Pregenerated sensors for NUF2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026683Ensembl transcript IDs: ENSMUST00000028000.13, ENSMUST00000111368.8, ENSMUST00000192248.2, ENSMUST00000195342.6
Found 125 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAGCATGTAATCAAAATGTGTAGGGCACAGTCAGGCTCAAGGATGTaGGACTCCAACGTCGAAGAAACAACATCCTGGATAACAGTAGTA | + |
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Preference number: 1 (lower is better) Translates to: EHVIKMCRAQSGSRM*DSNVEETTSWITVV Trigger: TACTACTGTTATCCAGGATGTTGTTTCTTCGACGTTGGAGTCCCACATCCTTGAGCCTGACTGTGCCCTACACATTTTGATTACATGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111368.8 |
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| 3UTR CCA 90 bp | TCTAAGCTCTTCCAGCCTTGTAATAGAACTAATATGAATGGCCATTaGAATAGTTTCAACTCAGGGATAGGTCTGGAAGCACACAGGAAG | + |
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Preference number: 1 (lower is better) Translates to: SKLFQPCNRTNMNGH*NSFNSGIGLEAHRK Trigger: CTTCCTGTGTGCTTCCAGACCTATCCCTGAGTTGAAACTATTCCAATGGCCATTCATATTAGTTCTATTACAAGGCTGGAAGAGCTTAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028000.13 ENSMUST00000111368.8 |
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| 3UTR-3UTR GCA 90 bp | CACACAAACATGGCATTTCCTCTAGCTCCACCAGGCCAAAGCCTCAGAGCCGCACGGCTGTCCTGCGCTTaGATTCTTCCCCTCTACCCC | + |
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Preference number: 2 (lower is better) Translates to: HTNMAFPLAPPGQSLRAARLSCA*ILPLYP Trigger: GGGGTAGAGGGGAAGAATGCAAGCGCAGGACAGCCG...TGCGGCTCTGAGGCTTTGGCCTGGTGGAGCTAGAGGAAATGCCATGTTTGTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192248.2 |
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| 3UTR-3UTR GCA 90 bp | GTCCCACACAAACATGGCATTTCCTCTAGCTCCACCAGGCCAAAGCCTCAGAGCGATCCACGGCTGTCCTaGGCTTGCATTCTTCCCCTC | + |
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Preference number: 2 (lower is better) Translates to: VPHKHGISSSSTRPKPQSDPRLS*ACILPL Trigger: GAGGGGAAGAATGCAAGCGCAGGACAGCCGTGGATC...GCTCTGAGGCTTTGGCCTGGTGGAGCTAGAGGAAATGCCATGTTTGTGTGGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192248.2 |
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| 3UTR-3UTR TCA 90 bp | AGTTGTATCTCCATCAGAGTTTATGTCAGCTGTATCAGCTGTAGTCGTTGGGCCCCCGTGTTAGTGAGCTaGTATTGCAGGTACTTCCAT | + |
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Preference number: 2 (lower is better) Translates to: SCISIRVYVSCISCSRWAPVLVS*YCRYFH Trigger: ATGGAAGTACCTGCAATATCAGCTCACTAACACGGG...GGCCCAACGACTACAGCTGATACAGCTGACATAAACTCTGATGGAGATACAACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028000.13 ENSMUST00000111368.8 |
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| 3UTR-3UTR TCA 90 bp | GAGCATGTGTCCTTATTACCAGTTGGAACATCTTCAATTTTGGTGGCAGTTCAACCCGTGTTAGTGAGCTaGTATTGCAGGTACTTCCAT | + |
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Preference number: 2 (lower is better) Translates to: EHVSLLPVGTSSILVAVQPVLVS*YCRYFH Trigger: ATGGAAGTACCTGCAATATCAGCTCACTAACACGGG...TTGAACTGCCACCAAAATTGAAGATGTTCCAACTGGTAATAAGGACACATGCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111368.8 |
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| 3UTR-3UTR CCA 90 bp | ATGCAAGGCCCTGAGTTGTATCTCCATCAGAGTTTATGTCAGCTGTATCAGCTGAATATGAATGGCCATTaGAATAGTTTCAACTCAGGG | + |
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Preference number: 2 (lower is better) Translates to: MQGPELYLHQSLCQLYQLNMNGH*NSFNSG Trigger: CCCTGAGTTGAAACTATTCCAATGGCCATTCATATT...CAGCTGATACAGCTGACATAAACTCTGATGGAGATACAACTCAGGGCCTTGCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028000.13 ENSMUST00000111368.8 |
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| 3UTR-3UTR CCA 90 bp | GAGTTCAGTATCTATTTATTCCAACCAGTACATAGAAAAAGAGAGAGAGTAGGGAGTCTATACAATACATaGCATGTTGGAGCCTGGGAA | + |
|
Preference number: 2 (lower is better) Translates to: EFSIYLFQPVHRKRERVGSLYNT*HVGAWE Trigger: TTCCCAGGCTCCAACATGCCATGTATTGTATAGACT...CCCTACTCTCTCTCTTTTTCTATGTACTGGTTGGAATAAATAGATACTGAACTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028000.13 ENSMUST00000111368.8 |
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| 3UTR CAA 90 bp | ATAGTGGAGCATGTGTCCTTATTACCAGTTGGAACATCTTCAATTTaGGTGGCAGTTCAAATTTTTGCTAATAAGTCTTCAGAGATCATC | + |
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Preference number: 2 (lower is better) Translates to: IVEHVSLLPVGTSSI*VAVQIFANKSSEII Trigger: GATGATCTCTGAAGACTTATTAGCAAAAATTTGAACTGCCACCAAAATTGAAGATGTTCCAACTGGTAATAAGGACACATGCTCCACTAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111368.8 |
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| 3UTR-3UTR TCA 90 bp | AAGCTCTTCCAGCCTTGTAATAGAACTAATATGAATGGCCATTGGAATAGTTTCCATCGCCATATAAAATaGCACCAAAGAGAAACAAGA | + |
|
Preference number: 2 (lower is better) Translates to: KLFQPCNRTNMNGHWNSFHRHIK*HQRETR Trigger: TCTTGTTTCTCTTTGGTGTCATTTTATATGGCGATG...GAAACTATTCCAATGGCCATTCATATTAGTTCTATTACAAGGCTGGAAGAGCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028000.13 ENSMUST00000111368.8 |
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| 3UTR-3UTR CCA 90 bp | CGTTATTTGAATTGTAGTAAAAGTCTATACAATACATGGCATGTTGGAGCCTGGAATATGAATGGCCATTaGAATAGTTTCAACTCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: RYLNCSKSLYNTWHVGAWNMNGH*NSFNSG Trigger: CCCTGAGTTGAAACTATTCCAATGGCCATTCATATT...CCAGGCTCCAACATGCCATGTATTGTATAGACTTTTACTACAATTCAAATAACG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028000.13 ENSMUST00000111368.8 |
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| 3UTR-3UTR CAA 90 bp | ACAAACATGGCATTTCCTCTAGCTCCACCAGGCCAAAGCCTCAGAGCCGCAGTGACGGCTGTCCTGCGCTaGCATTCTTCCCCTCTACCC | + |
|
Preference number: 3 (lower is better) Translates to: TNMAFPLAPPGQSLRAAVTAVLR*HSSPLP Trigger: GGGTAGAGGGGAAGAATGCAAGCGCAGGACAGCCGT...CACTGCGGCTCTGAGGCTTTGGCCTGGTGGAGCTAGAGGAAATGCCATGTTTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192248.2 |
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| 3UTR CCA 72 bp | ATCAAAATGTGTAGGGCACAGTCAGGCTCAAGGATGTaGGACTCCAACGTCGAAGAAACAACATCCTGGATA | + |
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Preference number: 3 (lower is better) Translates to: IKMCRAQSGSRM*DSNVEETTSWI Trigger: TATCCAGGATGTTGTTTCTTCGACGTTGGAGTCCCACATCCTTGAGCCTGACTGTGCCCTACACATTTTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111368.8 |
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| 3UTR TCA 72 bp | TCTGGAAGCACACAGGAAGCACATCGCCATATAAAATaGCACCAAAGAGAAACAAGAACTAGTGGTACCCGT | + |
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Preference number: 3 (lower is better) Translates to: SGSTQEAHRHIK*HQRETRTSGTR Trigger: ACGGGTACCACTAGTTCTTGTTTCTCTTTGGTGTCATTTTATATGGCGATGTGCTTCCTGTGTGCTTCCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028000.13 ENSMUST00000111368.8 |
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| 3UTR GCA 72 bp | TGTGTACCATGTGTAATACCTTTCTGCTCTAACCCTTaGGTGATGAAGTCCCACACAAACATGGCATTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: CVPCVIPFCSNP*VMKSHTNMAFP Trigger: AGGAAATGCCATGTTTGTGTGGGACTTCATCACGCAAGGGTTAGAGCAGAAAGGTATTACACATGGTACACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192248.2 |
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| 3UTR CCA 72 bp | TTCCAGCCTTGTAATAGAACTAATATGAATGGCCATTaGAATAGTTTCAACTCAGGGATAGGTCTGGAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: FQPCNRTNMNGH*NSFNSGIGLEA Trigger: TGCTTCCAGACCTATCCCTGAGTTGAAACTATTCCAATGGCCATTCATATTAGTTCTATTACAAGGCTGGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028000.13 ENSMUST00000111368.8 |
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| 3UTR TCA 72 bp | AGAGAGAGTAGGGACATAAAAGCTGTACACGTTATTTaGATTGTAGTAAAAGTCTATACAATACATGGCATG | + |
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Preference number: 3 (lower is better) Translates to: RESRDIKAVHVI*IVVKVYTIHGM Trigger: CATGCCATGTATTGTATAGACTTTTACTACAATTCAAATAACGTGTACAGCTTTTATGTCCCTACTCTCTCT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028000.13 ENSMUST00000111368.8 |
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| 3UTR CCA 72 bp | TGTCCTTATTACCAGTTGGAACATCTTCAATTTTGGTaGCAGTTCAAATTTTTGCTAATAAGTCTTCAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: CPYYQLEHLQFW*QFKFLLISLQR Trigger: TCTCTGAAGACTTATTAGCAAAAATTTGAACTGCCACCAAAATTGAAGATGTTCCAACTGGTAATAAGGACA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111368.8 |
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| 3UTR CCA 72 bp | ATGTGTCCTTATTACCAGTTGGAACATCTTCAATTTTaGTGGCAGTTCAAATTTTTGCTAATAAGTCTTCAG | + |
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Preference number: 3 (lower is better) Translates to: MCPYYQLEHLQF*WQFKFLLISLQ Trigger: CTGAAGACTTATTAGCAAAAATTTGAACTGCCACCAAAATTGAAGATGTTCCAACTGGTAATAAGGACACAT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111368.8 |
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| CDS-3UTR GCA 90 bp | CGCAGTGGGATCCACGGCTGTCCTGCGCTTGCATTCTTCCCCTCTACCCCACACATGTCATCCATAAACTaGTTGAACTCCTCTCGCTCC | + |
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Preference number: 4 (lower is better) Translates to: RSGIHGCPALAFFPSTPHMSSIN*LNSSRS Trigger: GGAGCGAGAGGAGTTCAAGCAGTTTATGGATGACAT...GTGTGGGGTAGAGGGGAAGAATGCAAGCGCAGGACAGCCGTGGATCCCACTGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192248.2 |
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| CDS-3UTR GCA 90 bp | CAGTGGGATCCACGGCTGTCCTGCGCTTGCATTCTTCCCCTCTACCCCACACACTTGGCATATTCCTCCTaGAGCAGTGTCGTTTTCTGT | + |
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Preference number: 4 (lower is better) Translates to: QWDPRLSCACILPLYPTHLAYSS*SSVVFC Trigger: ACAGAAAACGACACTGCTGCAGGAGGAATATGCCAA...GTGTGTGGGGTAGAGGGGAAGAATGCAAGCGCAGGACAGCCGTGGATCCCACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000192248.2 |
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| CDS-3UTR TCA 90 bp | AACATGGCATTTCCTCTAGCTCCACCAGGCCAAAGCCTCAGAGCCGCAGTGGGACAGCCGGAACGGTATTaGGTTTTTCCAGTTTCATCA | + |
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Preference number: 4 (lower is better) Translates to: NMAFPLAPPGQSLRAAVGQPERY*VFPVSS Trigger: TGATGAAACTGGAAAAACTCAATACCGTTCCGGCTG...TCCCACTGCGGCTCTGAGGCTTTGGCCTGGTGGAGCTAGAGGAAATGCCATGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000192248.2 |
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| CDS-3UTR TCA 90 bp | GGCCATTGGAATAGTTTCAACTCAGGGATAGGTCTGGAAGCACACAGGAAGCACAACTGCACCTCCAGCTaGCAGGAAGGCAAGCAATCC | + |
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Preference number: 4 (lower is better) Translates to: GHWNSFNSGIGLEAHRKHNCTSS*QEGKQS Trigger: GGATTGCTTGCCTTCCTGTCAGCTGGAGGTGCAGTT...GTGCTTCCTGTGTGCTTCCAGACCTATCCCTGAGTTGAAACTATTCCAATGGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028000.13 ENSMUST00000111368.8 |
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| CDS-3UTR TCA 90 bp | CAGTGGGATCCACGGCTGTCCTGCGCTTGCATTCTTCCCCTCTACCCCACACACAATTTATTGCGAATATaGACCACAAGCTCAGCTACA | + |
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Preference number: 4 (lower is better) Translates to: QWDPRLSCACILPLYPTHNLLRI*TTSSAT Trigger: TGTAGCTGAGCTTGTGGTTCATATTCGCAATAAATT...GTGTGTGGGGTAGAGGGGAAGAATGCAAGCGCAGGACAGCCGTGGATCCCACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192248.2 |
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| CDS-3UTR TCA 90 bp | CCACACAAACATGGCATTTCCTCTAGCTCCACCAGGCCAAAGCCTCAGAGCCGCAAAAGAACAAACTTCTaGCTGGTAAGAAGCCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: PHKHGISSSSTRPKPQSRKRTNF*LVRSPP Trigger: TGGAGGGCTTCTTACCAGTCAGAAGTTTGTTCTTTT...GCGGCTCTGAGGCTTTGGCCTGGTGGAGCTAGAGGAAATGCCATGTTTGTGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192248.2 |
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| CDS-3UTR TCA 90 bp | GATGAAGTCCCACACAAACATGGCATTTCCTCTAGCTCCACCAGGCCAAAGCCTAGGTGCTGCAGCTCCTaGATGTCATCCATAAACTGC | + |
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Preference number: 4 (lower is better) Translates to: DEVPHKHGISSSSTRPKPRCCSS*MSSINC Trigger: GCAGTTTATGGATGACATTCAGGAGCTGCAGCACCT...AGGCTTTGGCCTGGTGGAGCTAGAGGAAATGCCATGTTTGTGTGGGACTTCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192248.2 |
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| CDS-3UTR TCA 90 bp | GTCCCACACAAACATGGCATTTCCTCTAGCTCCACCAGGCCAAAGCCTCAGAGCGTGTCGTTTTCTGTCTaGACTCTTCATTCAGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: VPHKHGISSSSTRPKPQSVSFSV*TLHSAG Trigger: ACCTGCTGAATGAAGAGTTCAGACAGAAAACGACAC...GCTCTGAGGCTTTGGCCTGGTGGAGCTAGAGGAAATGCCATGTTTGTGTGGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192248.2 |
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| CDS-3UTR GCA 90 bp | GGCCATTGGAATAGTTTCAACTCAGGGATAGGTCTGGAAGCACACAGGAAGCACCCGCTACCTTCTCGATaGCCTCATGGTACTTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: GHWNSFNSGIGLEAHRKHPLPSR*PHGTSP Trigger: TGGAGAAGTACCATGAGGGCATCGAGAAGGTAGCGG...GTGCTTCCTGTGTGCTTCCAGACCTATCCCTGAGTTGAAACTATTCCAATGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028000.13 ENSMUST00000111368.8 |
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| CDS-3UTR GCA 90 bp | AAACATGGCATTTCCTCTAGCTCCACCAGGCCAAAGCCTCAGAGCCGCAGTGGGTCTTCGAGAGGTTTTTaGCATCTGCTCCTGTTAATA | + |
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Preference number: 4 (lower is better) Translates to: KHGISSSSTRPKPQSRSGSSRGF*HLLLLI Trigger: TATTAACAGGAGCAGATGGCAAAAACCTCTCGAAGA...CCCACTGCGGCTCTGAGGCTTTGGCCTGGTGGAGCTAGAGGAAATGCCATGTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000192248.2 |
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| CDS-3UTR TCA 90 bp | CTTCAATATAACTATGCCAAACAGAAGCAGAAAGGCAGCAGGCCGTTTCCAGAAAACTGCACCTCCAGCTaGCAGGAAGGCAAGCAATCC | + |
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Preference number: 4 (lower is better) Translates to: LQYNYAKQKQKGSRPFPENCTSS*QEGKQS Trigger: GGATTGCTTGCCTTCCTGTCAGCTGGAGGTGCAGTT...TTCTGGAAACGGCCTGCTGCCTTTCTGCTTCTGTTTGGCATAGTTATATTGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028000.13 ENSMUST00000111368.8 |
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| CDS-3UTR CCA 90 bp | CACACAAACATGGCATTTCCTCTAGCTCCACCAGGCCAAAGCCTCAGAGCCGCACAGCTACATTGTATCTaGGGAATGACAAAGTTTCCA | + |
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Preference number: 4 (lower is better) Translates to: HTNMAFPLAPPGQSLRAAQLHCI*GMTKFP Trigger: TGGAAACTTTGTCATTCCCCAGATACAATGTAGCTG...TGCGGCTCTGAGGCTTTGGCCTGGTGGAGCTAGAGGAAATGCCATGTTTGTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192248.2 |
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| CDS-3UTR TCA 90 bp | TGCAAGGCCCTGAGTTGTATCTCCATCAGAGTTTATGTCAGCTGTATCAGCTGTAGGTGCTGCAGCTCCTaGATGTCATCCATAAACTGC | + |
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Preference number: 4 (lower is better) Translates to: CKALSCISIRVYVSCISCRCCSS*MSSINC Trigger: GCAGTTTATGGATGACATTCAGGAGCTGCAGCACCT...ACAGCTGATACAGCTGACATAAACTCTGATGGAGATACAACTCAGGGCCTTGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028000.13 ENSMUST00000111368.8 |
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| CDS-3UTR GCA 90 bp | GGCCATTGGAATAGTTTCAACTCAGGGATAGGTCTGGAAGCACACAGGAAGCACTTGGCATATTCCTCCTaGAGCAGTGTCGTTTTCTGT | + |
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Preference number: 4 (lower is better) Translates to: GHWNSFNSGIGLEAHRKHLAYSS*SSVVFC Trigger: ACAGAAAACGACACTGCTGCAGGAGGAATATGCCAA...GTGCTTCCTGTGTGCTTCCAGACCTATCCCTGAGTTGAAACTATTCCAATGGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028000.13 ENSMUST00000111368.8 |
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| CDS-3UTR CCA 90 bp | GATGAAGTCCCACACAAACATGGCATTTCCTCTAGCTCCACCAGGCCAAAGCCTGTTCTTCAGCTTCTCTaGAGAGTCCACAATTTTGCT | + |
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Preference number: 4 (lower is better) Translates to: DEVPHKHGISSSSTRPKPVLQLL*RVHNFA Trigger: AGCAAAATTGTGGACTCTCCAGAGAAGCTGAAGAAC...AGGCTTTGGCCTGGTGGAGCTAGAGGAAATGCCATGTTTGTGTGGGACTTCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192248.2 |
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| CDS-3UTR GCA 90 bp | ATACTCCATTGTAACTGTACCACATTTTCTGTATCCATTCCTCTGCTGAGGAGCCCGCTACCTTCTCGATaGCCTCATGGTACTTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: ILHCNCTTFSVSIPLLRSPLPSR*PHGTSP Trigger: TGGAGAAGTACCATGAGGGCATCGAGAAGGTAGCGG...GCTCCTCAGCAGAGGAATGGATACAGAAAATGTGGTACAGTTACAATGGAGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111368.8 |
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| CDS-3UTR CCA 90 bp | GGCCATTGGAATAGTTTCAACTCAGGGATAGGTCTGGAAGCACACAGGAAGCACGTTCTTCAGCTTCTCTaGAGAGTCCACAATTTTGCT | + |
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Preference number: 4 (lower is better) Translates to: GHWNSFNSGIGLEAHRKHVLQLL*RVHNFA Trigger: AGCAAAATTGTGGACTCTCCAGAGAAGCTGAAGAAC...GTGCTTCCTGTGTGCTTCCAGACCTATCCCTGAGTTGAAACTATTCCAATGGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028000.13 ENSMUST00000111368.8 |
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| CDS-3UTR CCA 90 bp | TGGAGCATGTGTCCTTATTACCAGTTGGAACATCTTCAATTTTGGTGGCAGTTCCCATCACTTTTTCCCTaGCACTGCGGAGCTTCTGGA | + |
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Preference number: 4 (lower is better) Translates to: WSMCPYYQLEHLQFWWQFPSLFP*HCGASG Trigger: TCCAGAAGCTCCGCAGTGCCAGGGAAAAAGTGATGG...GAACTGCCACCAAAATTGAAGATGTTCCAACTGGTAATAAGGACACATGCTCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111368.8 |
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| CDS-3UTR CCA 90 bp | AGTTGTATCTCCATCAGAGTTTATGTCAGCTGTATCAGCTGTAGTCGTTGGGCCTTCTCGATGCCCTCATaGTACTTCTCCAGAGCACTT | + |
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Preference number: 4 (lower is better) Translates to: SCISIRVYVSCISCSRWAFSMPS*YFSRAL Trigger: AAGTGCTCTGGAGAAGTACCATGAGGGCATCGAGAA...GGCCCAACGACTACAGCTGATACAGCTGACATAAACTCTGATGGAGATACAACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028000.13 ENSMUST00000111368.8 |
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| CDS-3UTR TCA 90 bp | TATGCCAAACAGAAGCAGAAAGGCAGCAGGCCGTTTCCAGAAGGGCTGTTGTTGAATTTATTGCGAATATaGACCACAAGCTCAGCTACA | + |
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Preference number: 4 (lower is better) Translates to: YAKQKQKGSRPFPEGLLLNLLRI*TTSSAT Trigger: TGTAGCTGAGCTTGTGGTTCATATTCGCAATAAATT...CAACAACAGCCCTTCTGGAAACGGCCTGCTGCCTTTCTGCTTCTGTTTGGCATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028000.13 ENSMUST00000111368.8 |
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| CDS-3UTR TCA 90 bp | GATGAAGTCCCACACAAACATGGCATTTCCTCTAGCTCCACCAGGCCAAAGCCTCACGTTTCTCTGAAGTaGATAAAGTTGATAATGCCA | + |
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Preference number: 4 (lower is better) Translates to: DEVPHKHGISSSSTRPKPHVSLK*IKLIMP Trigger: TGGCATTATCAACTTTATTCACTTCAGAGAAACGTG...AGGCTTTGGCCTGGTGGAGCTAGAGGAAATGCCATGTTTGTGTGGGACTTCATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192248.2 |
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| CDS-3UTR TCA 90 bp | GCCCTGAGTTGTATCTCCATCAGAGTTTATGTCAGCTGTATCAGCTGTAGTCGTCAGCCGGAACGGTATTaGGTTTTTCCAGTTTCATCA | + |
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Preference number: 4 (lower is better) Translates to: ALSCISIRVYVSCISCSRQPERY*VFPVSS Trigger: TGATGAAACTGGAAAAACTCAATACCGTTCCGGCTG...ACGACTACAGCTGATACAGCTGACATAAACTCTGATGGAGATACAACTCAGGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028000.13 ENSMUST00000111368.8 |
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| CDS-3UTR TCA 90 bp | ATGCAAGGCCCTGAGTTGTATCTCCATCAGAGTTTATGTCAGCTGTATCAGCTGGTGTCGTTTTCTGTCTaGACTCTTCATTCAGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: MQGPELYLHQSLCQLYQLVSFSV*TLHSAG Trigger: ACCTGCTGAATGAAGAGTTCAGACAGAAAACGACAC...CAGCTGATACAGCTGACATAAACTCTGATGGAGATACAACTCAGGGCCTTGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028000.13 ENSMUST00000111368.8 |
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| CDS-3UTR TCA 90 bp | TATGCCAAACAGAAGCAGAAAGGCAGCAGGCCGTTTCCAGAAGGGCTGTTGTTGTTTACAAAGATCTCCTaGGACTTCAATATCTCCCTT | + |
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Preference number: 4 (lower is better) Translates to: YAKQKQKGSRPFPEGLLLFTKIS*DFNISL Trigger: AAGGGAGATATTGAAGTCTCAGGAGATCTTTGTAAA...CAACAACAGCCCTTCTGGAAACGGCCTGCTGCCTTTCTGCTTCTGTTTGGCATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028000.13 ENSMUST00000111368.8 |
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| CDS-3UTR GCA 90 bp | AGCATGCAAGGCCCTGAGTTGTATCTCCATCAGAGTTTATGTCAGCTGTATCAGATCAAAGCTTCCTGGTaGACATTGCTTAACTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: SMQGPELYLHQSLCQLYQIKASW*TLLNCC Trigger: GCAGCAGTTAAGCAATGTGCACCAGGAAGCTTTGAT...CTGATACAGCTGACATAAACTCTGATGGAGATACAACTCAGGGCCTTGCATGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028000.13 ENSMUST00000111368.8 |
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| CDS-3UTR GCA 90 bp | TGCAAGGCCCTGAGTTGTATCTCCATCAGAGTTTATGTCAGCTGTATCAGCTGTTTGGCATATTCCTCCTaGAGCAGTGTCGTTTTCTGT | + |
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Preference number: 4 (lower is better) Translates to: CKALSCISIRVYVSCISCLAYSS*SSVVFC Trigger: ACAGAAAACGACACTGCTGCAGGAGGAATATGCCAA...ACAGCTGATACAGCTGACATAAACTCTGATGGAGATACAACTCAGGGCCTTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028000.13 ENSMUST00000111368.8 |
||
| CDS-3UTR GCA 90 bp | TGTAGCATGCAAGGCCCTGAGTTGTATCTCCATCAGAGTTTATGTCAGCTGTATATGTCATCCATAAACTaGTTGAACTCCTCTCGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: CSMQGPELYLHQSLCQLYMSSIN*LNSSRS Trigger: GGAGCGAGAGGAGTTCAAGCAGTTTATGGATGACAT...ATACAGCTGACATAAACTCTGATGGAGATACAACTCAGGGCCTTGCATGCTACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028000.13 ENSMUST00000111368.8 |
||
| CDS-3UTR GCA 90 bp | TATGCCAAACAGAAGCAGAAAGGCAGCAGGCCGTTTCCAGAAGGGCTGTTGTTGTCTCCTTTAAGAGACTaGTTAGTTTCTCCCTATTAT | + |
|
Preference number: 4 (lower is better) Translates to: YAKQKQKGSRPFPEGLLLSPLRD*LVSPYY Trigger: ATAATAGGGAGAAACTAAGCAGTCTCTTAAAGGAGA...CAACAACAGCCCTTCTGGAAACGGCCTGCTGCCTTTCTGCTTCTGTTTGGCATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028000.13 ENSMUST00000111368.8 |
||
| CDS-3UTR TCA 90 bp | TGTAGCATGCAAGGCCCTGAGTTGTATCTCCATCAGAGTTTATGTCAGCTGTATAAAAGAACAAACTTCTaGCTGGTAAGAAGCCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: CSMQGPELYLHQSLCQLYKRTNF*LVRSPP Trigger: TGGAGGGCTTCTTACCAGTCAGAAGTTTGTTCTTTT...ATACAGCTGACATAAACTCTGATGGAGATACAACTCAGGGCCTTGCATGCTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028000.13 ENSMUST00000111368.8 |
||
| CDS-3UTR GCA 90 bp | AGTTGTATCTCCATCAGAGTTTATGTCAGCTGTATCAGCTGTAGTCGTTGGGCCTCTTCGAGAGGTTTTTaGCATCTGCTCCTGTTAATA | + |
|
Preference number: 4 (lower is better) Translates to: SCISIRVYVSCISCSRWASSRGF*HLLLLI Trigger: TATTAACAGGAGCAGATGGCAAAAACCTCTCGAAGA...GGCCCAACGACTACAGCTGATACAGCTGACATAAACTCTGATGGAGATACAACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028000.13 ENSMUST00000111368.8 |
||
| CDS-3UTR GCA 90 bp | TGGAGCATGTGTCCTTATTACCAGTTGGAACATCTTCAATTTTGGTGGCAGTTCATCAAAGCTTCCTGGTaGACATTGCTTAACTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: WSMCPYYQLEHLQFWWQFIKASW*TLLNCC Trigger: GCAGCAGTTAAGCAATGTGCACCAGGAAGCTTTGAT...GAACTGCCACCAAAATTGAAGATGTTCCAACTGGTAATAAGGACACATGCTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111368.8 |
||
| CDS-3UTR CCA 90 bp | ATGCAAGGCCCTGAGTTGTATCTCCATCAGAGTTTATGTCAGCTGTATCAGCTGTATCGGATTTCATTTTaGCATATTCCTCCTGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: MQGPELYLHQSLCQLYQLYRISF*HIPPAA Trigger: TGCTGCAGGAGGAATATGCCAAAATGAAATCCGATA...CAGCTGATACAGCTGACATAAACTCTGATGGAGATACAACTCAGGGCCTTGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028000.13 ENSMUST00000111368.8 |
||
| CDS-3UTR CCA 90 bp | CGTTATTTGAATTGTAGTAAAAGTCTATACAATACATGGCATGTTGGAGCCTGGCCATCACTTTTTCCCTaGCACTGCGGAGCTTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: RYLNCSKSLYNTWHVGAWPSLFP*HCGASG Trigger: TCCAGAAGCTCCGCAGTGCCAGGGAAAAAGTGATGG...CCAGGCTCCAACATGCCATGTATTGTATAGACTTTTACTACAATTCAAATAACG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028000.13 ENSMUST00000111368.8 |
||
| CDS-3UTR CCA 90 bp | TGTAGCATGCAAGGCCCTGAGTTGTATCTCCATCAGAGTTTATGTCAGCTGTATGAATCACTTTCAATCTaGTCCTCCAAGTTCAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: CSMQGPELYLHQSLCQLYESLSI*SSKFKL Trigger: GAGCTTGAACTTGGAGGACCAGATTGAAAGTGATTC...ATACAGCTGACATAAACTCTGATGGAGATACAACTCAGGGCCTTGCATGCTACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028000.13 ENSMUST00000111368.8 |
||
| CDS-3UTR CCA 90 bp | GCCCTGAGTTGTATCTCCATCAGAGTTTATGTCAGCTGTATCAGCTGTAGTCGTTGCAGTCTTCAATCATaGCCTGCTTGTAATGTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: ALSCISIRVYVSCISCSRCSLQS*PACNVS Trigger: TGAAACATTACAAGCAGGCCATGATTGAAGACTGCA...ACGACTACAGCTGATACAGCTGACATAAACTCTGATGGAGATACAACTCAGGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028000.13 ENSMUST00000111368.8 |
||
| CDS-3UTR TCA 90 bp | GCCCTGAGTTGTATCTCCATCAGAGTTTATGTCAGCTGTATCAGCTGTAGTCGTTTAAATGTGGATATGTaGCTTCTATGTTCATCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: ALSCISIRVYVSCISCSRLNVDM*LLCSSA Trigger: TGCCGATGAACATAGAAGTCACATATCCACATTTAA...ACGACTACAGCTGATACAGCTGACATAAACTCTGATGGAGATACAACTCAGGGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028000.13 ENSMUST00000111368.8 |
||
| CDS-3UTR TCA 90 bp | TGCAAGGCCCTGAGTTGTATCTCCATCAGAGTTTATGTCAGCTGTATCAGCTGTTTAAATGTGGATATGTaGCTTCTATGTTCATCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: CKALSCISIRVYVSCISCLNVDM*LLCSSA Trigger: TGCCGATGAACATAGAAGTCACATATCCACATTTAA...ACAGCTGATACAGCTGACATAAACTCTGATGGAGATACAACTCAGGGCCTTGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028000.13 ENSMUST00000111368.8 |
||
| CDS-3UTR TCA 90 bp | CGTTATTTGAATTGTAGTAAAAGTCTATACAATACATGGCATGTTGGAGCCTGGAGGTGCTGCAGCTCCTaGATGTCATCCATAAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: RYLNCSKSLYNTWHVGAWRCCSS*MSSINC Trigger: GCAGTTTATGGATGACATTCAGGAGCTGCAGCACCT...CCAGGCTCCAACATGCCATGTATTGTATAGACTTTTACTACAATTCAAATAACG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028000.13 ENSMUST00000111368.8 |
||
| CDS-3UTR TCA 90 bp | GAGGAGCATCTAGGTTCTTTCCAACTTCAGGCTAATATAAATAAGGCTGCTATGGTGTCGTTTTCTGTCTaGACTCTTCATTCAGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: EEHLGSFQLQANINKAAMVSFSV*TLHSAG Trigger: ACCTGCTGAATGAAGAGTTCAGACAGAAAACGACAC...CATAGCAGCCTTATTTATATTAGCCTGAAGTTGGAAAGAACCTAGATGCTCCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111368.8 |
||
| CDS-3UTR TCA 90 bp | CTTCAATATAACTATGCCAAACAGAAGCAGAAAGGCAGCAGGCCGTTTCCAGAAATCTGCAAGGTCCTGTaGTTTCTTTTGATACAACTG | + |
|
Preference number: 4 (lower is better) Translates to: LQYNYAKQKQKGSRPFPEICKVL*FLLIQL Trigger: CAGTTGTATCAAAAGAAATCACAGGACCTTGCAGAT...TTCTGGAAACGGCCTGCTGCCTTTCTGCTTCTGTTTGGCATAGTTATATTGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028000.13 ENSMUST00000111368.8 |
||
| CDS-3UTR TCA 90 bp | TGCAAGGCCCTGAGTTGTATCTCCATCAGAGTTTATGTCAGCTGTATCAGCTGTCAGTCGTCATTCTTATaGGAGAATTTTCTTCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: CKALSCISIRVYVSCISCQSSFL*ENFLQS Trigger: AGACTGAAGAAAATTCTCTCATAAGAATGACGACTG...ACAGCTGATACAGCTGACATAAACTCTGATGGAGATACAACTCAGGGCCTTGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028000.13 ENSMUST00000111368.8 |
||
| CDS-3UTR GCA 90 bp | TGTAGCATGCAAGGCCCTGAGTTGTATCTCCATCAGAGTTTATGTCAGCTGTATTCTTCGAGAGGTTTTTaGCATCTGCTCCTGTTAATA | + |
|
Preference number: 4 (lower is better) Translates to: CSMQGPELYLHQSLCQLYSSRGF*HLLLLI Trigger: TATTAACAGGAGCAGATGGCAAAAACCTCTCGAAGA...ATACAGCTGACATAAACTCTGATGGAGATACAACTCAGGGCCTTGCATGCTACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028000.13 ENSMUST00000111368.8 |
||
| CDS-3UTR GCA 90 bp | GAGCATGTGTCCTTATTACCAGTTGGAACATCTTCAATTTTGGTGGCAGTTCAAATGTCATCCATAAACTaGTTGAACTCCTCTCGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: EHVSLLPVGTSSILVAVQMSSIN*LNSSRS Trigger: GGAGCGAGAGGAGTTCAAGCAGTTTATGGATGACAT...TTGAACTGCCACCAAAATTGAAGATGTTCCAACTGGTAATAAGGACACATGCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111368.8 |
||
| CDS-3UTR CCA 90 bp | GCCCTGAGTTGTATCTCCATCAGAGTTTATGTCAGCTGTATCAGCTGTAGTCGTTGTCCGGTTTGTTCTTaGATTAAGAATGTCGACAAT | + |
|
Preference number: 4 (lower is better) Translates to: ALSCISIRVYVSCISCSRCPVCS*IKNVDN Trigger: ATTGTCGACATTCTTAATCCAAGAACAAACCGGACA...ACGACTACAGCTGATACAGCTGACATAAACTCTGATGGAGATACAACTCAGGGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028000.13 ENSMUST00000111368.8 |
||
| CDS-3UTR CCA 90 bp | AGTTGTATCTCCATCAGAGTTTATGTCAGCTGTATCAGCTGTAGTCGTTGGGCCTGTCCGGTTTGTTCTTaGATTAAGAATGTCGACAAT | + |
|
Preference number: 4 (lower is better) Translates to: SCISIRVYVSCISCSRWACPVCS*IKNVDN Trigger: ATTGTCGACATTCTTAATCCAAGAACAAACCGGACA...GGCCCAACGACTACAGCTGATACAGCTGACATAAACTCTGATGGAGATACAACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028000.13 ENSMUST00000111368.8 |
||
| CDS-3UTR CCA 90 bp | CTTCAATATAACTATGCCAAACAGAAGCAGAAAGGCAGCAGGCCGTTTCCAGAATATCGGATTTCATTTTaGCATATTCCTCCTGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LQYNYAKQKQKGSRPFPEYRISF*HIPPAA Trigger: TGCTGCAGGAGGAATATGCCAAAATGAAATCCGATA...TTCTGGAAACGGCCTGCTGCCTTTCTGCTTCTGTTTGGCATAGTTATATTGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028000.13 ENSMUST00000111368.8 |
||
| CDS-3UTR CCA 90 bp | AACTGTGTACCATGTGTAATACCTTTCTGCTCTAACCCTTGCGTGATGAAGTCCTATCGGATTTCATTTTaGCATATTCCTCCTGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: NCVPCVIPFCSNPCVMKSYRISF*HIPPAA Trigger: TGCTGCAGGAGGAATATGCCAAAATGAAATCCGATA...GGACTTCATCACGCAAGGGTTAGAGCAGAAAGGTATTACACATGGTACACAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192248.2 |
||
| CDS-3UTR CCA 90 bp | AGTAAAAGTCTATACAATACATGGCATGTTGGAGCCTGGGAAAGCAAGTCAGTGGAATCACTTTCAATCTaGTCCTCCAAGTTCAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SKSLYNTWHVGAWESKSVESLSI*SSKFKL Trigger: GAGCTTGAACTTGGAGGACCAGATTGAAAGTGATTC...CACTGACTTGCTTTCCCAGGCTCCAACATGCCATGTATTGTATAGACTTTTACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028000.13 ENSMUST00000111368.8 |
||
| CDS-3UTR TCA 90 bp | AACTGTGTACCATGTGTAATACCTTTCTGCTCTAACCCTTGCGTGATGAAGTCCTTAAATGTGGATATGTaGCTTCTATGTTCATCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: NCVPCVIPFCSNPCVMKSLNVDM*LLCSSA Trigger: TGCCGATGAACATAGAAGTCACATATCCACATTTAA...GGACTTCATCACGCAAGGGTTAGAGCAGAAAGGTATTACACATGGTACACAGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192248.2 |
||
| CDS-3UTR TCA 90 bp | GAGGAGCATCTAGGTTCTTTCCAACTTCAGGCTAATATAAATAAGGCTGCTATGAAAAGAACAAACTTCTaGCTGGTAAGAAGCCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: EEHLGSFQLQANINKAAMKRTNF*LVRSPP Trigger: TGGAGGGCTTCTTACCAGTCAGAAGTTTGTTCTTTT...CATAGCAGCCTTATTTATATTAGCCTGAAGTTGGAAAGAACCTAGATGCTCCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111368.8 |
||
| CDS-3UTR TCA 90 bp | TGTAGCATGCAAGGCCCTGAGTTGTATCTCCATCAGAGTTTATGTCAGCTGTATCACGTTTCTCTGAAGTaGATAAAGTTGATAATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: CSMQGPELYLHQSLCQLYHVSLK*IKLIMP Trigger: TGGCATTATCAACTTTATTCACTTCAGAGAAACGTG...ATACAGCTGACATAAACTCTGATGGAGATACAACTCAGGGCCTTGCATGCTACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028000.13 ENSMUST00000111368.8 |
||
| CDS-3UTR TCA 90 bp | TGGAGCATGTGTCCTTATTACCAGTTGGAACATCTTCAATTTTGGTGGCAGTTCATCTGCAAGGTCCTGTaGTTTCTTTTGATACAACTG | + |
|
Preference number: 4 (lower is better) Translates to: WSMCPYYQLEHLQFWWQFICKVL*FLLIQL Trigger: CAGTTGTATCAAAAGAAATCACAGGACCTTGCAGAT...GAACTGCCACCAAAATTGAAGATGTTCCAACTGGTAATAAGGACACATGCTCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111368.8 |
||
| CDS-3UTR TCA 90 bp | TGTAGCATGCAAGGCCCTGAGTTGTATCTCCATCAGAGTTTATGTCAGCTGTATATCTTGTGGATTTCTTaGTTAACAGTGGTTACTTGC | + |
|
Preference number: 4 (lower is better) Translates to: CSMQGPELYLHQSLCQLYILWIS*LTVVTC Trigger: GCAAGTAACCACTGTTAATCAAGAAATCCACAAGAT...ATACAGCTGACATAAACTCTGATGGAGATACAACTCAGGGCCTTGCATGCTACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028000.13 ENSMUST00000111368.8 |
||
| CDS-3UTR GCA 90 bp | GCCCTGAGTTGTATCTCCATCAGAGTTTATGTCAGCTGTATCAGCTGTAGTCGTTGTTTCACATCCTCCTaGTTCTTGTTGATTTTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: ALSCISIRVYVSCISCSRCFTSS*FLLILN Trigger: ATTCAAAATCAACAAGAAGCAGGAGGATGTGAAACA...ACGACTACAGCTGATACAGCTGACATAAACTCTGATGGAGATACAACTCAGGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028000.13 ENSMUST00000111368.8 |
||
| CDS-3UTR CCA 90 bp | GAGGAGCATCTAGGTTCTTTCCAACTTCAGGCTAATATAAATAAGGCTGCTATGGTTCTTCAGCTTCTCTaGAGAGTCCACAATTTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: EEHLGSFQLQANINKAAMVLQLL*RVHNFA Trigger: AGCAAAATTGTGGACTCTCCAGAGAAGCTGAAGAAC...CATAGCAGCCTTATTTATATTAGCCTGAAGTTGGAAAGAACCTAGATGCTCCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111368.8 |
||
| CDS-3UTR CCA 90 bp | AATATGAATGGCCATTGGAATAGTTTCAACTCAGGGATAGGTCTGGAAGCACACTGCAGTCTTCAATCATaGCCTGCTTGTAATGTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: NMNGHWNSFNSGIGLEAHCSLQS*PACNVS Trigger: TGAAACATTACAAGCAGGCCATGATTGAAGACTGCA...GTGTGCTTCCAGACCTATCCCTGAGTTGAAACTATTCCAATGGCCATTCATATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028000.13 ENSMUST00000111368.8 |
||
| CDS-3UTR CCA 90 bp | CGTTATTTGAATTGTAGTAAAAGTCTATACAATACATGGCATGTTGGAGCCTGGTTCTCGATGCCCTCATaGTACTTCTCCAGAGCACTT | + |
|
Preference number: 4 (lower is better) Translates to: RYLNCSKSLYNTWHVGAWFSMPS*YFSRAL Trigger: AAGTGCTCTGGAGAAGTACCATGAGGGCATCGAGAA...CCAGGCTCCAACATGCCATGTATTGTATAGACTTTTACTACAATTCAAATAACG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028000.13 ENSMUST00000111368.8 |
||
| CDS-3UTR TCA 90 bp | AATATGAATGGCCATTGGAATAGTTTCAACTCAGGGATAGGTCTGGAAGCACACCACGTTTCTCTGAAGTaGATAAAGTTGATAATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: NMNGHWNSFNSGIGLEAHHVSLK*IKLIMP Trigger: TGGCATTATCAACTTTATTCACTTCAGAGAAACGTG...GTGTGCTTCCAGACCTATCCCTGAGTTGAAACTATTCCAATGGCCATTCATATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028000.13 ENSMUST00000111368.8 |
||
| CDS-3UTR TCA 90 bp | CGTTATTTGAATTGTAGTAAAAGTCTATACAATACATGGCATGTTGGAGCCTGGCAGCCGGAACGGTATTaGGTTTTTCCAGTTTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: RYLNCSKSLYNTWHVGAWQPERY*VFPVSS Trigger: TGATGAAACTGGAAAAACTCAATACCGTTCCGGCTG...CCAGGCTCCAACATGCCATGTATTGTATAGACTTTTACTACAATTCAAATAACG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028000.13 ENSMUST00000111368.8 |
||
| CDS-3UTR TCA 90 bp | AATATGAATGGCCATTGGAATAGTTTCAACTCAGGGATAGGTCTGGAAGCACACTTTACAAAGATCTCCTaGGACTTCAATATCTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: NMNGHWNSFNSGIGLEAHFTKIS*DFNISL Trigger: AAGGGAGATATTGAAGTCTCAGGAGATCTTTGTAAA...GTGTGCTTCCAGACCTATCCCTGAGTTGAAACTATTCCAATGGCCATTCATATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028000.13 ENSMUST00000111368.8 |
||
| CDS-3UTR CCA 90 bp | GAGCATGTGTCCTTATTACCAGTTGGAACATCTTCAATTTTGGTGGCAGTTCAACAGCTACATTGTATCTaGGGAATGACAAAGTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: EHVSLLPVGTSSILVAVQQLHCI*GMTKFP Trigger: TGGAAACTTTGTCATTCCCCAGATACAATGTAGCTG...TTGAACTGCCACCAAAATTGAAGATGTTCCAACTGGTAATAAGGACACATGCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111368.8 |
||
| CDS-3UTR GCA 90 bp | AGTAAAAGTCTATACAATACATGGCATGTTGGAGCCTGGGAAAGCAAGTCAGTGTCTCCTTTAAGAGACTaGTTAGTTTCTCCCTATTAT | + |
|
Preference number: 4 (lower is better) Translates to: SKSLYNTWHVGAWESKSVSPLRD*LVSPYY Trigger: ATAATAGGGAGAAACTAAGCAGTCTCTTAAAGGAGA...CACTGACTTGCTTTCCCAGGCTCCAACATGCCATGTATTGTATAGACTTTTACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028000.13 ENSMUST00000111368.8 |
||
| CDS-3UTR GCA 90 bp | GAGTTCAGTATCTATTTATTCCAACCAGTACATAGAAAAAGAGAGAGAGTAGGGTTAACAGTGGTTACTTaGTCACAGACAGCATCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: EFSIYLFQPVHRKRERVGLTVVT*SQTASL Trigger: GAGAGATGCTGTCTGTGAGCAAGTAACCACTGTTAA...CCCTACTCTCTCTCTTTTTCTATGTACTGGTTGGAATAAATAGATACTGAACTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028000.13 ENSMUST00000111368.8 |
||
| CDS-3UTR CCA 90 bp | AGTAAAAGTCTATACAATACATGGCATGTTGGAGCCTGGGAAAGCAAGTCAGTGATATCTCCCTTTTCTTaGTATCTCTCAGTTGTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SKSLYNTWHVGAWESKSVISPFS*YLSVVE Trigger: TTCAACAACTGAGAGATACCAAGAAAAGGGAGATAT...CACTGACTTGCTTTCCCAGGCTCCAACATGCCATGTATTGTATAGACTTTTACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028000.13 ENSMUST00000111368.8 |
||
| CDS-3UTR CCA 90 bp | TCTAAGCTCTTCCAGCCTTGTAATAGAACTAATATGAATGGCCATTGGAATAGTCAGCTACATTGTATCTaGGGAATGACAAAGTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SKLFQPCNRTNMNGHWNSQLHCI*GMTKFP Trigger: TGGAAACTTTGTCATTCCCCAGATACAATGTAGCTG...ACTATTCCAATGGCCATTCATATTAGTTCTATTACAAGGCTGGAAGAGCTTAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028000.13 ENSMUST00000111368.8 |
||
| CDS-3UTR TCA 90 bp | AAGCTCTTCCAGCCTTGTAATAGAACTAATATGAATGGCCATTGGAATAGTTTCATCTTGTGGATTTCTTaGTTAACAGTGGTTACTTGC | + |
|
Preference number: 4 (lower is better) Translates to: KLFQPCNRTNMNGHWNSFILWIS*LTVVTC Trigger: GCAAGTAACCACTGTTAATCAAGAAATCCACAAGAT...GAAACTATTCCAATGGCCATTCATATTAGTTCTATTACAAGGCTGGAAGAGCTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028000.13 ENSMUST00000111368.8 |
||
| CDS-3UTR CCA 90 bp | CGTTATTTGAATTGTAGTAAAAGTCTATACAATACATGGCATGTTGGAGCCTGGATATCTCCCTTTTCTTaGTATCTCTCAGTTGTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: RYLNCSKSLYNTWHVGAWISPFS*YLSVVE Trigger: TTCAACAACTGAGAGATACCAAGAAAAGGGAGATAT...CCAGGCTCCAACATGCCATGTATTGTATAGACTTTTACTACAATTCAAATAACG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028000.13 ENSMUST00000111368.8 |
||
| 3UTR CAA 72 bp | CATGTGTCCTTATTACCAGTTGGAACATCTTCAATTTaGGTGGCAGTTCAAATTTTTGCTAATAAGTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: HVSLLPVGTSSI*VAVQIFANKSS Trigger: TGAAGACTTATTAGCAAAAATTTGAACTGCCACCAAAATTGAAGATGTTCCAACTGGTAATAAGGACACATG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111368.8 |
||
| CDS-3UTR CAA 90 bp | CAGTGGGATCCACGGCTGTCCTGCGCTTGCATTCTTCCCCTCTACCCCACACACCTCTTCGAGAGGTTTTaGCCATCTGCTCCTGTTAAT | + |
|
Preference number: 5 (lower is better) Translates to: QWDPRLSCACILPLYPTHLFERF*PSAPVN Trigger: ATTAACAGGAGCAGATGGCAAAAACCTCTCGAAGAG...GTGTGTGGGGTAGAGGGGAAGAATGCAAGCGCAGGACAGCCGTGGATCCCACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000192248.2 |
||
| CDS-3UTR CAA 90 bp | CGCAGTGGGATCCACGGCTGTCCTGCGCTTGCATTCTTCCCCTCTACCCCACACATATCGGATTTCATTTaGGCATATTCCTCCTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RSGIHGCPALAFFPSTPHISDFI*AYSSCS Trigger: GCTGCAGGAGGAATATGCCAAAATGAAATCCGATAT...GTGTGGGGTAGAGGGGAAGAATGCAAGCGCAGGACAGCCGTGGATCCCACTGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192248.2 |
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| CDS-3UTR CAA 90 bp | AACATGGCATTTCCTCTAGCTCCACCAGGCCAAAGCCTCAGAGCCGCAGTGGGATCAGCCGGAACGGTATaGAGTTTTTCCAGTTTCATC | + |
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Preference number: 5 (lower is better) Translates to: NMAFPLAPPGQSLRAAVGSAGTV*SFSSFI Trigger: GATGAAACTGGAAAAACTCAATACCGTTCCGGCTGA...TCCCACTGCGGCTCTGAGGCTTTGGCCTGGTGGAGCTAGAGGAAATGCCATGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000192248.2 |
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| CDS-3UTR CAA 90 bp | ACAAACATGGCATTTCCTCTAGCTCCACCAGGCCAAAGCCTCAGAGCCGCAGTGACAAGCTCAGCTACATaGTATCTGGGGAATGACAAA | + |
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Preference number: 5 (lower is better) Translates to: TNMAFPLAPPGQSLRAAVTSSAT*YLGNDK Trigger: TTTGTCATTCCCCAGATACAATGTAGCTGAGCTTGT...CACTGCGGCTCTGAGGCTTTGGCCTGGTGGAGCTAGAGGAAATGCCATGTTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192248.2 |
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| CDS-3UTR CAA 90 bp | TATGCCAAACAGAAGCAGAAAGGCAGCAGGCCGTTTCCAGAAGGGCTGTTGTTGACAAGCTCAGCTACATaGTATCTGGGGAATGACAAA | + |
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Preference number: 5 (lower is better) Translates to: YAKQKQKGSRPFPEGLLLTSSAT*YLGNDK Trigger: TTTGTCATTCCCCAGATACAATGTAGCTGAGCTTGT...CAACAACAGCCCTTCTGGAAACGGCCTGCTGCCTTTCTGCTTCTGTTTGGCATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028000.13 ENSMUST00000111368.8 |
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| CDS-3UTR CAA 90 bp | GCCCTGAGTTGTATCTCCATCAGAGTTTATGTCAGCTGTATCAGCTGTAGTCGTTCCTCCTGCTTCTTGTaGATTTTGAATCGCGCGGTG | + |
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Preference number: 5 (lower is better) Translates to: ALSCISIRVYVSCISCSRSSCFL*ILNRAV Trigger: CACCGCGCGATTCAAAATCAACAAGAAGCAGGAGGA...ACGACTACAGCTGATACAGCTGACATAAACTCTGATGGAGATACAACTCAGGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028000.13 ENSMUST00000111368.8 |
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| CDS-3UTR CAA 90 bp | AGTTGTATCTCCATCAGAGTTTATGTCAGCTGTATCAGCTGTAGTCGTTGGGCCACATCCTCCTGCTTCTaGTTGATTTTGAATCGCGCG | + |
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Preference number: 5 (lower is better) Translates to: SCISIRVYVSCISCSRWATSSCF*LILNRA Trigger: CGCGCGATTCAAAATCAACAAGAAGCAGGAGGATGT...GGCCCAACGACTACAGCTGATACAGCTGACATAAACTCTGATGGAGATACAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028000.13 ENSMUST00000111368.8 |
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| CDS-3UTR CAA 90 bp | TGCAAGGCCCTGAGTTGTATCTCCATCAGAGTTTATGTCAGCTGTATCAGCTGTCTCTTCGAGAGGTTTTaGCCATCTGCTCCTGTTAAT | + |
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Preference number: 5 (lower is better) Translates to: CKALSCISIRVYVSCISCLFERF*PSAPVN Trigger: ATTAACAGGAGCAGATGGCAAAAACCTCTCGAAGAG...ACAGCTGATACAGCTGACATAAACTCTGATGGAGATACAACTCAGGGCCTTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028000.13 ENSMUST00000111368.8 |
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| CDS-3UTR CAA 90 bp | AGCATGCAAGGCCCTGAGTTGTATCTCCATCAGAGTTTATGTCAGCTGTATCAGTCAGCCGGAACGGTATaGAGTTTTTCCAGTTTCATC | + |
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Preference number: 5 (lower is better) Translates to: SMQGPELYLHQSLCQLYQSAGTV*SFSSFI Trigger: GATGAAACTGGAAAAACTCAATACCGTTCCGGCTGA...CTGATACAGCTGACATAAACTCTGATGGAGATACAACTCAGGGCCTTGCATGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028000.13 ENSMUST00000111368.8 |
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| CDS-3UTR CAA 90 bp | AGTAAAAGTCTATACAATACATGGCATGTTGGAGCCTGGGAAAGCAAGTCAGTGTCCTCCTGCTTCTTGTaGATTTTGAATCGCGCGGTG | + |
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Preference number: 5 (lower is better) Translates to: SKSLYNTWHVGAWESKSVSSCFL*ILNRAV Trigger: CACCGCGCGATTCAAAATCAACAAGAAGCAGGAGGA...CACTGACTTGCTTTCCCAGGCTCCAACATGCCATGTATTGTATAGACTTTTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028000.13 ENSMUST00000111368.8 |
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| CDS-3UTR CAA 90 bp | AGTTGTATCTCCATCAGAGTTTATGTCAGCTGTATCAGCTGTAGTCGTTGGGCCATTAACAGTGGTTACTaGCTCACAGACAGCATCTCT | + |
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Preference number: 5 (lower is better) Translates to: SCISIRVYVSCISCSRWAINSGY*LTDSIS Trigger: AGAGATGCTGTCTGTGAGCAAGTAACCACTGTTAAT...GGCCCAACGACTACAGCTGATACAGCTGACATAAACTCTGATGGAGATACAACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028000.13 ENSMUST00000111368.8 |
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| CDS GCA 90 bp | AATCTCTATAGATATCATACTGCTCCATCACTTTTTCCCTGGCACTaGGGAGCTTCTGGACGGTGCCTTTCATCTTGTCTTTATAGTTCT | + |
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Preference number: 5 (lower is better) Translates to: NLYRYHTAPSLFPWH*GASGRCLSSCLYSS Trigger: AGAACTATAAAGACAAGATGAAAGGCACCGTCCAGAAGCTCCGCAGTGCCAGGGAAAAAGTGATGGAGCAGTATGATATCTATAGAGATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028000.13 ENSMUST00000111368.8 ENSMUST00000195342.6 |
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| CDS CCA 90 bp | TCAGCCGGAACGGTATTGAGTTTTTCCAGTTTCATCAAAGCTTCCTaGTGCACATTGCTTAACTGCTGCATTCTGACCATAGAGGATTTA | + |
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Preference number: 5 (lower is better) Translates to: SAGTVLSFSSFIKAS*CTLLNCCILTIEDL Trigger: TAAATCCTCTATGGTCAGAATGCAGCAGTTAAGCAATGTGCACCAGGAAGCTTTGATGAAACTGGAAAAACTCAATACCGTTCCGGCTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028000.13 ENSMUST00000111368.8 ENSMUST00000192248.2 |
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| CDS-3UTR CAA 90 bp | CTTCAATATAACTATGCCAAACAGAAGCAGAAAGGCAGCAGGCCGTTTCCAGAAATATCGGATTTCATTTaGGCATATTCCTCCTGCAGC | + |
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Preference number: 5 (lower is better) Translates to: LQYNYAKQKQKGSRPFPEISDFI*AYSSCS Trigger: GCTGCAGGAGGAATATGCCAAAATGAAATCCGATAT...TTCTGGAAACGGCCTGCTGCCTTTCTGCTTCTGTTTGGCATAGTTATATTGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028000.13 ENSMUST00000111368.8 |
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| CDS GCA 90 bp | GCCGGAACGGTATTGAGTTTTTCCAGTTTCATCAAAGCTTCCTGGTaGACATTGCTTAACTGCTGCATTCTGACCATAGAGGATTTATTT | + |
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Preference number: 5 (lower is better) Translates to: AGTVLSFSSFIKASW*TLLNCCILTIEDLF Trigger: AAATAAATCCTCTATGGTCAGAATGCAGCAGTTAAGCAATGTGCACCAGGAAGCTTTGATGAAACTGGAAAAACTCAATACCGTTCCGGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028000.13 ENSMUST00000111368.8 ENSMUST00000192248.2 |
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| CDS-3UTR CAA 90 bp | TGGAGCATGTGTCCTTATTACCAGTTGGAACATCTTCAATTTTGGTGGCAGTTCACAAGCTCAGCTACATaGTATCTGGGGAATGACAAA | + |
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Preference number: 5 (lower is better) Translates to: WSMCPYYQLEHLQFWWQFTSSAT*YLGNDK Trigger: TTTGTCATTCCCCAGATACAATGTAGCTGAGCTTGT...GAACTGCCACCAAAATTGAAGATGTTCCAACTGGTAATAAGGACACATGCTCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111368.8 |
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| CDS-3UTR CAA 90 bp | GAGTTCAGTATCTATTTATTCCAACCAGTACATAGAAAAAGAGAGAGAGTAGGGACATCCTCCTGCTTCTaGTTGATTTTGAATCGCGCG | + |
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Preference number: 5 (lower is better) Translates to: EFSIYLFQPVHRKRERVGTSSCF*LILNRA Trigger: CGCGCGATTCAAAATCAACAAGAAGCAGGAGGATGT...CCCTACTCTCTCTCTTTTTCTATGTACTGGTTGGAATAAATAGATACTGAACTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028000.13 ENSMUST00000111368.8 |
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| CDS GCA 90 bp | TGCACATTGCTTAACTGCTGCATTCTGACCATAGAGGATTTATTTTaGAAAAGAAATTCTTCACACTTCTCCAGGCACGTTTCTCTGAAG | + |
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Preference number: 5 (lower is better) Translates to: CTLLNCCILTIEDLF*KRNSSHFSRHVSLK Trigger: CTTCAGAGAAACGTGCCTGGAGAAGTGTGAAGAATTTCTTTTGCAAAATAAATCCTCTATGGTCAGAATGCAGCAGTTAAGCAATGTGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028000.13 ENSMUST00000111368.8 ENSMUST00000192248.2 |
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| CDS CCA 90 bp | TCTTCAGTCTTCAGTTTCTTTAGTTCCGATGAATCACTTTCAATCTaGTCCTCCAAGTTCAAGCTCTCCTTTAAGAGACTGCTTAGTTTC | + |
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Preference number: 5 (lower is better) Translates to: SSVFSFFSSDESLSI*SSKFKLSFKRLLSF Trigger: GAAACTAAGCAGTCTCTTAAAGGAGAGCTTGAACTTGGAGGACCAGATTGAAAGTGATTCATCGGAACTAAAGAAACTGAAGACTGAAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028000.13 ENSMUST00000111368.8 |
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| CDS-3UTR CAA 90 bp | TCTAAGCTCTTCCAGCCTTGTAATAGAACTAATATGAATGGCCATTGGAATAGTTCAGCCGGAACGGTATaGAGTTTTTCCAGTTTCATC | + |
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Preference number: 5 (lower is better) Translates to: SKLFQPCNRTNMNGHWNSSAGTV*SFSSFI Trigger: GATGAAACTGGAAAAACTCAATACCGTTCCGGCTGA...ACTATTCCAATGGCCATTCATATTAGTTCTATTACAAGGCTGGAAGAGCTTAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028000.13 ENSMUST00000111368.8 |
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| CDS TCA 90 bp | GAGAGGTTTTTGCCATCTGCTCCTGTTAATAATTTATTGCGAATATaGACCACAAGCTCAGCTACATTGTATCTGGGGAATGACAAAGTT | + |
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Preference number: 5 (lower is better) Translates to: ERFLPSAPVNNLLRI*TTSSATLYLGNDKV Trigger: AACTTTGTCATTCCCCAGATACAATGTAGCTGAGCTTGTGGTTCATATTCGCAATAAATTATTAACAGGAGCAGATGGCAAAAACCTCTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028000.13 ENSMUST00000111368.8 ENSMUST00000192248.2 |
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| CDS-3UTR CAA 90 bp | CGTTATTTGAATTGTAGTAAAAGTCTATACAATACATGGCATGTTGGAGCCTGGATATCGGATTTCATTTaGGCATATTCCTCCTGCAGC | + |
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Preference number: 5 (lower is better) Translates to: RYLNCSKSLYNTWHVGAWISDFI*AYSSCS Trigger: GCTGCAGGAGGAATATGCCAAAATGAAATCCGATAT...CCAGGCTCCAACATGCCATGTATTGTATAGACTTTTACTACAATTCAAATAACG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028000.13 ENSMUST00000111368.8 |
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| CDS-3UTR CAA 90 bp | TCTAAGCTCTTCCAGCCTTGTAATAGAACTAATATGAATGGCCATTGGAATAGTATTAACAGTGGTTACTaGCTCACAGACAGCATCTCT | + |
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Preference number: 5 (lower is better) Translates to: SKLFQPCNRTNMNGHWNSINSGY*LTDSIS Trigger: AGAGATGCTGTCTGTGAGCAAGTAACCACTGTTAAT...ACTATTCCAATGGCCATTCATATTAGTTCTATTACAAGGCTGGAAGAGCTTAGA 39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028000.13 ENSMUST00000111368.8 |
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| CDS CCA 72 bp | GCGCTGCGCTCCTCCGCTACCTTCTCGATGCCCTCATaGTACTTCTCCAGAGCACTTTTCAGGTTTACAAAG | + |
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Preference number: 6 (lower is better) Translates to: ALRSSATFSMPS*YFSRALFRFTK Trigger: CTTTGTAAACCTGAAAAGTGCTCTGGAGAAGTACCATGAGGGCATCGAGAAGGTAGCGGAGGAGCGCAGCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028000.13 ENSMUST00000111368.8 |
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| CDS CAA 90 bp | TCCATAAACTGCTTGAACTCCTCTCGCTCCTCAGCCGGAACGGTATaGAGTTTTTCCAGTTTCATCAAAGCTTCCTGGTGCACATTGCTT | + |
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Preference number: 6 (lower is better) Translates to: SINCLNSSRSSAGTV*SFSSFIKASWCTLL Trigger: AAGCAATGTGCACCAGGAAGCTTTGATGAAACTGGAAAAACTCAATACCGTTCCGGCTGAGGAGCGAGAGGAGTTCAAGCAGTTTATGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028000.13 ENSMUST00000111368.8 ENSMUST00000192248.2 |
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| CDS GCA 72 bp | TCTGGTCCTCCAAGTTCAAGCTCTCCTTTAAGAGACTaGTTAGTTTCTCCCTATTATCTGCAAGGTCCTGTG | + |
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Preference number: 6 (lower is better) Translates to: SGPPSSSSPLRD*LVSPYYLQGPV Trigger: CACAGGACCTTGCAGATAATAGGGAGAAACTAAGCAGTCTCTTAAAGGAGAGCTTGAACTTGGAGGACCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028000.13 ENSMUST00000111368.8 ENSMUST00000195342.6 |
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| CDS CAA 90 bp | GTAAGGCTTTCATGTAAATCATGTACAAGACATCAGACTTCGGATTaGGAAGAAAATCGCTCTTCGAGAGGTTTTTGCCATCTGCTCCTG | + |
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Preference number: 6 (lower is better) Translates to: VRLSCKSCTRHQTSD*EENRSSRGFCHLLL Trigger: CAGGAGCAGATGGCAAAAACCTCTCGAAGAGCGATTTTCTTCCAAATCCGAAGTCTGATGTCTTGTACATGATTTACATGAAAGCCTTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028000.13 ENSMUST00000111368.8 ENSMUST00000192248.2 |
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| CDS GCA 72 bp | TCTGAAATATCGGATTTCATTTTGGCATATTCCTCCTaGAGCAGTGTCGTTTTCTGTCTGAACTCTTCATTC | + |
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Preference number: 6 (lower is better) Translates to: SEISDFILAYSS*SSVVFCLNSSF Trigger: GAATGAAGAGTTCAGACAGAAAACGACACTGCTGCAGGAGGAATATGCCAAAATGAAATCCGATATTTCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028000.13 ENSMUST00000111368.8 ENSMUST00000192248.2 |
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| CDS GCA 72 bp | GCTCACAGACAGCATCTCTCTTTTCTTGAACTTTATTaGAGTCTTCAATCATGGCCTGCTTGTAATGTTTCA | + |
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Preference number: 6 (lower is better) Translates to: AHRQHLSFLELY*SLQSWPACNVS Trigger: TGAAACATTACAAGCAGGCCATGATTGAAGACTGCAATAAAGTTCAAGAAAAGAGAGATGCTGTCTGTGAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028000.13 ENSMUST00000111368.8 |
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| CDS CCA 72 bp | TTCAGTTTCTTTAGTTCCGATGAATCACTTTCAATCTaGTCCTCCAAGTTCAAGCTCTCCTTTAAGAGACTG | + |
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Preference number: 6 (lower is better) Translates to: FSFFSSDESLSI*SSKFKLSFKRL Trigger: CAGTCTCTTAAAGGAGAGCTTGAACTTGGAGGACCAGATTGAAAGTGATTCATCGGAACTAAAGAAACTGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028000.13 ENSMUST00000111368.8 ENSMUST00000195342.6 |
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| CDS CAA 72 bp | AGTTTTTCCAGTTTCATCAAAGCTTCCTGGTGCACATaGCTTAACTGCTGCATTCTGACCATAGAGGATTTA | + |
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Preference number: 6 (lower is better) Translates to: SFSSFIKASWCT*LNCCILTIEDL Trigger: TAAATCCTCTATGGTCAGAATGCAGCAGTTAAGCAATGTGCACCAGGAAGCTTTGATGAAACTGGAAAAACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028000.13 ENSMUST00000111368.8 ENSMUST00000192248.2 |
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| CDS CAA 90 bp | ACGGTATTGAGTTTTTCCAGTTTCATCAAAGCTTCCTGGTGCACATaGCTTAACTGCTGCATTCTGACCATAGAGGATTTATTTTGCAAA | + |
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Preference number: 6 (lower is better) Translates to: TVLSFSSFIKASWCT*LNCCILTIEDLFCK Trigger: TTTGCAAAATAAATCCTCTATGGTCAGAATGCAGCAGTTAAGCAATGTGCACCAGGAAGCTTTGATGAAACTGGAAAAACTCAATACCGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028000.13 ENSMUST00000111368.8 ENSMUST00000192248.2 |
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| CDS TCA 72 bp | TTGCCATCTGCTCCTGTTAATAATTTATTGCGAATATaGACCACAAGCTCAGCTACATTGTATCTGGGGAAT | + |
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Preference number: 6 (lower is better) Translates to: LPSAPVNNLLRI*TTSSATLYLGN Trigger: ATTCCCCAGATACAATGTAGCTGAGCTTGTGGTTCATATTCGCAATAAATTATTAACAGGAGCAGATGGCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028000.13 ENSMUST00000111368.8 ENSMUST00000192248.2 |
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| CDS GCA 72 bp | TTCATCAAAGCTTCCTGGTGCACATTGCTTAACTGCTaGATTCTGACCATAGAGGATTTATTTTGCAAAAGA | + |
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Preference number: 6 (lower is better) Translates to: FIKASWCTLLNC*ILTIEDLFCKR Trigger: TCTTTTGCAAAATAAATCCTCTATGGTCAGAATGCAGCAGTTAAGCAATGTGCACCAGGAAGCTTTGATGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028000.13 ENSMUST00000111368.8 ENSMUST00000192248.2 |
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| CDS GCA 72 bp | AGTTTCATCAAAGCTTCCTGGTGCACATTGCTTAACTaGTGCATTCTGACCATAGAGGATTTATTTTGCAAA | + |
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Preference number: 6 (lower is better) Translates to: SFIKASWCTLLN*CILTIEDLFCK Trigger: TTTGCAAAATAAATCCTCTATGGTCAGAATGCAGCAGTTAAGCAATGTGCACCAGGAAGCTTTGATGAAACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028000.13 ENSMUST00000111368.8 ENSMUST00000192248.2 |
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| CDS CAA 72 bp | TCATGTAAATCATGTACAAGACATCAGACTTCGGATTaGGAAGAAAATCGCTCTTCGAGAGGTTTTTGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: SCKSCTRHQTSD*EENRSSRGFCH Trigger: ATGGCAAAAACCTCTCGAAGAGCGATTTTCTTCCAAATCCGAAGTCTGATGTCTTGTACATGATTTACATGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028000.13 ENSMUST00000111368.8 ENSMUST00000192248.2 |
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| CDS CAA 72 bp | TTCGGATTTGGAAGAAAATCGCTCTTCGAGAGGTTTTaGCCATCTGCTCCTGTTAATAATTTATTGCGAATA | + |
|
Preference number: 6 (lower is better) Translates to: FGFGRKSLFERF*PSAPVNNLLRI Trigger: TATTCGCAATAAATTATTAACAGGAGCAGATGGCAAAAACCTCTCGAAGAGCGATTTTCTTCCAAATCCGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028000.13 ENSMUST00000111368.8 ENSMUST00000192248.2 |
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| CDS CAA 90 bp | AATTGCAGATTTAATCTTGTGGATTTCTTGATTAACAGTGGTTACTaGCTCACAGACAGCATCTCTCTTTTCTTGAACTTTATTGCAGTC | + |
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Preference number: 6 (lower is better) Translates to: NCRFNLVDFLINSGY*LTDSISLFLNFIAV Trigger: GACTGCAATAAAGTTCAAGAAAAGAGAGATGCTGTCTGTGAGCAAGTAACCACTGTTAATCAAGAAATCCACAAGATTAAATCTGCAATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028000.13 ENSMUST00000111368.8 |
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