Pregenerated sensors for NUFIP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037857Ensembl transcript IDs: ENSMUST00000100802.11, ENSMUST00000181023.2
Found 165 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACACACACACACACACAGACACAGACACACAGACACGCGCGCGCATaGTATACACAAGCTGCAGCACAACAGGATGGTAATGCGATGATA | + |
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Preference number: 1 (lower is better) Translates to: THTHTQTQTHRHARA*YTQAAAQQDGNAMI Trigger: TATCATCGCATTACCATCCTGTTGTGCTGCAGCTTGTGTATAGCATGCGCGCGCGTGTCTGTGTGTCTGTGTCTGTGTGTGTGTGTGTGT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100802.11 |
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| 3UTR TCA 90 bp | TTAAGATATAATCAGAAACAAGTAAGCTCAGAAGCAGAATTTGCCTaGAAACACACCTTCTACAATCAGGATTTATTACCTCCTCACTGG | + |
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Preference number: 1 (lower is better) Translates to: LRYNQKQVSSEAEFA*KHTFYNQDLLPPHW Trigger: CCAGTGAGGAGGTAATAAATCCTGATTGTAGAAGGTGTGTTTTCAGGCAAATTCTGCTTCTGAGCTTACTTGTTTCTGATTATATCTTAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100802.11 |
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| 3UTR-3UTR TCA 90 bp | AGACACGCGCGCGCATGCTATACACAAGCTGCAGCACAACAGGATGGTAATGCGGCCTTGTGTCCCACATaGACGGTGGCTCTAATGCTG | + |
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Preference number: 2 (lower is better) Translates to: RHARACYTQAAAQQDGNAALCPT*TVALML Trigger: CAGCATTAGAGCCACCGTTCATGTGGGACACAAGGC...CGCATTACCATCCTGTTGTGCTGCAGCTTGTGTATAGCATGCGCGCGCGTGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100802.11 |
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| 3UTR-3UTR GCA 90 bp | CACGCGCGCGCATGCTATACACAAGCTGCAGCACAACAGGATGGTAATGCGATGACACCCCACATAGGCTaGAGAACTCTTGGCAAGACA | + |
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Preference number: 2 (lower is better) Translates to: HARACYTQAAAQQDGNAMTPHIG*RTLGKT Trigger: TGTCTTGCCAAGAGTTCTGCAGCCTATGTGGGGTGT...CATCGCATTACCATCCTGTTGTGCTGCAGCTTGTGTATAGCATGCGCGCGCGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100802.11 |
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| 3UTR-3UTR CCA 90 bp | AGACACGCGCGCGCATGCTATACACAAGCTGCAGCACAACAGGATGGTAATGCGATACCTAGAAGTAAGTaGATTTGCCTTTCCAGTGGG | + |
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Preference number: 2 (lower is better) Translates to: RHARACYTQAAAQQDGNAIPRSK*ICLSSG Trigger: CCCACTGGAAAGGCAAATCCACTTACTTCTAGGTAT...CGCATTACCATCCTGTTGTGCTGCAGCTTGTGTATAGCATGCGCGCGCGTGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100802.11 |
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| 3UTR CAA 90 bp | GCCAGAGAACTTGTTTTTATGCCACTAACATCACCCAGTCTTATATaGGACCCTTCGTTTCTACACACACACACACACACACACACACAC | + |
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Preference number: 2 (lower is better) Translates to: ARELVFMPLTSPSLI*DPSFLHTHTHTHTH Trigger: GTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAAACGAAGGGTCCAATATAAGACTGGGTGATGTTAGTGGCATAAAAACAAGTTCTCTGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100802.11 |
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| 3UTR-3UTR GCA 90 bp | TTTCATTTTATATACATGGGTGGTTTGAGATGGAGAGATGGCTCGATGGTTAAGCAGAGAACCCAGGTTTaGTTCTCAGCGCCAACATGG | + |
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Preference number: 2 (lower is better) Translates to: FHFIYMGGLRWRDGSMVKQRTQV*FSAPTW Trigger: CCATGTTGGCGCTGAGAAGCAAACCTGGGTTCTCTG...CTTAACCATCGAGCCATCTCTCCATCTCAAACCACCCATGTATATAAAATGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181023.2 |
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| 3UTR-3UTR CCA 90 bp | TATATTGGACCCTTCGTTTCTACACACACACACACACACACACACACACACACAGATTTGCCTTTCCAGTaGGTCATTTGTTGCCCAAGT | + |
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Preference number: 2 (lower is better) Translates to: YIGPFVSTHTHTHTHTHTDLPFQ*VICCPS Trigger: ACTTGGGCAACAAATGACCCACTGGAAAGGCAAATC...TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAAACGAAGGGTCCAATATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100802.11 |
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| 3UTR-3UTR TCA 90 bp | ATTGAGACAAGTATCAAACAGCACAAAAGATATCTGTCCCAAAGTCCTGCTCGTGTTCCTCTGCTGCGTTaGAGATCTAGGAGCATAAAA | + |
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Preference number: 2 (lower is better) Translates to: IETSIKQHKRYLSQSPARVPLLR*RSRSIK Trigger: TTTTATGCTCCTAGATCTTCAACGCAGCAGAGGAAC...ACGAGCAGGACTTTGGGACAGATATCTTTTGTGCTGTTTGATACTTGTCTCAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100802.11 |
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| 3UTR-3UTR GCA 90 bp | ACAAGGTACAGATACCTAGAAGTAAGTGGATTTGCCTTTCCAGTGGGTCATTTGTACTTATGGTTCCTCTaGTGCGTTGAAGATCTAGGA | + |
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Preference number: 2 (lower is better) Translates to: TRYRYLEVSGFAFPVGHLYLWFL*CVEDLG Trigger: TCCTAGATCTTCAACGCAGCAGAGGAACCATAAGTA...CAAATGACCCACTGGAAAGGCAAATCCACTTACTTCTAGGTATCTGTACCTTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100802.11 |
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| 3UTR-3UTR GCA 90 bp | ATTGAGACAAGTATCAAACAGCACAAAAGATATCTGTCCCAAAGTCCTGCTCGTATGTGTGTGATGTGTTaGTACATCAGGCCAGAGAAC | + |
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Preference number: 2 (lower is better) Translates to: IETSIKQHKRYLSQSPARMCVMC*YIRPEN Trigger: GTTCTCTGGCCTGATGTAGCAACACATCACACACAT...ACGAGCAGGACTTTGGGACAGATATCTTTTGTGCTGTTTGATACTTGTCTCAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100802.11 |
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| 3UTR-3UTR GCA 90 bp | ATTGAGACAAGTATCAAACAGCACAAAAGATATCTGTCCCAAAGTCCTGCTCGTTTTAAAGCTCAAGGATaGCTCACTGATGTACACCGG | + |
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Preference number: 2 (lower is better) Translates to: IETSIKQHKRYLSQSPARFKAQG*LTDVHR Trigger: CCGGTGTACATCAGTGAGGCATCCTTGAGCTTTAAA...ACGAGCAGGACTTTGGGACAGATATCTTTTGTGCTGTTTGATACTTGTCTCAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100802.11 |
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| 3UTR-3UTR TCA 90 bp | ATTGAGACAAGTATCAAACAGCACAAAAGATATCTGTCCCAAAGTCCTGCTCGTATTCTGGGTTCCCCGTaGTTAGTGTATCACTTTAGT | + |
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Preference number: 2 (lower is better) Translates to: IETSIKQHKRYLSQSPARILGSP*LVYHFS Trigger: ACTAAAGTGATACACTAATCACGGGGAACCCAGAAT...ACGAGCAGGACTTTGGGACAGATATCTTTTGTGCTGTTTGATACTTGTCTCAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100802.11 |
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| 3UTR-3UTR TCA 90 bp | ATTGAGACAAGTATCAAACAGCACAAAAGATATCTGTCCCAAAGTCCTGCTCGTGAAGCAGAATTTGCCTaGAAACACACCTTCTACAAT | + |
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Preference number: 2 (lower is better) Translates to: IETSIKQHKRYLSQSPAREAEFA*KHTFYN Trigger: ATTGTAGAAGGTGTGTTTTCAGGCAAATTCTGCTTC...ACGAGCAGGACTTTGGGACAGATATCTTTTGTGCTGTTTGATACTTGTCTCAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100802.11 |
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| 3UTR-3UTR GCA 90 bp | ATTGAGACAAGTATCAAACAGCACAAAAGATATCTGTCCCAAAGTCCTGCTCGTCCTTTGTTAGAAGACTaGAACTGTATAAATGCCCTG | + |
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Preference number: 2 (lower is better) Translates to: IETSIKQHKRYLSQSPARPLLED*NCINAL Trigger: CAGGGCATTTATACAGTTGCAGTCTTCTAACAAAGG...ACGAGCAGGACTTTGGGACAGATATCTTTTGTGCTGTTTGATACTTGTCTCAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100802.11 |
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| 3UTR GCA 72 bp | CACACACAGACACAGACACACAGACACGCGCGCGCATaGTATACACAAGCTGCAGCACAACAGGATGGTAAT | + |
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Preference number: 3 (lower is better) Translates to: HTQTQTHRHARA*YTQAAAQQDGN Trigger: ATTACCATCCTGTTGTGCTGCAGCTTGTGTATAGCATGCGCGCGCGTGTCTGTGTGTCTGTGTCTGTGTGTG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100802.11 |
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| 3UTR-3UTR CAA 90 bp | TTTCATTTTATATACATGGGTGGTTTGAGATGGAGAGATGGCTCGATGGTTAAGCCAGAGAACCCAGGTTaGCTTCTCAGCGCCAACATG | + |
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Preference number: 3 (lower is better) Translates to: FHFIYMGGLRWRDGSMVKPENPG*LLSANM Trigger: CATGTTGGCGCTGAGAAGCAAACCTGGGTTCTCTGG...CTTAACCATCGAGCCATCTCTCCATCTCAAACCACCCATGTATATAAAATGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181023.2 |
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| 3UTR GCA 72 bp | CAGAACAAGGTACAGATACCTAGAAGTAAGTGGATTTaGCTTTCCAGTGGGTCATTTGTTGCCCAAGTAGAT | + |
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Preference number: 3 (lower is better) Translates to: QNKVQIPRSKWI*LSSGSFVAQVD Trigger: ATCTACTTGGGCAACAAATGACCCACTGGAAAGGCAAATCCACTTACTTCTAGGTATCTGTACCTTGTTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100802.11 |
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| 3UTR-3UTR CAA 90 bp | ATTGAGACAAGTATCAAACAGCACAAAAGATATCTGTCCCAAAGTCCTGCTCGTTCAATATGTGGCGTGTaGCATTTTCCAGTTTGTTCA | + |
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Preference number: 3 (lower is better) Translates to: IETSIKQHKRYLSQSPARSICGV*HFPVCS Trigger: TGAACAAACTGGAAAATGCAACACGCCACATATTGA...ACGAGCAGGACTTTGGGACAGATATCTTTTGTGCTGTTTGATACTTGTCTCAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100802.11 |
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| 3UTR TCA 72 bp | AATCAGAAACAAGTAAGCTCAGAAGCAGAATTTGCCTaGAAACACACCTTCTACAATCAGGATTTATTACCT | + |
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Preference number: 3 (lower is better) Translates to: NQKQVSSEAEFA*KHTFYNQDLLP Trigger: AGGTAATAAATCCTGATTGTAGAAGGTGTGTTTTCAGGCAAATTCTGCTTCTGAGCTTACTTGTTTCTGATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100802.11 |
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| CDS-3UTR CCA 90 bp | AGACACGCGCGCGCATGCTATACACAAGCTGCAGCACAACAGGATGGTAATGCGTTCAGCGGCTTGGGCTaGGCCTTGGGGCTGCCCTCG | + |
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Preference number: 4 (lower is better) Translates to: RHARACYTQAAAQQDGNAFSGLG*ALGLPS Trigger: CGAGGGCAGCCCCAAGGCCCAGCCCAAGCCGCTGAA...CGCATTACCATCCTGTTGTGCTGCAGCTTGTGTATAGCATGCGCGCGCGTGTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100802.11 |
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| CDS-3UTR CCA 90 bp | CACGCGCGCGCATGCTATACACAAGCTGCAGCACAACAGGATGGTAATGCGATGCATGTTTCAGCGGCTTaGGCTGGGCCTTGGGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: HARACYTQAAAQQDGNAMHVSAA*AGPWGC Trigger: GCAGCCCCAAGGCCCAGCCCAAGCCGCTGAAACATG...CATCGCATTACCATCCTGTTGTGCTGCAGCTTGTGTATAGCATGCGCGCGCGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100802.11 |
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| CDS-3UTR GCA 90 bp | CACGCGCGCGCATGCTATACACAAGCTGCAGCACAACAGGATGGTAATGCGATGTTCGGCGTTTCCTGGTaGTGCTGGAGGGTGTGTTTC | + |
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Preference number: 4 (lower is better) Translates to: HARACYTQAAAQQDGNAMFGVSW*CWRVCF Trigger: GAAACACACCCTCCAGCAGCACCAGGAAACGCCGAA...CATCGCATTACCATCCTGTTGTGCTGCAGCTTGTGTATAGCATGCGCGCGCGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100802.11 |
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| CDS-3UTR GCA 90 bp | TATATTGGACCCTTCGTTTCTACACACACACACACACACACACACACACACACAGCTGGGCCTTGGGGCTaGCCTCGGCTCCATGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: YIGPFVSTHTHTHTHTHTAGPWG*PRLHAA Trigger: TGCAGCATGGAGCCGAGGGCAGCCCCAAGGCCCAGC...TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAAACGAAGGGTCCAATATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100802.11 |
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| CDS-3UTR GCA 90 bp | CACGCGCGCGCATGCTATACACAAGCTGCAGCACAACAGGATGGTAATGCGATGTGGAGGGTGTGTTTCTaGTCATGTTTCAGCGGCTTG | + |
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Preference number: 4 (lower is better) Translates to: HARACYTQAAAQQDGNAMWRVCF*SCFSGL Trigger: CAAGCCGCTGAAACATGAGCAGAAACACACCCTCCA...CATCGCATTACCATCCTGTTGTGCTGCAGCTTGTGTATAGCATGCGCGCGCGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100802.11 |
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| CDS-3UTR CCA 90 bp | AGACACGCGCGCGCATGCTATACACAAGCTGCAGCACAACAGGATGGTAATGCGCCAGCTCATAAGCCTTaGGAAACACAGGATGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: RHARACYTQAAAQQDGNAPAHKP*ETQDAQ Trigger: CTGAGCATCCTGTGTTTCCCAAGGCTTATGAGCTGG...CGCATTACCATCCTGTTGTGCTGCAGCTTGTGTATAGCATGCGCGCGCGTGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100802.11 |
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| CDS-3UTR CCA 90 bp | CACGCGCGCGCATGCTATACACAAGCTGCAGCACAACAGGATGGTAATGCGATGGTCCACTGGAAAAACTaGGGGTGGCTTAAACAAGGT | + |
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Preference number: 4 (lower is better) Translates to: HARACYTQAAAQQDGNAMVHWKN*GWLKQG Trigger: ACCTTGTTTAAGCCACCCCCAGTTTTTCCAGTGGAC...CATCGCATTACCATCCTGTTGTGCTGCAGCTTGTGTATAGCATGCGCGCGCGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100802.11 |
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| CDS-3UTR TCA 90 bp | CACGCGCGCGCATGCTATACACAAGCTGCAGCACAACAGGATGGTAATGCGATGTATTTCAGCACCCTGTaGAACCAAAGTGGCAGGATA | + |
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Preference number: 4 (lower is better) Translates to: HARACYTQAAAQQDGNAMYFSTL*NQSGRI Trigger: TATCCTGCCACTTTGGTTTCACAGGGTGCTGAAATA...CATCGCATTACCATCCTGTTGTGCTGCAGCTTGTGTATAGCATGCGCGCGCGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100802.11 |
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| CDS-3UTR GCA 90 bp | TTTCATTTTATATACATGGGTGGTTTGAGATGGAGAGATGGCTCGATGGTTAAGGCTGGGCCTTGGGGCTaGCCTCGGCTCCATGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: FHFIYMGGLRWRDGSMVKAGPWG*PRLHAA Trigger: TGCAGCATGGAGCCGAGGGCAGCCCCAAGGCCCAGC...CTTAACCATCGAGCCATCTCTCCATCTCAAACCACCCATGTATATAAAATGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181023.2 |
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| CDS-3UTR CCA 90 bp | TTTCATTTTATATACATGGGTGGTTTGAGATGGAGAGATGGCTCGATGGTTAAGTTCAGCGGCTTGGGCTaGGCCTTGGGGCTGCCCTCG | + |
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Preference number: 4 (lower is better) Translates to: FHFIYMGGLRWRDGSMVKFSGLG*ALGLPS Trigger: CGAGGGCAGCCCCAAGGCCCAGCCCAAGCCGCTGAA...CTTAACCATCGAGCCATCTCTCCATCTCAAACCACCCATGTATATAAAATGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181023.2 |
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| CDS-3UTR CCA 90 bp | CACGCGCGCGCATGCTATACACAAGCTGCAGCACAACAGGATGGTAATGCGATGAAGCACCTTGACTACTaGTGTCTGCTTTTTGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: HARACYTQAAAQQDGNAMKHLDY*CLLFAG Trigger: ACCTGCAAAAAGCAGACACCAGTAGTCAAGGTGCTT...CATCGCATTACCATCCTGTTGTGCTGCAGCTTGTGTATAGCATGCGCGCGCGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100802.11 |
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| CDS-3UTR TCA 90 bp | AGACACGCGCGCGCATGCTATACACAAGCTGCAGCACAACAGGATGGTAATGCGAATGATAAACCCCATTaGTTCTGGAAGATATCCCCC | + |
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Preference number: 4 (lower is better) Translates to: RHARACYTQAAAQQDGNANDKPH*FWKISP Trigger: GGGGGATATCTTCCAGAATCAATGGGGTTTATCATT...CGCATTACCATCCTGTTGTGCTGCAGCTTGTGTATAGCATGCGCGCGCGTGTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100802.11 |
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| CDS-3UTR GCA 90 bp | ATTGAGACAAGTATCAAACAGCACAAAAGATATCTGTCCCAAAGTCCTGCTCGTTGGTGGTGGTGCGACTaGTGCTGCTGCTGCTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: IETSIKQHKRYLSQSPARWWWCD*CCCCCW Trigger: CCAGCAGCAGCAGCAGCAGCAGTCGCACCACCACCA...ACGAGCAGGACTTTGGGACAGATATCTTTTGTGCTGTTTGATACTTGTCTCAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100802.11 |
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| CDS-3UTR GCA 90 bp | AGACACGCGCGCGCATGCTATACACAAGCTGCAGCACAACAGGATGGTAATGCGCTGGTCTTTACAGTCTaGTTCAGGCTTGTTTCTACA | + |
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Preference number: 4 (lower is better) Translates to: RHARACYTQAAAQQDGNALVFTV*FRLVST Trigger: TGTAGAAACAAGCCTGAAGCAGACTGTAAAGACCAG...CGCATTACCATCCTGTTGTGCTGCAGCTTGTGTATAGCATGCGCGCGCGTGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100802.11 |
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| CDS-3UTR GCA 90 bp | CACGCGCGCGCATGCTATACACAAGCTGCAGCACAACAGGATGGTAATGCGATGGGGACACTAGTCTCTTaGATTATTTTGTCCTGCACT | + |
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Preference number: 4 (lower is better) Translates to: HARACYTQAAAQQDGNAMGTLVS*IILSCT Trigger: AGTGCAGGACAAAATAATGCAAGAGACTAGTGTCCC...CATCGCATTACCATCCTGTTGTGCTGCAGCTTGTGTATAGCATGCGCGCGCGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100802.11 |
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| CDS-3UTR CCA 90 bp | AGACACGCGCGCGCATGCTATACACAAGCTGCAGCACAACAGGATGGTAATGCGCTTTTCCAAAGGTGCTaGTCTTTACAGTCTGCTTCA | + |
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Preference number: 4 (lower is better) Translates to: RHARACYTQAAAQQDGNALFQRC*SLQSAS Trigger: TGAAGCAGACTGTAAAGACCAGCACCTTTGGAAAAG...CGCATTACCATCCTGTTGTGCTGCAGCTTGTGTATAGCATGCGCGCGCGTGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100802.11 |
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| CDS-3UTR CCA 90 bp | AGACACGCGCGCGCATGCTATACACAAGCTGCAGCACAACAGGATGGTAATGCGGTCTTATCTACAGCCTaGGTCTCTCCAGATTTGTTT | + |
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Preference number: 4 (lower is better) Translates to: RHARACYTQAAAQQDGNAVLSTA*VSPDLF Trigger: AAACAAATCTGGAGAGACCCAGGCTGTAGATAAGAC...CGCATTACCATCCTGTTGTGCTGCAGCTTGTGTATAGCATGCGCGCGCGTGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100802.11 |
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| CDS-3UTR TCA 90 bp | CTCAGAAGCAGAATTTGCCTGAAAACACACCTTCTACAATCAGGATTTATTACCTGCTGCTGCTGGGGATaGTGGTGCGGATGGTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: LRSRICLKTHLLQSGFITCCCWG*WCGWWW Trigger: CCACCACCATCCGCACCATCATCCCCAGCAGCAGCA...GGTAATAAATCCTGATTGTAGAAGGTGTGTTTTCAGGCAAATTCTGCTTCTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100802.11 |
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| CDS-3UTR TCA 90 bp | TTTCATTTTATATACATGGGTGGTTTGAGATGGAGAGATGGCTCGATGGTTAAGTGCTGCTGCTGGGGATaGTGGTGCGGATGGTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: FHFIYMGGLRWRDGSMVKCCCWG*WCGWWW Trigger: CCACCACCATCCGCACCATCATCCCCAGCAGCAGCA...CTTAACCATCGAGCCATCTCTCCATCTCAAACCACCCATGTATATAAAATGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181023.2 |
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| CDS-3UTR TCA 90 bp | CACGCGCGCGCATGCTATACACAAGCTGCAGCACAACAGGATGGTAATGCGATGTCCATTTCTTTAGTGTaGTATACAATAGCAGCCCTC | + |
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Preference number: 4 (lower is better) Translates to: HARACYTQAAAQQDGNAMSISLV*YTIAAL Trigger: GAGGGCTGCTATTGTATATCACACTAAAGAAATGGA...CATCGCATTACCATCCTGTTGTGCTGCAGCTTGTGTATAGCATGCGCGCGCGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100802.11 |
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| CDS-3UTR GCA 90 bp | TTTCATTTTATATACATGGGTGGTTTGAGATGGAGAGATGGCTCGATGGTTAAGTGGTGGTGGTGCGACTaGTGCTGCTGCTGCTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: FHFIYMGGLRWRDGSMVKWWWCD*CCCCCW Trigger: CCAGCAGCAGCAGCAGCAGCAGTCGCACCACCACCA...CTTAACCATCGAGCCATCTCTCCATCTCAAACCACCCATGTATATAAAATGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181023.2 |
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| CDS-3UTR GCA 90 bp | ACAAGGTACAGATACCTAGAAGTAAGTGGATTTGCCTTTCCAGTGGGTCATTTGGGCGTTTCCTGGTGCTaGTGGAGGGTGTGTTTCTGC | + |
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Preference number: 4 (lower is better) Translates to: TRYRYLEVSGFAFPVGHLGVSWC*WRVCFC Trigger: GCAGAAACACACCCTCCAGCAGCACCAGGAAACGCC...CAAATGACCCACTGGAAAGGCAAATCCACTTACTTCTAGGTATCTGTACCTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100802.11 |
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| CDS-3UTR CCA 90 bp | TTTCATTTTATATACATGGGTGGTTTGAGATGGAGAGATGGCTCGATGGTTAAGCATGTTTCAGCGGCTTaGGCTGGGCCTTGGGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: FHFIYMGGLRWRDGSMVKHVSAA*AGPWGC Trigger: GCAGCCCCAAGGCCCAGCCCAAGCCGCTGAAACATG...CTTAACCATCGAGCCATCTCTCCATCTCAAACCACCCATGTATATAAAATGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181023.2 |
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| CDS-3UTR CCA 90 bp | TATATTGGACCCTTCGTTTCTACACACACACACACACACACACACACACACACATTCTTCGGCGTTTCCTaGTGCTGCTGGAGGGTGTGT | + |
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Preference number: 4 (lower is better) Translates to: YIGPFVSTHTHTHTHTHTFFGVS*CCWRVC Trigger: ACACACCCTCCAGCAGCACCAGGAAACGCCGAAGAA...TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAAACGAAGGGTCCAATATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100802.11 |
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| CDS-3UTR GCA 90 bp | AGACACGCGCGCGCATGCTATACACAAGCTGCAGCACAACAGGATGGTAATGCGTTGGGATCTTGCTTCTaGAAATTCCATATAGATTCC | + |
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Preference number: 4 (lower is better) Translates to: RHARACYTQAAAQQDGNALGSCF*KFHIDS Trigger: GGAATCTATATGGAATTTGCAGAAGCAAGATCCCAA...CGCATTACCATCCTGTTGTGCTGCAGCTTGTGTATAGCATGCGCGCGCGTGTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100802.11 |
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| CDS-3UTR CCA 90 bp | CACGCGCGCGCATGCTATACACAAGCTGCAGCACAACAGGATGGTAATGCGATGCATTTGGAATTGCTATaGTATCGGTCTTATCTACAG | + |
|
Preference number: 4 (lower is better) Translates to: HARACYTQAAAQQDGNAMHLELL*YRSYLQ Trigger: CTGTAGATAAGACCGATACCATAGCAATTCCAAATG...CATCGCATTACCATCCTGTTGTGCTGCAGCTTGTGTATAGCATGCGCGCGCGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100802.11 |
||
| CDS-3UTR GCA 90 bp | TTTCATTTTATATACATGGGTGGTTTGAGATGGAGAGATGGCTCGATGGTTAAGGGCGTTTCCTGGTGCTaGTGGAGGGTGTGTTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FHFIYMGGLRWRDGSMVKGVSWC*WRVCFC Trigger: GCAGAAACACACCCTCCAGCAGCACCAGGAAACGCC...CTTAACCATCGAGCCATCTCTCCATCTCAAACCACCCATGTATATAAAATGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181023.2 |
||
| CDS-3UTR TCA 90 bp | ACAAGGTACAGATACCTAGAAGTAAGTGGATTTGCCTTTCCAGTGGGTCATTTGGCCAGACTCATGTCCTaGAGAACAGAATCAGTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: TRYRYLEVSGFAFPVGHLARLMS*RTESVP Trigger: TGGGACTGATTCTGTTCTTCAGGACATGAGTCTGGC...CAAATGACCCACTGGAAAGGCAAATCCACTTACTTCTAGGTATCTGTACCTTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100802.11 |
||
| CDS-3UTR TCA 90 bp | ACAAGGTACAGATACCTAGAAGTAAGTGGATTTGCCTTTCCAGTGGGTCATTTGTGCAGGTCACCTATATaGCTGGGGTCCAAGGATAAG | + |
|
Preference number: 4 (lower is better) Translates to: TRYRYLEVSGFAFPVGHLCRSPI*LGSKDK Trigger: CTTATCCTTGGACCCCAGTCATATAGGTGACCTGCA...CAAATGACCCACTGGAAAGGCAAATCCACTTACTTCTAGGTATCTGTACCTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100802.11 |
||
| CDS-3UTR GCA 90 bp | TTTCATTTTATATACATGGGTGGTTTGAGATGGAGAGATGGCTCGATGGTTAAGTTCGGCGTTTCCTGGTaGTGCTGGAGGGTGTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: FHFIYMGGLRWRDGSMVKFGVSW*CWRVCF Trigger: GAAACACACCCTCCAGCAGCACCAGGAAACGCCGAA...CTTAACCATCGAGCCATCTCTCCATCTCAAACCACCCATGTATATAAAATGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181023.2 |
||
| CDS-3UTR CCA 90 bp | ACAAGGTACAGATACCTAGAAGTAAGTGGATTTGCCTTTCCAGTGGGTCATTTGGGTCACCTATATGACTaGGGTCCAAGGATAAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TRYRYLEVSGFAFPVGHLGHLYD*GPRIRL Trigger: GAGCCTTATCCTTGGACCCCAGTCATATAGGTGACC...CAAATGACCCACTGGAAAGGCAAATCCACTTACTTCTAGGTATCTGTACCTTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100802.11 |
||
| CDS-3UTR TCA 90 bp | ATTGAGACAAGTATCAAACAGCACAAAAGATATCTGTCCCAAAGTCCTGCTCGTCTTAAACAAGGTCCATaGGTCCTCTTTGGAGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: IETSIKQHKRYLSQSPARLKQGP*VLFGGS Trigger: GCTGCCTCCAAAGAGGACTCATGGACCTTGTTTAAG...ACGAGCAGGACTTTGGGACAGATATCTTTTGTGCTGTTTGATACTTGTCTCAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100802.11 |
||
| CDS-3UTR TCA 90 bp | CTCAGAAGCAGAATTTGCCTGAAAACACACCTTCTACAATCAGGATTTATTACCTTGTTCAACGGCTGCTaGAGCCAGACTCATGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LRSRICLKTHLLQSGFITLFNGC*SQTHVL Trigger: CAGGACATGAGTCTGGCTTCAGCAGCCGTTGAACAA...GGTAATAAATCCTGATTGTAGAAGGTGTGTTTTCAGGCAAATTCTGCTTCTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100802.11 |
||
| CDS-3UTR TCA 90 bp | TTTCATTTTATATACATGGGTGGTTTGAGATGGAGAGATGGCTCGATGGTTAAGTTGTTCAACGGCTGCTaGAGCCAGACTCATGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: FHFIYMGGLRWRDGSMVKLFNGC*SQTHVL Trigger: CAGGACATGAGTCTGGCTTCAGCAGCCGTTGAACAA...CTTAACCATCGAGCCATCTCTCCATCTCAAACCACCCATGTATATAAAATGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181023.2 |
||
| CDS-3UTR TCA 90 bp | TATATTGGACCCTTCGTTTCTACACACACACACACACACACACACACACACACATTTCCAAATAGGCTTTaGACCATCTACTCGCATTCC | + |
|
Preference number: 4 (lower is better) Translates to: YIGPFVSTHTHTHTHTHTFPNRL*TIYSHS Trigger: GGAATGCGAGTAGATGGTTCAAAGCCTATTTGGAAA...TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAAACGAAGGGTCCAATATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100802.11 |
||
| CDS-3UTR TCA 90 bp | TTTCATTTTATATACATGGGTGGTTTGAGATGGAGAGATGGCTCGATGGTTAAGGCCAGACTCATGTCCTaGAGAACAGAATCAGTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: FHFIYMGGLRWRDGSMVKARLMS*RTESVP Trigger: TGGGACTGATTCTGTTCTTCAGGACATGAGTCTGGC...CTTAACCATCGAGCCATCTCTCCATCTCAAACCACCCATGTATATAAAATGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181023.2 |
||
| CDS-3UTR TCA 90 bp | TTTCATTTTATATACATGGGTGGTTTGAGATGGAGAGATGGCTCGATGGTTAAGTGCAGGTCACCTATATaGCTGGGGTCCAAGGATAAG | + |
|
Preference number: 4 (lower is better) Translates to: FHFIYMGGLRWRDGSMVKCRSPI*LGSKDK Trigger: CTTATCCTTGGACCCCAGTCATATAGGTGACCTGCA...CTTAACCATCGAGCCATCTCTCCATCTCAAACCACCCATGTATATAAAATGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181023.2 |
||
| CDS-3UTR CCA 90 bp | CTCAGAAGCAGAATTTGCCTGAAAACACACCTTCTACAATCAGGATTTATTACCTCCAATAACAGTCTCTaGGCCAGCACTGGGCTCATT | + |
|
Preference number: 4 (lower is better) Translates to: LRSRICLKTHLLQSGFITSNNSL*ASTGLI Trigger: AATGAGCCCAGTGCTGGCCCAGAGACTGTTATTGGA...GGTAATAAATCCTGATTGTAGAAGGTGTGTTTTCAGGCAAATTCTGCTTCTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100802.11 |
||
| CDS-3UTR CCA 90 bp | TTTCATTTTATATACATGGGTGGTTTGAGATGGAGAGATGGCTCGATGGTTAAGTCCAATAACAGTCTCTaGGCCAGCACTGGGCTCATT | + |
|
Preference number: 4 (lower is better) Translates to: FHFIYMGGLRWRDGSMVKSNNSL*ASTGLI Trigger: AATGAGCCCAGTGCTGGCCCAGAGACTGTTATTGGA...CTTAACCATCGAGCCATCTCTCCATCTCAAACCACCCATGTATATAAAATGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181023.2 |
||
| CDS-3UTR CCA 90 bp | TTTCATTTTATATACATGGGTGGTTTGAGATGGAGAGATGGCTCGATGGTTAAGCCAGCTCATAAGCCTTaGGAAACACAGGATGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: FHFIYMGGLRWRDGSMVKPAHKP*ETQDAQ Trigger: CTGAGCATCCTGTGTTTCCCAAGGCTTATGAGCTGG...CTTAACCATCGAGCCATCTCTCCATCTCAAACCACCCATGTATATAAAATGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181023.2 |
||
| CDS-3UTR CCA 90 bp | TTTCATTTTATATACATGGGTGGTTTGAGATGGAGAGATGGCTCGATGGTTAAGGGTCACCTATATGACTaGGGTCCAAGGATAAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: FHFIYMGGLRWRDGSMVKGHLYD*GPRIRL Trigger: GAGCCTTATCCTTGGACCCCAGTCATATAGGTGACC...CTTAACCATCGAGCCATCTCTCCATCTCAAACCACCCATGTATATAAAATGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181023.2 |
||
| CDS-3UTR CCA 90 bp | ATTGAGACAAGTATCAAACAGCACAAAAGATATCTGTCCCAAAGTCCTGCTCGTCTTTCTAGGCCTCTCTaGTATCTCTGTTCTTTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: IETSIKQHKRYLSQSPARLSRPL*YLCSLA Trigger: CGCCAAAGAACAGAGATACCAGAGAGGCCTAGAAAG...ACGAGCAGGACTTTGGGACAGATATCTTTTGTGCTGTTTGATACTTGTCTCAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100802.11 |
||
| CDS-3UTR TCA 90 bp | ACAAGGTACAGATACCTAGAAGTAAGTGGATTTGCCTTTCCAGTGGGTCATTTGGCAGGATATTCTCCTTaGAATGTCACTTCCATCACT | + |
|
Preference number: 4 (lower is better) Translates to: TRYRYLEVSGFAFPVGHLAGYSP*NVTSIT Trigger: AGTGATGGAAGTGACATTTCAAGGAGAATATCCTGC...CAAATGACCCACTGGAAAGGCAAATCCACTTACTTCTAGGTATCTGTACCTTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100802.11 |
||
| CDS-3UTR GCA 90 bp | ATTGAGACAAGTATCAAACAGCACAAAAGATATCTGTCCCAAAGTCCTGCTCGTCTGCTTTTCCAAAGGTaGTGGTCTTTACAGTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: IETSIKQHKRYLSQSPARLLFQR*WSLQSA Trigger: AGCAGACTGTAAAGACCAGCACCTTTGGAAAAGCAG...ACGAGCAGGACTTTGGGACAGATATCTTTTGTGCTGTTTGATACTTGTCTCAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100802.11 |
||
| CDS-3UTR GCA 90 bp | ACAAGGTACAGATACCTAGAAGTAAGTGGATTTGCCTTTCCAGTGGGTCATTTGTTGACTACTGGTGTCTaGTTTTTGCAGGTCACCTAT | + |
|
Preference number: 4 (lower is better) Translates to: TRYRYLEVSGFAFPVGHLLTTGV*FLQVTY Trigger: ATAGGTGACCTGCAAAAAGCAGACACCAGTAGTCAA...CAAATGACCCACTGGAAAGGCAAATCCACTTACTTCTAGGTATCTGTACCTTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100802.11 |
||
| CDS-3UTR CCA 90 bp | TTTCATTTTATATACATGGGTGGTTTGAGATGGAGAGATGGCTCGATGGTTAAGGTCCACTGGAAAAACTaGGGGTGGCTTAAACAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: FHFIYMGGLRWRDGSMVKVHWKN*GWLKQG Trigger: ACCTTGTTTAAGCCACCCCCAGTTTTTCCAGTGGAC...CTTAACCATCGAGCCATCTCTCCATCTCAAACCACCCATGTATATAAAATGAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000181023.2 |
||
| CDS-3UTR CCA 90 bp | TTTCATTTTATATACATGGGTGGTTTGAGATGGAGAGATGGCTCGATGGTTAAGCTTTCTAGGCCTCTCTaGTATCTCTGTTCTTTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: FHFIYMGGLRWRDGSMVKLSRPL*YLCSLA Trigger: CGCCAAAGAACAGAGATACCAGAGAGGCCTAGAAAG...CTTAACCATCGAGCCATCTCTCCATCTCAAACCACCCATGTATATAAAATGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181023.2 |
||
| 3UTR CAA 72 bp | CTTGTTTTTATGCCACTAACATCACCCAGTCTTATATaGGACCCTTCGTTTCTACACACACACACACACACA | + |
|
Preference number: 4 (lower is better) Translates to: LVFMPLTSPSLI*DPSFLHTHTHT Trigger: TGTGTGTGTGTGTGTGTGTAGAAACGAAGGGTCCAATATAAGACTGGGTGATGTTAGTGGCATAAAAACAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100802.11 |
||
| CDS-3UTR TCA 90 bp | TTTCATTTTATATACATGGGTGGTTTGAGATGGAGAGATGGCTCGATGGTTAAGTATTTCAGCACCCTGTaGAACCAAAGTGGCAGGATA | + |
|
Preference number: 4 (lower is better) Translates to: FHFIYMGGLRWRDGSMVKYFSTL*NQSGRI Trigger: TATCCTGCCACTTTGGTTTCACAGGGTGCTGAAATA...CTTAACCATCGAGCCATCTCTCCATCTCAAACCACCCATGTATATAAAATGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181023.2 |
||
| CDS-3UTR GCA 90 bp | TTTCATTTTATATACATGGGTGGTTTGAGATGGAGAGATGGCTCGATGGTTAAGCTGCTTTTCCAAAGGTaGTGGTCTTTACAGTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: FHFIYMGGLRWRDGSMVKLLFQR*WSLQSA Trigger: AGCAGACTGTAAAGACCAGCACCTTTGGAAAAGCAG...CTTAACCATCGAGCCATCTCTCCATCTCAAACCACCCATGTATATAAAATGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181023.2 |
||
| CDS-3UTR CCA 90 bp | TTTCATTTTATATACATGGGTGGTTTGAGATGGAGAGATGGCTCGATGGTTAAGGTTTCTACAACTTGCTaGTTGCCATTAAGGACCCTG | + |
|
Preference number: 4 (lower is better) Translates to: FHFIYMGGLRWRDGSMVKVSTTC*LPLRTL Trigger: CAGGGTCCTTAATGGCAACCAGCAAGTTGTAGAAAC...CTTAACCATCGAGCCATCTCTCCATCTCAAACCACCCATGTATATAAAATGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181023.2 |
||
| CDS-3UTR CCA 90 bp | TTTCATTTTATATACATGGGTGGTTTGAGATGGAGAGATGGCTCGATGGTTAAGAAGCACCTTGACTACTaGTGTCTGCTTTTTGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: FHFIYMGGLRWRDGSMVKKHLDY*CLLFAG Trigger: ACCTGCAAAAAGCAGACACCAGTAGTCAAGGTGCTT...CTTAACCATCGAGCCATCTCTCCATCTCAAACCACCCATGTATATAAAATGAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000181023.2 |
||
| CDS-3UTR TCA 90 bp | TTTCATTTTATATACATGGGTGGTTTGAGATGGAGAGATGGCTCGATGGTTAAGTTTCCAAATAGGCTTTaGACCATCTACTCGCATTCC | + |
|
Preference number: 4 (lower is better) Translates to: FHFIYMGGLRWRDGSMVKFPNRL*TIYSHS Trigger: GGAATGCGAGTAGATGGTTCAAAGCCTATTTGGAAA...CTTAACCATCGAGCCATCTCTCCATCTCAAACCACCCATGTATATAAAATGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181023.2 |
||
| CDS-3UTR TCA 90 bp | TTTCATTTTATATACATGGGTGGTTTGAGATGGAGAGATGGCTCGATGGTTAAGAATGATAAACCCCATTaGTTCTGGAAGATATCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: FHFIYMGGLRWRDGSMVKNDKPH*FWKISP Trigger: GGGGGATATCTTCCAGAATCAATGGGGTTTATCATT...CTTAACCATCGAGCCATCTCTCCATCTCAAACCACCCATGTATATAAAATGAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181023.2 |
||
| CDS-3UTR TCA 90 bp | TTTCATTTTATATACATGGGTGGTTTGAGATGGAGAGATGGCTCGATGGTTAAGGCAGGATATTCTCCTTaGAATGTCACTTCCATCACT | + |
|
Preference number: 4 (lower is better) Translates to: FHFIYMGGLRWRDGSMVKAGYSP*NVTSIT Trigger: AGTGATGGAAGTGACATTTCAAGGAGAATATCCTGC...CTTAACCATCGAGCCATCTCTCCATCTCAAACCACCCATGTATATAAAATGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181023.2 |
||
| CDS-3UTR TCA 90 bp | CTCAGAAGCAGAATTTGCCTGAAAACACACCTTCTACAATCAGGATTTATTACCAACACTAAAGCACCTTaGCTACTGGTGTCTGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LRSRICLKTHLLQSGFITNTKAP*LLVSAF Trigger: AAAAGCAGACACCAGTAGTCAAGGTGCTTTAGTGTT...GGTAATAAATCCTGATTGTAGAAGGTGTGTTTTCAGGCAAATTCTGCTTCTGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100802.11 |
||
| CDS-3UTR TCA 90 bp | TTTCATTTTATATACATGGGTGGTTTGAGATGGAGAGATGGCTCGATGGTTAAGAACACTAAAGCACCTTaGCTACTGGTGTCTGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: FHFIYMGGLRWRDGSMVKNTKAP*LLVSAF Trigger: AAAAGCAGACACCAGTAGTCAAGGTGCTTTAGTGTT...CTTAACCATCGAGCCATCTCTCCATCTCAAACCACCCATGTATATAAAATGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181023.2 |
||
| CDS-3UTR GCA 90 bp | TTTCATTTTATATACATGGGTGGTTTGAGATGGAGAGATGGCTCGATGGTTAAGCTTGTTTCTACAACTTaGTGGTTGCCATTAAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: FHFIYMGGLRWRDGSMVKLVSTT*WLPLRT Trigger: GGTCCTTAATGGCAACCAGCAAGTTGTAGAAACAAG...CTTAACCATCGAGCCATCTCTCCATCTCAAACCACCCATGTATATAAAATGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181023.2 |
||
| CDS-3UTR GCA 90 bp | TTTCATTTTATATACATGGGTGGTTTGAGATGGAGAGATGGCTCGATGGTTAAGCTGGTCTTTACAGTCTaGTTCAGGCTTGTTTCTACA | + |
|
Preference number: 4 (lower is better) Translates to: FHFIYMGGLRWRDGSMVKLVFTV*FRLVST Trigger: TGTAGAAACAAGCCTGAAGCAGACTGTAAAGACCAG...CTTAACCATCGAGCCATCTCTCCATCTCAAACCACCCATGTATATAAAATGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181023.2 |
||
| CDS-3UTR GCA 90 bp | TTTCATTTTATATACATGGGTGGTTTGAGATGGAGAGATGGCTCGATGGTTAAGCTTGGTTTTGATTCCTaGTTTTCCAAAGGTGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: FHFIYMGGLRWRDGSMVKLGFDS*FSKGAG Trigger: ACCAGCACCTTTGGAAAAGCAGGAATCAAAACCAAG...CTTAACCATCGAGCCATCTCTCCATCTCAAACCACCCATGTATATAAAATGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000181023.2 |
||
| CDS-3UTR GCA 90 bp | TTTCATTTTATATACATGGGTGGTTTGAGATGGAGAGATGGCTCGATGGTTAAGGGGACACTAGTCTCTTaGATTATTTTGTCCTGCACT | + |
|
Preference number: 4 (lower is better) Translates to: FHFIYMGGLRWRDGSMVKGTLVS*IILSCT Trigger: AGTGCAGGACAAAATAATGCAAGAGACTAGTGTCCC...CTTAACCATCGAGCCATCTCTCCATCTCAAACCACCCATGTATATAAAATGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000181023.2 |
||
| CDS-3UTR GCA 90 bp | ACAAGGTACAGATACCTAGAAGTAAGTGGATTTGCCTTTCCAGTGGGTCATTTGTTTAGGAACTATTTTTaGACTGCTATTGTCCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: TRYRYLEVSGFAFPVGHLFRNYF*TAIVHW Trigger: CCAGTGGACAATAGCAGTGCAAAAATAGTTCCTAAA...CAAATGACCCACTGGAAAGGCAAATCCACTTACTTCTAGGTATCTGTACCTTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100802.11 |
||
| CDS-3UTR GCA 90 bp | TTTCATTTTATATACATGGGTGGTTTGAGATGGAGAGATGGCTCGATGGTTAAGTTGACTACTGGTGTCTaGTTTTTGCAGGTCACCTAT | + |
|
Preference number: 4 (lower is better) Translates to: FHFIYMGGLRWRDGSMVKLTTGV*FLQVTY Trigger: ATAGGTGACCTGCAAAAAGCAGACACCAGTAGTCAA...CTTAACCATCGAGCCATCTCTCCATCTCAAACCACCCATGTATATAAAATGAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000181023.2 |
||
| CDS-3UTR CCA 90 bp | CCCAGTTACACAATTACAATGGGTAATTATCAGCCAATTACTTGTTCTGCAACTGTTTCTACAACTTGCTaGTTGCCATTAAGGACCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PSYTITMGNYQPITCSATVSTTC*LPLRTL Trigger: CAGGGTCCTTAATGGCAACCAGCAAGTTGTAGAAAC...AGTTGCAGAACAAGTAATTGGCTGATAATTACCCATTGTAATTGTGTAACTGGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100802.11 |
||
| CDS-3UTR CCA 90 bp | TTTCATTTTATATACATGGGTGGTTTGAGATGGAGAGATGGCTCGATGGTTAAGCTTTTCCAAAGGTGCTaGTCTTTACAGTCTGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: FHFIYMGGLRWRDGSMVKLFQRC*SLQSAS Trigger: TGAAGCAGACTGTAAAGACCAGCACCTTTGGAAAAG...CTTAACCATCGAGCCATCTCTCCATCTCAAACCACCCATGTATATAAAATGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181023.2 |
||
| CDS-3UTR CCA 90 bp | TTTCATTTTATATACATGGGTGGTTTGAGATGGAGAGATGGCTCGATGGTTAAGGTCTTATCTACAGCCTaGGTCTCTCCAGATTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: FHFIYMGGLRWRDGSMVKVLSTA*VSPDLF Trigger: AAACAAATCTGGAGAGACCCAGGCTGTAGATAAGAC...CTTAACCATCGAGCCATCTCTCCATCTCAAACCACCCATGTATATAAAATGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181023.2 |
||
| CDS-3UTR TCA 90 bp | TTTCATTTTATATACATGGGTGGTTTGAGATGGAGAGATGGCTCGATGGTTAAGTCCATTTCTTTAGTGTaGTATACAATAGCAGCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: FHFIYMGGLRWRDGSMVKSISLV*YTIAAL Trigger: GAGGGCTGCTATTGTATATCACACTAAAGAAATGGA...CTTAACCATCGAGCCATCTCTCCATCTCAAACCACCCATGTATATAAAATGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181023.2 |
||
| CDS-3UTR TCA 90 bp | ATTGAGACAAGTATCAAACAGCACAAAAGATATCTGTCCCAAAGTCCTGCTCGTTGGCTTCATTGTAAGTaGTTATCCTTTTGGGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: IETSIKQHKRYLSQSPARWLHCK*LSFWDL Trigger: AAGATCCCAAAAGGATAATCACTTACAATGAAGCCA...ACGAGCAGGACTTTGGGACAGATATCTTTTGTGCTGTTTGATACTTGTCTCAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100802.11 |
||
| CDS-3UTR GCA 90 bp | CCCAGTTACACAATTACAATGGGTAATTATCAGCCAATTACTTGTTCTGCAACTCTTGTTTCTACAACTTaGTGGTTGCCATTAAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: PSYTITMGNYQPITCSATLVSTT*WLPLRT Trigger: GGTCCTTAATGGCAACCAGCAAGTTGTAGAAACAAG...AGTTGCAGAACAAGTAATTGGCTGATAATTACCCATTGTAATTGTGTAACTGGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100802.11 |
||
| CDS-3UTR GCA 90 bp | CCCAGTTACACAATTACAATGGGTAATTATCAGCCAATTACTTGTTCTGCAACTCTTGGTTTTGATTCCTaGTTTTCCAAAGGTGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PSYTITMGNYQPITCSATLGFDS*FSKGAG Trigger: ACCAGCACCTTTGGAAAAGCAGGAATCAAAACCAAG...AGTTGCAGAACAAGTAATTGGCTGATAATTACCCATTGTAATTGTGTAACTGGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100802.11 |
||
| CDS-3UTR GCA 90 bp | CTCAGAAGCAGAATTTGCCTGAAAACACACCTTCTACAATCAGGATTTATTACCAACACCATTTGGAATTaGTATGGTATCGGTCTTATC | + |
|
Preference number: 4 (lower is better) Translates to: LRSRICLKTHLLQSGFITNTIWN*YGIGLI Trigger: GATAAGACCGATACCATAGCAATTCCAAATGGTGTT...GGTAATAAATCCTGATTGTAGAAGGTGTGTTTTCAGGCAAATTCTGCTTCTGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100802.11 |
||
| CDS-3UTR GCA 90 bp | TTTCATTTTATATACATGGGTGGTTTGAGATGGAGAGATGGCTCGATGGTTAAGAACACCATTTGGAATTaGTATGGTATCGGTCTTATC | + |
|
Preference number: 4 (lower is better) Translates to: FHFIYMGGLRWRDGSMVKNTIWN*YGIGLI Trigger: GATAAGACCGATACCATAGCAATTCCAAATGGTGTT...CTTAACCATCGAGCCATCTCTCCATCTCAAACCACCCATGTATATAAAATGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181023.2 |
||
| CDS-3UTR GCA 90 bp | TTTCATTTTATATACATGGGTGGTTTGAGATGGAGAGATGGCTCGATGGTTAAGTTTAGGAACTATTTTTaGACTGCTATTGTCCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: FHFIYMGGLRWRDGSMVKFRNYF*TAIVHW Trigger: CCAGTGGACAATAGCAGTGCAAAAATAGTTCCTAAA...CTTAACCATCGAGCCATCTCTCCATCTCAAACCACCCATGTATATAAAATGAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000181023.2 |
||
| CDS-3UTR GCA 90 bp | ATTGAGACAAGTATCAAACAGCACAAAAGATATCTGTCCCAAAGTCCTGCTCGTATCCTTTTGGGATCTTaGTTCTGCAAATTCCATATA | + |
|
Preference number: 4 (lower is better) Translates to: IETSIKQHKRYLSQSPARILLGS*FCKFHI Trigger: TATATGGAATTTGCAGAAGCAAGATCCCAAAAGGAT...ACGAGCAGGACTTTGGGACAGATATCTTTTGTGCTGTTTGATACTTGTCTCAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100802.11 |
||
| CDS-3UTR CCA 90 bp | TTTCATTTTATATACATGGGTGGTTTGAGATGGAGAGATGGCTCGATGGTTAAGCATTTGGAATTGCTATaGTATCGGTCTTATCTACAG | + |
|
Preference number: 4 (lower is better) Translates to: FHFIYMGGLRWRDGSMVKHLELL*YRSYLQ Trigger: CTGTAGATAAGACCGATACCATAGCAATTCCAAATG...CTTAACCATCGAGCCATCTCTCCATCTCAAACCACCCATGTATATAAAATGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181023.2 |
||
| CDS-3UTR GCA 90 bp | TTTCATTTTATATACATGGGTGGTTTGAGATGGAGAGATGGCTCGATGGTTAAGCAAAACACTTGCTTCTaGAAATTCCATATAGATTCC | + |
|
Preference number: 4 (lower is better) Translates to: FHFIYMGGLRWRDGSMVKQNTCF*KFHIDS Trigger: GGAATCTATATGGAATTTGCAGAAGCAAGTGTTTTG...CTTAACCATCGAGCCATCTCTCCATCTCAAACCACCCATGTATATAAAATGAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181023.2 |
||
| CDS CCA 90 bp | GGAGGGTGTGTTTCTGCTCATGTTTCAGCGGCTTGGGCTGGGCCTTaGGGCTGCCCTCGGCTCCATGCTGCAGGTATTGGTGAGGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: GGCVSAHVSAAWAGP*GCPRLHAAGIGEAA Trigger: AGCAGCCTCACCAATACCTGCAGCATGGAGCCGAGGGCAGCCCCAAGGCCCAGCCCAAGCCGCTGAAACATGAGCAGAAACACACCCTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100802.11 ENSMUST00000181023.2 |
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| CDS-3UTR CAA 90 bp | AGACACGCGCGCGCATGCTATACACAAGCTGCAGCACAACAGGATGGTAATGCGGTCCATGAGTCCTCTTaGGAGGCAGCAGCTGAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: RHARACYTQAAAQQDGNAVHESS*EAAAEA Trigger: TGCCTCAGCTGCTGCCTCCAAAGAGGACTCATGGAC...CGCATTACCATCCTGTTGTGCTGCAGCTTGTGTATAGCATGCGCGCGCGTGTCT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100802.11 |
||
| CDS-3UTR CAA 90 bp | CACGCGCGCGCATGCTATACACAAGCTGCAGCACAACAGGATGGTAATGCGATGTCCATGCTGCAGGTATaGGTGAGGCTGCTGGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: HARACYTQAAAQQDGNAMSMLQV*VRLLVM Trigger: CATCACCAGCAGCCTCACCAATACCTGCAGCATGGA...CATCGCATTACCATCCTGTTGTGCTGCAGCTTGTGTATAGCATGCGCGCGCGTG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100802.11 |
||
| CDS-3UTR CAA 90 bp | AGACACGCGCGCGCATGCTATACACAAGCTGCAGCACAACAGGATGGTAATGCGGCTTGTTTCTACAACTaGCTGGTTGCCATTAAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: RHARACYTQAAAQQDGNAACFYN*LVAIKD Trigger: GTCCTTAATGGCAACCAGCAAGTTGTAGAAACAAGC...CGCATTACCATCCTGTTGTGCTGCAGCTTGTGTATAGCATGCGCGCGCGTGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100802.11 |
||
| CDS-3UTR CAA 90 bp | AGACACGCGCGCGCATGCTATACACAAGCTGCAGCACAACAGGATGGTAATGCGACTGGTGTCTGCTTTTaGCAGGTCACCTATATGACT | + |
|
Preference number: 5 (lower is better) Translates to: RHARACYTQAAAQQDGNATGVCF*QVTYMT Trigger: AGTCATATAGGTGACCTGCAAAAAGCAGACACCAGT...CGCATTACCATCCTGTTGTGCTGCAGCTTGTGTATAGCATGCGCGCGCGTGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100802.11 |
||
| CDS-3UTR CAA 90 bp | ATTGAGACAAGTATCAAACAGCACAAAAGATATCTGTCCCAAAGTCCTGCTCGTTCATGTTTCAGCGGCTaGGGCTGGGCCTTGGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: IETSIKQHKRYLSQSPARSCFSG*GWALGL Trigger: CAGCCCCAAGGCCCAGCCCAAGCCGCTGAAACATGA...ACGAGCAGGACTTTGGGACAGATATCTTTTGTGCTGTTTGATACTTGTCTCAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100802.11 |
||
| CDS-3UTR CAA 90 bp | CACGCGCGCGCATGCTATACACAAGCTGCAGCACAACAGGATGGTAATGCGATGAGAGGCCAGGGGATTTaGATTTTCTATTTCGTAGTC | + |
|
Preference number: 5 (lower is better) Translates to: HARACYTQAAAQQDGNAMRGQGI*IFYFVV Trigger: GACTACGAAATAGAAAATCAAAATCCCCTGGCCTCT...CATCGCATTACCATCCTGTTGTGCTGCAGCTTGTGTATAGCATGCGCGCGCGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100802.11 |
||
| CDS-3UTR CAA 90 bp | TTTCATTTTATATACATGGGTGGTTTGAGATGGAGAGATGGCTCGATGGTTAAGTCATGTTTCAGCGGCTaGGGCTGGGCCTTGGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: FHFIYMGGLRWRDGSMVKSCFSG*GWALGL Trigger: CAGCCCCAAGGCCCAGCCCAAGCCGCTGAAACATGA...CTTAACCATCGAGCCATCTCTCCATCTCAAACCACCCATGTATATAAAATGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181023.2 |
||
| CDS TCA 90 bp | GTAGAGATGGGTGTTAAAGTATTAGCAGCAGTCGTTAGCAGTGGCTaGCCCCCAGATGGGTACACACTTCCATCAGTTCCTGCTAAAACA | + |
|
Preference number: 5 (lower is better) Translates to: VEMGVKVLAAVVSSG*PPDGYTLPSVPAKT Trigger: TGTTTTAGCAGGAACTGATGGAAGTGTGTACCCATCTGGGGGTCAGCCACTGCTAACGACTGCTGCTAATACTTTAACACCCATCTCTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000100802.11 ENSMUST00000181023.2 |
||
| CDS CCA 90 bp | CTCAGGTCAAAAGAACCCCAGCTATCATTCCTTTCTAGGCCTCTCTaGTATCTCTGTTCTTTGGCGGAGCCTAACAAAGTGTTCGTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: LRSKEPQLSFLSRPL*YLCSLAEPNKVFVG Trigger: TCCTACGAACACTTTGTTAGGCTCCGCCAAAGAACAGAGATACCAGAGAGGCCTAGAAAGGAATGATAGCTGGGGTTCTTTTGACCTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100802.11 ENSMUST00000181023.2 |
||
| CDS GCA 90 bp | AAGGTGCTGGTCTTTACAGTCTGCTTCAGGCTTGTTTCTACAACTTaGTGGTTGCCATTAAGGACCCTGGAAATAGGGTTGGTAGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: KVLVFTVCFRLVSTT*WLPLRTLEIGLVAS Trigger: TGAAGCTACCAACCCTATTTCCAGGGTCCTTAATGGCAACCAGCAAGTTGTAGAAACAAGCCTGAAGCAGACTGTAAAGACCAGCACCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100802.11 ENSMUST00000181023.2 |
||
| CDS CCA 90 bp | GTGCTGGTCTTTACAGTCTGCTTCAGGCTTGTTTCTACAACTTGCTaGTTGCCATTAAGGACCCTGGAAATAGGGTTGGTAGCTTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: VLVFTVCFRLVSTTC*LPLRTLEIGLVASS Trigger: TGATGAAGCTACCAACCCTATTTCCAGGGTCCTTAATGGCAACCAGCAAGTTGTAGAAACAAGCCTGAAGCAGACTGTAAAGACCAGCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100802.11 ENSMUST00000181023.2 |
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| CDS-3UTR CAA 90 bp | TTTCATTTTATATACATGGGTGGTTTGAGATGGAGAGATGGCTCGATGGTTAAGGTCCATGAGTCCTCTTaGGAGGCAGCAGCTGAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: FHFIYMGGLRWRDGSMVKVHESS*EAAAEA Trigger: TGCCTCAGCTGCTGCCTCCAAAGAGGACTCATGGAC...CTTAACCATCGAGCCATCTCTCCATCTCAAACCACCCATGTATATAAAATGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181023.2 |
||
| CDS-3UTR CAA 90 bp | ACAAGGTACAGATACCTAGAAGTAAGTGGATTTGCCTTTCCAGTGGGTCATTTGGATATCCCCCAGGTTTaGCTGATCTGTCTGAGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: TRYRYLEVSGFAFPVGHLDIPQV*LICLRG Trigger: CCCTCTCAGACAGATCAGCAAAACCTGGGGGATATC...CAAATGACCCACTGGAAAGGCAAATCCACTTACTTCTAGGTATCTGTACCTTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100802.11 |
||
| CDS CCA 90 bp | CTATTTCGTAGTCCTTTGAGAGAAACACTAAAGCACCTTGACTACTaGTGTCTGCTTTTTGCAGGTCACCTATATGACTGGGGTCCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: LFRSPLRETLKHLDY*CLLFAGHLYDWGPR Trigger: CCTTGGACCCCAGTCATATAGGTGACCTGCAAAAAGCAGACACCAGTAGTCAAGGTGCTTTAGTGTTTCTCTCAAAGGACTACGAAATAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000100802.11 ENSMUST00000181023.2 |
||
| CDS-3UTR CAA 90 bp | TTTCATTTTATATACATGGGTGGTTTGAGATGGAGAGATGGCTCGATGGTTAAGTCCATGCTGCAGGTATaGGTGAGGCTGCTGGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: FHFIYMGGLRWRDGSMVKSMLQV*VRLLVM Trigger: CATCACCAGCAGCCTCACCAATACCTGCAGCATGGA...CTTAACCATCGAGCCATCTCTCCATCTCAAACCACCCATGTATATAAAATGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181023.2 |
||
| CDS-3UTR CAA 90 bp | TATATTGGACCCTTCGTTTCTACACACACACACACACACACACACACACACACACAGTCTGCTTCAGGCTaGTTTCTACAACTTGCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: YIGPFVSTHTHTHTHTHTQSASG*FLQLAG Trigger: ACCAGCAAGTTGTAGAAACAAGCCTGAAGCAGACTG...TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAAACGAAGGGTCCAATATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100802.11 |
||
| CDS-3UTR CAA 90 bp | ACAAGGTACAGATACCTAGAAGTAAGTGGATTTGCCTTTCCAGTGGGTCATTTGACCCTGGAAATAGGGTaGGTAGCTTCATCAGAACTG | + |
|
Preference number: 5 (lower is better) Translates to: TRYRYLEVSGFAFPVGHLTLEIG*VASSEL Trigger: CAGTTCTGATGAAGCTACCAACCCTATTTCCAGGGT...CAAATGACCCACTGGAAAGGCAAATCCACTTACTTCTAGGTATCTGTACCTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100802.11 |
||
| CDS-3UTR CAA 90 bp | TTTCATTTTATATACATGGGTGGTTTGAGATGGAGAGATGGCTCGATGGTTAAGGATATCCCCCAGGTTTaGCTGATCTGTCTGAGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: FHFIYMGGLRWRDGSMVKDIPQV*LICLRG Trigger: CCCTCTCAGACAGATCAGCAAAACCTGGGGGATATC...CTTAACCATCGAGCCATCTCTCCATCTCAAACCACCCATGTATATAAAATGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000181023.2 |
||
| CDS-3UTR CAA 90 bp | TATATTGGACCCTTCGTTTCTACACACACACACACACACACACACACACACACAAATGTGACCCAGAACTaGAGGACTAGTCCGTTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: YIGPFVSTHTHTHTHTHTNVTQN*RTSPFF Trigger: GAAAAACGGACTAGTCCTCAAGTTCTGGGTCACATT...TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAAACGAAGGGTCCAATATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100802.11 |
||
| CDS-3UTR CAA 90 bp | CTCAGAAGCAGAATTTGCCTGAAAACACACCTTCTACAATCAGGATTTATTACCAGGTTTTCACAACCCTaGGCACTATTGCGCCTAGCT | + |
|
Preference number: 5 (lower is better) Translates to: LRSRICLKTHLLQSGFITRFSQP*ALLRLA Trigger: AGCTAGGCGCAATAGTGCCAAGGGTTGTGAAAACCT...GGTAATAAATCCTGATTGTAGAAGGTGTGTTTTCAGGCAAATTCTGCTTCTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100802.11 |
||
| CDS-3UTR CAA 90 bp | TTTCATTTTATATACATGGGTGGTTTGAGATGGAGAGATGGCTCGATGGTTAAGAGGTTTTCACAACCCTaGGCACTATTGCGCCTAGCT | + |
|
Preference number: 5 (lower is better) Translates to: FHFIYMGGLRWRDGSMVKRFSQP*ALLRLA Trigger: AGCTAGGCGCAATAGTGCCAAGGGTTGTGAAAACCT...CTTAACCATCGAGCCATCTCTCCATCTCAAACCACCCATGTATATAAAATGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181023.2 |
||
| CDS-3UTR CAA 90 bp | TTTCATTTTATATACATGGGTGGTTTGAGATGGAGAGATGGCTCGATGGTTAAGCAGGTTTTCCACGACTaGTTCCTCCAGGTCCAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: FHFIYMGGLRWRDGSMVKQVFHD*FLQVQF Trigger: AAACTGGACCTGGAGGAACAAGTCGTGGAAAACCTG...CTTAACCATCGAGCCATCTCTCCATCTCAAACCACCCATGTATATAAAATGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181023.2 |
||
| CDS-3UTR CAA 90 bp | CTCAGAAGCAGAATTTGCCTGAAAACACACCTTCTACAATCAGGATTTATTACCCCTGGGATAACCGACTaGAAGACTGGGTCTGAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: LRSRICLKTHLLQSGFITPGITD*KTGSEF Trigger: AAACTCAGACCCAGTCTTCAAGTCGGTTATCCCAGG...GGTAATAAATCCTGATTGTAGAAGGTGTGTTTTCAGGCAAATTCTGCTTCTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100802.11 |
||
| CDS-3UTR CAA 90 bp | TTTCATTTTATATACATGGGTGGTTTGAGATGGAGAGATGGCTCGATGGTTAAGCCTGGGATAACCGACTaGAAGACTGGGTCTGAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: FHFIYMGGLRWRDGSMVKPGITD*KTGSEF Trigger: AAACTCAGACCCAGTCTTCAAGTCGGTTATCCCAGG...CTTAACCATCGAGCCATCTCTCCATCTCAAACCACCCATGTATATAAAATGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181023.2 |
||
| CDS-3UTR CAA 90 bp | CTCAGAAGCAGAATTTGCCTGAAAACACACCTTCTACAATCAGGATTTATTACCTCTACAACTTGCTGGTaGCCATTAAGGACCCTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: LRSRICLKTHLLQSGFITSTTCW*PLRTLE Trigger: TTCCAGGGTCCTTAATGGCAACCAGCAAGTTGTAGA...GGTAATAAATCCTGATTGTAGAAGGTGTGTTTTCAGGCAAATTCTGCTTCTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100802.11 |
||
| CDS-3UTR CAA 90 bp | TTTCATTTTATATACATGGGTGGTTTGAGATGGAGAGATGGCTCGATGGTTAAGTCTACAACTTGCTGGTaGCCATTAAGGACCCTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: FHFIYMGGLRWRDGSMVKSTTCW*PLRTLE Trigger: TTCCAGGGTCCTTAATGGCAACCAGCAAGTTGTAGA...CTTAACCATCGAGCCATCTCTCCATCTCAAACCACCCATGTATATAAAATGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181023.2 |
||
| CDS-3UTR CAA 90 bp | TTTCATTTTATATACATGGGTGGTTTGAGATGGAGAGATGGCTCGATGGTTAAGCAGTCTGCTTCAGGCTaGTTTCTACAACTTGCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: FHFIYMGGLRWRDGSMVKQSASG*FLQLAG Trigger: ACCAGCAAGTTGTAGAAACAAGCCTGAAGCAGACTG...CTTAACCATCGAGCCATCTCTCCATCTCAAACCACCCATGTATATAAAATGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181023.2 |
||
| CDS-3UTR CAA 90 bp | TTTCATTTTATATACATGGGTGGTTTGAGATGGAGAGATGGCTCGATGGTTAAGCAACCCTTGGCACTATaGCGCCTAGCTTTCCTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: FHFIYMGGLRWRDGSMVKQPLAL*RLAFLF Trigger: AAAAAGGAAAGCTAGGCGCAATAGTGCCAAGGGTTG...CTTAACCATCGAGCCATCTCTCCATCTCAAACCACCCATGTATATAAAATGAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181023.2 |
||
| CDS-3UTR CAA 90 bp | CCCAGTTACACAATTACAATGGGTAATTATCAGCCAATTACTTGTTCTGCAACTCAGGTTTTCCACGACTaGTTCCTCCAGGTCCAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: PSYTITMGNYQPITCSATQVFHD*FLQVQF Trigger: AAACTGGACCTGGAGGAACAAGTCGTGGAAAACCTG...AGTTGCAGAACAAGTAATTGGCTGATAATTACCCATTGTAATTGTGTAACTGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100802.11 |
||
| CDS-3UTR CAA 90 bp | TTTCATTTTATATACATGGGTGGTTTGAGATGGAGAGATGGCTCGATGGTTAAGTGGTATCTCTGTTCTTaGGCGGAGCCTAACAAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: FHFIYMGGLRWRDGSMVKWYLCS*AEPNKV Trigger: CACTTTGTTAGGCTCCGCCAAAGAACAGAGATACCA...CTTAACCATCGAGCCATCTCTCCATCTCAAACCACCCATGTATATAAAATGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181023.2 |
||
| CDS-3UTR CAA 90 bp | TTTCATTTTATATACATGGGTGGTTTGAGATGGAGAGATGGCTCGATGGTTAAGGCTTGTTTCTACAACTaGCTGGTTGCCATTAAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: FHFIYMGGLRWRDGSMVKACFYN*LVAIKD Trigger: GTCCTTAATGGCAACCAGCAAGTTGTAGAAACAAGC...CTTAACCATCGAGCCATCTCTCCATCTCAAACCACCCATGTATATAAAATGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181023.2 |
||
| CDS-3UTR CAA 90 bp | CCCAGTTACACAATTACAATGGGTAATTATCAGCCAATTACTTGTTCTGCAACTCAACCCTTGGCACTATaGCGCCTAGCTTTCCTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: PSYTITMGNYQPITCSATQPLAL*RLAFLF Trigger: AAAAAGGAAAGCTAGGCGCAATAGTGCCAAGGGTTG...AGTTGCAGAACAAGTAATTGGCTGATAATTACCCATTGTAATTGTGTAACTGGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100802.11 |
||
| CDS-3UTR CAA 90 bp | CTCAGAAGCAGAATTTGCCTGAAAACACACCTTCTACAATCAGGATTTATTACCTGGGACACTAGTCTCTaGCATTATTTTGTCCTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: LRSRICLKTHLLQSGFITWDTSL*HYFVLH Trigger: GTGCAGGACAAAATAATGCAAGAGACTAGTGTCCCA...GGTAATAAATCCTGATTGTAGAAGGTGTGTTTTCAGGCAAATTCTGCTTCTGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100802.11 |
||
| CDS-3UTR CAA 90 bp | TTTCATTTTATATACATGGGTGGTTTGAGATGGAGAGATGGCTCGATGGTTAAGTGGGACACTAGTCTCTaGCATTATTTTGTCCTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: FHFIYMGGLRWRDGSMVKWDTSL*HYFVLH Trigger: GTGCAGGACAAAATAATGCAAGAGACTAGTGTCCCA...CTTAACCATCGAGCCATCTCTCCATCTCAAACCACCCATGTATATAAAATGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181023.2 |
||
| CDS-3UTR CAA 90 bp | TTTCATTTTATATACATGGGTGGTTTGAGATGGAGAGATGGCTCGATGGTTAAGAATGTGACCCAGAACTaGAGGACTAGTCCGTTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: FHFIYMGGLRWRDGSMVKNVTQN*RTSPFF Trigger: GAAAAACGGACTAGTCCTCAAGTTCTGGGTCACATT...CTTAACCATCGAGCCATCTCTCCATCTCAAACCACCCATGTATATAAAATGAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000181023.2 |
||
| CDS-3UTR CAA 90 bp | TTTCATTTTATATACATGGGTGGTTTGAGATGGAGAGATGGCTCGATGGTTAAGACTGGTGTCTGCTTTTaGCAGGTCACCTATATGACT | + |
|
Preference number: 5 (lower is better) Translates to: FHFIYMGGLRWRDGSMVKTGVCF*QVTYMT Trigger: AGTCATATAGGTGACCTGCAAAAAGCAGACACCAGT...CTTAACCATCGAGCCATCTCTCCATCTCAAACCACCCATGTATATAAAATGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181023.2 |
||
| CDS-3UTR CAA 90 bp | CCCAGTTACACAATTACAATGGGTAATTATCAGCCAATTACTTGTTCTGCAACTTGGTATCTCTGTTCTTaGGCGGAGCCTAACAAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: PSYTITMGNYQPITCSATWYLCS*AEPNKV Trigger: CACTTTGTTAGGCTCCGCCAAAGAACAGAGATACCA...AGTTGCAGAACAAGTAATTGGCTGATAATTACCCATTGTAATTGTGTAACTGGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100802.11 |
||
| CDS-3UTR CAA 90 bp | TTTCATTTTATATACATGGGTGGTTTGAGATGGAGAGATGGCTCGATGGTTAAGTACTCGCATTCCCTTTaGTTCACTATAGTCAGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: FHFIYMGGLRWRDGSMVKYSHSL*FTIVRL Trigger: AAGCCTGACTATAGTGAACAAAAGGGAATGCGAGTA...CTTAACCATCGAGCCATCTCTCCATCTCAAACCACCCATGTATATAAAATGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181023.2 |
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| CDS-3UTR CAA 90 bp | ACAAGGTACAGATACCTAGAAGTAAGTGGATTTGCCTTTCCAGTGGGTCATTTGGAGTTCTGTACAGTTTaGTTGAGGTTTTCCTTAACT | + |
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Preference number: 5 (lower is better) Translates to: TRYRYLEVSGFAFPVGHLEFCTV*LRFSLT Trigger: AGTTAAGGAAAACCTCAACAAAACTGTACAGAACTC...CAAATGACCCACTGGAAAGGCAAATCCACTTACTTCTAGGTATCTGTACCTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100802.11 |
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| CDS-3UTR CAA 90 bp | TTTCATTTTATATACATGGGTGGTTTGAGATGGAGAGATGGCTCGATGGTTAAGAGAGGCCAGGGGATTTaGATTTTCTATTTCGTAGTC | + |
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Preference number: 5 (lower is better) Translates to: FHFIYMGGLRWRDGSMVKRGQGI*IFYFVV Trigger: GACTACGAAATAGAAAATCAAAATCCCCTGGCCTCT...CTTAACCATCGAGCCATCTCTCCATCTCAAACCACCCATGTATATAAAATGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000181023.2 |
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| CDS-3UTR CAA 90 bp | CCCAGTTACACAATTACAATGGGTAATTATCAGCCAATTACTTGTTCTGCAACTTACTCGCATTCCCTTTaGTTCACTATAGTCAGGCTT | + |
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Preference number: 5 (lower is better) Translates to: PSYTITMGNYQPITCSATYSHSL*FTIVRL Trigger: AAGCCTGACTATAGTGAACAAAAGGGAATGCGAGTA...AGTTGCAGAACAAGTAATTGGCTGATAATTACCCATTGTAATTGTGTAACTGGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100802.11 |
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| CDS-3UTR CAA 90 bp | CTCAGAAGCAGAATTTGCCTGAAAACACACCTTCTACAATCAGGATTTATTACCCTATTTCGTAGTCCTTaGAGAGAAACACTAAAGCAC | + |
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Preference number: 5 (lower is better) Translates to: LRSRICLKTHLLQSGFITLFRSP*RETLKH Trigger: GTGCTTTAGTGTTTCTCTCAAAGGACTACGAAATAG...GGTAATAAATCCTGATTGTAGAAGGTGTGTTTTCAGGCAAATTCTGCTTCTGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100802.11 |
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| CDS-3UTR CAA 90 bp | TTTCATTTTATATACATGGGTGGTTTGAGATGGAGAGATGGCTCGATGGTTAAGCTATTTCGTAGTCCTTaGAGAGAAACACTAAAGCAC | + |
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Preference number: 5 (lower is better) Translates to: FHFIYMGGLRWRDGSMVKLFRSP*RETLKH Trigger: GTGCTTTAGTGTTTCTCTCAAAGGACTACGAAATAG...CTTAACCATCGAGCCATCTCTCCATCTCAAACCACCCATGTATATAAAATGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181023.2 |
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| CDS-3UTR CAA 90 bp | TTTCATTTTATATACATGGGTGGTTTGAGATGGAGAGATGGCTCGATGGTTAAGACACAGGCAAAACACTaGCTTCTGCAAATTCCATAT | + |
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Preference number: 5 (lower is better) Translates to: FHFIYMGGLRWRDGSMVKTQAKH*LLQIPY Trigger: ATATGGAATTTGCAGAAGCAAGTGTTTTGCCTGTGT...CTTAACCATCGAGCCATCTCTCCATCTCAAACCACCCATGTATATAAAATGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181023.2 |
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| CDS-3UTR CAA 90 bp | TTTCATTTTATATACATGGGTGGTTTGAGATGGAGAGATGGCTCGATGGTTAAGGAGTTCTGTACAGTTTaGTTGAGGTTTTCCTTAACT | + |
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Preference number: 5 (lower is better) Translates to: FHFIYMGGLRWRDGSMVKEFCTV*LRFSLT Trigger: AGTTAAGGAAAACCTCAACAAAACTGTACAGAACTC...CTTAACCATCGAGCCATCTCTCCATCTCAAACCACCCATGTATATAAAATGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181023.2 |
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| CDS-3UTR CAA 90 bp | CTCAGAAGCAGAATTTGCCTGAAAACACACCTTCTACAATCAGGATTTATTACCTATCCTTTTGGGATCTaGCTTCTGCAAATTCCATAT | + |
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Preference number: 5 (lower is better) Translates to: LRSRICLKTHLLQSGFITYPFGI*LLQIPY Trigger: ATATGGAATTTGCAGAAGCAAGATCCCAAAAGGATA...GGTAATAAATCCTGATTGTAGAAGGTGTGTTTTCAGGCAAATTCTGCTTCTGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100802.11 |
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| CDS CCA 72 bp | AGGGTGTGTTTCTGCTCATGTTTCAGCGGCTTGGGCTaGGCCTTGGGGCTGCCCTCGGCTCCATGCTGCAGG | + |
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Preference number: 6 (lower is better) Translates to: RVCFCSCFSGLG*ALGLPSAPCCR Trigger: CCTGCAGCATGGAGCCGAGGGCAGCCCCAAGGCCCAGCCCAAGCCGCTGAAACATGAGCAGAAACACACCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100802.11 ENSMUST00000181023.2 |
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| CDS CAA 72 bp | TGCTGGAGGGTGTGTTTCTGCTCATGTTTCAGCGGCTaGGGCTGGGCCTTGGGGCTGCCCTCGGCTCCATGC | + |
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Preference number: 6 (lower is better) Translates to: CWRVCFCSCFSG*GWALGLPSAPC Trigger: GCATGGAGCCGAGGGCAGCCCCAAGGCCCAGCCCAAGCCGCTGAAACATGAGCAGAAACACACCCTCCAGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100802.11 ENSMUST00000181023.2 |
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| CDS GCA 72 bp | TTCGGCGTTTCCTGGTGCTGCTGGAGGGTGTGTTTCTaGTCATGTTTCAGCGGCTTGGGCTGGGCCTTGGGG | + |
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Preference number: 6 (lower is better) Translates to: FGVSWCCWRVCF*SCFSGLGWALG Trigger: CCCCAAGGCCCAGCCCAAGCCGCTGAAACATGAGCAGAAACACACCCTCCAGCAGCACCAGGAAACGCCGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100802.11 ENSMUST00000181023.2 |
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| CDS CAA 72 bp | ACTGGGGGTGGCTTAAACAAGGTCCATGAGTCCTCTTaGGAGGCAGCAGCTGAGGCATGCTTTCCTTTAGGC | + |
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Preference number: 6 (lower is better) Translates to: TGGGLNKVHESS*EAAAEACFPLG Trigger: GCCTAAAGGAAAGCATGCCTCAGCTGCTGCCTCCAAAGAGGACTCATGGACCTTGTTTAAGCCACCCCCAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100802.11 ENSMUST00000181023.2 |
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| CDS CAA 90 bp | ACTGGAAAAACTGGGGGTGGCTTAAACAAGGTCCATGAGTCCTCTTaGGAGGCAGCAGCTGAGGCATGCTTTCCTTTAGGCCGATCATCA | + |
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Preference number: 6 (lower is better) Translates to: TGKTGGGLNKVHESS*EAAAEACFPLGRSS Trigger: TGATGATCGGCCTAAAGGAAAGCATGCCTCAGCTGCTGCCTCCAAAGAGGACTCATGGACCTTGTTTAAGCCACCCCCAGTTTTTCCAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000100802.11 ENSMUST00000181023.2 |
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| CDS CAA 90 bp | CCCCAGCTATCATTCCTTTCTAGGCCTCTCTGGTATCTCTGTTCTTaGGCGGAGCCTAACAAAGTGTTCGTAGGAGAGGCCAGGGGATTT | + |
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Preference number: 6 (lower is better) Translates to: PQLSFLSRPLWYLCS*AEPNKVFVGEARGF Trigger: AAATCCCCTGGCCTCTCCTACGAACACTTTGTTAGGCTCCGCCAAAGAACAGAGATACCAGAGAGGCCTAGAAAGGAATGATAGCTGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100802.11 ENSMUST00000181023.2 |
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| CDS TCA 72 bp | GGTGTTAAAGTATTAGCAGCAGTCGTTAGCAGTGGCTaGCCCCCAGATGGGTACACACTTCCATCAGTTCCT | + |
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Preference number: 6 (lower is better) Translates to: GVKVLAAVVSSG*PPDGYTLPSVP Trigger: AGGAACTGATGGAAGTGTGTACCCATCTGGGGGTCAGCCACTGCTAACGACTGCTGCTAATACTTTAACACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100802.11 ENSMUST00000181023.2 |
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| CDS CCA 72 bp | GCCAGTTCCAAGGGATCCAAAGTCCTCTCACGACCATaGAGGCTCATGACATGGTGTACATACGTGTACATA | + |
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Preference number: 6 (lower is better) Translates to: ASSKGSKVLSRP*RLMTWCTYVYI Trigger: TATGTACACGTATGTACACCATGTCATGAGCCTCCATGGTCGTGAGAGGACTTTGGATCCCTTGGAACTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181023.2 |
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| CDS CAA 72 bp | TCATTCCTTTCTAGGCCTCTCTGGTATCTCTGTTCTTaGGCGGAGCCTAACAAAGTGTTCGTAGGAGAGGCC | + |
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Preference number: 6 (lower is better) Translates to: SFLSRPLWYLCS*AEPNKVFVGEA Trigger: GGCCTCTCCTACGAACACTTTGTTAGGCTCCGCCAAAGAACAGAGATACCAGAGAGGCCTAGAAAGGAATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100802.11 ENSMUST00000181023.2 |
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| CDS CAA 90 bp | AAAGGTGCTGGTCTTTACAGTCTGCTTCAGGCTTGTTTCTACAACTaGCTGGTTGCCATTAAGGACCCTGGAAATAGGGTTGGTAGCTTC | + |
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Preference number: 6 (lower is better) Translates to: KGAGLYSLLQACFYN*LVAIKDPGNRVGSF Trigger: GAAGCTACCAACCCTATTTCCAGGGTCCTTAATGGCAACCAGCAAGTTGTAGAAACAAGCCTGAAGCAGACTGTAAAGACCAGCACCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100802.11 ENSMUST00000181023.2 |
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| CDS CAA 72 bp | ACAGTCTGCTTCAGGCTTGTTTCTACAACTTGCTGGTaGCCATTAAGGACCCTGGAAATAGGGTTGGTAGCT | + |
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Preference number: 6 (lower is better) Translates to: TVCFRLVSTTCW*PLRTLEIGLVA Trigger: AGCTACCAACCCTATTTCCAGGGTCCTTAATGGCAACCAGCAAGTTGTAGAAACAAGCCTGAAGCAGACTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100802.11 ENSMUST00000181023.2 |
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| CDS CAA 90 bp | CTGGTCTTTACAGTCTGCTTCAGGCTTGTTTCTACAACTTGCTGGTaGCCATTAAGGACCCTGGAAATAGGGTTGGTAGCTTCATCAGAA | + |
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Preference number: 6 (lower is better) Translates to: LVFTVCFRLVSTTCW*PLRTLEIGLVASSE Trigger: TTCTGATGAAGCTACCAACCCTATTTCCAGGGTCCTTAATGGCAACCAGCAAGTTGTAGAAACAAGCCTGAAGCAGACTGTAAAGACCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100802.11 ENSMUST00000181023.2 |
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| CDS GCA 72 bp | GTCTTTACAGTCTGCTTCAGGCTTGTTTCTACAACTTaGTGGTTGCCATTAAGGACCCTGGAAATAGGGTTG | + |
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Preference number: 6 (lower is better) Translates to: VFTVCFRLVSTT*WLPLRTLEIGL Trigger: CAACCCTATTTCCAGGGTCCTTAATGGCAACCAGCAAGTTGTAGAAACAAGCCTGAAGCAGACTGTAAAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100802.11 ENSMUST00000181023.2 |
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| CDS CAA 72 bp | GGTCTTTACAGTCTGCTTCAGGCTTGTTTCTACAACTaGCTGGTTGCCATTAAGGACCCTGGAAATAGGGTT | + |
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Preference number: 6 (lower is better) Translates to: GLYSLLQACFYN*LVAIKDPGNRV Trigger: AACCCTATTTCCAGGGTCCTTAATGGCAACCAGCAAGTTGTAGAAACAAGCCTGAAGCAGACTGTAAAGACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100802.11 ENSMUST00000181023.2 |
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| CDS CCA 72 bp | TTTACAGTCTGCTTCAGGCTTGTTTCTACAACTTGCTaGTTGCCATTAAGGACCCTGGAAATAGGGTTGGTA | + |
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Preference number: 6 (lower is better) Translates to: FTVCFRLVSTTC*LPLRTLEIGLV Trigger: TACCAACCCTATTTCCAGGGTCCTTAATGGCAACCAGCAAGTTGTAGAAACAAGCCTGAAGCAGACTGTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100802.11 ENSMUST00000181023.2 |
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| CDS CCA 72 bp | AGTCCTTTGAGAGAAACACTAAAGCACCTTGACTACTaGTGTCTGCTTTTTGCAGGTCACCTATATGACTGG | + |
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Preference number: 6 (lower is better) Translates to: SPLRETLKHLDY*CLLFAGHLYDW Trigger: CCAGTCATATAGGTGACCTGCAAAAAGCAGACACCAGTAGTCAAGGTGCTTTAGTGTTTCTCTCAAAGGACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100802.11 ENSMUST00000181023.2 |
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| CDS CAA 72 bp | ACTTGCTGGTTGCCATTAAGGACCCTGGAAATAGGGTaGGTAGCTTCATCAGAACTGAGGCTCTTTAAAGAT | + |
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Preference number: 6 (lower is better) Translates to: TCWLPLRTLEIG*VASSELRLFKD Trigger: ATCTTTAAAGAGCCTCAGTTCTGATGAAGCTACCAACCCTATTTCCAGGGTCCTTAATGGCAACCAGCAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100802.11 ENSMUST00000181023.2 |
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| CDS CAA 90 bp | GCAGCAGCTGAGGCATGCTTTCCTTTAGGCCGATCATCAAATTTTTaGCTACTCAAACCAGGTTTAATATCAGAGCTTTTACGAAGCACG | + |
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Preference number: 6 (lower is better) Translates to: AAAEACFPLGRSSNF*LLKPGLISELLRST Trigger: CGTGCTTCGTAAAAGCTCTGATATTAAACCTGGTTTGAGTAGCAAAAAATTTGATGATCGGCCTAAAGGAAAGCATGCCTCAGCTGCTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000100802.11 ENSMUST00000181023.2 |
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| CDS CAA 90 bp | GTTTCTACAACTTGCTGGTTGCCATTAAGGACCCTGGAAATAGGGTaGGTAGCTTCATCAGAACTGAGGCTCTTTAAAGATATTTCTCTT | + |
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Preference number: 6 (lower is better) Translates to: VSTTCWLPLRTLEIG*VASSELRLFKDISL Trigger: AAGAGAAATATCTTTAAAGAGCCTCAGTTCTGATGAAGCTACCAACCCTATTTCCAGGGTCCTTAATGGCAACCAGCAAGTTGTAGAAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100802.11 ENSMUST00000181023.2 |
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| CDS CAA 90 bp | TCAAGTCCCTGTTTTAATGCTGGGACACTAGTCTCTTGCATTATTTaGTCCTGCACTAAATTAAGGTTTTCACAACCCTTGGCACTATTG | + |
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Preference number: 6 (lower is better) Translates to: SSPCFNAGTLVSCII*SCTKLRFSQPLALL Trigger: CAATAGTGCCAAGGGTTGTGAAAACCTTAATTTAGTGCAGGACAAAATAATGCAAGAGACTAGTGTCCCAGCATTAAAACAGGGACTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100802.11 ENSMUST00000181023.2 |
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| CDS TCA 72 bp | GATAAAAAGGCTAGATTTAATTTGTTCAACGGCTGCTaGAGCCAGACTCATGTCCTGAAGAACAGAATCAGT | + |
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Preference number: 6 (lower is better) Translates to: DKKARFNLFNGC*SQTHVLKNRIS Trigger: ACTGATTCTGTTCTTCAGGACATGAGTCTGGCTTCAGCAGCCGTTGAACAAATTAAATCTAGCCTTTTTATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100802.11 ENSMUST00000181023.2 |
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| CDS CAA 72 bp | GAGGCATGCTTTCCTTTAGGCCGATCATCAAATTTTTaGCTACTCAAACCAGGTTTAATATCAGAGCTTTTA | + |
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Preference number: 6 (lower is better) Translates to: EACFPLGRSSNF*LLKPGLISELL Trigger: TAAAAGCTCTGATATTAAACCTGGTTTGAGTAGCAAAAAATTTGATGATCGGCCTAAAGGAAAGCATGCCTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000100802.11 ENSMUST00000181023.2 |
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