Pregenerated sensors for NUDT7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031767Ensembl transcript IDs: ENSMUST00000066514.13, ENSMUST00000073521.12, ENSMUST00000109109.8, ENSMUST00000134593.2, ENSMUST00000147605.8
Found 188 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCATGGGCCTCTCCTGTTCATCTGTTTCTGTTGCTTGGGAAGTCCTaGCCCCTCCCGCACACATCACAGAGGCTTTCACGCACGGAATCA | + |
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Preference number: 1 (lower is better) Translates to: PWASPVHLFLLLGKS*PLPHTSQRLSRTES Trigger: TGATTCCGTGCGTGAAAGCCTCTGTGATGTGTGCGGGAGGGGGCAGGACTTCCCAAGCAACAGAAACAGATGAACAGGAGAGGCCCATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073521.12 |
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| 3UTR TCA 90 bp | AATCCCAGGGCGTCCATTGGATGGCAGAGCTCCTGGAGAGACCGCTaGGCCAGCTTAACCTCTACTGTCATGGAATCGAGGAGGGTAAAG | + |
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Preference number: 1 (lower is better) Translates to: NPRASIGWQSSWRDR*ASLTSTVMESRRVK Trigger: CTTTACCCTCCTCGATTCCATGACAGTAGAGGTTAAGCTGGCTCAGCGGTCTCTCCAGGAGCTCTGCCATCCAATGGACGCCCTGGGATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073521.12 |
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| 3UTR TCA 90 bp | ACTGGCAGCGTCATCTTTCTCCTACATCACGTTGTTGCTGCAAACTaGATCCCAGGGCGTCCATTGGATGGCAGAGCTCCTGGAGAGACC | + |
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Preference number: 1 (lower is better) Translates to: TGSVIFLLHHVVAAN*IPGRPLDGRAPGET Trigger: GGTCTCTCCAGGAGCTCTGCCATCCAATGGACGCCCTGGGATTCAGTTTGCAGCAACAACGTGATGTAGGAGAAAGATGACGCTGCCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073521.12 |
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| 3UTR GCA 90 bp | GCTTTGCTTCAGGGTCGCTCAGAGAGCCAGGCGTTGACCATTCTTTaGTTTCTGCCATTTCCTTGCGGGATTTCTCCACCCACCTGGTTG | + |
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Preference number: 1 (lower is better) Translates to: ALLQGRSESQALTIL*FLPFPCGISPPTWL Trigger: CAACCAGGTGGGTGGAGAAATCCCGCAAGGAAATGGCAGAAAGCAAAGAATGGTCAACGCCTGGCTCTCTGAGCGACCCTGAAGCAAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073521.12 |
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| 3UTR TCA 90 bp | CGTAACAGGCTGCTTTGCTTCAGGGTCGCTCAGAGAGCCAGGCGTTaGCCATTCTTTGCTTTCTGCCATTTCCTTGCGGGATTTCTCCAC | + |
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Preference number: 1 (lower is better) Translates to: RNRLLCFRVAQRARR*PFFAFCHFLAGFLH Trigger: GTGGAGAAATCCCGCAAGGAAATGGCAGAAAGCAAAGAATGGTCAACGCCTGGCTCTCTGAGCGACCCTGAAGCAAAGCAGCCTGTTACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073521.12 |
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| 3UTR CCA 90 bp | CTCTGGCACCACCAACCTCTTTTTAAACAGAGGCTCTCATTGGCCTaGAGTTTGCCAAGCAGGGTAGGTTGCCTGGACAGAAAGCCTCAG | + |
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Preference number: 1 (lower is better) Translates to: LWHHQPLFKQRLSLA*SLPSRVGCLDRKPQ Trigger: CTGAGGCTTTCTGTCCAGGCAACCTACCCTGCTTGGCAAACTCCAGGCCAATGAGAGCCTCTGTTTAAAAAGAGGTTGGTGGTGCCAGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073521.12 |
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| 3UTR CCA 90 bp | AGACAAGGTCTTTCAGTGGCCTGGAGTCTGCCCATTTTGTTTTGCTaGCTGCCAATGAGCCTCATGAGGTTCTCCCTGCTTCCCTTCCCT | + |
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Preference number: 1 (lower is better) Translates to: RQGLSVAWSLPILFC*LPMSLMRFSLLPFP Trigger: AGGGAAGGGAAGCAGGGAGAACCTCATGAGGCTCATTGGCAGCCAGCAAAACAAAATGGGCAGACTCCAGGCCACTGAAAGACCTTGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073521.12 |
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| 3UTR GCA 90 bp | TCAGAGAGCCAGGCGTTGACCATTCTTTGCTTTCTGCCATTTCCTTaGGGGATTTCTCCACCCACCTGGTTGGGTTGCAGATATATCTAC | + |
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Preference number: 1 (lower is better) Translates to: SESQALTILCFLPFP*GISPPTWLGCRYIY Trigger: GTAGATATATCTGCAACCCAACCAGGTGGGTGGAGAAATCCCGCAAGGAAATGGCAGAAAGCAAAGAATGGTCAACGCCTGGCTCTCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073521.12 |
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| 3UTR GCA 90 bp | ACTCTAACTTGGGTGTCTTCAGGTTGTAGAGTTCAGCTGCCCCAATaGCTTCTGGAAAGCAAGCAAGGCCCGTGTAGTTCACATCAACAG | + |
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Preference number: 1 (lower is better) Translates to: TLTWVSSGCRVQLPQ*LLESKQGPCSSHQQ Trigger: CTGTTGATGTGAACTACACGGGCCTTGCTTGCTTTCCAGAAGGCATTGGGGCAGCTGAACTCTACAACCTGAAGACACCCAAGTTAGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073521.12 |
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| 3UTR GCA 90 bp | TGCAAATGCCTCTGTAATTGTCCAGAAATGGCTCAGGCCTGCTCATaGAGAGATAGTTGCAGAATGTTAATGGGGATGCTCACCCAACAT | + |
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Preference number: 1 (lower is better) Translates to: CKCLCNCPEMAQACS*RDSCRMLMGMLTQH Trigger: ATGTTGGGTGAGCATCCCCATTAACATTCTGCAACTATCTCTGCATGAGCAGGCCTGAGCCATTTCTGGACAATTACAGAGGCATTTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073521.12 |
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| 3UTR GCA 90 bp | CACATTTGCAAATGCCTCTGTAATTGTCCAGAAATGGCTCAGGCCTaGTCATGCAGAGATAGTTGCAGAATGTTAATGGGGATGCTCACC | + |
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Preference number: 1 (lower is better) Translates to: HICKCLCNCPEMAQA*SCRDSCRMLMGMLT Trigger: GGTGAGCATCCCCATTAACATTCTGCAACTATCTCTGCATGAGCAGGCCTGAGCCATTTCTGGACAATTACAGAGGCATTTGCAAATGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073521.12 |
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| 3UTR CCA 90 bp | GTGTTTTATTTGCCTTTAGCACACTGGGAGATGGCTGGTTATATTTaGAGGTCCATGGGCCTCTCCTGTTCATCTGTTTCTGTTGCTTGG | + |
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Preference number: 1 (lower is better) Translates to: VFYLPLAHWEMAGYI*RSMGLSCSSVSVAW Trigger: CCAAGCAACAGAAACAGATGAACAGGAGAGGCCCATGGACCTCCAAATATAACCAGCCATCTCCCAGTGTGCTAAAGGCAAATAAAACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073521.12 |
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| 3UTR CCA 90 bp | CTCGAAATAGGTGTTTTATTTGCCTTTAGCACACTGGGAGATGGCTaGTTATATTTGGAGGTCCATGGGCCTCTCCTGTTCATCTGTTTC | + |
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Preference number: 1 (lower is better) Translates to: LEIGVLFAFSTLGDG*LYLEVHGPLLFICF Trigger: GAAACAGATGAACAGGAGAGGCCCATGGACCTCCAAATATAACCAGCCATCTCCCAGTGTGCTAAAGGCAAATAAAACACCTATTTCGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073521.12 |
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| 3UTR TCA 90 bp | AGGGTAAAGTGTGTGTGTGTGTGTGTGTGTGTGTATGGACATGTGTaGGCATGTGTGTGTAGGTCAATCTTACATGTTTTTCCTCTGGCA | + |
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Preference number: 1 (lower is better) Translates to: RVKCVCVCVCVYGHV*ACVCRSILHVFPLA Trigger: TGCCAGAGGAAAAACATGTAAGATTGACCTACACACACATGCTCACACATGTCCATACACACACACACACACACACACACACTTTACCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073521.12 |
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| 3UTR TCA 90 bp | TTGTTATGCTTGGACAGCAACCACATTACTAACTGTCTTATGTTTTaGGACAAGGTCTTTCAGTGGCCTGGAGTCTGCCCATTTTGTTTT | + |
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Preference number: 1 (lower is better) Translates to: LLCLDSNHITNCLMF*DKVFQWPGVCPFCF Trigger: AAAACAAAATGGGCAGACTCCAGGCCACTGAAAGACCTTGTCTCAAAACATAAGACAGTTAGTAATGTGGTTGCTGTCCAAGCATAACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073521.12 |
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| 3UTR CCA 90 bp | AGTTGCAGAATGTTAATGGGGATGCTCACCCAACATCTGCTTTCCTaGTTGGATCCAGATTTGCACCATTTAAACATTGATGAGCATAAA | + |
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Preference number: 1 (lower is better) Translates to: SCRMLMGMLTQHLLS*LDPDLHHLNIDEHK Trigger: TTTATGCTCATCAATGTTTAAATGGTGCAAATCTGGATCCAACCAGGAAAGCAGATGTTGGGTGAGCATCCCCATTAACATTCTGCAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073521.12 |
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| 3UTR TCA 90 bp | TTCTCAATCATTTCTGTTTTATTTTTGGTGGTCTCTCATAGAACGTaGAGGCCAGCATTTCAACTAGACTGTCTAGCAAGCAAGCCGATA | + |
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Preference number: 1 (lower is better) Translates to: FSIISVLFLVVSHRT*RPAFQLDCLASKPI Trigger: TATCGGCTTGCTTGCTAGACAGTCTAGTTGAAATGCTGGCCTTCACGTTCTATGAGAGACCACCAAAAATAAAACAGAAATGATTGAGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073521.12 |
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| 3UTR CAA 90 bp | TGCTTTGCTTCAGGGTCGCTCAGAGAGCCAGGCGTTGACCATTCTTaGCTTTCTGCCATTTCCTTGCGGGATTTCTCCACCCACCTGGTT | + |
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Preference number: 2 (lower is better) Translates to: CFASGSLREPGVDHS*LSAISLRDFSTHLV Trigger: AACCAGGTGGGTGGAGAAATCCCGCAAGGAAATGGCAGAAAGCAAAGAATGGTCAACGCCTGGCTCTCTGAGCGACCCTGAAGCAAAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073521.12 |
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| 3UTR CAA 90 bp | CACCACCAACCTCTTTTTAAACAGAGGCTCTCATTGGCCTGGAGTTaGCCAAGCAGGGTAGGTTGCCTGGACAGAAAGCCTCAGAGATGC | + |
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Preference number: 2 (lower is better) Translates to: HHQPLFKQRLSLAWS*PSRVGCLDRKPQRC Trigger: GCATCTCTGAGGCTTTCTGTCCAGGCAACCTACCCTGCTTGGCAAACTCCAGGCCAATGAGAGCCTCTGTTTAAAAAGAGGTTGGTGGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073521.12 |
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| 3UTR-3UTR GCA 90 bp | TCCTGCACCGCCAGAGAGGTCAGCCATCTAACCAGCAATTACACTGCTGTCAGATTCATCTGTTTCTGTTaGTTGGGAAGTCCTGCCCCC | + |
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Preference number: 2 (lower is better) Translates to: SCTAREVSHLTSNYTAVRFICFC*LGSPAP Trigger: GGGGGCAGGACTTCCCAAGCAACAGAAACAGATGAA...TCTGACAGCAGTGTAATTGCTGGTTAGATGGCTGACCTCTCTGGCGGTGCAGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073521.12 |
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| 3UTR CAA 90 bp | AATCTAACGCAACTGGCAGCGTCATCTTTCTCCTACATCACGTTGTaGCTGCAAACTGAATCCCAGGGCGTCCATTGGATGGCAGAGCTC | + |
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Preference number: 2 (lower is better) Translates to: NLTQLAASSFSYITL*LQTESQGVHWMAEL Trigger: GAGCTCTGCCATCCAATGGACGCCCTGGGATTCAGTTTGCAGCAACAACGTGATGTAGGAGAAAGATGACGCTGCCAGTTGCGTTAGATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073521.12 |
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| 3UTR-3UTR TCA 90 bp | AGCATTTCAACTAGACTGTCTAGCAAGCAAGCCGATAGCATCCACTTTCTCTACAGGCATGGTCTGTGGTaGAGGCCACTGAGGAGGCAG | + |
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Preference number: 2 (lower is better) Translates to: SISTRLSSKQADSIHFLYRHGLW*RPLRRQ Trigger: CTGCCTCCTCAGTGGCCTTCACCACAGACCATGCCT...GTAGAGAAAGTGGATGCTATCGGCTTGCTTGCTAGACAGTCTAGTTGAAATGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073521.12 |
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| 3UTR-3UTR TCA 90 bp | TTGTTTTGCTGGCTGCCAATGAGCCTCATGAGGTTCTCCCTGCTTCCCTTCCCTATAGAACTTTGCTCATaGAGTTCTCACTCCAGCCCC | + |
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Preference number: 2 (lower is better) Translates to: LFCWLPMSLMRFSLLPFPIELCS*SSHSSP Trigger: GGGGCTGGAGTGAGAACTTCATGAGCAAAGTTCTAT...AGGGAAGGGAAGCAGGGAGAACCTCATGAGGCTCATTGGCAGCCAGCAAAACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073521.12 |
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| 3UTR-3UTR CCA 90 bp | CACAGAGGCTTTCACGCACGGAATCAGAGCTGGGGATGGCAATTTTGCTTCCAAAACAGAGGCTCTCATTaGCCTGGAGTTTGCCAAGCA | + |
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Preference number: 2 (lower is better) Translates to: HRGFHARNQSWGWQFCFQNRGSH*PGVCQA Trigger: TGCTTGGCAAACTCCAGGCCAATGAGAGCCTCTGTT...TTGGAAGCAAAATTGCCATCCCCAGCTCTGATTCCGTGCGTGAAAGCCTCTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000073521.12 |
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| 3UTR-3UTR CCA 90 bp | AGCATTTCAACTAGACTGTCTAGCAAGCAAGCCGATAGCATCCACTTTCTCTACTCCCAGGGCGTCCATTaGATGGCAGAGCTCCTGGAG | + |
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Preference number: 2 (lower is better) Translates to: SISTRLSSKQADSIHFLYSQGVH*MAELLE Trigger: CTCCAGGAGCTCTGCCATCCAATGGACGCCCTGGGA...GTAGAGAAAGTGGATGCTATCGGCTTGCTTGCTAGACAGTCTAGTTGAAATGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073521.12 |
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| 3UTR CAA 90 bp | TTTTTCCTCTGGCACCACCAACCTCTTTTTAAACAGAGGCTCTCATaGGCCTGGAGTTTGCCAAGCAGGGTAGGTTGCCTGGACAGAAAG | + |
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Preference number: 2 (lower is better) Translates to: FFLWHHQPLFKQRLS*AWSLPSRVGCLDRK Trigger: CTTTCTGTCCAGGCAACCTACCCTGCTTGGCAAACTCCAGGCCAATGAGAGCCTCTGTTTAAAAAGAGGTTGGTGGTGCCAGAGGAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000073521.12 |
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| 3UTR CAA 90 bp | TTGAATCTAACGCAACTGGCAGCGTCATCTTTCTCCTACATCACGTaGTTGCTGCAAACTGAATCCCAGGGCGTCCATTGGATGGCAGAG | + |
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Preference number: 2 (lower is better) Translates to: LNLTQLAASSFSYIT*LLQTESQGVHWMAE Trigger: CTCTGCCATCCAATGGACGCCCTGGGATTCAGTTTGCAGCAACAACGTGATGTAGGAGAAAGATGACGCTGCCAGTTGCGTTAGATTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073521.12 |
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| 3UTR CAA 90 bp | CTCAGAGAGCCAGGCGTTGACCATTCTTTGCTTTCTGCCATTTCCTaGCGGGATTTCTCCACCCACCTGGTTGGGTTGCAGATATATCTA | + |
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Preference number: 2 (lower is better) Translates to: LREPGVDHSLLSAIS*RDFSTHLVGLQIYL Trigger: TAGATATATCTGCAACCCAACCAGGTGGGTGGAGAAATCCCGCAAGGAAATGGCAGAAAGCAAAGAATGGTCAACGCCTGGCTCTCTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073521.12 |
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| 3UTR CAA 90 bp | GGTGTTTTATTTGCCTTTAGCACACTGGGAGATGGCTGGTTATATTaGGAGGTCCATGGGCCTCTCCTGTTCATCTGTTTCTGTTGCTTG | + |
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Preference number: 2 (lower is better) Translates to: GVLFAFSTLGDGWLY*EVHGPLLFICFCCL Trigger: CAAGCAACAGAAACAGATGAACAGGAGAGGCCCATGGACCTCCAAATATAACCAGCCATCTCCCAGTGTGCTAAAGGCAAATAAAACACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073521.12 |
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| 3UTR-3UTR CCA 90 bp | TTTTATTTGCCTTTAGCACACTGGGAGATGGCTGGTTATATTTGGAGGTCCATGAGGCTCTCATTGGCCTaGAGTTTGCCAAGCAGGGTA | + |
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Preference number: 2 (lower is better) Translates to: FYLPLAHWEMAGYIWRSMRLSLA*SLPSRV Trigger: TACCCTGCTTGGCAAACTCCAGGCCAATGAGAGCCT...CATGGACCTCCAAATATAACCAGCCATCTCCCAGTGTGCTAAAGGCAAATAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073521.12 |
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| 3UTR-3UTR TCA 90 bp | TCCCTGCTTCCCTTCCCTAGCCCTGCGATTGCAAACAAGTGTCTAACTTTAAAAGTCATTGTACCTGGGTaGTCAAACTCAGAACCGTAT | + |
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Preference number: 2 (lower is better) Translates to: SLLPFPSPAIANKCLTLKVIVPG*SNSEPY Trigger: ATACGGTTCTGAGTTTGATCACCCAGGTACAATGAC...TTTTAAAGTTAGACACTTGTTTGCAATCGCAGGGCTAGGGAAGGGAAGCAGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073521.12 |
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| 3UTR-3UTR TCA 90 bp | AAAACAAACCAAAACTCAACATCAATGGACACTTCTTCAGCAGCAATGGACACTTGTGGTGAAGGCCACTaGGGAGGCAGGAGATCTCAA | + |
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Preference number: 2 (lower is better) Translates to: KTNQNSTSMDTSSAAMDTCGEGH*GGRRSQ Trigger: TTGAGATCTCCTGCCTCCTCAGTGGCCTTCACCACA...AGTGTCCATTGCTGCTGAAGAAGTGTCCATTGATGTTGAGTTTTGGTTTGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073521.12 |
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| 3UTR-3UTR TCA 90 bp | GCATTTCAACTAGACTGTCTAGCAAGCAAGCCGATAGCATCCACTTTCTCTACCTCAAAGCATGCAGTTTaGAATGCTTGTCTCTCTGAT | + |
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Preference number: 2 (lower is better) Translates to: AFQLDCLASKPIASTFSTSKHAV*NACLSD Trigger: ATCAGAGAGACAAGCATTTCAAACTGCATGCTTTGA...GGTAGAGAAAGTGGATGCTATCGGCTTGCTTGCTAGACAGTCTAGTTGAAATGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073521.12 |
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| 3UTR-3UTR GCA 90 bp | ATGCTGCTATTAATAAATACCCACACTCTAACTTGGGTGTCTTCAGGTTGTAGATTTCTGCCATTTCCTTaGGGGATTTCTCCACCCACC | + |
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Preference number: 2 (lower is better) Translates to: MLLLINTHTLTWVSSGCRFLPFP*GISPPT Trigger: GGTGGGTGGAGAAATCCCGCAAGGAAATGGCAGAAA...TCTACAACCTGAAGACACCCAAGTTAGAGTGTGGGTATTTATTAATAGCAGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073521.12 |
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| 3UTR-3UTR GCA 90 bp | ATGCTGCTATTAATAAATACCCACACTCTAACTTGGGTGTCTTCAGGTTGTAGAGAAATGGCTCAGGCCTaGTCATGCAGAGATAGTTGC | + |
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Preference number: 2 (lower is better) Translates to: MLLLINTHTLTWVSSGCREMAQA*SCRDSC Trigger: GCAACTATCTCTGCATGAGCAGGCCTGAGCCATTTC...TCTACAACCTGAAGACACCCAAGTTAGAGTGTGGGTATTTATTAATAGCAGCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073521.12 |
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| 3UTR-3UTR GCA 90 bp | GCATTTCAACTAGACTGTCTAGCAAGCAAGCCGATAGCATCCACTTTCTCTACCTTTACAGACGCGTACTaGCATGTCCAGGTTTTATAT | + |
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Preference number: 2 (lower is better) Translates to: AFQLDCLASKPIASTFSTFTDAY*HVQVLY Trigger: ATATAAAACCTGGACATGGCAGTACGCGTCTGTAAA...GGTAGAGAAAGTGGATGCTATCGGCTTGCTTGCTAGACAGTCTAGTTGAAATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073521.12 |
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| 3UTR-3UTR CCA 90 bp | GGTCCCTCCAAGGGGATACCGTTTAGTATGCTGCATAATAGTGCATTATTTTCACCATCTGAACATCAATaGAACAGTTCTGAGTACGCC | + |
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Preference number: 2 (lower is better) Translates to: GPSKGIPFSMLHNSALFSPSEHQ*NSSEYA Trigger: GGCGTACTCAGAACTGTTCCATTGATGTTCAGATGG...TGAAAATAATGCACTATTATGCAGCATACTAAACGGTATCCCCTTGGAGGGACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134593.2 |
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| 3UTR CAA 90 bp | TCACAGCCACATTGTAGGAAAATATTCACACCTGTCAGATGCCACTaGCTAAACACTGTTGTTCTGAGCATAAGCTCACACAAAAACCTC | + |
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Preference number: 2 (lower is better) Translates to: SQPHCRKIFTPVRCH*LNTVVLSISSHKNL Trigger: GAGGTTTTTGTGTGAGCTTATGCTCAGAACAACAGTGTTTAGCAAGTGGCATCTGACAGGTGTGAATATTTTCCTACAATGTGGCTGTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000066514.13 ENSMUST00000073521.12 ENSMUST00000109109.8 ENSMUST00000147605.8 |
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| 3UTR CAA 90 bp | TGCAGAATGTTAATGGGGATGCTCACCCAACATCTGCTTTCCTGGTaGGATCCAGATTTGCACCATTTAAACATTGATGAGCATAAAGCA | + |
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Preference number: 2 (lower is better) Translates to: CRMLMGMLTQHLLSW*DPDLHHLNIDEHKA Trigger: TGCTTTATGCTCATCAATGTTTAAATGGTGCAAATCTGGATCCAACCAGGAAAGCAGATGTTGGGTGAGCATCCCCATTAACATTCTGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073521.12 |
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| 3UTR-3UTR CCA 90 bp | CCAAGGGGATACCGTTTAGTATGCTGCATAATAGTGCATTATTTTCAACTGAGTAAAATCAATGTGTCCTaGAGAAAAGTACACACCATC | + |
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Preference number: 2 (lower is better) Translates to: PRGYRLVCCIIVHYFQLSKINVS*RKVHTI Trigger: GATGGTGTGTACTTTTCTCCAGGACACATTGATTTT...ACTCAGTTGAAAATAATGCACTATTATGCAGCATACTAAACGGTATCCCCTTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000134593.2 |
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| 3UTR-3UTR CAA 90 bp | TCCTGCCCCCTCCCGCACACATCACAGAGGCTTTCACGCACGGAATCAGAGCTGGCCAAGCAGGGTAGGTaGCCTGGACAGAAAGCCTCA | + |
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Preference number: 3 (lower is better) Translates to: SCPLPHTSQRLSRTESELAKQGR*PGQKAS Trigger: TGAGGCTTTCTGTCCAGGCAACCTACCCTGCTTGGC...CAGCTCTGATTCCGTGCGTGAAAGCCTCTGTGATGTGTGCGGGAGGGGGCAGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073521.12 |
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| 3UTR-3UTR CAA 90 bp | GCCCCCTCCCGCACACATCACAGAGGCTTTCACGCACGGAATCAGAGCTGGGGAACCACACCTGGGTCATaGTACCTGGGTGATCAAACT | + |
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Preference number: 3 (lower is better) Translates to: APSRTHHRGFHARNQSWGTTPGS*YLGDQT Trigger: AGTTTGATCACCCAGGTACAATGACCCAGGTGTGGT...TCCCCAGCTCTGATTCCGTGCGTGAAAGCCTCTGTGATGTGTGCGGGAGGGGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073521.12 |
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| 3UTR CCA 72 bp | ACGTTGTTGCTGCAAACTGAATCCCAGGGCGTCCATTaGATGGCAGAGCTCCTGGAGAGACCGCTGAGCCAG | + |
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Preference number: 3 (lower is better) Translates to: TLLLQTESQGVH*MAELLERPLSQ Trigger: CTGGCTCAGCGGTCTCTCCAGGAGCTCTGCCATCCAATGGACGCCCTGGGATTCAGTTTGCAGCAACAACGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073521.12 |
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| 3UTR TCA 72 bp | GCGTCCATTGGATGGCAGAGCTCCTGGAGAGACCGCTaGGCCAGCTTAACCTCTACTGTCATGGAATCGAGG | + |
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Preference number: 3 (lower is better) Translates to: ASIGWQSSWRDR*ASLTSTVMESR Trigger: CCTCGATTCCATGACAGTAGAGGTTAAGCTGGCTCAGCGGTCTCTCCAGGAGCTCTGCCATCCAATGGACGC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073521.12 |
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| 3UTR-3UTR CAA 90 bp | CACAGAGGCTTTCACGCACGGAATCAGAGCTGGGGATGGCAATTTTGCTTCCAAATCCCAGGGCGTCCATaGGATGGCAGAGCTCCTGGA | + |
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Preference number: 3 (lower is better) Translates to: HRGFHARNQSWGWQFCFQIPGRP*DGRAPG Trigger: TCCAGGAGCTCTGCCATCCAATGGACGCCCTGGGAT...TTGGAAGCAAAATTGCCATCCCCAGCTCTGATTCCGTGCGTGAAAGCCTCTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073521.12 |
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| 3UTR TCA 72 bp | AAGAAATCCCTGCTGGGGCTGAGGCATGGTCTGTGGTaGAGGCCACTGAGGAGGCAGGAGATCTCAAAGCAT | + |
|
Preference number: 3 (lower is better) Translates to: KKSLLGLRHGLW*RPLRRQEISKH Trigger: ATGCTTTGAGATCTCCTGCCTCCTCAGTGGCCTTCACCACAGACCATGCCTCAGCCCCAGCAGGGATTTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073521.12 |
||
| 3UTR GCA 72 bp | CAGGGTCGCTCAGAGAGCCAGGCGTTGACCATTCTTTaGTTTCTGCCATTTCCTTGCGGGATTTCTCCACCC | + |
|
Preference number: 3 (lower is better) Translates to: QGRSESQALTIL*FLPFPCGISPP Trigger: GGGTGGAGAAATCCCGCAAGGAAATGGCAGAAAGCAAAGAATGGTCAACGCCTGGCTCTCTGAGCGACCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073521.12 |
||
| 3UTR GCA 72 bp | TCTCCTGTTCATCTGTTTCTGTTGCTTGGGAAGTCCTaGCCCCTCCCGCACACATCACAGAGGCTTTCACGC | + |
|
Preference number: 3 (lower is better) Translates to: SPVHLFLLLGKS*PLPHTSQRLSR Trigger: GCGTGAAAGCCTCTGTGATGTGTGCGGGAGGGGGCAGGACTTCCCAAGCAACAGAAACAGATGAACAGGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073521.12 |
||
| 3UTR GCA 72 bp | GGTCTTTCAGTGGCCTGGAGTCTGCCCATTTTGTTTTaGTGGCTGCCAATGAGCCTCATGAGGTTCTCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: GLSVAWSLPILF*WLPMSLMRFSL Trigger: CAGGGAGAACCTCATGAGGCTCATTGGCAGCCAGCAAAACAAAATGGGCAGACTCCAGGCCACTGAAAGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073521.12 |
||
| 3UTR GCA 72 bp | TGGCAGCGTCATCTTTCTCCTACATCACGTTGTTGCTaGAAACTGAATCCCAGGGCGTCCATTGGATGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: WQRHLSPTSRCC*KLNPRASIGWQ Trigger: CTGCCATCCAATGGACGCCCTGGGATTCAGTTTGCAGCAACAACGTGATGTAGGAGAAAGATGACGCTGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073521.12 |
||
| 3UTR GCA 72 bp | CAGGCGTTGACCATTCTTTGCTTTCTGCCATTTCCTTaGGGGATTTCTCCACCCACCTGGTTGGGTTGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: QALTILCFLPFP*GISPPTWLGCR Trigger: TCTGCAACCCAACCAGGTGGGTGGAGAAATCCCGCAAGGAAATGGCAGAAAGCAAAGAATGGTCAACGCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073521.12 |
||
| 3UTR GCA 72 bp | TGGGTGTCTTCAGGTTGTAGAGTTCAGCTGCCCCAATaGCTTCTGGAAAGCAAGCAAGGCCCGTGTAGTTCA | + |
|
Preference number: 3 (lower is better) Translates to: WVSSGCRVQLPQ*LLESKQGPCSS Trigger: TGAACTACACGGGCCTTGCTTGCTTTCCAGAAGGCATTGGGGCAGCTGAACTCTACAACCTGAAGACACCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073521.12 |
||
| 3UTR-3UTR CAA 90 bp | GATGAGCATAAAGCAGTGGACTGGGTACTTGCCTCTGCCAACTTCAAGAGGGGAGTTCATCTGTTTCTGTaGCTTGGGAAGTCCTGCCCC | + |
|
Preference number: 3 (lower is better) Translates to: DEHKAVDWVLASANFKRGVHLFL*LGKSCP Trigger: GGGGCAGGACTTCCCAAGCAACAGAAACAGATGAAC...TCCCCTCTTGAAGTTGGCAGAGGCAAGTACCCAGTCCACTGCTTTATGCTCATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073521.12 |
||
| 3UTR-3UTR CAA 90 bp | TTGTTTTGCTGGCTGCCAATGAGCCTCATGAGGTTCTCCCTGCTTCCCTTCCCTCATCTGCTTTCCTGGTaGGATCCAGATTTGCACCAT | + |
|
Preference number: 3 (lower is better) Translates to: LFCWLPMSLMRFSLLPFPHLLSW*DPDLHH Trigger: ATGGTGCAAATCTGGATCCAACCAGGAAAGCAGATG...AGGGAAGGGAAGCAGGGAGAACCTCATGAGGCTCATTGGCAGCCAGCAAAACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073521.12 |
||
| 3UTR TCA 72 bp | GTCATCTTTCTCCTACATCACGTTGTTGCTGCAAACTaGATCCCAGGGCGTCCATTGGATGGCAGAGCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: VIFLLHHVVAAN*IPGRPLDGRAP Trigger: AGGAGCTCTGCCATCCAATGGACGCCCTGGGATTCAGTTTGCAGCAACAACGTGATGTAGGAGAAAGATGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073521.12 |
||
| 3UTR GCA 72 bp | AACTGGCAGCGTCATCTTTCTCCTACATCACGTTGTTaGTGCAAACTGAATCCCAGGGCGTCCATTGGATGG | + |
|
Preference number: 3 (lower is better) Translates to: NWQRHLSPTSRC*CKLNPRASIGW Trigger: CCATCCAATGGACGCCCTGGGATTCAGTTTGCAGCAACAACGTGATGTAGGAGAAAGATGACGCTGCCAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073521.12 |
||
| 3UTR GCA 72 bp | TTTCCTTGCGGGATTTCTCCACCCACCTGGTTGGGTTaGAGATATATCTACACGGTAGCTCACGGAAGACAG | + |
|
Preference number: 3 (lower is better) Translates to: FPCGISPPTWLG*RYIYTVAHGRQ Trigger: CTGTCTTCCGTGAGCTACCGTGTAGATATATCTGCAACCCAACCAGGTGGGTGGAGAAATCCCGCAAGGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073521.12 |
||
| 3UTR CCA 72 bp | CACCAACCTCTTTTTAAACAGAGGCTCTCATTGGCCTaGAGTTTGCCAAGCAGGGTAGGTTGCCTGGACAGA | + |
|
Preference number: 3 (lower is better) Translates to: HQPLFKQRLSLA*SLPSRVGCLDR Trigger: TCTGTCCAGGCAACCTACCCTGCTTGGCAAACTCCAGGCCAATGAGAGCCTCTGTTTAAAAAGAGGTTGGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073521.12 |
||
| 3UTR CCA 72 bp | CACACTGGGAGATGGCTGGTTATATTTGGAGGTCCATaGGCCTCTCCTGTTCATCTGTTTCTGTTGCTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: HTGRWLVIFGGP*ASPVHLFLLLG Trigger: CCCAAGCAACAGAAACAGATGAACAGGAGAGGCCCATGGACCTCCAAATATAACCAGCCATCTCCCAGTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073521.12 |
||
| 3UTR CCA 72 bp | CTTCAGGTTGTAGAGTTCAGCTGCCCCAATGCCTTCTaGAAAGCAAGCAAGGCCCGTGTAGTTCACATCAAC | + |
|
Preference number: 3 (lower is better) Translates to: LQVVEFSCPNAF*KASKARVVHIN Trigger: GTTGATGTGAACTACACGGGCCTTGCTTGCTTTCCAGAAGGCATTGGGGCAGCTGAACTCTACAACCTGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073521.12 |
||
| 3UTR CCA 72 bp | TTGCCTTTAGCACACTGGGAGATGGCTGGTTATATTTaGAGGTCCATGGGCCTCTCCTGTTCATCTGTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: LPLAHWEMAGYI*RSMGLSCSSVS Trigger: AGAAACAGATGAACAGGAGAGGCCCATGGACCTCCAAATATAACCAGCCATCTCCCAGTGTGCTAAAGGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073521.12 |
||
| 3UTR CCA 72 bp | GGTGTTTTATTTGCCTTTAGCACACTGGGAGATGGCTaGTTATATTTGGAGGTCCATGGGCCTCTCCTGTTC | + |
|
Preference number: 3 (lower is better) Translates to: GVLFAFSTLGDG*LYLEVHGPLLF Trigger: GAACAGGAGAGGCCCATGGACCTCCAAATATAACCAGCCATCTCCCAGTGTGCTAAAGGCAAATAAAACACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073521.12 |
||
| 3UTR-3UTR CAA 90 bp | GCCTTTAGCACACTGGGAGATGGCTGGTTATATTTGGAGGTCCATGGGCCTCTCAGTTTGCTTTCTCTTTaGAATCTAACGCAACTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: AFSTLGDGWLYLEVHGPLSLLSL*NLTQLA Trigger: TGCCAGTTGCGTTAGATTCAAAAGAGAAAGCAAACT...GAGAGGCCCATGGACCTCCAAATATAACCAGCCATCTCCCAGTGTGCTAAAGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073521.12 |
||
| 3UTR-3UTR CAA 90 bp | GCATTTCAACTAGACTGTCTAGCAAGCAAGCCGATAGCATCCACTTTCTCTACCTCTCCACCCACCTGGTaGGGTTGCAGATATATCTAC | + |
|
Preference number: 3 (lower is better) Translates to: AFQLDCLASKPIASTFSTSPPTW*GCRYIY Trigger: GTAGATATATCTGCAACCCAACCAGGTGGGTGGAGA...GGTAGAGAAAGTGGATGCTATCGGCTTGCTTGCTAGACAGTCTAGTTGAAATGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073521.12 |
||
| 3UTR TCA 72 bp | CCACTGAGGAGGCAGGAGATCTCAAAGCATGCAGTTTaGAATGCTTGTCTCTCTGATTTGGGATTTGTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: PLRRQEISKHAV*NACLSDLGFVL Trigger: GAGCACAAATCCCAAATCAGAGAGACAAGCATTTCAAACTGCATGCTTTGAGATCTCCTGCCTCCTCAGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073521.12 |
||
| 3UTR CCA 72 bp | TGTCCTGGAGAAAAGTACACACCATCTGAACATCAATaGAACAGTTCTGAGTACGCCCAGAGTTCCATGGCA | + |
|
Preference number: 3 (lower is better) Translates to: CPGEKYTPSEHQ*NSSEYAQSSMA Trigger: TGCCATGGAACTCTGGGCGTACTCAGAACTGTTCCATTGATGTTCAGATGGTGTGTACTTTTCTCCAGGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134593.2 |
||
| 3UTR TCA 72 bp | TTGGACAGCAACCACATTACTAACTGTCTTATGTTTTaGGACAAGGTCTTTCAGTGGCCTGGAGTCTGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: LDSNHITNCLMF*DKVFQWPGVCP Trigger: TGGGCAGACTCCAGGCCACTGAAAGACCTTGTCTCAAAACATAAGACAGTTAGTAATGTGGTTGCTGTCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073521.12 |
||
| 3UTR GCA 72 bp | AAATGCCTCTGTAATTGTCCAGAAATGGCTCAGGCCTaGTCATGCAGAGATAGTTGCAGAATGTTAATGGGG | + |
|
Preference number: 3 (lower is better) Translates to: KCLCNCPEMAQA*SCRDSCRMLMG Trigger: CCCCATTAACATTCTGCAACTATCTCTGCATGAGCAGGCCTGAGCCATTTCTGGACAATTACAGAGGCATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073521.12 |
||
| 3UTR-3UTR CAA 90 bp | AAAACAAACCAAAACTCAACATCAATGGACACTTCTTCAGCAGCAATGGACACTAAACAGAGGCTCTCATaGGCCTGGAGTTTGCCAAGC | + |
|
Preference number: 3 (lower is better) Translates to: KTNQNSTSMDTSSAAMDTKQRLS*AWSLPS Trigger: GCTTGGCAAACTCCAGGCCAATGAGAGCCTCTGTTT...AGTGTCCATTGCTGCTGAAGAAGTGTCCATTGATGTTGAGTTTTGGTTTGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073521.12 |
||
| 3UTR-3UTR CAA 90 bp | GAACCGTCTTGTTATGCTTGGACAGCAACCACATTACTAACTGTCTTATGTTTTCAGTGGACTGGGTACTaGCCTCTGCCAACTTCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: EPSCYAWTATTLLTVLCFQWTGY*PLPTSR Trigger: TCTTGAAGTTGGCAGAGGCAAGTACCCAGTCCACTG...AAAACATAAGACAGTTAGTAATGTGGTTGCTGTCCAAGCATAACAAGACGGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073521.12 |
||
| 3UTR GCA 72 bp | CAGCCACATTGTAGGAAAATATTCACACCTGTCAGATaGCACTTGCTAAACACTGTTGTTCTGAGCATAAGC | + |
|
Preference number: 3 (lower is better) Translates to: QPHCRKIFTPVR*HLLNTVVLSIS Trigger: GCTTATGCTCAGAACAACAGTGTTTAGCAAGTGGCATCTGACAGGTGTGAATATTTTCCTACAATGTGGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066514.13 ENSMUST00000073521.12 ENSMUST00000109109.8 ENSMUST00000147605.8 |
||
| 3UTR CCA 72 bp | CATGTGTGTGTAGGTCAATCTTACATGTTTTTCCTCTaGCACCACCAACCTCTTTTTAAACAGAGGCTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: HVCVGQSYMFFL*HHQPLFKQRLS Trigger: TGAGAGCCTCTGTTTAAAAAGAGGTTGGTGGTGCCAGAGGAAAAACATGTAAGATTGACCTACACACACATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000073521.12 |
||
| 3UTR-3UTR CAA 90 bp | AAAACAAACCAAAACTCAACATCAATGGACACTTCTTCAGCAGCAATGGACACTGCTTGTCTCTCTGATTaGGGATTTGTGCTCGAAATA | + |
|
Preference number: 3 (lower is better) Translates to: KTNQNSTSMDTSSAAMDTACLSD*GFVLEI Trigger: TATTTCGAGCACAAATCCCAAATCAGAGAGACAAGC...AGTGTCCATTGCTGCTGAAGAAGTGTCCATTGATGTTGAGTTTTGGTTTGTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073521.12 |
||
| 3UTR TCA 72 bp | GATCTCAAAGCATGCAGTTTGAAATGCTTGTCTCTCTaGTTTGGGATTTGTGCTCGAAATAGGTGTTTTATT | + |
|
Preference number: 3 (lower is better) Translates to: DLKACSLKCLSL*FGICARNRCFI Trigger: AATAAAACACCTATTTCGAGCACAAATCCCAAATCAGAGAGACAAGCATTTCAAACTGCATGCTTTGAGATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073521.12 |
||
| CDS-3UTR CCA 90 bp | GCCTTTAGCACACTGGGAGATGGCTGGTTATATTTGGAGGTCCATGGGCCTCTCACCACCTCCACTTGGTaGGGATGCAGCCCCACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: AFSTLGDGWLYLEVHGPLTTSTW*GCSPTS Trigger: GGAGGTGGGGCTGCATCCCCACCAAGTGGAGGTGGT...GAGAGGCCCATGGACCTCCAAATATAACCAGCCATCTCCCAGTGTGCTAAAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073521.12 |
||
| 3UTR CAA 72 bp | GTCCATGGGCCTCTCCTGTTCATCTGTTTCTGTTGCTaGGGAAGTCCTGCCCCCTCCCGCACACATCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: VHGPLLFICFCC*GSPAPSRTHHR Trigger: TCTGTGATGTGTGCGGGAGGGGGCAGGACTTCCCAAGCAACAGAAACAGATGAACAGGAGAGGCCCATGGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073521.12 |
||
| 3UTR CAA 72 bp | CCAGGCGTTGACCATTCTTTGCTTTCTGCCATTTCCTaGCGGGATTTCTCCACCCACCTGGTTGGGTTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PGVDHSLLSAIS*RDFSTHLVGLQ Trigger: CTGCAACCCAACCAGGTGGGTGGAGAAATCCCGCAAGGAAATGGCAGAAAGCAAAGAATGGTCAACGCCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073521.12 |
||
| 3UTR CAA 72 bp | ACGCAACTGGCAGCGTCATCTTTCTCCTACATCACGTaGTTGCTGCAAACTGAATCCCAGGGCGTCCATTGG | + |
|
Preference number: 4 (lower is better) Translates to: TQLAASSFSYIT*LLQTESQGVHW Trigger: CCAATGGACGCCCTGGGATTCAGTTTGCAGCAACAACGTGATGTAGGAGAAAGATGACGCTGCCAGTTGCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073521.12 |
||
| CDS-3UTR TCA 90 bp | GTTCTAAAGCAGCAACAGGAAGTCAGGCAAGGATCTCACAGCCACATTGTAGGAACGTATGGCACCAGGTaGGAGACCACCTCCACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VLKQQQEVRQGSHSHIVGTYGTR*ETTSTW Trigger: CCAAGTGGAGGTGGTCTCTCACCTGGTGCCATACGT...TCCTACAATGTGGCTGTGAGATCCTTGCCTGACTTCCTGTTGCTGCTTTAGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066514.13 ENSMUST00000073521.12 ENSMUST00000109109.8 |
||
| CDS-3UTR CCA 90 bp | GCAACAGGAAGTCAGGCAAGGATCTCACAGCCACATTGTAGGAAAATATTCACAACCACCTCCACTTGGTaGGGATGCAGCCCCACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ATGSQARISQPHCRKIFTTTSTW*GCSPTS Trigger: GGAGGTGGGGCTGCATCCCCACCAAGTGGAGGTGGT...TGTGAATATTTTCCTACAATGTGGCTGTGAGATCCTTGCCTGACTTCCTGTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066514.13 ENSMUST00000073521.12 ENSMUST00000109109.8 |
||
| CDS-3UTR CCA 90 bp | GTTGTAGAGTTCAGCTGCCCCAATGCCTTCTGGAAAGCAAGCAAGGCCCGTGTAACAACTTTCCTCCTCTaGCCAGCAGTGGTACAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VVEFSCPNAFWKASKARVTTFLL*PAVVQG Trigger: TCCTTGTACCACTGCTGGCCAGAGGAGGAAAGTTGT...TACACGGGCCTTGCTTGCTTTCCAGAAGGCATTGGGGCAGCTGAACTCTACAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073521.12 |
||
| CDS-3UTR CCA 90 bp | AGGAAAATATTCACACCTGTCAGATGCCACTTGCTAAACACTGTTGTTCTGAGCACCACCTCCACTTGGTaGGGATGCAGCCCCACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RKIFTPVRCHLLNTVVLSTTSTW*GCSPTS Trigger: GGAGGTGGGGCTGCATCCCCACCAAGTGGAGGTGGT...GCTCAGAACAACAGTGTTTAGCAAGTGGCATCTGACAGGTGTGAATATTTTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066514.13 ENSMUST00000073521.12 ENSMUST00000109109.8 |
||
| CDS-3UTR CCA 90 bp | TGTTCTAAAGCAGCAACAGGAAGTCAGGCAAGGATCTCACAGCCACATTGTAGGGCATCATTCTCCTCCTaGGCTTCACGGAGAGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: CSKAATGSQARISQPHCRASFSS*ASRRAV Trigger: CACTGCTCTCCGTGAAGCCCAGGAGGAGAATGATGC...CCTACAATGTGGCTGTGAGATCCTTGCCTGACTTCCTGTTGCTGCTTTAGAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147605.8 |
||
| 3UTR CAA 72 bp | CCTCTTTTTAAACAGAGGCTCTCATTGGCCTGGAGTTaGCCAAGCAGGGTAGGTTGCCTGGACAGAAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: PLFKQRLSLAWS*PSRVGCLDRKP Trigger: AGGCTTTCTGTCCAGGCAACCTACCCTGCTTGGCAAACTCCAGGCCAATGAGAGCCTCTGTTTAAAAAGAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073521.12 |
||
| 3UTR CAA 72 bp | CAACTGGCAGCGTCATCTTTCTCCTACATCACGTTGTaGCTGCAAACTGAATCCCAGGGCGTCCATTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: QLAASSFSYITL*LQTESQGVHWM Trigger: CATCCAATGGACGCCCTGGGATTCAGTTTGCAGCAACAACGTGATGTAGGAGAAAGATGACGCTGCCAGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073521.12 |
||
| 3UTR CAA 72 bp | AGACAAGGTCTTTCAGTGGCCTGGAGTCTGCCCATTTaGTTTTGCTGGCTGCCAATGAGCCTCATGAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: RQGLSVAWSLPI*FCWLPMSLMRF Trigger: GAACCTCATGAGGCTCATTGGCAGCCAGCAAAACAAAATGGGCAGACTCCAGGCCACTGAAAGACCTTGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073521.12 |
||
| CDS-3UTR TCA 90 bp | GGATTTGTGCTCGAAATAGGTGTTTTATTTGCCTTTAGCACACTGGGAGATGGCACGTATGGCACCAGGTaGGAGACCACCTCCACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GFVLEIGVLFAFSTLGDGTYGTR*ETTSTW Trigger: CCAAGTGGAGGTGGTCTCTCACCTGGTGCCATACGT...GCCATCTCCCAGTGTGCTAAAGGCAAATAAAACACCTATTTCGAGCACAAATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073521.12 |
||
| CDS-3UTR TCA 90 bp | TTCACACCTGTCAGATGCCACTTGCTAAACACTGTTGTTCTGAGCATAAGCTCAACGTATGGCACCAGGTaGGAGACCACCTCCACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: FTPVRCHLLNTVVLSISSTYGTR*ETTSTW Trigger: CCAAGTGGAGGTGGTCTCTCACCTGGTGCCATACGT...TGAGCTTATGCTCAGAACAACAGTGTTTAGCAAGTGGCATCTGACAGGTGTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066514.13 ENSMUST00000073521.12 ENSMUST00000109109.8 |
||
| CDS-3UTR CCA 90 bp | CCTCCAAGGGGATACCGTTTAGTATGCTGCATAATAGTGCATTATTTTCAACTGACCACCTCCACTTGGTaGGGATGCAGCCCCACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PPRGYRLVCCIIVHYFQLTTSTW*GCSPTS Trigger: GGAGGTGGGGCTGCATCCCCACCAAGTGGAGGTGGT...CAGTTGAAAATAATGCACTATTATGCAGCATACTAAACGGTATCCCCTTGGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000134593.2 |
||
| CDS-3UTR CCA 90 bp | TGTTCTAAAGCAGCAACAGGAAGTCAGGCAAGGATCTCACAGCCACATTGTAGGACAAGGTTGCCTCTGTaGCAGCTCAAGGGACTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: CSKAATGSQARISQPHCRTRLPL*QLKGLY Trigger: GTACAGTCCCTTGAGCTGCCACAGAGGCAACCTTGT...CCTACAATGTGGCTGTGAGATCCTTGCCTGACTTCCTGTTGCTGCTTTAGAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109109.8 |
||
| 3UTR CAA 72 bp | CAGAAAGTGGGGCTCCAGGGGAGTTTGCTTTCTCTTTaGAATCTAACGCAACTGGCAGCGTCATCTTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QKVGLQGSLLSL*NLTQLAASSFS Trigger: GGAGAAAGATGACGCTGCCAGTTGCGTTAGATTCAAAAGAGAAAGCAAACTCCCCTGGAGCCCCACTTTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073521.12 |
||
| 3UTR CAA 72 bp | ATTTCCTTGCGGGATTTCTCCACCCACCTGGTTGGGTaGCAGATATATCTACACGGTAGCTCACGGAAGACA | + |
|
Preference number: 4 (lower is better) Translates to: ISLRDFSTHLVG*QIYLHGSSRKT Trigger: TGTCTTCCGTGAGCTACCGTGTAGATATATCTGCAACCCAACCAGGTGGGTGGAGAAATCCCGCAAGGAAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073521.12 |
||
| CDS-3UTR CCA 90 bp | GTTCTAAAGCAGCAACAGGAAGTCAGGCAAGGATCTCACAGCCACATTGTAGGATGGGCCTGGAAGTTGTaGTCTAGAAAACCCACTACG | + |
|
Preference number: 4 (lower is better) Translates to: VLKQQQEVRQGSHSHIVGWAWKL*SRKPTT Trigger: CGTAGTGGGTTTTCTAGACCACAACTTCCAGGCCCA...TCCTACAATGTGGCTGTGAGATCCTTGCCTGACTTCCTGTTGCTGCTTTAGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066514.13 ENSMUST00000073521.12 ENSMUST00000109109.8 ENSMUST00000147605.8 |
||
| 3UTR CAA 72 bp | TTTGCCTTTAGCACACTGGGAGATGGCTGGTTATATTaGGAGGTCCATGGGCCTCTCCTGTTCATCTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: FAFSTLGDGWLY*EVHGPLLFICF Trigger: GAAACAGATGAACAGGAGAGGCCCATGGACCTCCAAATATAACCAGCCATCTCCCAGTGTGCTAAAGGCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073521.12 |
||
| CDS-3UTR CCA 90 bp | CCTGTCAGATGCCACTTGCTAAACACTGTTGTTCTGAGCATAAGCTCACACAAACTTCACGGAGAGCAGTaGCTGTGTCATCTGTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PVRCHLLNTVVLSISSHKLHGEQ*LCHLCP Trigger: TGGACACAGATGACACAGCCACTGCTCTCCGTGAAG...TTTGTGTGAGCTTATGCTCAGAACAACAGTGTTTAGCAAGTGGCATCTGACAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066514.13 ENSMUST00000073521.12 ENSMUST00000109109.8 ENSMUST00000147605.8 |
||
| CDS-3UTR CCA 90 bp | TGTTCTAAAGCAGCAACAGGAAGTCAGGCAAGGATCTCACAGCCACATTGTAGGTCATCAGCATTAGGTTaGGCCTGGAAGTTGTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: CSKAATGSQARISQPHCRSSALG*AWKLWS Trigger: AGACCACAACTTCCAGGCCCAACCTAATGCTGATGA...CCTACAATGTGGCTGTGAGATCCTTGCCTGACTTCCTGTTGCTGCTTTAGAACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066514.13 ENSMUST00000073521.12 ENSMUST00000109109.8 ENSMUST00000147605.8 |
||
| CDS-3UTR CCA 90 bp | GCAGCAACAGGAAGTCAGGCAAGGATCTCACAGCCACATTGTAGGAAAATATTCACAACTTTCCTCCTCTaGCCAGCAGTGGTACAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: AATGSQARISQPHCRKIFTTFLL*PAVVQG Trigger: TCCTTGTACCACTGCTGGCCAGAGGAGGAAAGTTGT...GAATATTTTCCTACAATGTGGCTGTGAGATCCTTGCCTGACTTCCTGTTGCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073521.12 ENSMUST00000109109.8 ENSMUST00000147605.8 |
||
| CDS-3UTR TCA 90 bp | AAATCAATGTGTCCTGGAGAAAAGTACACACCATCTGAACATCAATGGAACAGTACGTATGGCACCAGGTaGGAGACCACCTCCACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: KSMCPGEKYTPSEHQWNSTYGTR*ETTSTW Trigger: CCAAGTGGAGGTGGTCTCTCACCTGGTGCCATACGT...ACTGTTCCATTGATGTTCAGATGGTGTGTACTTTTCTCCAGGACACATTGATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134593.2 |
||
| CDS-3UTR TCA 90 bp | CCTCCAAGGGGATACCGTTTAGTATGCTGCATAATAGTGCATTATTTTCAACTGTCTTCCTGGATGGAGTaGGAAGGGCCACAGAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PPRGYRLVCCIIVHYFQLSSWME*EGPQSS Trigger: TGAGCTCTGTGGCCCTTCTCACTCCATCCAGGAAGA...CAGTTGAAAATAATGCACTATTATGCAGCATACTAAACGGTATCCCCTTGGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134593.2 |
||
| CDS-3UTR CCA 90 bp | CAGCCACATTGTAGGAAAATATTCACACCTGTCAGATGCCACTTGCTAAACACTCTTCACGGAGAGCAGTaGCTGTGTCATCTGTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QPHCRKIFTPVRCHLLNTLHGEQ*LCHLCP Trigger: TGGACACAGATGACACAGCCACTGCTCTCCGTGAAG...AGTGTTTAGCAAGTGGCATCTGACAGGTGTGAATATTTTCCTACAATGTGGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066514.13 ENSMUST00000073521.12 ENSMUST00000109109.8 ENSMUST00000147605.8 |
||
| CDS-3UTR CCA 90 bp | TCACAGCCACATTGTAGGAAAATATTCACACCTGTCAGATGCCACTTGCTAAACCTTCACGGAGAGCAGTaGCTGTGTCATCTGTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SQPHCRKIFTPVRCHLLNLHGEQ*LCHLCP Trigger: TGGACACAGATGACACAGCCACTGCTCTCCGTGAAG...GTTTAGCAAGTGGCATCTGACAGGTGTGAATATTTTCCTACAATGTGGCTGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066514.13 ENSMUST00000073521.12 ENSMUST00000109109.8 ENSMUST00000147605.8 |
||
| CDS-3UTR CCA 90 bp | ATATTCACACCTGTCAGATGCCACTTGCTAAACACTGTTGTTCTGAGCATAAGCCTTCACGGAGAGCAGTaGCTGTGTCATCTGTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: IFTPVRCHLLNTVVLSISLHGEQ*LCHLCP Trigger: TGGACACAGATGACACAGCCACTGCTCTCCGTGAAG...GCTTATGCTCAGAACAACAGTGTTTAGCAAGTGGCATCTGACAGGTGTGAATAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066514.13 ENSMUST00000073521.12 ENSMUST00000109109.8 ENSMUST00000147605.8 |
||
| CDS-3UTR CCA 90 bp | TTTAGTGTTCTAAAGCAGCAACAGGAAGTCAGGCAAGGATCTCACAGCCACATTTGGGCCTGGAAGTTGTaGTCTAGAAAACCCACTACG | + |
|
Preference number: 4 (lower is better) Translates to: FSVLKQQQEVRQGSHSHIWAWKL*SRKPTT Trigger: CGTAGTGGGTTTTCTAGACCACAACTTCCAGGCCCA...AATGTGGCTGTGAGATCCTTGCCTGACTTCCTGTTGCTGCTTTAGAACACTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066514.13 ENSMUST00000073521.12 ENSMUST00000109109.8 ENSMUST00000147605.8 |
||
| CDS-3UTR CCA 90 bp | AGTGTTCTAAAGCAGCAACAGGAAGTCAGGCAAGGATCTCACAGCCACATTGTATCATCAGCATTAGGTTaGGCCTGGAAGTTGTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SVLKQQQEVRQGSHSHIVSSALG*AWKLWS Trigger: AGACCACAACTTCCAGGCCCAACCTAATGCTGATGA...TACAATGTGGCTGTGAGATCCTTGCCTGACTTCCTGTTGCTGCTTTAGAACACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066514.13 ENSMUST00000073521.12 ENSMUST00000109109.8 ENSMUST00000147605.8 |
||
| CDS-3UTR CCA 90 bp | GCATTTCAACTAGACTGTCTAGCAAGCAAGCCGATAGCATCCACTTTCTCTACCTCATCAGCATTAGGTTaGGCCTGGAAGTTGTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: AFQLDCLASKPIASTFSTSSALG*AWKLWS Trigger: AGACCACAACTTCCAGGCCCAACCTAATGCTGATGA...GGTAGAGAAAGTGGATGCTATCGGCTTGCTTGCTAGACAGTCTAGTTGAAATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073521.12 |
||
| CDS-3UTR CCA 90 bp | TGTTCTAAAGCAGCAACAGGAAGTCAGGCAAGGATCTCACAGCCACATTGTAGGTTCTCAGGCGAGCCTTaGCATCATCTATCAGATTGT | + |
|
Preference number: 4 (lower is better) Translates to: CSKAATGSQARISQPHCRFSGEP*HHLSDC Trigger: ACAATCTGATAGATGATGCCAAGGCTCGCCTGAGAA...CCTACAATGTGGCTGTGAGATCCTTGCCTGACTTCCTGTTGCTGCTTTAGAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073521.12 ENSMUST00000109109.8 ENSMUST00000147605.8 |
||
| CDS-3UTR TCA 90 bp | TCCCTGCTTCCCTTCCCTAGCCCTGCGATTGCAAACAAGTGTCTAACTTTAAAATTATTAGAGGACAGGTaGGAATATCTGGTCCCGACA | + |
|
Preference number: 4 (lower is better) Translates to: SLLPFPSPAIANKCLTLKLLEDR*EYLVPT Trigger: TGTCGGGACCAGATATTCTCACCTGTCCTCTAATAA...TTTTAAAGTTAGACACTTGTTTGCAATCGCAGGGCTAGGGAAGGGAAGCAGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073521.12 |
||
| CDS-3UTR TCA 90 bp | GCAGCAACAGGAAGTCAGGCAAGGATCTCACAGCCACATTGTAGGAAAATATTCTGTCTGAGCGGACCGTaGACATCAAATACAACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: AATGSQARISQPHCRKIFCLSGP*TSNTTF Trigger: GAAAGTTGTATTTGATGTTCACGGTCCGCTCAGACA...GAATATTTTCCTACAATGTGGCTGTGAGATCCTTGCCTGACTTCCTGTTGCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073521.12 ENSMUST00000109109.8 ENSMUST00000147605.8 |
||
| CDS-3UTR GCA 90 bp | GGTCCCTCCAAGGGGATACCGTTTAGTATGCTGCATAATAGTGCATTATTTTCAGTTCTCCTGGCTCTGTaGCCAGTGTGTTTGGGAATT | + |
|
Preference number: 4 (lower is better) Translates to: GPSKGIPFSMLHNSALFSVLLAL*PVCLGI Trigger: AATTCCCAAACACACTGGGCACAGAGCCAGGAGAAC...TGAAAATAATGCACTATTATGCAGCATACTAAACGGTATCCCCTTGGAGGGACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134593.2 |
||
| CDS-3UTR CCA 90 bp | CCCTCCAAGGGGATACCGTTTAGTATGCTGCATAATAGTGCATTATTTTCAACTCTTCACGGAGAGCAGTaGCTGTGTCATCTGTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PSKGIPFSMLHNSALFSTLHGEQ*LCHLCP Trigger: TGGACACAGATGACACAGCCACTGCTCTCCGTGAAG...AGTTGAAAATAATGCACTATTATGCAGCATACTAAACGGTATCCCCTTGGAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134593.2 |
||
| CDS-3UTR CCA 90 bp | TCACAGCCACATTGTAGGAAAATATTCACACCTGTCAGATGCCACTTGCTAAACTGGGCCTGGAAGTTGTaGTCTAGAAAACCCACTACG | + |
|
Preference number: 4 (lower is better) Translates to: SQPHCRKIFTPVRCHLLNWAWKL*SRKPTT Trigger: CGTAGTGGGTTTTCTAGACCACAACTTCCAGGCCCA...GTTTAGCAAGTGGCATCTGACAGGTGTGAATATTTTCCTACAATGTGGCTGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066514.13 ENSMUST00000073521.12 ENSMUST00000109109.8 ENSMUST00000147605.8 |
||
| CDS-3UTR CCA 90 bp | TTCACACCTGTCAGATGCCACTTGCTAAACACTGTTGTTCTGAGCATAAGCTCATCATCAGCATTAGGTTaGGCCTGGAAGTTGTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: FTPVRCHLLNTVVLSISSSSALG*AWKLWS Trigger: AGACCACAACTTCCAGGCCCAACCTAATGCTGATGA...TGAGCTTATGCTCAGAACAACAGTGTTTAGCAAGTGGCATCTGACAGGTGTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066514.13 ENSMUST00000073521.12 ENSMUST00000109109.8 ENSMUST00000147605.8 |
||
| CDS-3UTR CCA 90 bp | CAGCCACATTGTAGGAAAATATTCACACCTGTCAGATGCCACTTGCTAAACACTACAACTTTCCTCCTCTaGCCAGCAGTGGTACAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: QPHCRKIFTPVRCHLLNTTTFLL*PAVVQG Trigger: TCCTTGTACCACTGCTGGCCAGAGGAGGAAAGTTGT...AGTGTTTAGCAAGTGGCATCTGACAGGTGTGAATATTTTCCTACAATGTGGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073521.12 ENSMUST00000109109.8 ENSMUST00000147605.8 |
||
| CDS-3UTR TCA 90 bp | GTTCTTAAAAATCAATGTGTCCTGGAGAAAAGTACACACCATCTGAACATCAATTTTTGTGGAAGCCCCTaGGAGCTCAGGAGGGCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: VLKNQCVLEKSTHHLNINFCGSP*ELRRAH Trigger: ATGGGCCCTCCTGAGCTCTCAGGGGCTTCCACAAAA...ATTGATGTTCAGATGGTGTGTACTTTTCTCCAGGACACATTGATTTTTAAGAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000134593.2 |
||
| CDS-3UTR GCA 90 bp | GTTCTAAAGCAGCAACAGGAAGTCAGGCAAGGATCTCACAGCCACATTGTAGGATACGGGGGTTACCAGTaGATCATTATCAAATACGTA | + |
|
Preference number: 4 (lower is better) Translates to: VLKQQQEVRQGSHSHIVGYGGYQ*IIIKYV Trigger: TACGTATTTGATAATGATGCACTGGTAACCCCCGTA...TCCTACAATGTGGCTGTGAGATCCTTGCCTGACTTCCTGTTGCTGCTTTAGAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066514.13 ENSMUST00000073521.12 ENSMUST00000109109.8 |
||
| CDS-3UTR GCA 90 bp | GCAGCAACAGGAAGTCAGGCAAGGATCTCACAGCCACATTGTAGGAAAATATTCTTGTACTCGAAGCAATaGATGATGAAATCACGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: AATGSQARISQPHCRKIFLYSKQ*MMKSRP Trigger: TGGCCGTGATTTCATCATGCATTGCTTCGAGTACAA...GAATATTTTCCTACAATGTGGCTGTGAGATCCTTGCCTGACTTCCTGTTGCTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066514.13 ENSMUST00000073521.12 ENSMUST00000109109.8 ENSMUST00000147605.8 |
||
| CDS-3UTR CCA 90 bp | CCTGTCAGATGCCACTTGCTAAACACTGTTGTTCTGAGCATAAGCTCACACAAATTCTCAGGCGAGCCTTaGCATCATCTATCAGATTGT | + |
|
Preference number: 4 (lower is better) Translates to: PVRCHLLNTVVLSISSHKFSGEP*HHLSDC Trigger: ACAATCTGATAGATGATGCCAAGGCTCGCCTGAGAA...TTTGTGTGAGCTTATGCTCAGAACAACAGTGTTTAGCAAGTGGCATCTGACAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073521.12 ENSMUST00000109109.8 ENSMUST00000147605.8 |
||
| CDS-3UTR CCA 90 bp | CCCTCCAAGGGGATACCGTTTAGTATGCTGCATAATAGTGCATTATTTTCAACTTGTGCCCAGTGTGTTTaGGAATTTTGTGGAAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: PSKGIPFSMLHNSALFSTCAQCV*EFCGSP Trigger: GGGGCTTCCACAAAATTCCCAAACACACTGGGCACA...AGTTGAAAATAATGCACTATTATGCAGCATACTAAACGGTATCCCCTTGGAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000134593.2 |
||
| CDS-3UTR TCA 90 bp | CAGCCACATTGTAGGAAAATATTCACACCTGTCAGATGCCACTTGCTAAACACTTGTCTGAGCGGACCGTaGACATCAAATACAACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: QPHCRKIFTPVRCHLLNTCLSGP*TSNTTF Trigger: GAAAGTTGTATTTGATGTTCACGGTCCGCTCAGACA...AGTGTTTAGCAAGTGGCATCTGACAGGTGTGAATATTTTCCTACAATGTGGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073521.12 ENSMUST00000109109.8 ENSMUST00000147605.8 |
||
| CDS-3UTR GCA 90 bp | CAACAGGAAGTCAGGCAAGGATCTCACAGCCACATTGTAGGAAAATATTCACACTTGTACTCGAAGCAATaGATGATGAAATCACGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QQEVRQGSHSHIVGKYSHLYSKQ*MMKSRP Trigger: TGGCCGTGATTTCATCATGCATTGCTTCGAGTACAA...GTGTGAATATTTTCCTACAATGTGGCTGTGAGATCCTTGCCTGACTTCCTGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066514.13 ENSMUST00000073521.12 ENSMUST00000109109.8 ENSMUST00000147605.8 |
||
| CDS-3UTR GCA 90 bp | AGTGCCTACTATGTGACAGATATCCCTAATATGACTAAAAATCGTGCCATTTTTTACGGGGGTTACCAGTaGATCATTCTCCTCCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SAYYVTDIPNMTKNRAIFYGGYQ*IILLLG Trigger: GCCCAGGAGGAGAATGATGCACTGGTAACCCCCGTA...AAAAATGGCACGATTTTTAGTCATATTAGGGATATCTGTCACATAGTAGGCACT 43% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000147605.8 |
||
| CDS-3UTR CCA 90 bp | CCAAGGGGATACCGTTTAGTATGCTGCATAATAGTGCATTATTTTCAACTGAGTCTCTTTCTTCCTGGATaGAGTGAGAAGGGCCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: PRGYRLVCCIIVHYFQLSLFLPG*SEKGHR Trigger: TCTGTGGCCCTTCTCACTCCATCCAGGAAGAAAGAG...ACTCAGTTGAAAATAATGCACTATTATGCAGCATACTAAACGGTATCCCCTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134593.2 |
||
| CDS-3UTR GCA 90 bp | TTTGTGCTCGAAATAGGTGTTTTATTTGCCTTTAGCACACTGGGAGATGGCTGGTACGGGGGTTACCAGTaGATCATTATCAAATACGTA | + |
|
Preference number: 4 (lower is better) Translates to: FVLEIGVLFAFSTLGDGWYGGYQ*IIIKYV Trigger: TACGTATTTGATAATGATGCACTGGTAACCCCCGTA...CCAGCCATCTCCCAGTGTGCTAAAGGCAAATAAAACACCTATTTCGAGCACAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073521.12 |
||
| CDS-3UTR CCA 90 bp | TGTAGGAAAATATTCACACCTGTCAGATGCCACTTGCTAAACACTGTTGTTCTGGCATTAGGTTGGGCCTaGAAGTTGTGGTCTAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: CRKIFTPVRCHLLNTVVLALGWA*KLWSRK Trigger: TTTTCTAGACCACAACTTCCAGGCCCAACCTAATGC...CAGAACAACAGTGTTTAGCAAGTGGCATCTGACAGGTGTGAATATTTTCCTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066514.13 ENSMUST00000073521.12 ENSMUST00000109109.8 ENSMUST00000147605.8 |
||
| CDS-3UTR CCA 90 bp | CCACATTGTAGGAAAATATTCACACCTGTCAGATGCCACTTGCTAAACACTGTTGCATTAGGTTGGGCCTaGAAGTTGTGGTCTAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: PHCRKIFTPVRCHLLNTVALGWA*KLWSRK Trigger: TTTTCTAGACCACAACTTCCAGGCCCAACCTAATGC...AACAGTGTTTAGCAAGTGGCATCTGACAGGTGTGAATATTTTCCTACAATGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066514.13 ENSMUST00000073521.12 ENSMUST00000109109.8 ENSMUST00000147605.8 |
||
| CDS-3UTR CCA 90 bp | GAAAATATTCACACCTGTCAGATGCCACTTGCTAAACACTGTTGTTCTGAGCATTTCTCAGGCGAGCCTTaGCATCATCTATCAGATTGT | + |
|
Preference number: 4 (lower is better) Translates to: ENIHTCQMPLAKHCCSEHFSGEP*HHLSDC Trigger: ACAATCTGATAGATGATGCCAAGGCTCGCCTGAGAA...ATGCTCAGAACAACAGTGTTTAGCAAGTGGCATCTGACAGGTGTGAATATTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073521.12 ENSMUST00000109109.8 ENSMUST00000147605.8 |
||
| CDS-3UTR CCA 90 bp | GTCCCTCCAAGGGGATACCGTTTAGTATGCTGCATAATAGTGCATTATTTTCAATTCTCAGGCGAGCCTTaGCATCATCTATCAGATTGT | + |
|
Preference number: 4 (lower is better) Translates to: VPPRGYRLVCCIIVHYFQFSGEP*HHLSDC Trigger: ACAATCTGATAGATGATGCCAAGGCTCGCCTGAGAA...TTGAAAATAATGCACTATTATGCAGCATACTAAACGGTATCCCCTTGGAGGGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134593.2 |
||
| CDS-3UTR CCA 90 bp | CTTAAAAATCAATGTGTCCTGGAGAAAAGTACACACCATCTGAACATCAATGGAACAACTTTCCTCCTCTaGCCAGCAGTGGTACAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LKNQCVLEKSTHHLNINGTTFLL*PAVVQG Trigger: TCCTTGTACCACTGCTGGCCAGAGGAGGAAAGTTGT...TCCATTGATGTTCAGATGGTGTGTACTTTTCTCCAGGACACATTGATTTTTAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000134593.2 |
||
| CDS-3UTR CCA 90 bp | AAATCAATGTGTCCTGGAGAAAAGTACACACCATCTGAACATCAATGGAACAGTTGTTTGGGAATTTTGTaGAAGCCCCTGAGAGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: KSMCPGEKYTPSEHQWNSCLGIL*KPLRAQ Trigger: CTGAGCTCTCAGGGGCTTCCACAAAATTCCCAAACA...ACTGTTCCATTGATGTTCAGATGGTGTGTACTTTTCTCCAGGACACATTGATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000134593.2 |
||
| CDS-3UTR TCA 90 bp | AAATCAATGTGTCCTGGAGAAAAGTACACACCATCTGAACATCAATGGAACAGTTGTCTGAGCGGACCGTaGACATCAAATACAACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: KSMCPGEKYTPSEHQWNSCLSGP*TSNTTF Trigger: GAAAGTTGTATTTGATGTTCACGGTCCGCTCAGACA...ACTGTTCCATTGATGTTCAGATGGTGTGTACTTTTCTCCAGGACACATTGATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134593.2 |
||
| CDS-3UTR GCA 90 bp | AGGAAAATATTCACACCTGTCAGATGCCACTTGCTAAACACTGTTGTTCTGAGCTACGGGGGTTACCAGTaGATCATTATCAAATACGTA | + |
|
Preference number: 4 (lower is better) Translates to: RKIFTPVRCHLLNTVVLSYGGYQ*IIIKYV Trigger: TACGTATTTGATAATGATGCACTGGTAACCCCCGTA...GCTCAGAACAACAGTGTTTAGCAAGTGGCATCTGACAGGTGTGAATATTTTCCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066514.13 ENSMUST00000073521.12 ENSMUST00000109109.8 |
||
| CDS-3UTR CCA 90 bp | ACAGAAAGCCTCAGAGATGCCTGGTTCCATATTCTCAATTTTAGGATAACAAGTGCATTAGGTTGGGCCTaGAAGTTGTGGTCTAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: TESLRDAWFHILNFRITSALGWA*KLWSRK Trigger: TTTTCTAGACCACAACTTCCAGGCCCAACCTAATGC...ACTTGTTATCCTAAAATTGAGAATATGGAACCAGGCATCTCTGAGGCTTTCTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073521.12 |
||
| CDS-3UTR CCA 90 bp | AGTGCCTACTATGTGACAGATATCCCTAATATGACTAAAAATCGTGCCATTTTTGCATTAGGTTGGGCCTaGAAGTTGTGGTCTAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: SAYYVTDIPNMTKNRAIFALGWA*KLWSRK Trigger: TTTTCTAGACCACAACTTCCAGGCCCAACCTAATGC...AAAAATGGCACGATTTTTAGTCATATTAGGGATATCTGTCACATAGTAGGCACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000066514.13 ENSMUST00000073521.12 ENSMUST00000109109.8 ENSMUST00000147605.8 |
||
| CDS TCA 90 bp | GGAGGGCCCATGCCAGTCCTTACATCAAATACGTATGGCACCAGGTaGGAGACCACCTCCACTTGGTGGGGATGCAGCCCCACCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GGPMPVLTSNTYGTR*ETTSTWWGCSPTSS Trigger: GGAGGAGGTGGGGCTGCATCCCCACCAAGTGGAGGTGGTCTCTCACCTGGTGCCATACGTATTTGATGTAAGGACTGGCATGGGCCCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134593.2 |
||
| CDS TCA 90 bp | CTCTTTCCTCCAGGGAAGCAGACTTCTCCAGGTTCCCTTTTCAGCTaGCAGGCTCCGGGAGTCCACAAGGTCGCGACATCAGCCCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LFPPGKQTSPGSLFS*QAPGVHKVATSALQ Trigger: CTGCAGGGCTGATGTCGCGACCTTGTGGACTCCCGGAGCCTGTCAGCTGAAAAGGGAACCTGGAGAAGTCTGCTTCCCTGGAGGAAAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066514.13 |
||
| CDS-3UTR CAA 90 bp | GCCCCCTCCCGCACACATCACAGAGGCTTTCACGCACGGAATCAGAGCTGGGGAGGTTGGGCCTGGAAGTaGTGGTCTAGAAAACCCACT | + |
|
Preference number: 5 (lower is better) Translates to: APSRTHHRGFHARNQSWGGWAWK*WSRKPT Trigger: AGTGGGTTTTCTAGACCACAACTTCCAGGCCCAACC...TCCCCAGCTCTGATTCCGTGCGTGAAAGCCTCTGTGATGTGTGCGGGAGGGGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000073521.12 |
||
| CDS CCA 90 bp | TCTAGAAAACCCACTACGGGGGTTACCAGTGCATCATTCTCCTCCTaGGCTTCACGGAGAGCAGTGGCTGTGTCATCTGTGTCCACCGGG | + |
|
Preference number: 5 (lower is better) Translates to: SRKPTTGVTSASFSS*ASRRAVAVSSVSTG Trigger: CCCGGTGGACACAGATGACACAGCCACTGCTCTCCGTGAAGCCCAGGAGGAGAATGATGCACTGGTAACCCCCGTAGTGGGTTTTCTAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147605.8 |
||
| CDS-3UTR CAA 90 bp | GCCCCCTCCCGCACACATCACAGAGGCTTTCACGCACGGAATCAGAGCTGGGGACCAACACAGCCAGTTTaGAGGTCATTCCCTGGATTA | + |
|
Preference number: 5 (lower is better) Translates to: APSRTHHRGFHARNQSWGPTQPV*RSFPGL Trigger: TAATCCAGGGAATGACCTCAAAACTGGCTGTGTTGG...TCCCCAGCTCTGATTCCGTGCGTGAAAGCCTCTGTGATGTGTGCGGGAGGGGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073521.12 |
||
| CDS TCA 90 bp | TCCTGGCTCTGTGCCCAGTGTGTTTGGGAATTTTGTGGAAGCCCCTaGGAGCTCAGGAGGGCCCATGCCAGTCCTTACATCAAATACGTA | + |
|
Preference number: 5 (lower is better) Translates to: SWLCAQCVWEFCGSP*ELRRAHASPYIKYV Trigger: TACGTATTTGATGTAAGGACTGGCATGGGCCCTCCTGAGCTCTCAGGGGCTTCCACAAAATTCCCAAACACACTGGGCACAGAGCCAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134593.2 |
||
| CDS GCA 90 bp | CACAAAGAACAGAGTCCACACAAGGACTCAGTTCTCCTGGCTCTGTaGCCAGTGTGTTTGGGAATTTTGTGGAAGCCCCTGAGAGCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: HKEQSPHKDSVLLAL*PVCLGILWKPLRAQ Trigger: CTGAGCTCTCAGGGGCTTCCACAAAATTCCCAAACACACTGGGCACAGAGCCAGGAGAACTGAGTCCTTGTGTGGACTCTGTTCTTTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134593.2 |
||
| CDS TCA 90 bp | AGCAGACTTCTCCAGGTTCCCTTTTCAGCTTGTCTGAGCGGACCGTaGACATCAAATACAACTTTCCTCCTCTGGCCAGCAGTGGTACAA | + |
|
Preference number: 5 (lower is better) Translates to: SRLLQVPFSACLSGP*TSNTTFLLWPAVVQ Trigger: TTGTACCACTGCTGGCCAGAGGAGGAAAGTTGTATTTGATGTTCACGGTCCGCTCAGACAAGCTGAAAAGGGAACCTGGAGAAGTCTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000073521.12 ENSMUST00000109109.8 ENSMUST00000134593.2 ENSMUST00000147605.8 |
||
| CDS CCA 90 bp | GGCACAAAGAAGACTTCCTTCACTTCATCAGCATTAGGTTGGGCCTaGAAGTTGTGGTCTAGAAAACCCACTACGGGGGTTACCAGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: GTKKTSFTSSALGWA*KLWSRKPTTGVTSA Trigger: TGCACTGGTAACCCCCGTAGTGGGTTTTCTAGACCACAACTTCCAGGCCCAACCTAATGCTGATGAAGTGAAGGAAGTCTTCTTTGTGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000066514.13 ENSMUST00000073521.12 ENSMUST00000109109.8 ENSMUST00000147605.8 |
||
| CDS-3UTR CAA 90 bp | TGTTCTAAAGCAGCAACAGGAAGTCAGGCAAGGATCTCACAGCCACATTGTAGGGGTTGGGCCTGGAAGTaGTGGTCTAGAAAACCCACT | + |
|
Preference number: 5 (lower is better) Translates to: CSKAATGSQARISQPHCRGWAWK*WSRKPT Trigger: AGTGGGTTTTCTAGACCACAACTTCCAGGCCCAACC...CCTACAATGTGGCTGTGAGATCCTTGCCTGACTTCCTGTTGCTGCTTTAGAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066514.13 ENSMUST00000073521.12 ENSMUST00000109109.8 ENSMUST00000147605.8 |
||
| CDS CCA 90 bp | TCCAAAGGCACAAAGAAGACTTCCTTCACTTCATCAGCATTAGGTTaGGCCTGGAAGTTGTGGTCTAGAAAACCCACTACGGGGGTTACC | + |
|
Preference number: 5 (lower is better) Translates to: SKGTKKTSFTSSALG*AWKLWSRKPTTGVT Trigger: GGTAACCCCCGTAGTGGGTTTTCTAGACCACAACTTCCAGGCCCAACCTAATGCTGATGAAGTGAAGGAAGTCTTCTTTGTGCCTTTGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000066514.13 ENSMUST00000073521.12 ENSMUST00000109109.8 ENSMUST00000147605.8 |
||
| CDS CCA 90 bp | AAGACTTCCTTCACTTCATCAGCATTAGGTTGGGCCTGGAAGTTGTaGTCTAGAAAACCCACTACGGGGGTTACCAGTGCATCATTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: KTSFTSSALGWAWKL*SRKPTTGVTSASFS Trigger: GGAGAATGATGCACTGGTAACCCCCGTAGTGGGTTTTCTAGACCACAACTTCCAGGCCCAACCTAATGCTGATGAAGTGAAGGAAGTCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147605.8 |
||
| CDS CCA 90 bp | AAGACTTCCTTCACTTCATCAGCATTAGGTTGGGCCTGGAAGTTGTaGTCTAGAAAACCCACTACGGGGGTTACCAGTGCATCATTATCA | + |
|
Preference number: 5 (lower is better) Translates to: KTSFTSSALGWAWKL*SRKPTTGVTSASLS Trigger: TGATAATGATGCACTGGTAACCCCCGTAGTGGGTTTTCTAGACCACAACTTCCAGGCCCAACCTAATGCTGATGAAGTGAAGGAAGTCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066514.13 ENSMUST00000073521.12 ENSMUST00000109109.8 |
||
| CDS-3UTR CAA 90 bp | AGTGTTCTAAAGCAGCAACAGGAAGTCAGGCAAGGATCTCACAGCCACATTGTACTTCTGGTAGTAGACTaGGGGATGGAGGAAATAGTC | + |
|
Preference number: 5 (lower is better) Translates to: SVLKQQQEVRQGSHSHIVLLVVD*GMEEIV Trigger: GACTATTTCCTCCATCCCCAAGTCTACTACCAGAAG...TACAATGTGGCTGTGAGATCCTTGCCTGACTTCCTGTTGCTGCTTTAGAACACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066514.13 ENSMUST00000073521.12 ENSMUST00000109109.8 ENSMUST00000147605.8 |
||
| CDS-3UTR CAA 90 bp | GCAGCAACAGGAAGTCAGGCAAGGATCTCACAGCCACATTGTAGGAAAATATTCCCAACACAGCCAGTTTaGAGGTCATTCCCTGGATTA | + |
|
Preference number: 5 (lower is better) Translates to: AATGSQARISQPHCRKIFPTQPV*RSFPGL Trigger: TAATCCAGGGAATGACCTCAAAACTGGCTGTGTTGG...GAATATTTTCCTACAATGTGGCTGTGAGATCCTTGCCTGACTTCCTGTTGCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066514.13 ENSMUST00000073521.12 ENSMUST00000109109.8 ENSMUST00000147605.8 |
||
| CDS-3UTR CAA 90 bp | TTCACACCTGTCAGATGCCACTTGCTAAACACTGTTGTTCTGAGCATAAGCTCAGCATCATCTATCAGATaGTTTCTGACAGGCTCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: FTPVRCHLLNTVVLSISSASSIR*FLTGSG Trigger: CCCGGAGCCTGTCAGAAACAATCTGATAGATGATGC...TGAGCTTATGCTCAGAACAACAGTGTTTAGCAAGTGGCATCTGACAGGTGTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073521.12 ENSMUST00000147605.8 |
||
| CDS-3UTR CAA 90 bp | TGTAGGAAAATATTCACACCTGTCAGATGCCACTTGCTAAACACTGTTGTTCTGGGTTGGGCCTGGAAGTaGTGGTCTAGAAAACCCACT | + |
|
Preference number: 5 (lower is better) Translates to: CRKIFTPVRCHLLNTVVLGWAWK*WSRKPT Trigger: AGTGGGTTTTCTAGACCACAACTTCCAGGCCCAACC...CAGAACAACAGTGTTTAGCAAGTGGCATCTGACAGGTGTGAATATTTTCCTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066514.13 ENSMUST00000073521.12 ENSMUST00000109109.8 ENSMUST00000147605.8 |
||
| CDS-3UTR CAA 90 bp | GAAAATATTCACACCTGTCAGATGCCACTTGCTAAACACTGTTGTTCTGAGCATGGTTGGGCCTGGAAGTaGTGGTCTAGAAAACCCACT | + |
|
Preference number: 5 (lower is better) Translates to: ENIHTCQMPLAKHCCSEHGWAWK*WSRKPT Trigger: AGTGGGTTTTCTAGACCACAACTTCCAGGCCCAACC...ATGCTCAGAACAACAGTGTTTAGCAAGTGGCATCTGACAGGTGTGAATATTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066514.13 ENSMUST00000073521.12 ENSMUST00000109109.8 ENSMUST00000147605.8 |
||
| CDS-3UTR CAA 90 bp | CAGCCACATTGTAGGAAAATATTCACACCTGTCAGATGCCACTTGCTAAACACTTTCATCAGCATTAGGTaGGGCCTGGAAGTTGTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: QPHCRKIFTPVRCHLLNTFISIR*GLEVVV Trigger: GACCACAACTTCCAGGCCCAACCTAATGCTGATGAA...AGTGTTTAGCAAGTGGCATCTGACAGGTGTGAATATTTTCCTACAATGTGGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066514.13 ENSMUST00000073521.12 ENSMUST00000109109.8 ENSMUST00000147605.8 |
||
| CDS-3UTR CAA 90 bp | CCTGTCAGATGCCACTTGCTAAACACTGTTGTTCTGAGCATAAGCTCACACAAACTTCTGGTAGTAGACTaGGGGATGGAGGAAATAGTC | + |
|
Preference number: 5 (lower is better) Translates to: PVRCHLLNTVVLSISSHKLLVVD*GMEEIV Trigger: GACTATTTCCTCCATCCCCAAGTCTACTACCAGAAG...TTTGTGTGAGCTTATGCTCAGAACAACAGTGTTTAGCAAGTGGCATCTGACAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066514.13 ENSMUST00000073521.12 ENSMUST00000109109.8 ENSMUST00000147605.8 |
||
| CDS-3UTR CAA 90 bp | TTTAGTGTTCTAAAGCAGCAACAGGAAGTCAGGCAAGGATCTCACAGCCACATTCCAACACAGCCAGTTTaGAGGTCATTCCCTGGATTA | + |
|
Preference number: 5 (lower is better) Translates to: FSVLKQQQEVRQGSHSHIPTQPV*RSFPGL Trigger: TAATCCAGGGAATGACCTCAAAACTGGCTGTGTTGG...AATGTGGCTGTGAGATCCTTGCCTGACTTCCTGTTGCTGCTTTAGAACACTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066514.13 ENSMUST00000073521.12 ENSMUST00000109109.8 ENSMUST00000147605.8 |
||
| CDS-3UTR CAA 90 bp | GGTCCCTCCAAGGGGATACCGTTTAGTATGCTGCATAATAGTGCATTATTTTCAGTGTGTTTGGGAATTTaGTGGAAGCCCCTGAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: GPSKGIPFSMLHNSALFSVCLGI*WKPLRA Trigger: AGCTCTCAGGGGCTTCCACAAAATTCCCAAACACAC...TGAAAATAATGCACTATTATGCAGCATACTAAACGGTATCCCCTTGGAGGGACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000134593.2 |
||
| CDS-3UTR CAA 90 bp | CAGCCACATTGTAGGAAAATATTCACACCTGTCAGATGCCACTTGCTAAACACTCTTCTGGTAGTAGACTaGGGGATGGAGGAAATAGTC | + |
|
Preference number: 5 (lower is better) Translates to: QPHCRKIFTPVRCHLLNTLLVVD*GMEEIV Trigger: GACTATTTCCTCCATCCCCAAGTCTACTACCAGAAG...AGTGTTTAGCAAGTGGCATCTGACAGGTGTGAATATTTTCCTACAATGTGGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066514.13 ENSMUST00000073521.12 ENSMUST00000109109.8 ENSMUST00000147605.8 |
||
| CDS-3UTR CAA 90 bp | AGGAAAATATTCACACCTGTCAGATGCCACTTGCTAAACACTGTTGTTCTGAGCCCAACACAGCCAGTTTaGAGGTCATTCCCTGGATTA | + |
|
Preference number: 5 (lower is better) Translates to: RKIFTPVRCHLLNTVVLSPTQPV*RSFPGL Trigger: TAATCCAGGGAATGACCTCAAAACTGGCTGTGTTGG...GCTCAGAACAACAGTGTTTAGCAAGTGGCATCTGACAGGTGTGAATATTTTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066514.13 ENSMUST00000073521.12 ENSMUST00000109109.8 ENSMUST00000147605.8 |
||
| CDS-3UTR CAA 90 bp | TGTAGGAAAATATTCACACCTGTCAGATGCCACTTGCTAAACACTGTTGTTCTGGCATCATCTATCAGATaGTTTCTGACAGGCTCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: CRKIFTPVRCHLLNTVVLASSIR*FLTGSG Trigger: CCCGGAGCCTGTCAGAAACAATCTGATAGATGATGC...CAGAACAACAGTGTTTAGCAAGTGGCATCTGACAGGTGTGAATATTTTCCTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073521.12 ENSMUST00000147605.8 |
||
| CDS-3UTR CAA 90 bp | CTTAAAAATCAATGTGTCCTGGAGAAAAGTACACACCATCTGAACATCAATGGAGCATCATCTATCAGATaGTTTCTGACAGGCTCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: LKNQCVLEKSTHHLNINGASSIR*FLTGSG Trigger: CCCGGAGCCTGTCAGAAACAATCTGATAGATGATGC...TCCATTGATGTTCAGATGGTGTGTACTTTTCTCCAGGACACATTGATTTTTAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000134593.2 |
||
| CDS-3UTR CAA 90 bp | GTTCTTAAAAATCAATGTGTCCTGGAGAAAAGTACACACCATCTGAACATCAATCTGTGCCCAGTGTGTTaGGGAATTTTGTGGAAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: VLKNQCVLEKSTHHLNINLCPVC*GILWKP Trigger: GGGCTTCCACAAAATTCCCAAACACACTGGGCACAG...ATTGATGTTCAGATGGTGTGTACTTTTCTCCAGGACACATTGATTTTTAAGAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000134593.2 |
||
| CDS-3UTR CAA 90 bp | AGGAAAATATTCACACCTGTCAGATGCCACTTGCTAAACACTGTTGTTCTGAGCAGATCAAAATCAATCTaGAAGGCAGGACTTTGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: RKIFTPVRCHLLNTVVLSRSKSI*KAGLCS Trigger: GGAACAAAGTCCTGCCTTCAAGATTGATTTTGATCT...GCTCAGAACAACAGTGTTTAGCAAGTGGCATCTGACAGGTGTGAATATTTTCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066514.13 ENSMUST00000073521.12 ENSMUST00000109109.8 ENSMUST00000147605.8 |
||
| CDS-3UTR CAA 90 bp | TCACAGCCACATTGTAGGAAAATATTCACACCTGTCAGATGCCACTTGCTAAACAGATCAAAATCAATCTaGAAGGCAGGACTTTGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SQPHCRKIFTPVRCHLLNRSKSI*KAGLCS Trigger: GGAACAAAGTCCTGCCTTCAAGATTGATTTTGATCT...GTTTAGCAAGTGGCATCTGACAGGTGTGAATATTTTCCTACAATGTGGCTGTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066514.13 ENSMUST00000073521.12 ENSMUST00000109109.8 ENSMUST00000147605.8 |
||
| CDS-3UTR CAA 90 bp | GAAAATATTCACACCTGTCAGATGCCACTTGCTAAACACTGTTGTTCTGAGCATAGATCAAAATCAATCTaGAAGGCAGGACTTTGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: ENIHTCQMPLAKHCCSEHRSKSI*KAGLCS Trigger: GGAACAAAGTCCTGCCTTCAAGATTGATTTTGATCT...ATGCTCAGAACAACAGTGTTTAGCAAGTGGCATCTGACAGGTGTGAATATTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066514.13 ENSMUST00000073521.12 ENSMUST00000109109.8 ENSMUST00000147605.8 |
||
| CDS-3UTR CAA 90 bp | ACAGAAAGCCTCAGAGATGCCTGGTTCCATATTCTCAATTTTAGGATAACAAGTAGATCAAAATCAATCTaGAAGGCAGGACTTTGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: TESLRDAWFHILNFRITSRSKSI*KAGLCS Trigger: GGAACAAAGTCCTGCCTTCAAGATTGATTTTGATCT...ACTTGTTATCCTAAAATTGAGAATATGGAACCAGGCATCTCTGAGGCTTTCTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073521.12 |
||
| CDS CCA 72 bp | ACCTCCACTTGGTGGGGATGCAGCCCCACCTCCTCCTaGGCTTCACGGAGAGCAGTGGCTGTGTCATCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: TSTWWGCSPTSS*ASRRAVAVSSV Trigger: CACAGATGACACAGCCACTGCTCTCCGTGAAGCCCAGGAGGAGGTGGGGCTGCATCCCCACCAAGTGGAGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066514.13 ENSMUST00000073521.12 ENSMUST00000109109.8 ENSMUST00000134593.2 |
||
| CDS CCA 72 bp | CCCACTACGGGGGTTACCAGTGCATCATTCTCCTCCTaGGCTTCACGGAGAGCAGTGGCTGTGTCATCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: PTTGVTSASFSS*ASRRAVAVSSV Trigger: CACAGATGACACAGCCACTGCTCTCCGTGAAGCCCAGGAGGAGAATGATGCACTGGTAACCCCCGTAGTGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147605.8 |
||
| CDS CCA 72 bp | AGGAGGGCCCATGCCAGTCCTTACATCAAATACGTATaGCACCAGGTGAGAGACCACCTCCACTTGGTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: RRAHASPYIKYV*HQVRDHLHLVG Trigger: CCCCACCAAGTGGAGGTGGTCTCTCACCTGGTGCCATACGTATTTGATGTAAGGACTGGCATGGGCCCTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134593.2 |
||
| CDS TCA 72 bp | ATGCCAGTCCTTACATCAAATACGTATGGCACCAGGTaGGAGACCACCTCCACTTGGTGGGGATGCAGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: MPVLTSNTYGTR*ETTSTWWGCSP Trigger: GGGGCTGCATCCCCACCAAGTGGAGGTGGTCTCTCACCTGGTGCCATACGTATTTGATGTAAGGACTGGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134593.2 |
||
| CDS TCA 72 bp | ACCAGTGCATCATTATCAAATACGTATGGCACCAGGTaGGAGACCACCTCCACTTGGTGGGGATGCAGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: TSASLSNTYGTR*ETTSTWWGCSP Trigger: GGGGCTGCATCCCCACCAAGTGGAGGTGGTCTCTCACCTGGTGCCATACGTATTTGATAATGATGCACTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066514.13 ENSMUST00000073521.12 ENSMUST00000109109.8 |
||
| CDS GCA 72 bp | CAGAGTCCACACAAGGACTCAGTTCTCCTGGCTCTGTaGCCAGTGTGTTTGGGAATTTTGTGGAAGCCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: QSPHKDSVLLAL*PVCLGILWKPL Trigger: CAGGGGCTTCCACAAAATTCCCAAACACACTGGGCACAGAGCCAGGAGAACTGAGTCCTTGTGTGGACTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134593.2 |
||
| CDS TCA 72 bp | GCCTTGGCATCATCTATCAGATTGTTTCCCAAAACCTaGCTCGGTGACTTTGAGGTGAGGCCCGAGGGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: ALASSIRLFPKT*LGDFEVRPEGE Trigger: CTCACCCTCGGGCCTCACCTCAAAGTCACCGAGTCAGGTTTTGGGAAACAATCTGATAGATGATGCCAAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109109.8 |
||
| CDS GCA 72 bp | ATTTTGTGGAAGCCCCTGAGAGCTCAGGAGGGCCCATaGCAGTCCTTACATCAAATACGTATGGCACCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: ILWKPLRAQEGP*QSLHQIRMAPG Trigger: ACCTGGTGCCATACGTATTTGATGTAAGGACTGGCATGGGCCCTCCTGAGCTCTCAGGGGCTTCCACAAAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134593.2 |
||
| CDS TCA 72 bp | CTCCAGGTTCCCTTTTCAGCTTGTCTGAGCGGACCGTaGACATCAAATACAACTTTCCTCCTCTGGCCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: LQVPFSACLSGP*TSNTTFLLWPA Trigger: TGCTGGCCAGAGGAGGAAAGTTGTATTTGATGTTCACGGTCCGCTCAGACAAGCTGAAAAGGGAACCTGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000073521.12 ENSMUST00000109109.8 ENSMUST00000134593.2 ENSMUST00000147605.8 |
||
| CDS CAA 90 bp | CTCTTTCCTCCAGGGAAGCAGACTTCTCCAGGTTCCCTTTTCAGCTaGTCTGAGCGGACCGTGAACATCAAATACAACTTTCCTCCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: LFPPGKQTSPGSLFS*SERTVNIKYNFPPL Trigger: CAGAGGAGGAAAGTTGTATTTGATGTTCACGGTCCGCTCAGACAAGCTGAAAAGGGAACCTGGAGAAGTCTGCTTCCCTGGAGGAAAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000073521.12 ENSMUST00000109109.8 ENSMUST00000134593.2 ENSMUST00000147605.8 |
||
| CDS CCA 72 bp | TTCACTTCATCAGCATTAGGTTGGGCCTGGAAGTTGTaGTCTAGAAAACCCACTACGGGGGTTACCAGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: FTSSALGWAWKL*SRKPTTGVTSA Trigger: TGCACTGGTAACCCCCGTAGTGGGTTTTCTAGACCACAACTTCCAGGCCCAACCTAATGCTGATGAAGTGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000066514.13 ENSMUST00000073521.12 ENSMUST00000109109.8 ENSMUST00000147605.8 |
||
| CDS CAA 72 bp | TCCTTCACTTCATCAGCATTAGGTTGGGCCTGGAAGTaGTGGTCTAGAAAACCCACTACGGGGGTTACCAGT | + |
|
Preference number: 6 (lower is better) Translates to: SFTSSALGWAWK*WSRKPTTGVTS Trigger: ACTGGTAACCCCCGTAGTGGGTTTTCTAGACCACAACTTCCAGGCCCAACCTAATGCTGATGAAGTGAAGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000066514.13 ENSMUST00000073521.12 ENSMUST00000109109.8 ENSMUST00000147605.8 |
||
| CDS TCA 72 bp | GAAGCAGACTTCTCCAGGTTCCCTTTTCAGCTTGTCTaGGCGGACCGTGAACATCAAATACAACTTTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: EADFSRFPFQLV*ADREHQIQLSS Trigger: GGAGGAAAGTTGTATTTGATGTTCACGGTCCGCTCAGACAAGCTGAAAAGGGAACCTGGAGAAGTCTGCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000073521.12 ENSMUST00000109109.8 ENSMUST00000134593.2 ENSMUST00000147605.8 |
||
| CDS CCA 72 bp | AAGACTTCCTTCACTTCATCAGCATTAGGTTGGGCCTaGAAGTTGTGGTCTAGAAAACCCACTACGGGGGTT | + |
|
Preference number: 6 (lower is better) Translates to: KTSFTSSALGWA*KLWSRKPTTGV Trigger: AACCCCCGTAGTGGGTTTTCTAGACCACAACTTCCAGGCCCAACCTAATGCTGATGAAGTGAAGGAAGTCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000066514.13 ENSMUST00000073521.12 ENSMUST00000109109.8 ENSMUST00000147605.8 |
||
| CDS CCA 72 bp | ACAAAGAACAGAGTCCACACAAGGACTCAGTTCTCCTaGCTCTGTGCCCAGTGTGTTTGGGAATTTTGTGGA | + |
|
Preference number: 6 (lower is better) Translates to: TKNRVHTRTQFS*LCAQCVWEFCG Trigger: TCCACAAAATTCCCAAACACACTGGGCACAGAGCCAGGAGAACTGAGTCCTTGTGTGGACTCTGTTCTTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134593.2 |
||
| CDS CAA 90 bp | AAGAAGACTTCCTTCACTTCATCAGCATTAGGTTGGGCCTGGAAGTaGTGGTCTAGAAAACCCACTACGGGGGTTACCAGTGCATCATTC | + |
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Preference number: 6 (lower is better) Translates to: KKTSFTSSALGWAWK*WSRKPTTGVTSASF Trigger: GAATGATGCACTGGTAACCCCCGTAGTGGGTTTTCTAGACCACAACTTCCAGGCCCAACCTAATGCTGATGAAGTGAAGGAAGTCTTCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147605.8 |
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| CDS CAA 90 bp | AAGAAGACTTCCTTCACTTCATCAGCATTAGGTTGGGCCTGGAAGTaGTGGTCTAGAAAACCCACTACGGGGGTTACCAGTGCATCATTA | + |
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Preference number: 6 (lower is better) Translates to: KKTSFTSSALGWAWK*WSRKPTTGVTSASL Trigger: TAATGATGCACTGGTAACCCCCGTAGTGGGTTTTCTAGACCACAACTTCCAGGCCCAACCTAATGCTGATGAAGTGAAGGAAGTCTTCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066514.13 ENSMUST00000073521.12 ENSMUST00000109109.8 |
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| CDS CAA 90 bp | GATGAAATCACGGCCAGACTGTGTGATTTGCTTCTGGTAGTAGACTaGGGGATGGAGGAAATAGTCCAAAGGCACAAAGAAGACTTCCTT | + |
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Preference number: 6 (lower is better) Translates to: DEITARLCDLLLVVD*GMEEIVQRHKEDFL Trigger: AAGGAAGTCTTCTTTGTGCCTTTGGACTATTTCCTCCATCCCCAAGTCTACTACCAGAAGCAAATCACACAGTCTGGCCGTGATTTCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066514.13 ENSMUST00000073521.12 ENSMUST00000109109.8 ENSMUST00000147605.8 |
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| CDS CCA 72 bp | ACAAAGAAGACTTCCTTCACTTCATCAGCATTAGGTTaGGCCTGGAAGTTGTGGTCTAGAAAACCCACTACG | + |
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Preference number: 6 (lower is better) Translates to: TKKTSFTSSALG*AWKLWSRKPTT Trigger: CGTAGTGGGTTTTCTAGACCACAACTTCCAGGCCCAACCTAATGCTGATGAAGTGAAGGAAGTCTTCTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066514.13 ENSMUST00000073521.12 ENSMUST00000109109.8 ENSMUST00000147605.8 |
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| CDS CAA 72 bp | GCAATGCATGATGAAATCACGGCCAGACTGTGTGATTaGCTTCTGGTAGTAGACTTGGGGATGGAGGAAATA | + |
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Preference number: 6 (lower is better) Translates to: AMHDEITARLCD*LLVVDLGMEEI Trigger: TATTTCCTCCATCCCCAAGTCTACTACCAGAAGCAAATCACACAGTCTGGCCGTGATTTCATCATGCATTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066514.13 ENSMUST00000073521.12 ENSMUST00000109109.8 ENSMUST00000147605.8 |
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| CDS TCA 72 bp | AGTGGTACAAGGACAGAGAATTTATTAGAGGACAGGTaGGAATATCTGGTCCCGACATCAGACTTTCTCAGG | + |
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Preference number: 6 (lower is better) Translates to: SGTRTENLLEDR*EYLVPTSDFLR Trigger: CCTGAGAAAGTCTGATGTCGGGACCAGATATTCTCACCTGTCCTCTAATAAATTCTCTGTCCTTGTACCACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000073521.12 ENSMUST00000109109.8 ENSMUST00000134593.2 ENSMUST00000147605.8 |
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| CDS CCA 72 bp | CAAAGGAAGGTCCTTTCACAAGACGGTATCAGGTCATaGAGATCAAAATCAATCTTGAAGGCAGGACTTTGT | + |
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Preference number: 6 (lower is better) Translates to: QRKVLSQDGIRS*RSKSILKAGLC Trigger: ACAAAGTCCTGCCTTCAAGATTGATTTTGATCTCCATGACCTGATACCGTCTTGTGAAAGGACCTTCCTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066514.13 ENSMUST00000073521.12 ENSMUST00000109109.8 ENSMUST00000147605.8 |
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| CDS CAA 90 bp | GTCCTTTCACAAGACGGTATCAGGTCATGGAGATCAAAATCAATCTaGAAGGCAGGACTTTGTTCCAAAATAATTAAGGCCACCAACACA | + |
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Preference number: 6 (lower is better) Translates to: VLSQDGIRSWRSKSI*KAGLCSKIIKATNT Trigger: TGTGTTGGTGGCCTTAATTATTTTGGAACAAAGTCCTGCCTTCAAGATTGATTTTGATCTCCATGACCTGATACCGTCTTGTGAAAGGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066514.13 ENSMUST00000073521.12 ENSMUST00000109109.8 ENSMUST00000147605.8 |
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| CDS CAA 72 bp | CAAGACGGTATCAGGTCATGGAGATCAAAATCAATCTaGAAGGCAGGACTTTGTTCCAAAATAATTAAGGCC | + |
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Preference number: 6 (lower is better) Translates to: QDGIRSWRSKSI*KAGLCSKIIKA Trigger: GGCCTTAATTATTTTGGAACAAAGTCCTGCCTTCAAGATTGATTTTGATCTCCATGACCTGATACCGTCTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066514.13 ENSMUST00000073521.12 ENSMUST00000109109.8 ENSMUST00000147605.8 |
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