Pregenerated sensors for NUDT9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029310Ensembl transcript IDs: ENSMUST00000031250.14, ENSMUST00000128511.8, ENSMUST00000134313.8, ENSMUST00000148261.2, ENSMUST00000150226.8
Found 43 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATCCAGGCATTTCACCCTGTTGCAAGCATTTCCAGGTGGCCTCTGTaGGGTGTCAGTTCTGTGGCCCTTCTGTCTGCAGTACAGCCTGCA | + |
|
Preference number: 1 (lower is better) Translates to: IQAFHPVASISRWPL*GVSSVALLSAVQPA Trigger: TGCAGGCTGTACTGCAGACAGAAGGGCCACAGAACTGACACCCCACAGAGGCCACCTGGAAATGCTTGCAACAGGGTGAAATGCCTGGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031250.14 |
||
| 3UTR-3UTR GCA 90 bp | CGTATCCAGGCATTTCACCCTGTTGCAAGCATTTCCAGGTGGCCTCTGTGGGGTGTCTGCAGTACAGCCTaGAGCGGCTGGCTCACGGGG | + |
|
Preference number: 2 (lower is better) Translates to: RIQAFHPVASISRWPLWGVCSTA*SGWLTG Trigger: CCCCGTGAGCCAGCCGCTGCAGGCTGTACTGCAGAC...ACCCCACAGAGGCCACCTGGAAATGCTTGCAACAGGGTGAAATGCCTGGATACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031250.14 |
||
| 3UTR-3UTR GCA 90 bp | CCTTTGAGAAGAAAGCTGTACATTCAGGGTTCTTCATCGTATCCAGGCATTTCATGTGGCCCTTCTGTCTaGAGTACAGCCTGCAGCGGC | + |
|
Preference number: 2 (lower is better) Translates to: PLRRKLYIQGSSSYPGISCGPSV*STACSG Trigger: GCCGCTGCAGGCTGTACTGCAGACAGAAGGGCCACA...TGAAATGCCTGGATACGATGAAGAACCCTGAATGTACAGCTTTCTTCTCAAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031250.14 |
||
| 3UTR CCA 72 bp | ATCCAGGCATTTCACCCTGTTGCAAGCATTTCCAGGTaGCCTCTGTGGGGTGTCAGTTCTGTGGCCCTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: IQAFHPVASISR*PLWGVSSVALL Trigger: CAGAAGGGCCACAGAACTGACACCCCACAGAGGCCACCTGGAAATGCTTGCAACAGGGTGAAATGCCTGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031250.14 |
||
| 3UTR GCA 72 bp | CAGGGTTCTTCATCGTATCCAGGCATTTCACCCTGTTaGAAGCATTTCCAGGTGGCCTCTGTGGGGTGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: QGSSSYPGISPC*KHFQVASVGCQ Trigger: CTGACACCCCACAGAGGCCACCTGGAAATGCTTGCAACAGGGTGAAATGCCTGGATACGATGAAGAACCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031250.14 |
||
| 3UTR CCA 72 bp | TTTCACCCTGTTGCAAGCATTTCCAGGTGGCCTCTGTaGGGTGTCAGTTCTGTGGCCCTTCTGTCTGCAGTA | + |
|
Preference number: 3 (lower is better) Translates to: FHPVASISRWPL*GVSSVALLSAV Trigger: TACTGCAGACAGAAGGGCCACAGAACTGACACCCCACAGAGGCCACCTGGAAATGCTTGCAACAGGGTGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031250.14 |
||
| CDS-3UTR CCA 90 bp | AGGCATTTCACCCTGTTGCAAGCATTTCCAGGTGGCCTCTGTGGGGTGTCAGTTCGGCTGTCAGCGGCGTaGTCCTCGCTCCAGTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RHFTLLQAFPGGLCGVSVRLSAA*SSLQWA Trigger: TGCCCACTGGAGCGAGGACCACGCCGCTGACAGCCG...AACTGACACCCCACAGAGGCCACCTGGAAATGCTTGCAACAGGGTGAAATGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031250.14 |
||
| CDS-3UTR CCA 90 bp | CCTGTTGCAAGCATTTCCAGGTGGCCTCTGTGGGGTGTCAGTTCTGTGGCCCTTTTGGAAATGTGTTTCTaGGTGCGGGGACGGCGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: PVASISRWPLWGVSSVALLEMCF*VRGRRG Trigger: GCCGCGCCGTCCCCGCACCCAGAAACACATTTCCAA...AAGGGCCACAGAACTGACACCCCACAGAGGCCACCTGGAAATGCTTGCAACAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031250.14 |
||
| CDS-3UTR TCA 90 bp | TCACCCTGTTGCAAGCATTTCCAGGTGGCCTCTGTGGGGTGTCAGTTCTGTGGCATAGGATCTGCGGCATaGTTTGGGCCCCATCTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: SPCCKHFQVASVGCQFCGIGSAA*FGPHLP Trigger: GGGGAGATGGGGCCCAAATCATGCCGCAGATCCTAT...GCCACAGAACTGACACCCCACAGAGGCCACCTGGAAATGCTTGCAACAGGGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031250.14 |
||
| CDS-3UTR CCA 90 bp | CGTATCCAGGCATTTCACCCTGTTGCAAGCATTTCCAGGTGGCCTCTGTGGGGTTGGTCCTCGCTCCAGTaGGCATCTCGTTTCTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: RIQAFHPVASISRWPLWGWSSLQ*ASRFSA Trigger: GGCAGAGAAACGAGATGCCCACTGGAGCGAGGACCA...ACCCCACAGAGGCCACCTGGAAATGCTTGCAACAGGGTGAAATGCCTGGATACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031250.14 |
||
| CDS-3UTR CCA 90 bp | AGGCATTTCACCCTGTTGCAAGCATTTCCAGGTGGCCTCTGTGGGGTGTCAGTTGCGTACAACTTGAGCTaGTCGCTGATGTCCACCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RHFTLLQAFPGGLCGVSVAYNLS*SLMSTH Trigger: GTGGGTGGACATCAGCGACCAGCTCAAGTTGTACGC...AACTGACACCCCACAGAGGCCACCTGGAAATGCTTGCAACAGGGTGAAATGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031250.14 |
||
| CDS-3UTR CCA 90 bp | TTTCACCCTGTTGCAAGCATTTCCAGGTGGCCTCTGTGGGGTGTCAGTTCTGTGGTCCGGGCCTTGTTGTaGGAATTCTCTTTGGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: FHPVASISRWPLWGVSSVVRALL*EFSLAP Trigger: TGGTGCCAAAGAGAATTCCCACAACAAGGCCCGGAC...CACAGAACTGACACCCCACAGAGGCCACCTGGAAATGCTTGCAACAGGGTGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031250.14 |
||
| 3UTR CAA 72 bp | TCAGGGTTCTTCATCGTATCCAGGCATTTCACCCTGTaGCAAGCATTTCCAGGTGGCCTCTGTGGGGTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SGFFIVSRHFTL*QAFPGGLCGVS Trigger: TGACACCCCACAGAGGCCACCTGGAAATGCTTGCAACAGGGTGAAATGCCTGGATACGATGAAGAACCCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031250.14 |
||
| CDS-3UTR GCA 90 bp | TTCACCCTGTTGCAAGCATTTCCAGGTGGCCTCTGTGGGGTGTCAGTTCTGTGGGGTTATAATAGGATCTaGGGCATGATTTGGGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: FTLLQAFPGGLCGVSVLWGYNRI*GMIWAP Trigger: TGGGGCCCAAATCATGCCGCAGATCCTATTATAACC...CCACAGAACTGACACCCCACAGAGGCCACCTGGAAATGCTTGCAACAGGGTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031250.14 |
||
| CDS-3UTR CCA 90 bp | GCATTTCACCCTGTTGCAAGCATTTCCAGGTGGCCTCTGTGGGGTGTCAGTTCTGTGGAACCCACAGGTTaGAAATGTGTTTCTGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: AFHPVASISRWPLWGVSSVEPTG*KCVSGC Trigger: GCACCCAGAAACACATTTCCAACCTGTGGGTTCCAC...AGAACTGACACCCCACAGAGGCCACCTGGAAATGCTTGCAACAGGGTGAAATGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031250.14 |
||
| CDS-3UTR GCA 90 bp | CATCGTATCCAGGCATTTCACCCTGTTGCAAGCATTTCCAGGTGGCCTCTGTGGGGCATCTCGTTTCTCTaGCACGAGTTTGATGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: HRIQAFHPVASISRWPLWGISFL*HEFDEL Trigger: CAGTTCATCAAACTCGTGGCAGAGAAACGAGATGCC...CCACAGAGGCCACCTGGAAATGCTTGCAACAGGGTGAAATGCCTGGATACGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031250.14 |
||
| CDS-3UTR CCA 90 bp | TTCACCCTGTTGCAAGCATTTCCAGGTGGCCTCTGTGGGGTGTCAGTTCTGTGGATGTTGGCGTTAAGGTaGAACCCACAGGTTGGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: FTLLQAFPGGLCGVSVLWMLALR*NPQVGN Trigger: ATTTCCAACCTGTGGGTTCCACCTTAACGCCAACAT...CCACAGAACTGACACCCCACAGAGGCCACCTGGAAATGCTTGCAACAGGGTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031250.14 |
||
| CDS-3UTR GCA 90 bp | AAAGCTGTACATTCAGGGTTCTTCATCGTATCCAGGCATTTCACCCTGTTGCAACAGTCCTGTCCTCCCTaGAGGGTTTCTGGGTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: KAVHSGFFIVSRHFTLLQQSCPP*RVSGSS Trigger: GGAAGACCCAGAAACCCTGCAGGGAGGACAGGACTG...TTGCAACAGGGTGAAATGCCTGGATACGATGAAGAACCCTGAATGTACAGCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031250.14 |
||
| CDS-3UTR GCA 90 bp | TTCACCCTGTTGCAAGCATTTCCAGGTGGCCTCTGTGGGGTGTCAGTTCTGTGGCTCTTTCTCTCAACATaGCCGTCCTTTTCATTAAAC | + |
|
Preference number: 4 (lower is better) Translates to: FTLLQAFPGGLCGVSVLWLFLST*PSFSLN Trigger: GTTTAATGAAAAGGACGGGCATGTTGAGAGAAAGAG...CCACAGAACTGACACCCCACAGAGGCCACCTGGAAATGCTTGCAACAGGGTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031250.14 |
||
| CDS-3UTR TCA 90 bp | AATCCCTTTGAGAAGAAAGCTGTACATTCAGGGTTCTTCATCGTATCCAGGCATTTTTCAGGGTGGCACTaGTCTTCTCTCCGGGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: NPFEKKAVHSGFFIVSRHFSGWH*SSLRGP Trigger: TGGACCCCGGAGAGAAGATCAGTGCCACCCTGAAAA...ATGCCTGGATACGATGAAGAACCCTGAATGTACAGCTTTCTTCTCAAAGGGATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031250.14 |
||
| CDS-3UTR TCA 90 bp | GAAAGCTGTACATTCAGGGTTCTTCATCGTATCCAGGCATTTCACCCTGTTGCAACTTCGCTCGACTTTTaGACCTGGGTAAGGAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: ESCTFRVLHRIQAFHPVATSLDF*TWVRRS Trigger: ACTTCTCCTTACCCAGGTTCAAAAGTCGAGCGAAGT...TGCAACAGGGTGAAATGCCTGGATACGATGAAGAACCCTGAATGTACAGCTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031250.14 |
||
| CDS-3UTR GCA 90 bp | GAAGAAAGCTGTACATTCAGGGTTCTTCATCGTATCCAGGCATTTCACCCTGTTTTATATATCACGAGATaGTCTTGGCTGAAGAGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: EESCTFRVLHRIQAFHPVLYITR*SWLKSA Trigger: CGCGCTCTTCAGCCAAGAGCATCTCGTGATATATAA...AACAGGGTGAAATGCCTGGATACGATGAAGAACCCTGAATGTACAGCTTTCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031250.14 |
||
| CDS-3UTR CCA 90 bp | GAAGAAAGCTGTACATTCAGGGTTCTTCATCGTATCCAGGCATTTCACCCTGTTTCATACAGGCCATTCTaGCTCTTTCTCTCAACATGC | + |
|
Preference number: 4 (lower is better) Translates to: EESCTFRVLHRIQAFHPVSYRPF*LFLSTC Trigger: GCATGTTGAGAGAAAGAGCCAGAATGGCCTGTATGA...AACAGGGTGAAATGCCTGGATACGATGAAGAACCCTGAATGTACAGCTTTCTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031250.14 |
||
| CDS-3UTR CCA 90 bp | TCTAATCCCTTTGAGAAGAAAGCTGTACATTCAGGGTTCTTCATCGTATCCAGGTCCCTGCAGGGTTTCTaGGTCTTCCGTTTTCAATCT | + |
|
Preference number: 4 (lower is better) Translates to: SNPFEKKAVHSGFFIVSRSLQGF*VFRFQS Trigger: AGATTGAAAACGGAAGACCCAGAAACCCTGCAGGGA...CCTGGATACGATGAAGAACCCTGAATGTACAGCTTTCTTCTCAAAGGGATTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031250.14 |
||
| CDS CCA 90 bp | CGCCCACTGGGGTCCAGCCAGGACAGAGACCGCGGTGTACTCCACTaGGTTGTAGTCCTGCCACTCAACGAGCCAGCCCACCTTCTCATT | + |
|
Preference number: 5 (lower is better) Translates to: RPLGSSQDRDRGVLH*VVVLPLNEPAHLLI Trigger: AATGAGAAGGTGGGCTGGCTCGTTGAGTGGCAGGACTACAACCCAGTGGAGTACACCGCGGTCTCTGTCCTGGCTGGACCCCAGTGGGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000031250.14 ENSMUST00000128511.8 ENSMUST00000134313.8 ENSMUST00000148261.2 ENSMUST00000150226.8 |
||
| CDS GCA 90 bp | GTACAACTTGAGCTGGTCGCTGATGTCCACCCACTTCACCTTCCCTaGGTCATCTCCGGCCTCCAGGGTGAGGTTGTCCATGGTCTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: VQLELVADVHPLHLP*VISGLQGEVVHGLP Trigger: GGGGAGACCATGGACAACCTCACCCTGGAGGCCGGAGATGACGCAGGGAAGGTGAAGTGGGTGGACATCAGCGACCAGCTCAAGTTGTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031250.14 |
||
| CDS-3UTR CAA 90 bp | AGCATTTCCAGGTGGCCTCTGTGGGGTGTCAGTTCTGTGGCCCTTCTGTCTGCAGCCTCCAGGGTGAGGTaGTCCATGGTCTCCCCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: SISRWPLWGVSSVALLSAASRVR*SMVSPV Trigger: AACAGGGGAGACCATGGACAACCTCACCCTGGAGGC...TGCAGACAGAAGGGCCACAGAACTGACACCCCACAGAGGCCACCTGGAAATGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031250.14 |
||
| CDS GCA 90 bp | GCTGTCAGCGGCGTGGTCCTCGCTCCAGTGGGCATCTCGTTTCTCTaGCACGAGTTTGATGAACTGAGAGTGACTGGCGTACAACTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: AVSGVVLAPVGISFL*HEFDELRVTGVQLE Trigger: CTCAAGTTGTACGCCAGTCACTCTCAGTTCATCAAACTCGTGGCAGAGAAACGAGATGCCCACTGGAGCGAGGACCACGCCGCTGACAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031250.14 |
||
| CDS-3UTR CAA 90 bp | GTTGCAAGCATTTCCAGGTGGCCTCTGTGGGGTGTCAGTTCTGTGGCCCTTCTGGGTGGAACCCACAGGTaGGAAATGTGTTTCTGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: VASISRWPLWGVSSVALLGGTHR*EMCFWV Trigger: CACCCAGAAACACATTTCCAACCTGTGGGTTCCACC...CAGAAGGGCCACAGAACTGACACCCCACAGAGGCCACCTGGAAATGCTTGCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031250.14 |
||
| CDS-3UTR CAA 90 bp | TGTTGCAAGCATTTCCAGGTGGCCTCTGTGGGGTGTCAGTTCTGTGGCCCTTCTCCACAGTCTTTCCTCTaGATGGCAACGAACTGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: CCKHFQVASVGCQFCGPSPQSFL*MATNCK Trigger: CTTGCAGTTCGTTGCCATCAAGAGGAAAGACTGTGG...AGAAGGGCCACAGAACTGACACCCCACAGAGGCCACCTGGAAATGCTTGCAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031250.14 |
||
| CDS CCA 90 bp | TTCTCTTTGGCACCATTAGAACCAGACATGATGTTGGCGTTAAGGTaGAACCCACAGGTTGGAAATGTGTTTCTGGGTGCGGGGACGGCG | + |
|
Preference number: 5 (lower is better) Translates to: FSLAPLEPDMMLALR*NPQVGNVFLGAGTA Trigger: CGCCGTCCCCGCACCCAGAAACACATTTCCAACCTGTGGGTTCCACCTTAACGCCAACATCATGTCTGGTTCTAATGGTGCCAAAGAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031250.14 |
||
| CDS-3UTR CAA 90 bp | AGGCATTTCACCCTGTTGCAAGCATTTCCAGGTGGCCTCTGTGGGGTGTCAGTTGACTTCGCTCGACTTTaGAACCTGGGTAAGGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RHFTLLQAFPGGLCGVSVDFARL*NLGKEK Trigger: CTTCTCCTTACCCAGGTTCAAAAGTCGAGCGAAGTC...AACTGACACCCCACAGAGGCCACCTGGAAATGCTTGCAACAGGGTGAAATGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031250.14 |
||
| CDS GCA 90 bp | ACATACCCCTTATATATCACGAGATGCTCTTGGCTGAAGAGCGCGTaGAGTTTCTCCTCGATCTCTCTCTTCTCGGCACTGGACTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: TYPLYITRCSWLKSA*SFSSISLFSALDFC Trigger: ACAGAAGTCCAGTGCCGAGAAGAGAGAGATCGAGGAGAAACTGCACGCGCTCTTCAGCCAAGAGCATCTCGTGATATATAAGGGGTATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031250.14 |
||
| CDS-3UTR CAA 90 bp | AATCCCTTTGAGAAGAAAGCTGTACATTCAGGGTTCTTCATCGTATCCAGGCATGTCTCCATCCACGCATaGTCAGTGTTCCGAGGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: NPFEKKAVHSGFFIVSRHVSIHA*SVFRGS Trigger: CGACCCTCGGAACACTGACAATGCGTGGATGGAGAC...ATGCCTGGATACGATGAAGAACCCTGAATGTACAGCTTTCTTCTCAAAGGGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031250.14 |
||
| CDS-3UTR CAA 90 bp | GAAAGCTGTACATTCAGGGTTCTTCATCGTATCCAGGCATTTCACCCTGTTGCAGAACCAGACATGATGTaGGCGTTAAGGTGGAACCCA | + |
|
Preference number: 5 (lower is better) Translates to: ESCTFRVLHRIQAFHPVAEPDMM*ALRWNP Trigger: TGGGTTCCACCTTAACGCCAACATCATGTCTGGTTC...TGCAACAGGGTGAAATGCCTGGATACGATGAAGAACCCTGAATGTACAGCTTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031250.14 |
||
| CDS-3UTR CAA 90 bp | GGCATTTCACCCTGTTGCAAGCATTTCCAGGTGGCCTCTGTGGGGTGTCAGTTCTCCTTTTCATTAAACTaGGGAGAGAAGTTGCTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: GISPCCKHFQVASVGCQFSFSLN*GEKLLS Trigger: TGAAAGCAACTTCTCTCCCAAGTTTAATGAAAAGGA...GAACTGACACCCCACAGAGGCCACCTGGAAATGCTTGCAACAGGGTGAAATGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031250.14 |
||
| CDS-3UTR CAA 90 bp | CCCTTTGAGAAGAAAGCTGTACATTCAGGGTTCTTCATCGTATCCAGGCATTTCTTGTGGGAATTCTCTTaGGCACCATTAGAACCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: PFEKKAVHSGFFIVSRHFLWEFS*APLEPD Trigger: GTCTGGTTCTAATGGTGCCAAAGAGAATTCCCACAA...GAAATGCCTGGATACGATGAAGAACCCTGAATGTACAGCTTTCTTCTCAAAGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031250.14 |
||
| CDS CCA 72 bp | AGCCCACGGCTGTCAGCGGCGTGGTCCTCGCTCCAGTaGGCATCTCGTTTCTCTGCCACGAGTTTGATGAAC | + |
|
Preference number: 6 (lower is better) Translates to: SPRLSAAWSSLQ*ASRFSATSLMN Trigger: GTTCATCAAACTCGTGGCAGAGAAACGAGATGCCCACTGGAGCGAGGACCACGCCGCTGACAGCCGTGGGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031250.14 |
||
| CDS TCA 72 bp | ACTTCACCTTCCCTGCGTCATCTCCGGCCTCCAGGGTaGGGTTGTCCATGGTCTCCCCTGTTTCATCATGGT | + |
|
Preference number: 6 (lower is better) Translates to: TSPSLRHLRPPG*GCPWSPLFHHG Trigger: ACCATGATGAAACAGGGGAGACCATGGACAACCTCACCCTGGAGGCCGGAGATGACGCAGGGAAGGTGAAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031250.14 |
||
| CDS TCA 72 bp | CGAACTGCAAGATGCATTTCCCAGAGACAGGGTGTGTaGTCTTATTCCCGCTCTCGTCCCTTTTCCACCTGG | + |
|
Preference number: 6 (lower is better) Translates to: RTARCISQRQGV*SYSRSRPFSTW Trigger: CCAGGTGGAAAAGGGACGAGAGCGGGAATAAGATCACACACCCTGTCTCTGGGAAATGCATCTTGCAGTTCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031250.14 ENSMUST00000128511.8 ENSMUST00000134313.8 ENSMUST00000150226.8 |
||
| CDS CCA 72 bp | CGTGCAGTTTCTCCTCGATCTCTCTCTTCTCGGCACTaGACTTCTGTAACGAGTTCAGGGCTTCTTCACCAA | + |
|
Preference number: 6 (lower is better) Translates to: RAVSPRSLSSRH*TSVTSSGLLHQ Trigger: TTGGTGAAGAAGCCCTGAACTCGTTACAGAAGTCCAGTGCCGAGAAGAGAGAGATCGAGGAGAAACTGCACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031250.14 ENSMUST00000150226.8 |
||
| CDS GCA 72 bp | TTATATATCACGAGATGCTCTTGGCTGAAGAGCGCGTaGAGTTTCTCCTCGATCTCTCTCTTCTCGGCACTG | + |
|
Preference number: 6 (lower is better) Translates to: LYITRCSWLKSA*SFSSISLFSAL Trigger: CAGTGCCGAGAAGAGAGAGATCGAGGAGAAACTGCACGCGCTCTTCAGCCAAGAGCATCTCGTGATATATAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031250.14 |
||
| CDS CCA 72 bp | GCACCATTAGAACCAGACATGATGTTGGCGTTAAGGTaGAACCCACAGGTTGGAAATGTGTTTCTGGGTGCG | + |
|
Preference number: 6 (lower is better) Translates to: APLEPDMMLALR*NPQVGNVFLGA Trigger: CGCACCCAGAAACACATTTCCAACCTGTGGGTTCCACCTTAACGCCAACATCATGTCTGGTTCTAATGGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031250.14 |
||