCTGGAAGCCTCAGATCTGGTGTACACGGTCAGTGCCCATGAGTACTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079469.7 ENSMUST00000150897.8 |
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| CDS CAA 72 bp | CATAGAGCATCCGTAGCTTCTGGGCAGCTTCTTCCGTaGCATCATCCCTGTCCCACAAGTCTGCCTCCTCTT | + |
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Preference number: 6 (lower is better) Translates to: HRASVASGQLLP*HHPCPTSLPPL Trigger: AAGAGGAGGCAGACTTGTGGGACAGGGATGATGCAACGGAAGAAGCTGCCCAGAAGCTACGGATGCTCTATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079469.7 ENSMUST00000150897.8 |
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| CDS CAA 90 bp | ACTCCCTGGGGTGCAGCAAGGGTTAACATGGTAGTGATGCTGCCCTaGACCTTCTCAGTGATTCCATGCTTCAGCTGTCGAAACTGGTGC | + |
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Preference number: 6 (lower is better) Translates to: TPWGAARVNMVVMLP*TFSVIPCFSCRNWC Trigger: GCACCAGTTTCGACAGCTGAAGCATGGAATCACTGAGAAGGTCAAGGGCAGCATCACTACCATGTTAACCCTTGCTGCACCCCAGGGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079469.7 ENSMUST00000150897.8 |
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| CDS GCA 72 bp | TTTCCTTCTGTTCATTCCGGACATCTGCAAGCTCCTTaGAGAGTCCAACTCCCTGGGGTGCAGCAAGGGTTA | + |
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Preference number: 6 (lower is better) Translates to: FPSVHSGHLQAP*RVQLPGVQQGL Trigger: TAACCCTTGCTGCACCCCAGGGAGTTGGACTCTGCAAGGAGCTTGCAGATGTCCGGAATGAACAGAAGGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079469.7 ENSMUST00000150897.8 |
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| CDS CCA 72 bp | TGGCTCTCCAGGCCTCCCAGGATGGCGCTTATCTCCTaGATCAGGAAGCTTCTCTTGTATCCATCTTGTTTC | + |
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Preference number: 6 (lower is better) Translates to: WLSRPPRMALIS*IRKLLLYPSCF Trigger: GAAACAAGATGGATACAAGAGAAGCTTCCTGATCCAGGAGATAAGCGCCATCCTGGGAGGCCTGGAGAGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079469.7 ENSMUST00000150897.8 |
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| CDS CAA 72 bp | TCCCTGAGATATTCCTGCAAGTGGAGTTTGTCTGTTTaGGTGACCACCAGGGCGATGTCCCTGCAGAAGCCA | + |
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Preference number: 6 (lower is better) Translates to: SLRYSCKWSLSV*VTTRAMSLQKP Trigger: TGGCTTCTGCAGGGACATCGCCCTGGTGGTCACCAAAACAGACAAACTCCACTTGCAGGAATATCTCAGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079469.7 ENSMUST00000150897.8 |
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| CDS CAA 72 bp | ATTTCCTTCTGTTCATTCCGGACATCTGCAAGCTCCTaGCAGAGTCCAACTCCCTGGGGTGCAGCAAGGGTT | + |
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Preference number: 6 (lower is better) Translates to: ISFCSFRTSASS*QSPTPWGAARV Trigger: AACCCTTGCTGCACCCCAGGGAGTTGGACTCTGCAAGGAGCTTGCAGATGTCCGGAATGAACAGAAGGAAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079469.7 ENSMUST00000150897.8 |
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| CDS CAA 90 bp | ATCTTTCTTTCCCTGAGATATTCCTGCAAGTGGAGTTTGTCTGTTTaGGTGACCACCAGGGCGATGTCCCTGCAGAAGCCACGCTGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: IFLSLRYSCKWSLSV*VTTRAMSLQKPRWQ Trigger: CTGCCAGCGTGGCTTCTGCAGGGACATCGCCCTGGTGGTCACCAAAACAGACAAACTCCACTTGCAGGAATATCTCAGGGAAAGAAAGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079469.7 ENSMUST00000150897.8 |
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| CDS CAA 90 bp | AGGCCTCCCAGGATGGCGCTTATCTCCTGGATCAGGAAGCTTCTCTaGTATCCATCTTGTTTCCAGCCACTTCTAACCCCAACTTCTGCC | + |
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Preference number: 6 (lower is better) Translates to: RPPRMALISWIRKLL*YPSCFQPLLTPTSA Trigger: GGCAGAAGTTGGGGTTAGAAGTGGCTGGAAACAAGATGGATACAAGAGAAGCTTCCTGATCCAGGAGATAAGCGCCATCCTGGGAGGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079469.7 ENSMUST00000150897.8 |
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| CDS CAA 90 bp | GCCAGTGATCTGAGCTGCCTCTTCATAGCAGGGCTTCAGGTCGTTTaGGATGGAGCTGGTGACAGACTTATAGATCTTCCTTTTCCTCCG | + |
|
Preference number: 6 (lower is better) Translates to: ASDLSCLFIAGLQVV*DGAGDRLIDLPFPP Trigger: CGGAGGAAAAGGAAGATCTATAAGTCTGTCACCAGCTCCATCCAAAACGACCTGAAGCCCTGCTATGAAGAGGCAGCTCAGATCACTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079469.7 ENSMUST00000150897.8 |
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| CDS TCA 72 bp | CATGGGTCTTTCCTCCAGAAACTCGCTCGATGTCGCTaGTCACCCAGATCACGGAACACTTGTCAATGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: HGSFLQKLARCR*SPRSRNTCQWS Trigger: AGACCATTGACAAGTGTTCCGTGATCTGGGTGATCAGCGACATCGAGCGAGTTTCTGGAGGAAAGACCCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079469.7 ENSMUST00000150897.8 |
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| CDS GCA 72 bp | GTAGTGATGCTGCCCTTGACCTTCTCAGTGATTCCATaGTTCAGCTGTCGAAACTGGTGCCACATCCTCTCT | + |
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Preference number: 6 (lower is better) Translates to: VVMLPLTFSVIP*FSCRNWCHILS Trigger: AGAGAGGATGTGGCACCAGTTTCGACAGCTGAAGCATGGAATCACTGAGAAGGTCAAGGGCAGCATCACTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079469.7 ENSMUST00000150897.8 |
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| CDS CCA 72 bp | TCCTTAAGAGCACTTTGCTCTGCAGAAGGAAAGGCCTaGAATTGCCGGTCTCGATGCAACCTGCGTCTTTTC | + |
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Preference number: 6 (lower is better) Translates to: SLRALCSAEGKA*NCRSRCNLRLF Trigger: GAAAAGACGCAGGTTGCATCGAGACCGGCAATTCCAGGCCTTTCCTTCTGCAGAGCAAAGTGCTCTTAAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079469.7 ENSMUST00000150897.8 |
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| CDS CCA 72 bp | TCCTGTGCCTGGAATGTCTACCAGGACAACCCCTTCTaGGATCAGTGCAGATTTGGGAAGAATCACTTCCAC | + |
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Preference number: 6 (lower is better) Translates to: SCAWNVYQDNPF*DQCRFGKNHFH Trigger: GTGGAAGTGATTCTTCCCAAATCTGCACTGATCCCAGAAGGGGTTGTCCTGGTAGACATTCCAGGCACAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079469.7 ENSMUST00000150897.8 |
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| CDS CAA 72 bp | GCAAACACTTTCTCCAGACACAGGCAGAAACATTGCTaGCCGGATGAGGGCATTGATCAGAGAGCTCTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: ANTFSRHRQKHC*PDEGIDQRALA Trigger: GGCAAGAGCTCTCTGATCAATGCCCTCATCCGGCAAGCAATGTTTCTGCCTGTGTCTGGAGAAAGTGTTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079469.7 ENSMUST00000150897.8 |
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| CDS CAA 90 bp | CCTCCTGGTCCGACACTCCAGTTTTTCATATTCCTTAAGAGCACTTaGCTCTGCAGAAGGAAAGGCCTGGAATTGCCGGTCTCGATGCAA | + |
|
Preference number: 6 (lower is better) Translates to: PPGPTLQFFIFLKST*LCRRKGLELPVSMQ Trigger: TTGCATCGAGACCGGCAATTCCAGGCCTTTCCTTCTGCAGAGCAAAGTGCTCTTAAGGAATATGAAAAACTGGAGTGTCGGACCAGGAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079469.7 ENSMUST00000150897.8 |
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| CDS CAA 90 bp | GATGGCGCTTATCTCCTGGATCAGGAAGCTTCTCTTGTATCCATCTaGTTTCCAGCCACTTCTAACCCCAACTTCTGCCATCCTCTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: DGAYLLDQEASLVSI*FPATSNPNFCHPLL Trigger: GAGGAGAGGATGGCAGAAGTTGGGGTTAGAAGTGGCTGGAAACAAGATGGATACAAGAGAAGCTTCCTGATCCAGGAGATAAGCGCCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079469.7 ENSMUST00000150897.8 |
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| CDS TCA 72 bp | CTGCTCACAGCAGCCAGAGCTCACTTGTACGATGCATaGTGTGCAAACACTTTCTCCAGACACAGGCAGAAA | + |
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Preference number: 6 (lower is better) Translates to: LLTAARAHLYDA*CANTFSRHRQK Trigger: TTTCTGCCTGTGTCTGGAGAAAGTGTTTGCACATCATGCATCGTACAAGTGAGCTCTGGCTGCTGTGAGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079469.7 ENSMUST00000150897.8 |
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| CDS GCA 72 bp | CAAACACTTTCTCCAGACACAGGCAGAAACATTGCTTaGCGGATGAGGGCATTGATCAGAGAGCTCTTGCCA | + |
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Preference number: 6 (lower is better) Translates to: QTLSPDTGRNIA*RMRALIRELLP Trigger: TGGCAAGAGCTCTCTGATCAATGCCCTCATCCGGCAAGCAATGTTTCTGCCTGTGTCTGGAGAAAGTGTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079469.7 ENSMUST00000150897.8 |
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| CDS GCA 72 bp | CATACTGCTCACAGCAGCCAGAGCTCACTTGTACGATaGATGATGTGCAAACACTTTCTCCAGACACAGGCA | + |
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Preference number: 6 (lower is better) Translates to: HTAHSSQSSLVR*MMCKHFLQTQA Trigger: TGCCTGTGTCTGGAGAAAGTGTTTGCACATCATGCATCGTACAAGTGAGCTCTGGCTGCTGTGAGCAGTATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079469.7 ENSMUST00000150897.8 |
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| CDS GCA 72 bp | CATTCTCTCGCATGCTTTCTTGCCAGTGATCTGAGCTaGCTCTTCATAGCAGGGCTTCAGGTCGTTTTGGAT | + |
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Preference number: 6 (lower is better) Translates to: HSLACFLASDLS*LFIAGLQVVLD Trigger: ATCCAAAACGACCTGAAGCCCTGCTATGAAGAGGCAGCTCAGATCACTGGCAAGAAAGCATGCGAGAGAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079469.7 ENSMUST00000150897.8 |
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| CDS CAA 72 bp | CTGACCGTGTACACCAGATCTGAGGCTTCCAGAACCTaGGAGTCAGCTGGCAGTTTTCTCTTCAATTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: LTVYTRSEASRT*ESAGSFLFNFS Trigger: GGAGAAATTGAAGAGAAAACTGCCAGCTGACTCCAAGGTTCTGGAAGCCTCAGATCTGGTGTACACGGTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079469.7 ENSMUST00000150897.8 |
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| CDS CAA 72 bp | CTGAGCTGCCTCTTCATAGCAGGGCTTCAGGTCGTTTaGGATGGAGCTGGTGACAGACTTATAGATCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: LSCLFIAGLQVV*DGAGDRLIDLP Trigger: AGGAAGATCTATAAGTCTGTCACCAGCTCCATCCAAAACGACCTGAAGCCCTGCTATGAAGAGGCAGCTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079469.7 ENSMUST00000150897.8 |
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| CDS GCA 72 bp | CACAGCAGCCAGAGCTCACTTGTACGATGCATGATGTaGAAACACTTTCTCCAGACACAGGCAGAAACATTG | + |
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Preference number: 6 (lower is better) Translates to: HSSQSSLVRCMM*KHFLQTQAETL Trigger: CAATGTTTCTGCCTGTGTCTGGAGAAAGTGTTTGCACATCATGCATCGTACAAGTGAGCTCTGGCTGCTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079469.7 ENSMUST00000150897.8 |
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| CDS GCA 72 bp | TGCTCTGTGCAGGAGCTTAGTCAAGTCCTTCAGTTCTaGCTTCCACTCCTGATCGGACAGAAGGTGAATTTT | + |
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Preference number: 6 (lower is better) Translates to: CSVQELSQVLQF*LPLLIGQKVNF Trigger: AAAATTCACCTTCTGTCCGATCAGGAGTGGAAGGCAGAACTGAAGGACTTGACTAAGCTCCTGCACAGAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079469.7 ENSMUST00000150897.8 |
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| CDS CCA 72 bp | ACAGGGCTTCATTCAGGTCAATTCTGGCCAGAGTTCTaGAGGCATAGACCCCATTTTTCAGGCAAACTGCTT | + |
|
Preference number: 6 (lower is better) Translates to: TGLHSGQFWPEF*RHRPHFSGKLL Trigger: AAGCAGTTTGCCTGAAAAATGGGGTCTATGCCTCCAGAACTCTGGCCAGAATTGACCTGAATGAAGCCCTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079469.7 ENSMUST00000150897.8 |
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| CDS CAA 72 bp | CCGACACTCCAGTTTTTCATATTCCTTAAGAGCACTTaGCTCTGCAGAAGGAAAGGCCTGGAATTGCCGGTC | + |
|
Preference number: 6 (lower is better) Translates to: PTLQFFIFLKST*LCRRKGLELPV Trigger: GACCGGCAATTCCAGGCCTTTCCTTCTGCAGAGCAAAGTGCTCTTAAGGAATATGAAAAACTGGAGTGTCGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079469.7 ENSMUST00000150897.8 |
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| CDS CAA 72 bp | ATCTTTCTTTCCCTGAGATATTCCTGCAAGTGGAGTTaGTCTGTTTTGGTGACCACCAGGGCGATGTCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: IFLSLRYSCKWS*SVLVTTRAMSL Trigger: CAGGGACATCGCCCTGGTGGTCACCAAAACAGACAAACTCCACTTGCAGGAATATCTCAGGGAAAGAAAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079469.7 ENSMUST00000150897.8 |
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| CDS CAA 90 bp | ATATTCCTTAAGAGCACTTTGCTCTGCAGAAGGAAAGGCCTGGAATaGCCGGTCTCGATGCAACCTGCGTCTTTTCCTAACAGGTTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: IFLKSTLLCRRKGLE*PVSMQPASFPNRFF Trigger: AAAGAACCTGTTAGGAAAAGACGCAGGTTGCATCGAGACCGGCAATTCCAGGCCTTTCCTTCTGCAGAGCAAAGTGCTCTTAAGGAATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079469.7 ENSMUST00000150897.8 |
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| CDS CAA 90 bp | CCTTCTGGGATCAGTGCAGATTTGGGAAGAATCACTTCCACATATTaGATCAAGGGCCAGATTTGTGTCTCTGCTGATTCTCCATCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: PSGISADLGRITSTY*IKGQICVSADSPSQ Trigger: CTGGGATGGAGAATCAGCAGAGACACAAATCTGGCCCTTGATCAAATATGTGGAAGTGATTCTTCCCAAATCTGCACTGATCCCAGAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079469.7 ENSMUST00000150897.8 |
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| CDS CAA 90 bp | CCTGGAATGTCTACCAGGACAACCCCTTCTGGGATCAGTGCAGATTaGGGAAGAATCACTTCCACATATTTGATCAAGGGCCAGATTTGT | + |
|
Preference number: 6 (lower is better) Translates to: PGMSTRTTPSGISAD*GRITSTYLIKGQIC Trigger: ACAAATCTGGCCCTTGATCAAATATGTGGAAGTGATTCTTCCCAAATCTGCACTGATCCCAGAAGGGGTTGTCCTGGTAGACATTCCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079469.7 ENSMUST00000150897.8 |
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| CDS GCA 72 bp | CGACACTCCAGTTTTTCATATTCCTTAAGAGCACTTTaGTCTGCAGAAGGAAAGGCCTGGAATTGCCGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: RHSSFSYSLRAL*SAEGKAWNCRS Trigger: AGACCGGCAATTCCAGGCCTTTCCTTCTGCAGAGCAAAGTGCTCTTAAGGAATATGAAAAACTGGAGTGTCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079469.7 ENSMUST00000150897.8 |
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| CDS CAA 72 bp | CGCTCGATGTCGCTGATCACCCAGATCACGGAACACTaGTCAATGGTCTTTTTCCACATTTTATCCCTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: RSMSLITQITEH*SMVFFHILSLL Trigger: CAAGAGGGATAAAATGTGGAAAAAGACCATTGACAAGTGTTCCGTGATCTGGGTGATCAGCGACATCGAGCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079469.7 ENSMUST00000150897.8 |
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| CDS CAA 90 bp | ATCACGGAACACTTGTCAATGGTCTTTTTCCACATTTTATCCCTCTaGCTGTTGAAGTCTCCTGTGCCTGGAATGTCTACCAGGACAACC | + |
|
Preference number: 6 (lower is better) Translates to: ITEHLSMVFFHILSL*LLKSPVPGMSTRTT Trigger: GGTTGTCCTGGTAGACATTCCAGGCACAGGAGACTTCAACAGCAAGAGGGATAAAATGTGGAAAAAGACCATTGACAAGTGTTCCGTGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079469.7 ENSMUST00000150897.8 |
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| CDS CAA 90 bp | CTCCTCTTCTTGTCCAAGATCCTTTTCCTAATATATTCTCTTAACTaGGGGATCTCACTTTCTTCCTCAGTCAGGATGGTCCGCTGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: LLFLSKILFLIYSLN*GISLSSSVRMVRCQ Trigger: CTGGCAGCGGACCATCCTGACTGAGGAAGAAAGTGAGATCCCCAAGTTAAGAGAATATATTAGGAAAAGGATCTTGGACAAGAAGAGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079469.7 ENSMUST00000150897.8 |
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| CDS CAA 72 bp | TTGTCCAAGATCCTTTTCCTAATATATTCTCTTAACTaGGGGATCTCACTTTCTTCCTCAGTCAGGATGGTC | + |
|
Preference number: 6 (lower is better) Translates to: LSKILFLIYSLN*GISLSSSVRMV Trigger: GACCATCCTGACTGAGGAAGAAAGTGAGATCCCCAAGTTAAGAGAATATATTAGGAAAAGGATCTTGGACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079469.7 ENSMUST00000150897.8 |
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