RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NUDT8 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000110949

Ensembl transcript IDs: ENSMUST00000025802.10

Found 39 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR TCA 90 bp AACACTCTTTTAATCGGTTCTGGACTAGCCTGGCCAAATGATGGCAGAGGCACTAGGCCCAGCTCCTCCTaGGTCTCCCGAAGGGCCGTA +
Preference number: 4 (lower is better)
Translates to: NTLLIGSGLAWPNDGRGTRPSSS*VSRRAV
Trigger: TACGGCCCTTCGGGAGACTCAGGAGGAGCTGGGCCT...AGTGCCTCTGCCATCATTTGGCCAGGCTAGTCCAGAACCGATTAAAAGAGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025802.10
CDS-3UTR CCA 90 bp TCAAACACTCTTTTAATCGGTTCTGGACTAGCCTGGCCAAATGATGGCAGAGGCCCCACACGTGCTCCTTaGGCACCTCTAGGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: SNTLLIGSGLAWPNDGRGPTRAP*APLGPA
Trigger: AGCTGGGCCTAGAGGTGCCCAAGGAGCACGTGTGGG...GCCTCTGCCATCATTTGGCCAGGCTAGTCCAGAACCGATTAAAAGAGTGTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025802.10
CDS-3UTR TCA 90 bp TCAAACACTCTTTTAATCGGTTCTGGACTAGCCTGGCCAAATGATGGCAGAGGCCAGGCAGTGTGTAGCTaGAGTGGCCACCCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: SNTLLIGSGLAWPNDGRGQAVCS*SGHPGR
Trigger: TCTGCCAGGGTGGCCACTTCAGCTACACACTGCCTG...GCCTCTGCCATCATTTGGCCAGGCTAGTCCAGAACCGATTAAAAGAGTGTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025802.10
CDS-3UTR GCA 90 bp TCAAACACTCTTTTAATCGGTTCTGGACTAGCCTGGCCAAATGATGGCAGAGGCTTGGGCCTAAGGCTCTaGAGATCCAGTGGGCCCACG +
Preference number: 4 (lower is better)
Translates to: SNTLLIGSGLAWPNDGRGLGLRL*RSSGPT
Trigger: CGTGGGCCCACTGGATCTGCAGAGCCTTAGGCCCAA...GCCTCTGCCATCATTTGGCCAGGCTAGTCCAGAACCGATTAAAAGAGTGTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025802.10
CDS-3UTR CCA 90 bp AACACTCTTTTAATCGGTTCTGGACTAGCCTGGCCAAATGATGGCAGAGGCACTCTGAAGTGGCCACCCTaGCAGAAGTGGGTATACCCC +
Preference number: 4 (lower is better)
Translates to: NTLLIGSGLAWPNDGRGTLKWPP*QKWVYP
Trigger: GGGGTATACCCACTTCTGCCAGGGTGGCCACTTCAG...AGTGCCTCTGCCATCATTTGGCCAGGCTAGTCCAGAACCGATTAAAAGAGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025802.10
CDS-3UTR CCA 90 bp AACACTCTTTTAATCGGTTCTGGACTAGCCTGGCCAAATGATGGCAGAGGCACTCCACCCTGGCAGAAGTaGGTATACCCCTGGTTCTGT +
Preference number: 4 (lower is better)
Translates to: NTLLIGSGLAWPNDGRGTPPWQK*VYPWFC
Trigger: ACAGAACCAGGGGTATACCCACTTCTGCCAGGGTGG...AGTGCCTCTGCCATCATTTGGCCAGGCTAGTCCAGAACCGATTAAAAGAGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025802.10
CDS-3UTR GCA 90 bp TCAAACACTCTTTTAATCGGTTCTGGACTAGCCTGGCCAAATGATGGCAGAGGCACACGGTGTGGTCCATaGAAGAAGACAGGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: SNTLLIGSGLAWPNDGRGTRCGP*KKTGSV
Trigger: CACACTGCCTGTCTTCTTGCATGGACCACACCGTGT...GCCTCTGCCATCATTTGGCCAGGCTAGTCCAGAACCGATTAAAAGAGTGTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025802.10
CDS-3UTR CCA 90 bp TCAAACACTCTTTTAATCGGTTCTGGACTAGCCTGGCCAAATGATGGCAGAGGCAAGTGGGTATACCCCTaGTTCTGTGTCTGCAGCAAG +
Preference number: 4 (lower is better)
Translates to: SNTLLIGSGLAWPNDGRGKWVYP*FCVCSK
Trigger: CTTGCTGCAGACACAGAACCAGGGGTATACCCACTT...GCCTCTGCCATCATTTGGCCAGGCTAGTCCAGAACCGATTAAAAGAGTGTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025802.10
CDS-3UTR CCA 90 bp TCAAACACTCTTTTAATCGGTTCTGGACTAGCCTGGCCAAATGATGGCAGAGGCTGTGTCTGCAGCAAGTaGGCCAGAGACATCTCAAAT +
Preference number: 4 (lower is better)
Translates to: SNTLLIGSGLAWPNDGRGCVCSK*ARDISN
Trigger: ATTTGAGATGTCTCTGGCCCACTTGCTGCAGACACA...GCCTCTGCCATCATTTGGCCAGGCTAGTCCAGAACCGATTAAAAGAGTGTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025802.10
CDS CCA 90 bp TTTCCCGGTCATACACTGGCTGCAGGACACCCCACACGTGCTCCTTaGGCACCTCTAGGCCCAGCTCCTCCTGAGTCTCCCGAAGGGCCG +
Preference number: 5 (lower is better)
Translates to: FPGHTLAAGHPTRAP*APLGPAPPESPEGP
Trigger: CGGCCCTTCGGGAGACTCAGGAGGAGCTGGGCCTAGAGGTGCCCAAGGAGCACGTGTGGGGTGTCCTGCAGCCAGTGTATGACCGGGAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025802.10
CDS TCA 90 bp ACACCCCACACGTGCTCCTTGGGCACCTCTAGGCCCAGCTCCTCCTaGGTCTCCCGAAGGGCCGTATGTATTACATCTTGGTCGTCGGGA +
Preference number: 5 (lower is better)
Translates to: TPHTCSLGTSRPSSS*VSRRAVCITSWSSG
Trigger: TCCCGACGACCAAGATGTAATACATACGGCCCTTCGGGAGACTCAGGAGGAGCTGGGCCTAGAGGTGCCCAAGGAGCACGTGTGGGGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025802.10
CDS GCA 90 bp GCAAGTACTGGGACTATGGTTGCCTTTTCCCGGTCATACACTGGCTaGAGGACACCCCACACGTGCTCCTTGGGCACCTCTAGGCCCAGC +
Preference number: 5 (lower is better)
Translates to: ASTGTMVAFSRSYTG*RTPHTCSLGTSRPS
Trigger: GCTGGGCCTAGAGGTGCCCAAGGAGCACGTGTGGGGTGTCCTGCAGCCAGTGTATGACCGGGAAAAGGCAACCATAGTCCCAGTACTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025802.10
CDS CCA 90 bp GGCTCTGCAGATCCAGTGGGCCCACGTTGGCAAGTACTGGGACTATaGTTGCCTTTTCCCGGTCATACACTGGCTGCAGGACACCCCACA +
Preference number: 5 (lower is better)
Translates to: GSADPVGPRWQVLGL*LPFPGHTLAAGHPT
Trigger: TGTGGGGTGTCCTGCAGCCAGTGTATGACCGGGAAAAGGCAACCATAGTCCCAGTACTTGCCAACGTGGGCCCACTGGATCTGCAGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025802.10
CDS CCA 90 bp GGGCCTAAGGCTCTGCAGATCCAGTGGGCCCACGTTGGCAAGTACTaGGACTATGGTTGCCTTTTCCCGGTCATACACTGGCTGCAGGAC +
Preference number: 5 (lower is better)
Translates to: GPKALQIQWAHVGKY*DYGCLFPVIHWLQD
Trigger: GTCCTGCAGCCAGTGTATGACCGGGAAAAGGCAACCATAGTCCCAGTACTTGCCAACGTGGGCCCACTGGATCTGCAGAGCCTTAGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025802.10
CDS CCA 90 bp CAGGGTGAGCTCAGTGATGACAGCTGTGAGGCCCCAGACACGGTGTaGTCCATGCAAGAAGACAGGCAGTGTGTAGCTGAAGTGGCCACC +
Preference number: 5 (lower is better)
Translates to: QGELSDDSCEAPDTV*SMQEDRQCVAEVAT
Trigger: GGTGGCCACTTCAGCTACACACTGCCTGTCTTCTTGCATGGACCACACCGTGTCTGGGGCCTCACAGCTGTCATCACTGAGCTCACCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025802.10
CDS TCA 90 bp CCCAGACACGGTGTGGTCCATGCAAGAAGACAGGCAGTGTGTAGCTaGAGTGGCCACCCTGGCAGAAGTGGGTATACCCCTGGTTCTGTG +
Preference number: 5 (lower is better)
Translates to: PRHGVVHARRQAVCS*SGHPGRSGYTPGSV
Trigger: CACAGAACCAGGGGTATACCCACTTCTGCCAGGGTGGCCACTTCAGCTACACACTGCCTGTCTTCTTGCATGGACCACACCGTGTCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025802.10
CDS-3UTR CAA 90 bp TCAAACACTCTTTTAATCGGTTCTGGACTAGCCTGGCCAAATGATGGCAGAGGCCCCCACACGTGCTCCTaGGGCACCTCTAGGCCCAGC +
Preference number: 5 (lower is better)
Translates to: SNTLLIGSGLAWPNDGRGPHTCS*GTSRPS
Trigger: GCTGGGCCTAGAGGTGCCCAAGGAGCACGTGTGGGG...GCCTCTGCCATCATTTGGCCAGGCTAGTCCAGAACCGATTAAAAGAGTGTTTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025802.10
CDS GCA 90 bp AAGTGGCCACCCTGGCAGAAGTGGGTATACCCCTGGTTCTGTGTCTaGAGCAAGTGGGCCAGAGACATCTCAAATACTTCATCCACCTCC +
Preference number: 5 (lower is better)
Translates to: KWPPWQKWVYPWFCV*SKWARDISNTSSTS
Trigger: GGAGGTGGATGAAGTATTTGAGATGTCTCTGGCCCACTTGCTGCAGACACAGAACCAGGGGTATACCCACTTCTGCCAGGGTGGCCACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025802.10
CDS CCA 90 bp GGCCGTATGTATTACATCTTGGTCGTCGGGATCACACTTACCGCCTaGGAAACTGACTTCCCCTTTGTGTCTCCCAACCAGGCGACTAGA +
Preference number: 5 (lower is better)
Translates to: GRMYYILVVGITLTA*ETDFPFVSPNQATR
Trigger: TCTAGTCGCCTGGTTGGGAGACACAAAGGGGAAGTCAGTTTCCCAGGCGGTAAGTGTGATCCCGACGACCAAGATGTAATACATACGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025802.10
CDS GCA 90 bp ATCTCAAATACTTCATCCACCTCCTCAAGGTTGGGCCTAAGGCTCTaGAGATCCAGTGGGCCCACGTTGGCAAGTACTGGGACTATGGTT +
Preference number: 5 (lower is better)
Translates to: ISNTSSTSSRLGLRL*RSSGPTLASTGTMV
Trigger: AACCATAGTCCCAGTACTTGCCAACGTGGGCCCACTGGATCTGCAGAGCCTTAGGCCCAACCTTGAGGAGGTGGATGAAGTATTTGAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025802.10
CDS-3UTR CAA 90 bp TCAAACACTCTTTTAATCGGTTCTGGACTAGCCTGGCCAAATGATGGCAGAGGCAAACTGACTTCCCCTTaGTGTCTCCCAACCAGGCGA +
Preference number: 5 (lower is better)
Translates to: SNTLLIGSGLAWPNDGRGKLTSP*CLPTRR
Trigger: TCGCCTGGTTGGGAGACACAAAGGGGAAGTCAGTTT...GCCTCTGCCATCATTTGGCCAGGCTAGTCCAGAACCGATTAAAAGAGTGTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025802.10
CDS-3UTR CAA 90 bp TCAAACACTCTTTTAATCGGTTCTGGACTAGCCTGGCCAAATGATGGCAGAGGCGTACTGGGACTATGGTaGCCTTTTCCCGGTCATACA +
Preference number: 5 (lower is better)
Translates to: SNTLLIGSGLAWPNDGRGVLGLW*PFPGHT
Trigger: TGTATGACCGGGAAAAGGCAACCATAGTCCCAGTAC...GCCTCTGCCATCATTTGGCCAGGCTAGTCCAGAACCGATTAAAAGAGTGTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025802.10
CDS CCA 72 bp CTGCGGCCGCTGCGGGCCGCGAGCGTAACCGGGCAGTaGTCCGTGCTAGCAGCTGCCGGCAGCGCTGCTCGT +
Preference number: 6 (lower is better)
Translates to: LRPLRAASVTGQ*SVLAAAGSAAR
Trigger: ACGAGCAGCGCTGCCGGCAGCTGCTAGCACGGACCACTGCCCGGTTACGCTCGCGGCCCGCAGCGGCCGCAG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025802.10
CDS GCA 72 bp GGGACTATGGTTGCCTTTTCCCGGTCATACACTGGCTaGAGGACACCCCACACGTGCTCCTTGGGCACCTCT +
Preference number: 6 (lower is better)
Translates to: GTMVAFSRSYTG*RTPHTCSLGTS
Trigger: AGAGGTGCCCAAGGAGCACGTGTGGGGTGTCCTGCAGCCAGTGTATGACCGGGAAAAGGCAACCATAGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025802.10
CDS CAA 90 bp GCCCAGCTCCTCCTGAGTCTCCCGAAGGGCCGTATGTATTACATCTaGGTCGTCGGGATCACACTTACCGCCTGGGAAACTGACTTCCCC +
Preference number: 6 (lower is better)
Translates to: AQLLLSLPKGRMYYI*VVGITLTAWETDFP
Trigger: GGGGAAGTCAGTTTCCCAGGCGGTAAGTGTGATCCCGACGACCAAGATGTAATACATACGGCCCTTCGGGAGACTCAGGAGGAGCTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025802.10
CDS CAA 90 bp TCTGCAGATCCAGTGGGCCCACGTTGGCAAGTACTGGGACTATGGTaGCCTTTTCCCGGTCATACACTGGCTGCAGGACACCCCACACGT +
Preference number: 6 (lower is better)
Translates to: SADPVGPRWQVLGLW*PFPGHTLAAGHPTR
Trigger: ACGTGTGGGGTGTCCTGCAGCCAGTGTATGACCGGGAAAAGGCAACCATAGTCCCAGTACTTGCCAACGTGGGCCCACTGGATCTGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025802.10
CDS GCA 72 bp ACTTCATCCACCTCCTCAAGGTTGGGCCTAAGGCTCTaGAGATCCAGTGGGCCCACGTTGGCAAGTACTGGG +
Preference number: 6 (lower is better)
Translates to: TSSTSSRLGLRL*RSSGPTLASTG
Trigger: CCCAGTACTTGCCAACGTGGGCCCACTGGATCTGCAGAGCCTTAGGCCCAACCTTGAGGAGGTGGATGAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025802.10
CDS CCA 72 bp CTCCTCAAGGTTGGGCCTAAGGCTCTGCAGATCCAGTaGGCCCACGTTGGCAAGTACTGGGACTATGGTTGC +
Preference number: 6 (lower is better)
Translates to: LLKVGPKALQIQ*AHVGKYWDYGC
Trigger: GCAACCATAGTCCCAGTACTTGCCAACGTGGGCCCACTGGATCTGCAGAGCCTTAGGCCCAACCTTGAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025802.10
CDS CCA 72 bp CTGAAGTGGCCACCCTGGCAGAAGTGGGTATACCCCTaGTTCTGTGTCTGCAGCAAGTGGGCCAGAGACATC +
Preference number: 6 (lower is better)
Translates to: LKWPPWQKWVYP*FCVCSKWARDI
Trigger: GATGTCTCTGGCCCACTTGCTGCAGACACAGAACCAGGGGTATACCCACTTCTGCCAGGGTGGCCACTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025802.10
CDS CAA 72 bp CCAGTGGGCCCACGTTGGCAAGTACTGGGACTATGGTaGCCTTTTCCCGGTCATACACTGGCTGCAGGACAC +
Preference number: 6 (lower is better)
Translates to: PVGPRWQVLGLW*PFPGHTLAAGH
Trigger: GTGTCCTGCAGCCAGTGTATGACCGGGAAAAGGCAACCATAGTCCCAGTACTTGCCAACGTGGGCCCACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025802.10
CDS CAA 72 bp TTGGGCCTAAGGCTCTGCAGATCCAGTGGGCCCACGTaGGCAAGTACTGGGACTATGGTTGCCTTTTCCCGG +
Preference number: 6 (lower is better)
Translates to: LGLRLCRSSGPT*ASTGTMVAFSR
Trigger: CCGGGAAAAGGCAACCATAGTCCCAGTACTTGCCAACGTGGGCCCACTGGATCTGCAGAGCCTTAGGCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025802.10
CDS CCA 72 bp GATCCAGTGGGCCCACGTTGGCAAGTACTGGGACTATaGTTGCCTTTTCCCGGTCATACACTGGCTGCAGGA +
Preference number: 6 (lower is better)
Translates to: DPVGPRWQVLGL*LPFPGHTLAAG
Trigger: TCCTGCAGCCAGTGTATGACCGGGAAAAGGCAACCATAGTCCCAGTACTTGCCAACGTGGGCCCACTGGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025802.10
CDS CCA 72 bp GCTCTGCAGATCCAGTGGGCCCACGTTGGCAAGTACTaGGACTATGGTTGCCTTTTCCCGGTCATACACTGG +
Preference number: 6 (lower is better)
Translates to: ALQIQWAHVGKY*DYGCLFPVIHW
Trigger: CCAGTGTATGACCGGGAAAAGGCAACCATAGTCCCAGTACTTGCCAACGTGGGCCCACTGGATCTGCAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025802.10
CDS CAA 90 bp TCCTCAAGGTTGGGCCTAAGGCTCTGCAGATCCAGTGGGCCCACGTaGGCAAGTACTGGGACTATGGTTGCCTTTTCCCGGTCATACACT +
Preference number: 6 (lower is better)
Translates to: SSRLGLRLCRSSGPT*ASTGTMVAFSRSYT
Trigger: AGTGTATGACCGGGAAAAGGCAACCATAGTCCCAGTACTTGCCAACGTGGGCCCACTGGATCTGCAGAGCCTTAGGCCCAACCTTGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025802.10
CDS CAA 90 bp AAGTGGGCCAGAGACATCTCAAATACTTCATCCACCTCCTCAAGGTaGGGCCTAAGGCTCTGCAGATCCAGTGGGCCCACGTTGGCAAGT +
Preference number: 6 (lower is better)
Translates to: KWARDISNTSSTSSR*GLRLCRSSGPTLAS
Trigger: ACTTGCCAACGTGGGCCCACTGGATCTGCAGAGCCTTAGGCCCAACCTTGAGGAGGTGGATGAAGTATTTGAGATGTCTCTGGCCCACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025802.10
CDS CAA 72 bp CTCCTGAGTCTCCCGAAGGGCCGTATGTATTACATCTaGGTCGTCGGGATCACACTTACCGCCTGGGAAACT +
Preference number: 6 (lower is better)
Translates to: LLSLPKGRMYYI*VVGITLTAWET
Trigger: AGTTTCCCAGGCGGTAAGTGTGATCCCGACGACCAAGATGTAATACATACGGCCCTTCGGGAGACTCAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025802.10
CDS CAA 72 bp AGAGACATCTCAAATACTTCATCCACCTCCTCAAGGTaGGGCCTAAGGCTCTGCAGATCCAGTGGGCCCACG +
Preference number: 6 (lower is better)
Translates to: RDISNTSSTSSR*GLRLCRSSGPT
Trigger: CGTGGGCCCACTGGATCTGCAGAGCCTTAGGCCCAACCTTGAGGAGGTGGATGAAGTATTTGAGATGTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025802.10
CDS GCA 72 bp CCCTGGCAGAAGTGGGTATACCCCTGGTTCTGTGTCTaGAGCAAGTGGGCCAGAGACATCTCAAATACTTCA +
Preference number: 6 (lower is better)
Translates to: PWQKWVYPWFCV*SKWARDISNTS
Trigger: TGAAGTATTTGAGATGTCTCTGGCCCACTTGCTGCAGACACAGAACCAGGGGTATACCCACTTCTGCCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025802.10
CDS CCA 72 bp TATTACATCTTGGTCGTCGGGATCACACTTACCGCCTaGGAAACTGACTTCCCCTTTGTGTCTCCCAACCAG +
Preference number: 6 (lower is better)
Translates to: YYILVVGITLTA*ETDFPFVSPNQ
Trigger: CTGGTTGGGAGACACAAAGGGGAAGTCAGTTTCCCAGGCGGTAAGTGTGATCCCGACGACCAAGATGTAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025802.10