Pregenerated sensors for NUDT6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050174Ensembl transcript IDs: ENSMUST00000052645.13, ENSMUST00000099130.9, ENSMUST00000108117.3, ENSMUST00000108118.9, ENSMUST00000138949.2, ENSMUST00000141438.2, ENSMUST00000146324.8, ENSMUST00000149449.8, ENSMUST00000198158.5
Found 114 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGGTACATGTCTGACATCCCGAAGGCCCCAGGGCTCCTGTGTTGCTaGCGGATGCTCAACAGGGACCTGAATTCTGACTTGACACCAGTC | + |
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Preference number: 1 (lower is better) Translates to: RYMSDIPKAPGLLCC*RMLNRDLNSDLTPV Trigger: GACTGGTGTCAAGTCAGAATTCAGGTCCCTGTTGAGCATCCGGCAGCAACACAGGAGCCCTGGGGCCTTCGGGATGTCAGACATGTACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108117.3 |
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| 3UTR GCA 90 bp | ACCAGGTACATGTCTGACATCCCGAAGGCCCCAGGGCTCCTGTGTTaGTGCCGGATGCTCAACAGGGACCTGAATTCTGACTTGACACCA | + |
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Preference number: 1 (lower is better) Translates to: TRYMSDIPKAPGLLC*CRMLNRDLNSDLTP Trigger: TGGTGTCAAGTCAGAATTCAGGTCCCTGTTGAGCATCCGGCAGCAACACAGGAGCCCTGGGGCCTTCGGGATGTCAGACATGTACCTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108117.3 |
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| 3UTR CCA 90 bp | GCCAGGTTTTCTAGATCAATCCATTCACACTTCAAGCATTCCTGCTaGCAGAAGTTGATAGTGAAGGAACGAGGCTGCAGGCGGCAGACC | + |
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Preference number: 1 (lower is better) Translates to: ARFSRSIHSHFKHSC*QKLIVKERGCRRQT Trigger: GGTCTGCCGCCTGCAGCCTCGTTCCTTCACTATCAACTTCTGCCAGCAGGAATGCTTGAAGTGTGAATGGATTGATCTAGAAAACCTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108117.3 |
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| 3UTR GCA 90 bp | GAAAACTGGCGTCAGGTTGAAATCTGGTATTCAGTCTGCTCCCGTTaGGGCTTTGTAACTCTCCGGCAGCTCCCTGTGATAGAGTTTGTA | + |
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Preference number: 1 (lower is better) Translates to: ENWRQVEIWYSVCSR*GFVTLRQLPVIEFV Trigger: TACAAACTCTATCACAGGGAGCTGCCGGAGAGTTACAAAGCCGCAACGGGAGCAGACTGAATACCAGATTTCAACCTGACGCCAGTTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108117.3 |
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| 3UTR CAA 90 bp | AGGCCTGTGTACACTGCAGGGAGCTCCTCCATGCTGAGGTCAATTTaGTCAAACCCTTCCCTGAGTCCATACAGCAGTAGCCTAGCCACC | + |
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Preference number: 2 (lower is better) Translates to: RPVYTAGSSSMLRSI*SNPSLSPYSSSLAT Trigger: GGTGGCTAGGCTACTGCTGTATGGACTCAGGGAAGGGTTTGACAAAATTGACCTCAGCATGGAGGAGCTCCCTGCAGTGTACACAGGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108117.3 |
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| 3UTR-3UTR TCA 90 bp | TTTGTAACTCTCCGGCAGCTCCCTGTGATAGAGTTTGTAGAACAGGCCTGTGTATGTCAAACCCTTCCCTaGGTCCATACAGCAGTAGCC | + |
|
Preference number: 2 (lower is better) Translates to: FVTLRQLPVIEFVEQACVCQTLP*VHTAVA Trigger: GGCTACTGCTGTATGGACTCAGGGAAGGGTTTGACA...TACACAGGCCTGTTCTACAAACTCTATCACAGGGAGCTGCCGGAGAGTTACAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108117.3 |
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| 3UTR-3UTR GCA 90 bp | TATTTAGACTTCCCCATTTTATATAGCTTTGGTTGTGACCCAGTGAGGATTAGACAGGCCTGTGTACACTaGAGGGAGCTCCTCCATGCT | + |
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Preference number: 2 (lower is better) Translates to: YLDFPILYSFGCDPVRIRQACVH*RELLHA Trigger: AGCATGGAGGAGCTCCCTGCAGTGTACACAGGCCTG...TCTAATCCTCACTGGGTCACAACCAAAGCTATATAAAATGGGGAAGTCTAAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108117.3 |
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| 3UTR-3UTR TCA 90 bp | CATGGACATAACATATGTGAGAAAACTGGCGTCAGGTTGAAATCTGGTATTCAGGGAGCTCCTCCATGCTaGGGTCAATTTTGTCAAACC | + |
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Preference number: 2 (lower is better) Translates to: HGHNICEKTGVRLKSGIQGAPPC*GQFCQT Trigger: GGTTTGACAAAATTGACCTCAGCATGGAGGAGCTCC...CTGAATACCAGATTTCAACCTGACGCCAGTTTTCTCACATATGTTATGTCCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108117.3 |
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| 3UTR TCA 72 bp | GGAACGAGGCTGCAGGCGGCAGACCAGGTACATGTCTaGCATCCCGAAGGCCCCAGGGCTCCTGTGTTGCTG | + |
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Preference number: 3 (lower is better) Translates to: GTRLQAADQVHV*HPEGPRAPVLL Trigger: CAGCAACACAGGAGCCCTGGGGCCTTCGGGATGTCAGACATGTACCTGGTCTGCCGCCTGCAGCCTCGTTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108117.3 |
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| 3UTR GCA 72 bp | TCTGACATCCCGAAGGCCCCAGGGCTCCTGTGTTGCTaGCGGATGCTCAACAGGGACCTGAATTCTGACTTG | + |
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Preference number: 3 (lower is better) Translates to: SDIPKAPGLLCC*RMLNRDLNSDL Trigger: CAAGTCAGAATTCAGGTCCCTGTTGAGCATCCGGCAGCAACACAGGAGCCCTGGGGCCTTCGGGATGTCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108117.3 |
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| 3UTR GCA 72 bp | ATGTCTGACATCCCGAAGGCCCCAGGGCTCCTGTGTTaGTGCCGGATGCTCAACAGGGACCTGAATTCTGAC | + |
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Preference number: 3 (lower is better) Translates to: MSDIPKAPGLLC*CRMLNRDLNSD Trigger: GTCAGAATTCAGGTCCCTGTTGAGCATCCGGCAGCAACACAGGAGCCCTGGGGCCTTCGGGATGTCAGACAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108117.3 |
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| 3UTR CCA 72 bp | TCTAGATCAATCCATTCACACTTCAAGCATTCCTGCTaGCAGAAGTTGATAGTGAAGGAACGAGGCTGCAGG | + |
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Preference number: 3 (lower is better) Translates to: SRSIHSHFKHSC*QKLIVKERGCR Trigger: CCTGCAGCCTCGTTCCTTCACTATCAACTTCTGCCAGCAGGAATGCTTGAAGTGTGAATGGATTGATCTAGA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108117.3 |
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| 3UTR TCA 72 bp | ATGGACATAACATATGTGAGAAAACTGGCGTCAGGTTaGAATCTGGTATTCAGTCTGCTCCCGTTGCGGCTT | + |
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Preference number: 3 (lower is better) Translates to: MDITYVRKLASG*NLVFSLLPLRL Trigger: AAGCCGCAACGGGAGCAGACTGAATACCAGATTTCAACCTGACGCCAGTTTTCTCACATATGTTATGTCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108117.3 |
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| 3UTR GCA 72 bp | TTTTCTAGATCAATCCATTCACACTTCAAGCATTCCTaGTGGCAGAAGTTGATAGTGAAGGAACGAGGCTGC | + |
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Preference number: 3 (lower is better) Translates to: FSRSIHSHFKHS*WQKLIVKERGC Trigger: GCAGCCTCGTTCCTTCACTATCAACTTCTGCCAGCAGGAATGCTTGAAGTGTGAATGGATTGATCTAGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108117.3 |
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| 3UTR TCA 72 bp | ACTTCCCCATTTTATATAGCTTTGGTTGTGACCCAGTaGGGATTAGAGCTACAATCTTGTTCACATATTTCC | + |
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Preference number: 3 (lower is better) Translates to: TSPFYIALVVTQ*GLELQSCSHIS Trigger: GGAAATATGTGAACAAGATTGTAGCTCTAATCCTCACTGGGTCACAACCAAAGCTATATAAAATGGGGAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000052645.13 ENSMUST00000108117.3 ENSMUST00000108118.9 ENSMUST00000146324.8 |
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| CDS-3UTR CCA 90 bp | GACATCCCGAAGGCCCCAGGGCTCCTGTGTTGCTGCCGGATGCTCAACAGGGACTGCAATATCTTCTCCTaGCTCCGACAGGCCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: DIPKAPGLLCCCRMLNRDCNIFS*LRQASW Trigger: CCAGGAGGCCTGTCGGAGCCAGGAGAAGATATTGCA...GTCCCTGTTGAGCATCCGGCAGCAACACAGGAGCCCTGGGGCCTTCGGGATGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108117.3 |
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| 3UTR CAA 72 bp | ATCCATTCACACTTCAAGCATTCCTGCTGGCAGAAGTaGATAGTGAAGGAACGAGGCTGCAGGCGGCAGACC | + |
|
Preference number: 4 (lower is better) Translates to: IHSHFKHSCWQK*IVKERGCRRQT Trigger: GGTCTGCCGCCTGCAGCCTCGTTCCTTCACTATCAACTTCTGCCAGCAGGAATGCTTGAAGTGTGAATGGAT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108117.3 |
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| CDS-3UTR CCA 90 bp | ATCTTCTCCTGGCTCCGACAGGCCTCCTGGAAACTTCCACATGTTTTTCAATTTAGTGGCTCTGCAGGATaGGGATGTGTAGCCAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: IFSWLRQASWKLPHVFQFSGSAG*GCVARQ Trigger: CTGCCTGGCTACACATCCCCATCCTGCAGAGCCACT...AAATTGAAAAACATGTGGAAGTTTCCAGGAGGCCTGTCGGAGCCAGGAGAAGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198158.5 |
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| CDS-3UTR GCA 90 bp | TTCCACCATGGACATAACATATGTGAGAAAACTGGCGTCAGGTTGAAATCTGGTCAGGCCTGTGTACACTaGAGGGAGCTCCTCCATGCT | + |
|
Preference number: 4 (lower is better) Translates to: FHHGHNICEKTGVRLKSGQACVH*RELLHA Trigger: AGCATGGAGGAGCTCCCTGCAGTGTACACAGGCCTG...ACCAGATTTCAACCTGACGCCAGTTTTCTCACATATGTTATGTCCATGGTGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000052645.13 ENSMUST00000099130.9 ENSMUST00000108118.9 ENSMUST00000141438.2 ENSMUST00000146324.8 |
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| CDS-3UTR CCA 90 bp | GACTTCCCCATTTTATATAGCTTTGGTTGTGACCCAGTGAGGATTAGAGCTACAAGTGGCTCTGCAGGATaGGGATGTGTAGCCAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: DFPILYSFGCDPVRIRATSGSAG*GCVARQ Trigger: CTGCCTGGCTACACATCCCCATCCTGCAGAGCCACT...TGTAGCTCTAATCCTCACTGGGTCACAACCAAAGCTATATAAAATGGGGAAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052645.13 |
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| CDS-3UTR TCA 90 bp | GGTTGTGACCCAGTGAGGATTAGAGCTACAATCTTGTTCACATATTTCCTTTATTCTGAGCGCCACTGCTaGATGGCAGCCTGCAAGAGC | + |
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Preference number: 4 (lower is better) Translates to: GCDPVRIRATILFTYFLYSERHC*MAACKS Trigger: GCTCTTGCAGGCTGCCATTCAGCAGTGGCGCTCAGA...ATAAAGGAAATATGTGAACAAGATTGTAGCTCTAATCCTCACTGGGTCACAACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052645.13 |
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| CDS-3UTR GCA 90 bp | TTAGACTTCCCCATTTTATATAGCTTTGGTTGTGACCCAGTGAGGATTAGAGCTCAGGCCTGTGTACACTaGAGGGAGCTCCTCCATGCT | + |
|
Preference number: 4 (lower is better) Translates to: LDFPILYSFGCDPVRIRAQACVH*RELLHA Trigger: AGCATGGAGGAGCTCCCTGCAGTGTACACAGGCCTG...AGCTCTAATCCTCACTGGGTCACAACCAAAGCTATATAAAATGGGGAAGTCTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052645.13 ENSMUST00000108118.9 ENSMUST00000146324.8 |
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| CDS-3UTR TCA 90 bp | TGTACATTTATGAATTTCCACCATGGACATAACATATGTGAGAAAACTGGCGTCTCTGAGCGCCACTGCTaGATGGCAGCCTGCAAGAGC | + |
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Preference number: 4 (lower is better) Translates to: CTFMNFHHGHNICEKTGVSERHC*MAACKS Trigger: GCTCTTGCAGGCTGCCATTCAGCAGTGGCGCTCAGA...GACGCCAGTTTTCTCACATATGTTATGTCCATGGTGGAAATTCATAAATGTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052645.13 ENSMUST00000099130.9 |
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| CDS-3UTR TCA 90 bp | TTCCACCATGGACATAACATATGTGAGAAAACTGGCGTCAGGTTGAAATCTGGTTGTCAAACCCTTCCCTaGGTCCATACAGCAGTAGCC | + |
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Preference number: 4 (lower is better) Translates to: FHHGHNICEKTGVRLKSGCQTLP*VHTAVA Trigger: GGCTACTGCTGTATGGACTCAGGGAAGGGTTTGACA...ACCAGATTTCAACCTGACGCCAGTTTTCTCACATATGTTATGTCCATGGTGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000052645.13 ENSMUST00000099130.9 ENSMUST00000108118.9 ENSMUST00000141438.2 ENSMUST00000146324.8 |
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| CDS-3UTR GCA 90 bp | ATGAATTTCCACCATGGACATAACATATGTGAGAAAACTGGCGTCAGGTTGAAACAGGCCTGTGTACACTaGAGGGAGCTCCTCCATGCT | + |
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Preference number: 4 (lower is better) Translates to: MNFHHGHNICEKTGVRLKQACVH*RELLHA Trigger: AGCATGGAGGAGCTCCCTGCAGTGTACACAGGCCTG...TTTCAACCTGACGCCAGTTTTCTCACATATGTTATGTCCATGGTGGAAATTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000052645.13 ENSMUST00000099130.9 ENSMUST00000108118.9 ENSMUST00000141438.2 ENSMUST00000146324.8 |
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| CDS-3UTR GCA 90 bp | AATTTCCACCATGGACATAACATATGTGAGAAAACTGGCGTCAGGTTGAAATCTCAGGCCTGTGTACACTaGAGGGAGCTCCTCCATGCT | + |
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Preference number: 4 (lower is better) Translates to: NFHHGHNICEKTGVRLKSQACVH*RELLHA Trigger: AGCATGGAGGAGCTCCCTGCAGTGTACACAGGCCTG...AGATTTCAACCTGACGCCAGTTTTCTCACATATGTTATGTCCATGGTGGAAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000052645.13 ENSMUST00000099130.9 ENSMUST00000108118.9 ENSMUST00000141438.2 ENSMUST00000146324.8 |
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| CDS-3UTR GCA 90 bp | CTCCTGGCTCCGACAGGCCTCCTGGAAACTTCCACATGTTTTTCAATTTATTTCAGCAGTAGCAACAGCTaGAACTCCAACTTGGTGTGT | + |
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Preference number: 4 (lower is better) Translates to: LLAPTGLLETSTCFSIYFSSSNS*NSNLVC Trigger: ACACACCAAGTTGGAGTTGCAGCTGTTGCTACTGCT...GAAATAAATTGAAAAACATGTGGAAGTTTCCAGGAGGCCTGTCGGAGCCAGGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198158.5 |
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| CDS-3UTR CCA 90 bp | ATGAATTTCCACCATGGACATAACATATGTGAGAAAACTGGCGTCAGGTTGAAAGCAGGGGCAATGAAGTaGCTCTGCAGGATGGGGATG | + |
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Preference number: 4 (lower is better) Translates to: MNFHHGHNICEKTGVRLKAGAMK*LCRMGM Trigger: CATCCCCATCCTGCAGAGCCACTTCATTGCCCCTGC...TTTCAACCTGACGCCAGTTTTCTCACATATGTTATGTCCATGGTGGAAATTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000052645.13 ENSMUST00000099130.9 |
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| 3UTR CAA 72 bp | CATGGACATAACATATGTGAGAAAACTGGCGTCAGGTaGAAATCTGGTATTCAGTCTGCTCCCGTTGCGGCT | + |
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Preference number: 4 (lower is better) Translates to: HGHNICEKTGVR*KSGIQSAPVAA Trigger: AGCCGCAACGGGAGCAGACTGAATACCAGATTTCAACCTGACGCCAGTTTTCTCACATATGTTATGTCCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108117.3 |
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| CDS-3UTR TCA 90 bp | CAATTTATTTCGATCTTGTACAACCAGTACTTTCCTGGTGCTAACATCAAATACTCTGAGCGCCACTGCTaGATGGCAGCCTGCAAGAGC | + |
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Preference number: 4 (lower is better) Translates to: QFISILYNQYFPGANIKYSERHC*MAACKS Trigger: GCTCTTGCAGGCTGCCATTCAGCAGTGGCGCTCAGA...GTATTTGATGTTAGCACCAGGAAAGTACTGGTTGTACAAGATCGAAATAAATTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198158.5 |
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| CDS-3UTR TCA 90 bp | TTCCACCATGGACATAACATATGTGAGAAAACTGGCGTCAGGTTGAAATCTGGTCAGGGACCTGAATTCTaGCTTGACACCAGTCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: FHHGHNICEKTGVRLKSGQGPEF*LDTSLF Trigger: GAAGAGACTGGTGTCAAGTCAGAATTCAGGTCCCTG...ACCAGATTTCAACCTGACGCCAGTTTTCTCACATATGTTATGTCCATGGTGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052645.13 ENSMUST00000099130.9 ENSMUST00000108118.9 ENSMUST00000146324.8 |
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| CDS-3UTR TCA 90 bp | TTAGACTTCCCCATTTTATATAGCTTTGGTTGTGACCCAGTGAGGATTAGAGCTTGTCAAACCCTTCCCTaGGTCCATACAGCAGTAGCC | + |
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Preference number: 4 (lower is better) Translates to: LDFPILYSFGCDPVRIRACQTLP*VHTAVA Trigger: GGCTACTGCTGTATGGACTCAGGGAAGGGTTTGACA...AGCTCTAATCCTCACTGGGTCACAACCAAAGCTATATAAAATGGGGAAGTCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052645.13 ENSMUST00000108118.9 ENSMUST00000146324.8 |
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| CDS-3UTR CCA 90 bp | TGTACATTTATGAATTTCCACCATGGACATAACATATGTGAGAAAACTGGCGTCAGTGGCTCTGCAGGATaGGGATGTGTAGCCAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: CTFMNFHHGHNICEKTGVSGSAG*GCVARQ Trigger: CTGCCTGGCTACACATCCCCATCCTGCAGAGCCACT...GACGCCAGTTTTCTCACATATGTTATGTCCATGGTGGAAATTCATAAATGTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052645.13 ENSMUST00000099130.9 |
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| CDS-3UTR CCA 90 bp | TTTATTTCGATCTTGTACAACCAGTACTTTCCTGGTGCTAACATCAAATACAGCGCAGGGGCAATGAAGTaGCTCTGCAGGATGGGGATG | + |
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Preference number: 4 (lower is better) Translates to: FISILYNQYFPGANIKYSAGAMK*LCRMGM Trigger: CATCCCCATCCTGCAGAGCCACTTCATTGCCCCTGC...GCTGTATTTGATGTTAGCACCAGGAAAGTACTGGTTGTACAAGATCGAAATAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198158.5 |
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| CDS-3UTR CCA 90 bp | GGTTGTGACCCAGTGAGGATTAGAGCTACAATCTTGTTCACATATTTCCTTTATTGCAATATCTTCTCCTaGCTCCGACAGGCCTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: GCDPVRIRATILFTYFLYCNIFS*LRQASW Trigger: CCAGGAGGCCTGTCGGAGCCAGGAGAAGATATTGCA...ATAAAGGAAATATGTGAACAAGATTGTAGCTCTAATCCTCACTGGGTCACAACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052645.13 ENSMUST00000108117.3 ENSMUST00000108118.9 ENSMUST00000146324.8 |
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| CDS-3UTR CCA 90 bp | AATTTCCACCATGGACATAACATATGTGAGAAAACTGGCGTCAGGTTGAAATCTTGCAATATCTTCTCCTaGCTCCGACAGGCCTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: NFHHGHNICEKTGVRLKSCNIFS*LRQASW Trigger: CCAGGAGGCCTGTCGGAGCCAGGAGAAGATATTGCA...AGATTTCAACCTGACGCCAGTTTTCTCACATATGTTATGTCCATGGTGGAAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052645.13 ENSMUST00000108117.3 ENSMUST00000108118.9 ENSMUST00000146324.8 |
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| CDS-3UTR CCA 90 bp | ACATTTATGAATTTCCACCATGGACATAACATATGTGAGAAAACTGGCGTCAGGGTCAATATCTTCTCCTaGCTCCGACAGGCCTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: TFMNFHHGHNICEKTGVRVNIFS*LRQASW Trigger: CCAGGAGGCCTGTCGGAGCCAGGAGAAGATATTGAC...CCTGACGCCAGTTTTCTCACATATGTTATGTCCATGGTGGAAATTCATAAATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099130.9 |
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| CDS-3UTR TCA 90 bp | ACATTTATGAATTTCCACCATGGACATAACATATGTGAGAAAACTGGCGTCAGGCCACAGAGTCAGTGTTaGGGAATGGGGTTTTGCGTG | + |
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Preference number: 4 (lower is better) Translates to: TFMNFHHGHNICEKTGVRPQSQC*GMGFCV Trigger: CACGCAAAACCCCATTCCTCAACACTGACTCTGTGG...CCTGACGCCAGTTTTCTCACATATGTTATGTCCATGGTGGAAATTCATAAATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000052645.13 ENSMUST00000099130.9 |
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| CDS-3UTR TCA 90 bp | AATTTCCACCATGGACATAACATATGTGAGAAAACTGGCGTCAGGTTGAAATCTCCACAGAGTCAGTGTTaGGGAATGGGGTTTTGCGTG | + |
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Preference number: 4 (lower is better) Translates to: NFHHGHNICEKTGVRLKSPQSQC*GMGFCV Trigger: CACGCAAAACCCCATTCCTCAACACTGACTCTGTGG...AGATTTCAACCTGACGCCAGTTTTCTCACATATGTTATGTCCATGGTGGAAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000052645.13 ENSMUST00000099130.9 |
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| CDS-3UTR TCA 90 bp | GGTTGTGACCCAGTGAGGATTAGAGCTACAATCTTGTTCACATATTTCCTTTATTGTCAAACCCTTCCCTaGGTCCATACAGCAGTAGCC | + |
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Preference number: 4 (lower is better) Translates to: GCDPVRIRATILFTYFLYCQTLP*VHTAVA Trigger: GGCTACTGCTGTATGGACTCAGGGAAGGGTTTGACA...ATAAAGGAAATATGTGAACAAGATTGTAGCTCTAATCCTCACTGGGTCACAACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052645.13 ENSMUST00000108118.9 ENSMUST00000146324.8 |
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| CDS-3UTR TCA 90 bp | AATTTCCACCATGGACATAACATATGTGAGAAAACTGGCGTCAGGTTGAAATCTTGTCAAACCCTTCCCTaGGTCCATACAGCAGTAGCC | + |
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Preference number: 4 (lower is better) Translates to: NFHHGHNICEKTGVRLKSCQTLP*VHTAVA Trigger: GGCTACTGCTGTATGGACTCAGGGAAGGGTTTGACA...AGATTTCAACCTGACGCCAGTTTTCTCACATATGTTATGTCCATGGTGGAAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000052645.13 ENSMUST00000099130.9 ENSMUST00000108118.9 ENSMUST00000141438.2 ENSMUST00000146324.8 |
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| CDS-3UTR CCA 90 bp | ATGAATTTCCACCATGGACATAACATATGTGAGAAAACTGGCGTCAGGTTGAAACCTGCAACTCCAACTTaGTGTGTAGCATATCCCGGG | + |
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Preference number: 4 (lower is better) Translates to: MNFHHGHNICEKTGVRLKPATPT*CVAYPG Trigger: CCCGGGATATGCTACACACCAAGTTGGAGTTGCAGG...TTTCAACCTGACGCCAGTTTTCTCACATATGTTATGTCCATGGTGGAAATTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052645.13 ENSMUST00000099130.9 |
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| CDS-3UTR TCA 90 bp | AATTTCCACCATGGACATAACATATGTGAGAAAACTGGCGTCAGGTTGAAATCTCAGGGACCTGAATTCTaGCTTGACACCAGTCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: NFHHGHNICEKTGVRLKSQGPEF*LDTSLF Trigger: GAAGAGACTGGTGTCAAGTCAGAATTCAGGTCCCTG...AGATTTCAACCTGACGCCAGTTTTCTCACATATGTTATGTCCATGGTGGAAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052645.13 ENSMUST00000099130.9 ENSMUST00000108118.9 ENSMUST00000146324.8 |
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| CDS-3UTR TCA 90 bp | ATGAATTTCCACCATGGACATAACATATGTGAGAAAACTGGCGTCAGGTTGAAACAGGGACCTGAATTCTaGCTTGACACCAGTCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: MNFHHGHNICEKTGVRLKQGPEF*LDTSLF Trigger: GAAGAGACTGGTGTCAAGTCAGAATTCAGGTCCCTG...TTTCAACCTGACGCCAGTTTTCTCACATATGTTATGTCCATGGTGGAAATTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052645.13 ENSMUST00000099130.9 ENSMUST00000108118.9 ENSMUST00000146324.8 |
||
| CDS-3UTR TCA 90 bp | TGTACATTTATGAATTTCCACCATGGACATAACATATGTGAGAAAACTGGCGTCTGTCAAACCCTTCCCTaGGTCCATACAGCAGTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: CTFMNFHHGHNICEKTGVCQTLP*VHTAVA Trigger: GGCTACTGCTGTATGGACTCAGGGAAGGGTTTGACA...GACGCCAGTTTTCTCACATATGTTATGTCCATGGTGGAAATTCATAAATGTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000052645.13 ENSMUST00000099130.9 ENSMUST00000108118.9 ENSMUST00000141438.2 ENSMUST00000146324.8 |
||
| CDS-3UTR TCA 90 bp | ACATTTATGAATTTCCACCATGGACATAACATATGTGAGAAAACTGGCGTCAGGGGAGCTCCTCCATGCTaGGGTCAATTTTGTCAAACC | + |
|
Preference number: 4 (lower is better) Translates to: TFMNFHHGHNICEKTGVRGAPPC*GQFCQT Trigger: GGTTTGACAAAATTGACCTCAGCATGGAGGAGCTCC...CCTGACGCCAGTTTTCTCACATATGTTATGTCCATGGTGGAAATTCATAAATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000052645.13 ENSMUST00000099130.9 ENSMUST00000108118.9 ENSMUST00000141438.2 ENSMUST00000146324.8 |
||
| CDS-3UTR TCA 90 bp | ATGAATTTCCACCATGGACATAACATATGTGAGAAAACTGGCGTCAGGTTGAAAGGAGCTCCTCCATGCTaGGGTCAATTTTGTCAAACC | + |
|
Preference number: 4 (lower is better) Translates to: MNFHHGHNICEKTGVRLKGAPPC*GQFCQT Trigger: GGTTTGACAAAATTGACCTCAGCATGGAGGAGCTCC...TTTCAACCTGACGCCAGTTTTCTCACATATGTTATGTCCATGGTGGAAATTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000052645.13 ENSMUST00000099130.9 ENSMUST00000108118.9 ENSMUST00000141438.2 ENSMUST00000146324.8 |
||
| CDS-3UTR CCA 90 bp | TATTTAGACTTCCCCATTTTATATAGCTTTGGTTGTGACCCAGTGAGGATTAGACCTGCAACTCCAACTTaGTGTGTAGCATATCCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: YLDFPILYSFGCDPVRIRPATPT*CVAYPG Trigger: CCCGGGATATGCTACACACCAAGTTGGAGTTGCAGG...TCTAATCCTCACTGGGTCACAACCAAAGCTATATAAAATGGGGAAGTCTAAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052645.13 |
||
| CDS-3UTR TCA 90 bp | TGTACATTTATGAATTTCCACCATGGACATAACATATGTGAGAAAACTGGCGTCCAGGGACCTGAATTCTaGCTTGACACCAGTCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CTFMNFHHGHNICEKTGVQGPEF*LDTSLF Trigger: GAAGAGACTGGTGTCAAGTCAGAATTCAGGTCCCTG...GACGCCAGTTTTCTCACATATGTTATGTCCATGGTGGAAATTCATAAATGTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052645.13 ENSMUST00000099130.9 ENSMUST00000108118.9 ENSMUST00000146324.8 |
||
| CDS-3UTR TCA 90 bp | TATTTAGACTTCCCCATTTTATATAGCTTTGGTTGTGACCCAGTGAGGATTAGAGGAGCTCCTCCATGCTaGGGTCAATTTTGTCAAACC | + |
|
Preference number: 4 (lower is better) Translates to: YLDFPILYSFGCDPVRIRGAPPC*GQFCQT Trigger: GGTTTGACAAAATTGACCTCAGCATGGAGGAGCTCC...TCTAATCCTCACTGGGTCACAACCAAAGCTATATAAAATGGGGAAGTCTAAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000052645.13 ENSMUST00000108118.9 ENSMUST00000146324.8 |
||
| CDS-3UTR TCA 90 bp | TGTACATTTATGAATTTCCACCATGGACATAACATATGTGAGAAAACTGGCGTCGGAGCTCCTCCATGCTaGGGTCAATTTTGTCAAACC | + |
|
Preference number: 4 (lower is better) Translates to: CTFMNFHHGHNICEKTGVGAPPC*GQFCQT Trigger: GGTTTGACAAAATTGACCTCAGCATGGAGGAGCTCC...GACGCCAGTTTTCTCACATATGTTATGTCCATGGTGGAAATTCATAAATGTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000052645.13 ENSMUST00000099130.9 ENSMUST00000108118.9 ENSMUST00000141438.2 ENSMUST00000146324.8 |
||
| CDS-3UTR GCA 90 bp | TTAGACTTCCCCATTTTATATAGCTTTGGTTGTGACCCAGTGAGGATTAGAGCTCACTTCAAGCATTCCTaGTGGCAGAAGTTGATAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LDFPILYSFGCDPVRIRAHFKHS*WQKLIV Trigger: CACTATCAACTTCTGCCAGCAGGAATGCTTGAAGTG...AGCTCTAATCCTCACTGGGTCACAACCAAAGCTATATAAAATGGGGAAGTCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052645.13 ENSMUST00000108118.9 ENSMUST00000146324.8 |
||
| CDS-3UTR CCA 90 bp | TTCCACCATGGACATAACATATGTGAGAAAACTGGCGTCAGGTTGAAATCTGGTTTCAAGCATTCCTGCTaGCAGAAGTTGATAGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: FHHGHNICEKTGVRLKSGFKHSC*QKLIVK Trigger: CTTCACTATCAACTTCTGCCAGCAGGAATGCTTGAA...ACCAGATTTCAACCTGACGCCAGTTTTCTCACATATGTTATGTCCATGGTGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000052645.13 ENSMUST00000099130.9 ENSMUST00000108118.9 ENSMUST00000141438.2 ENSMUST00000146324.8 |
||
| CDS-3UTR GCA 90 bp | ATGAATTTCCACCATGGACATAACATATGTGAGAAAACTGGCGTCAGGTTGAAACACTTCAAGCATTCCTaGTGGCAGAAGTTGATAGTG | + |
|
Preference number: 4 (lower is better) Translates to: MNFHHGHNICEKTGVRLKHFKHS*WQKLIV Trigger: CACTATCAACTTCTGCCAGCAGGAATGCTTGAAGTG...TTTCAACCTGACGCCAGTTTTCTCACATATGTTATGTCCATGGTGGAAATTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000052645.13 ENSMUST00000099130.9 ENSMUST00000108118.9 ENSMUST00000141438.2 ENSMUST00000146324.8 |
||
| CDS-3UTR GCA 90 bp | AATTTCCACCATGGACATAACATATGTGAGAAAACTGGCGTCAGGTTGAAATCTATCAAATACAGCACCTaGAACTCCAACTTGGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: NFHHGHNICEKTGVRLKSIKYST*NSNLVC Trigger: ACACACCAAGTTGGAGTTGCAGGTGCTGTATTTGAT...AGATTTCAACCTGACGCCAGTTTTCTCACATATGTTATGTCCATGGTGGAAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052645.13 ENSMUST00000099130.9 |
||
| CDS-3UTR GCA 90 bp | ATGAATTTCCACCATGGACATAACATATGTGAGAAAACTGGCGTCAGGTTGAAAATCAAATACAGCACCTaGAACTCCAACTTGGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: MNFHHGHNICEKTGVRLKIKYST*NSNLVC Trigger: ACACACCAAGTTGGAGTTGCAGGTGCTGTATTTGAT...TTTCAACCTGACGCCAGTTTTCTCACATATGTTATGTCCATGGTGGAAATTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052645.13 ENSMUST00000099130.9 |
||
| CDS-3UTR GCA 90 bp | TATTTAGACTTCCCCATTTTATATAGCTTTGGTTGTGACCCAGTGAGGATTAGACACTTCAAGCATTCCTaGTGGCAGAAGTTGATAGTG | + |
|
Preference number: 4 (lower is better) Translates to: YLDFPILYSFGCDPVRIRHFKHS*WQKLIV Trigger: CACTATCAACTTCTGCCAGCAGGAATGCTTGAAGTG...TCTAATCCTCACTGGGTCACAACCAAAGCTATATAAAATGGGGAAGTCTAAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052645.13 ENSMUST00000108118.9 ENSMUST00000146324.8 |
||
| CDS-3UTR GCA 90 bp | ACATTTATGAATTTCCACCATGGACATAACATATGTGAGAAAACTGGCGTCAGGAAAAACCTCTCGGACTaGTGTGTCAATATCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TFMNFHHGHNICEKTGVRKNLSD*CVNIFS Trigger: GGAGAAGATATTGACACAGCAGTCCGAGAGGTTTTT...CCTGACGCCAGTTTTCTCACATATGTTATGTCCATGGTGGAAATTCATAAATGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099130.9 |
||
| CDS-3UTR CCA 90 bp | ACATTTATGAATTTCCACCATGGACATAACATATGTGAGAAAACTGGCGTCAGGTTCAAGCATTCCTGCTaGCAGAAGTTGATAGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TFMNFHHGHNICEKTGVRFKHSC*QKLIVK Trigger: CTTCACTATCAACTTCTGCCAGCAGGAATGCTTGAA...CCTGACGCCAGTTTTCTCACATATGTTATGTCCATGGTGGAAATTCATAAATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000052645.13 ENSMUST00000099130.9 ENSMUST00000108118.9 ENSMUST00000141438.2 ENSMUST00000146324.8 |
||
| CDS-3UTR CCA 90 bp | TGTACATTTATGAATTTCCACCATGGACATAACATATGTGAGAAAACTGGCGTCTTCAAGCATTCCTGCTaGCAGAAGTTGATAGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: CTFMNFHHGHNICEKTGVFKHSC*QKLIVK Trigger: CTTCACTATCAACTTCTGCCAGCAGGAATGCTTGAA...GACGCCAGTTTTCTCACATATGTTATGTCCATGGTGGAAATTCATAAATGTACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000052645.13 ENSMUST00000099130.9 ENSMUST00000108118.9 ENSMUST00000141438.2 ENSMUST00000146324.8 |
||
| CDS-3UTR CCA 90 bp | TATTTAGACTTCCCCATTTTATATAGCTTTGGTTGTGACCCAGTGAGGATTAGATTCAAGCATTCCTGCTaGCAGAAGTTGATAGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: YLDFPILYSFGCDPVRIRFKHSC*QKLIVK Trigger: CTTCACTATCAACTTCTGCCAGCAGGAATGCTTGAA...TCTAATCCTCACTGGGTCACAACCAAAGCTATATAAAATGGGGAAGTCTAAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052645.13 ENSMUST00000108118.9 ENSMUST00000146324.8 |
||
| CDS CCA 90 bp | GGGTCTCCAGGCCGCCCGAGGCTGTGCGCCGCCCCGGCCGGAGCCTaGCTCCGCCCGCGTAAAGCAATGTGGAGAACCAGTAGCGGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: GSPGRPRLCAAPAGA*LRPRKAMWRTSSGS Trigger: GGACCCGCTACTGGTTCTCCACATTGCTTTACGCGGGCGGAGCCAGGCTCCGGCCGGGGCGGCGCACAGCCTCGGGCGGCCTGGAGACCC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000052645.13 ENSMUST00000099130.9 ENSMUST00000108117.3 ENSMUST00000108118.9 ENSMUST00000138949.2 ENSMUST00000149449.8 ENSMUST00000198158.5 |
||
| CDS TCA 90 bp | GGGATGTGTAGCCAGGCAGCTATCCGTCCTTCTGAGCGCCACTGCTaGATGGCAGCTTGTAGCTCGGCCCCGCAGGAGCCCGGGGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GMCSQAAIRPSERHC*MAACSSAPQEPGVS Trigger: GGAGACCCCGGGCTCCTGCGGGGCCGAGCTACAAGCTGCCATTCAGCAGTGGCGCTCAGAAGGACGGATAGCTGCCTGGCTACACATCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138949.2 |
||
| CDS GCA 90 bp | AAGAGCCTCCGGAAGGCGGCGGCATCCAGCCCGTGCAACGTATGGTaGCGCGACAAGTGCACCGAGACGCCCCCAAATCTGTCCAGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: KSLRKAAASSPCNVW*RDKCTETPPNLSSS Trigger: CGAGCTGGACAGATTTGGGGGCGTCTCGGTGCACTTGTCGCGGCACCATACGTTGCACGGGCTGGATGCCGCCGCCTTCCGGAGGCTCTT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000052645.13 ENSMUST00000099130.9 ENSMUST00000108117.3 ENSMUST00000108118.9 ENSMUST00000149449.8 ENSMUST00000198158.5 |
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| CDS CCA 90 bp | TGCAAGAGCCTCCGGAAGGCGGCGGCATCCAGCCCGTGCAACGTATaGTGCCGCGACAAGTGCACCGAGACGCCCCCAAATCTGTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: CKSLRKAAASSPCNV*CRDKCTETPPNLSS Trigger: GCTGGACAGATTTGGGGGCGTCTCGGTGCACTTGTCGCGGCACCATACGTTGCACGGGCTGGATGCCGCCGCCTTCCGGAGGCTCTTGCA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000052645.13 ENSMUST00000099130.9 ENSMUST00000108117.3 ENSMUST00000108118.9 ENSMUST00000149449.8 ENSMUST00000198158.5 |
||
| CDS CCA 90 bp | TGTGTAGCCAGGCAGCTATCCGTCCTTCTGAGCGCCACTGCTGAATaGCAGCTTGTAGCTCGGCCCCGCAGGAGCCCGGGGTCTCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: CVARQLSVLLSATAE*QLVARPRRSPGSPG Trigger: GCCTGGAGACCCCGGGCTCCTGCGGGGCCGAGCTACAAGCTGCCATTCAGCAGTGGCGCTCAGAAGGACGGATAGCTGCCTGGCTACACA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138949.2 |
||
| CDS GCA 90 bp | AAGGCGGCGGCATCCAGCCCGTGCAACGTATGGTGCCGCGACAAGTaGACCGAGACGCCCCCAAATCTGTCCAGCTCGCCTTGTAGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: KAAASSPCNVWCRDK*TETPPNLSSSPCSS Trigger: CGAGCTACAAGGCGAGCTGGACAGATTTGGGGGCGTCTCGGTGCACTTGTCGCGGCACCATACGTTGCACGGGCTGGATGCCGCCGCCTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000052645.13 ENSMUST00000099130.9 ENSMUST00000108117.3 ENSMUST00000108118.9 ENSMUST00000149449.8 ENSMUST00000198158.5 |
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| CDS GCA 90 bp | CTGGCTCCGACAGGCCTCCTGGAAACTTCCACATGTTTTTCAACCTaGAAGAGCCTCCGGAAGGCGGCGGCATCCAGCCCGTGCAACGTA | + |
|
Preference number: 5 (lower is better) Translates to: LAPTGLLETSTCFST*KSLRKAAASSPCNV Trigger: TACGTTGCACGGGCTGGATGCCGCCGCCTTCCGGAGGCTCTTGCAGGTTGAAAAACATGTGGAAGTTTCCAGGAGGCCTGTCGGAGCCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108117.3 |
||
| CDS GCA 90 bp | TGTACAACCAGTACTTTCCTGGTGCTAACATCAAATACAGCACCCTaGAAGAGCCTCCGGAAGGCGGCGGCATCCAGCCCGTGCAACGTA | + |
|
Preference number: 5 (lower is better) Translates to: CTTSTFLVLTSNTAP*KSLRKAAASSPCNV Trigger: TACGTTGCACGGGCTGGATGCCGCCGCCTTCCGGAGGCTCTTGCAGGGTGCTGTATTTGATGTTAGCACCAGGAAAGTACTGGTTGTACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108118.9 |
||
| CDS CCA 90 bp | TCTTCAAAAACCTCTCGGACTGCTGTGTCTGCTGCAACTCCAACTTaGTGTGTAGCATATCCCGGGAGTCTGCTGGGTCCTTCTCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SSKTSRTAVSAATPT*CVAYPGSLLGPSPS Trigger: GCTGGGAGAAGGACCCAGCAGACTCCCGGGATATGCTACACACCAAGTTGGAGTTGCAGCAGACACAGCAGTCCGAGAGGTTTTTGAAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149449.8 |
||
| CDS TCA 90 bp | AGGGCTCCTGTGTTGCTGCCGGATGCTCAACAGGGACCTGAATTCTaGCTTGACACCAGTCTCTTCAAAAACCTCTCGGACTGCTGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: RAPVLLPDAQQGPEF*LDTSLFKNLSDCCV Trigger: GACACAGCAGTCCGAGAGGTTTTTGAAGAGACTGGTGTCAAGTCAGAATTCAGGTCCCTGTTGAGCATCCGGCAGCAACACAGGAGCCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000052645.13 ENSMUST00000099130.9 ENSMUST00000108118.9 ENSMUST00000146324.8 ENSMUST00000149449.8 |
||
| CDS GCA 90 bp | CTTGACACCAGTCTCTTCAAAAACCTCTCGGACTGCTGTGTCTGCTaGAACTCCAACTTGGTGTGTAGCATATCCCGGGAGTCTGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: LDTSLFKNLSDCCVC*NSNLVCSISRESAG Trigger: CCCAGCAGACTCCCGGGATATGCTACACACCAAGTTGGAGTTGCAGCAGACACAGCAGTCCGAGAGGTTTTTGAAGAGACTGGTGTCAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149449.8 |
||
| CDS CCA 90 bp | ACTTTCCTGGTGCTAACATCAAATACAGCACCTGCAACTCCAACTTaGTGTGTAGCATATCCCGGGAGTCTGCTGGGTCCTTCTCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: TFLVLTSNTAPATPT*CVAYPGSLLGPSPS Trigger: GCTGGGAGAAGGACCCAGCAGACTCCCGGGATATGCTACACACCAAGTTGGAGTTGCAGGTGCTGTATTTGATGTTAGCACCAGGAAAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052645.13 ENSMUST00000099130.9 ENSMUST00000138949.2 |
||
| CDS GCA 90 bp | TTGTACAACCAGTACTTTCCTGGTGCTAACATCAAATACAGCACCTaGAACTCCAACTTGGTGTGTAGCATATCCCGGGAGTCTGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: LYNQYFPGANIKYST*NSNLVCSISRESAG Trigger: CCCAGCAGACTCCCGGGATATGCTACACACCAAGTTGGAGTTGCAGGTGCTGTATTTGATGTTAGCACCAGGAAAGTACTGGTTGTACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052645.13 ENSMUST00000099130.9 ENSMUST00000138949.2 |
||
| CDS-3UTR CAA 90 bp | ATCTTCTCCTGGCTCCGACAGGCCTCCTGGAAACTTCCACATGTTTTTCAATTTGCCACAGAGTCAGTGTaGAGGAATGGGGTTTTGCGT | + |
|
Preference number: 5 (lower is better) Translates to: IFSWLRQASWKLPHVFQFATESV*RNGVLR Trigger: ACGCAAAACCCCATTCCTCAACACTGACTCTGTGGC...AAATTGAAAAACATGTGGAAGTTTCCAGGAGGCCTGTCGGAGCCAGGAGAAGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000198158.5 |
||
| CDS-3UTR CAA 90 bp | ATCTTCTCCTGGCTCCGACAGGCCTCCTGGAAACTTCCACATGTTTTTCAATTTAGCTGCAACTCCAACTaGGTGTGTAGCATATCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: IFSWLRQASWKLPHVFQFSCNSN*VCSISR Trigger: CCGGGATATGCTACACACCAAGTTGGAGTTGCAGCT...AAATTGAAAAACATGTGGAAGTTTCCAGGAGGCCTGTCGGAGCCAGGAGAAGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198158.5 |
||
| CDS-3UTR CAA 90 bp | TTCCACCATGGACATAACATATGTGAGAAAACTGGCGTCAGGTTGAAATCTGGTACCTGCAACTCCAACTaGGTGTGTAGCATATCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: FHHGHNICEKTGVRLKSGTCNSN*VCSISR Trigger: CCGGGATATGCTACACACCAAGTTGGAGTTGCAGGT...ACCAGATTTCAACCTGACGCCAGTTTTCTCACATATGTTATGTCCATGGTGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052645.13 ENSMUST00000099130.9 |
||
| CDS-3UTR CAA 90 bp | TTCCACCATGGACATAACATATGTGAGAAAACTGGCGTCAGGTTGAAATCTGGTTCCTGCTGGCAGAAGTaGATAGTGAAGGAACGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: FHHGHNICEKTGVRLKSGSCWQK*IVKERG Trigger: GCCTCGTTCCTTCACTATCAACTTCTGCCAGCAGGA...ACCAGATTTCAACCTGACGCCAGTTTTCTCACATATGTTATGTCCATGGTGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000052645.13 ENSMUST00000099130.9 ENSMUST00000108118.9 ENSMUST00000141438.2 ENSMUST00000146324.8 |
||
| CDS-3UTR CAA 90 bp | TTAGACTTCCCCATTTTATATAGCTTTGGTTGTGACCCAGTGAGGATTAGAGCTTCCTGCTGGCAGAAGTaGATAGTGAAGGAACGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: LDFPILYSFGCDPVRIRASCWQK*IVKERG Trigger: GCCTCGTTCCTTCACTATCAACTTCTGCCAGCAGGA...AGCTCTAATCCTCACTGGGTCACAACCAAAGCTATATAAAATGGGGAAGTCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052645.13 ENSMUST00000108118.9 ENSMUST00000146324.8 |
||
| CDS CCA 90 bp | GACTGCTGTGTCTGCAATATCTTCTCCTGGCTCCGACAGGCCTCCTaGAAACTTCCACATGTTTTTCAATTTATTTCGATCTTGTACAAC | + |
|
Preference number: 5 (lower is better) Translates to: DCCVCNIFSWLRQAS*KLPHVFQFISILYN Trigger: GTTGTACAAGATCGAAATAAATTGAAAAACATGTGGAAGTTTCCAGGAGGCCTGTCGGAGCCAGGAGAAGATATTGCAGACACAGCAGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052645.13 ENSMUST00000108118.9 |
||
| CDS CCA 90 bp | TCGGACTGCTGTGTCAATATCTTCTCCTGGCTCCGACAGGCCTCCTaGAAACTTCCACATGTTTTTCAATTTATTTCGATCTTGTACAAC | + |
|
Preference number: 5 (lower is better) Translates to: SDCCVNIFSWLRQAS*KLPHVFQFISILYN Trigger: GTTGTACAAGATCGAAATAAATTGAAAAACATGTGGAAGTTTCCAGGAGGCCTGTCGGAGCCAGGAGAAGATATTGACACAGCAGTCCGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099130.9 |
||
| CDS-3UTR CAA 90 bp | ATGAATTTCCACCATGGACATAACATATGTGAGAAAACTGGCGTCAGGTTGAAAGCCACAGAGTCAGTGTaGAGGAATGGGGTTTTGCGT | + |
|
Preference number: 5 (lower is better) Translates to: MNFHHGHNICEKTGVRLKATESV*RNGVLR Trigger: ACGCAAAACCCCATTCCTCAACACTGACTCTGTGGC...TTTCAACCTGACGCCAGTTTTCTCACATATGTTATGTCCATGGTGGAAATTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000052645.13 ENSMUST00000099130.9 |
||
| CDS-3UTR CAA 90 bp | ACATTTATGAATTTCCACCATGGACATAACATATGTGAGAAAACTGGCGTCAGGTCCTGCTGGCAGAAGTaGATAGTGAAGGAACGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: TFMNFHHGHNICEKTGVRSCWQK*IVKERG Trigger: GCCTCGTTCCTTCACTATCAACTTCTGCCAGCAGGA...CCTGACGCCAGTTTTCTCACATATGTTATGTCCATGGTGGAAATTCATAAATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000052645.13 ENSMUST00000099130.9 ENSMUST00000108118.9 ENSMUST00000141438.2 ENSMUST00000146324.8 |
||
| CDS-3UTR CAA 90 bp | TGTACATTTATGAATTTCCACCATGGACATAACATATGTGAGAAAACTGGCGTCGCCACAGAGTCAGTGTaGAGGAATGGGGTTTTGCGT | + |
|
Preference number: 5 (lower is better) Translates to: CTFMNFHHGHNICEKTGVATESV*RNGVLR Trigger: ACGCAAAACCCCATTCCTCAACACTGACTCTGTGGC...GACGCCAGTTTTCTCACATATGTTATGTCCATGGTGGAAATTCATAAATGTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000052645.13 ENSMUST00000099130.9 |
||
| CDS-3UTR CAA 90 bp | TGTACATTTATGAATTTCCACCATGGACATAACATATGTGAGAAAACTGGCGTCACCTGCAACTCCAACTaGGTGTGTAGCATATCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: CTFMNFHHGHNICEKTGVTCNSN*VCSISR Trigger: CCGGGATATGCTACACACCAAGTTGGAGTTGCAGGT...GACGCCAGTTTTCTCACATATGTTATGTCCATGGTGGAAATTCATAAATGTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052645.13 ENSMUST00000099130.9 |
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| CDS-3UTR CAA 90 bp | TTCCACCATGGACATAACATATGTGAGAAAACTGGCGTCAGGTTGAAATCTGGTATGCTGAGGTCAATTTaGTCAAACCCTTCCCTGAGT | + |
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Preference number: 5 (lower is better) Translates to: FHHGHNICEKTGVRLKSGMLRSI*SNPSLS Trigger: ACTCAGGGAAGGGTTTGACAAAATTGACCTCAGCAT...ACCAGATTTCAACCTGACGCCAGTTTTCTCACATATGTTATGTCCATGGTGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000052645.13 ENSMUST00000099130.9 ENSMUST00000108118.9 ENSMUST00000141438.2 ENSMUST00000146324.8 |
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| CDS-3UTR CAA 90 bp | TTCCACCATGGACATAACATATGTGAGAAAACTGGCGTCAGGTTGAAATCTGGTGACCTGAATTCTGACTaGACACCAGTCTCTTCAAAA | + |
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Preference number: 5 (lower is better) Translates to: FHHGHNICEKTGVRLKSGDLNSD*TPVSSK Trigger: TTTTGAAGAGACTGGTGTCAAGTCAGAATTCAGGTC...ACCAGATTTCAACCTGACGCCAGTTTTCTCACATATGTTATGTCCATGGTGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052645.13 ENSMUST00000099130.9 ENSMUST00000108118.9 ENSMUST00000146324.8 |
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| CDS-3UTR CAA 90 bp | GGTTGTGACCCAGTGAGGATTAGAGCTACAATCTTGTTCACATATTTCCTTTATATGCTGAGGTCAATTTaGTCAAACCCTTCCCTGAGT | + |
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Preference number: 5 (lower is better) Translates to: GCDPVRIRATILFTYFLYMLRSI*SNPSLS Trigger: ACTCAGGGAAGGGTTTGACAAAATTGACCTCAGCAT...ATAAAGGAAATATGTGAACAAGATTGTAGCTCTAATCCTCACTGGGTCACAACC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052645.13 ENSMUST00000108118.9 ENSMUST00000146324.8 |
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| CDS-3UTR CAA 90 bp | AATTTCCACCATGGACATAACATATGTGAGAAAACTGGCGTCAGGTTGAAATCTATGCTGAGGTCAATTTaGTCAAACCCTTCCCTGAGT | + |
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Preference number: 5 (lower is better) Translates to: NFHHGHNICEKTGVRLKSMLRSI*SNPSLS Trigger: ACTCAGGGAAGGGTTTGACAAAATTGACCTCAGCAT...AGATTTCAACCTGACGCCAGTTTTCTCACATATGTTATGTCCATGGTGGAAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000052645.13 ENSMUST00000099130.9 ENSMUST00000108118.9 ENSMUST00000141438.2 ENSMUST00000146324.8 |
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| CDS-3UTR CAA 90 bp | ACATTTATGAATTTCCACCATGGACATAACATATGTGAGAAAACTGGCGTCAGGATGCTGAGGTCAATTTaGTCAAACCCTTCCCTGAGT | + |
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Preference number: 5 (lower is better) Translates to: TFMNFHHGHNICEKTGVRMLRSI*SNPSLS Trigger: ACTCAGGGAAGGGTTTGACAAAATTGACCTCAGCAT...CCTGACGCCAGTTTTCTCACATATGTTATGTCCATGGTGGAAATTCATAAATGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000052645.13 ENSMUST00000099130.9 ENSMUST00000108118.9 ENSMUST00000141438.2 ENSMUST00000146324.8 |
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| CDS-3UTR CAA 90 bp | ATGAATTTCCACCATGGACATAACATATGTGAGAAAACTGGCGTCAGGTTGAAAATGCTGAGGTCAATTTaGTCAAACCCTTCCCTGAGT | + |
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Preference number: 5 (lower is better) Translates to: MNFHHGHNICEKTGVRLKMLRSI*SNPSLS Trigger: ACTCAGGGAAGGGTTTGACAAAATTGACCTCAGCAT...TTTCAACCTGACGCCAGTTTTCTCACATATGTTATGTCCATGGTGGAAATTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000052645.13 ENSMUST00000099130.9 ENSMUST00000108118.9 ENSMUST00000141438.2 ENSMUST00000146324.8 |
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| CDS-3UTR CAA 90 bp | ACATTTATGAATTTCCACCATGGACATAACATATGTGAGAAAACTGGCGTCAGGGACCTGAATTCTGACTaGACACCAGTCTCTTCAAAA | + |
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Preference number: 5 (lower is better) Translates to: TFMNFHHGHNICEKTGVRDLNSD*TPVSSK Trigger: TTTTGAAGAGACTGGTGTCAAGTCAGAATTCAGGTC...CCTGACGCCAGTTTTCTCACATATGTTATGTCCATGGTGGAAATTCATAAATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052645.13 ENSMUST00000099130.9 ENSMUST00000108118.9 ENSMUST00000146324.8 |
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| CDS-3UTR CAA 90 bp | ATGAATTTCCACCATGGACATAACATATGTGAGAAAACTGGCGTCAGGTTGAAAGACCTGAATTCTGACTaGACACCAGTCTCTTCAAAA | + |
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Preference number: 5 (lower is better) Translates to: MNFHHGHNICEKTGVRLKDLNSD*TPVSSK Trigger: TTTTGAAGAGACTGGTGTCAAGTCAGAATTCAGGTC...TTTCAACCTGACGCCAGTTTTCTCACATATGTTATGTCCATGGTGGAAATTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052645.13 ENSMUST00000099130.9 ENSMUST00000108118.9 ENSMUST00000146324.8 |
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| CDS CCA 72 bp | GGCCGCCCGAGGCTGTGCGCCGCCCCGGCCGGAGCCTaGCTCCGCCCGCGTAAAGCAATGTGGAGAACCAGT | + |
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Preference number: 6 (lower is better) Translates to: GRPRLCAAPAGA*LRPRKAMWRTS Trigger: ACTGGTTCTCCACATTGCTTTACGCGGGCGGAGCCAGGCTCCGGCCGGGGCGGCGCACAGCCTCGGGCGGCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000052645.13 ENSMUST00000099130.9 ENSMUST00000108117.3 ENSMUST00000108118.9 ENSMUST00000138949.2 ENSMUST00000149449.8 ENSMUST00000198158.5 |
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| CDS CCA 72 bp | AGGCAGCTATCCGTCCTTCTGAGCGCCACTGCTGAATaGCAGCTTGTAGCTCGGCCCCGCAGGAGCCCGGGG | + |
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Preference number: 6 (lower is better) Translates to: RQLSVLLSATAE*QLVARPRRSPG Trigger: CCCCGGGCTCCTGCGGGGCCGAGCTACAAGCTGCCATTCAGCAGTGGCGCTCAGAAGGACGGATAGCTGCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138949.2 |
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| CDS GCA 72 bp | GCATCCAGCCCGTGCAACGTATGGTGCCGCGACAAGTaGACCGAGACGCCCCCAAATCTGTCCAGCTCGCCT | + |
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Preference number: 6 (lower is better) Translates to: ASSPCNVWCRDK*TETPPNLSSSP Trigger: AGGCGAGCTGGACAGATTTGGGGGCGTCTCGGTGCACTTGTCGCGGCACCATACGTTGCACGGGCTGGATGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000052645.13 ENSMUST00000099130.9 ENSMUST00000108117.3 ENSMUST00000108118.9 ENSMUST00000149449.8 ENSMUST00000198158.5 |
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| CDS GCA 72 bp | ACAGGCCTCCTGGAAACTTCCACATGTTTTTCAACCTaGAAGAGCCTCCGGAAGGCGGCGGCATCCAGCCCG | + |
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Preference number: 6 (lower is better) Translates to: TGLLETSTCFST*KSLRKAAASSP Trigger: CGGGCTGGATGCCGCCGCCTTCCGGAGGCTCTTGCAGGTTGAAAAACATGTGGAAGTTTCCAGGAGGCCTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108117.3 |
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| CDS CCA 72 bp | ACCTCTCGGACTGCTGTGTCTGCTGCAACTCCAACTTaGTGTGTAGCATATCCCGGGAGTCTGCTGGGTCCT | + |
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Preference number: 6 (lower is better) Translates to: TSRTAVSAATPT*CVAYPGSLLGP Trigger: AGGACCCAGCAGACTCCCGGGATATGCTACACACCAAGTTGGAGTTGCAGCAGACACAGCAGTCCGAGAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149449.8 |
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| CDS CAA 72 bp | AACCTCTCGGACTGCTGTGTCTGCTGCAACTCCAACTaGGTGTGTAGCATATCCCGGGAGTCTGCTGGGTCC | + |
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Preference number: 6 (lower is better) Translates to: NLSDCCVCCNSN*VCSISRESAGS Trigger: GGACCCAGCAGACTCCCGGGATATGCTACACACCAAGTTGGAGTTGCAGCAGACACAGCAGTCCGAGAGGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149449.8 |
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| CDS CCA 72 bp | GGTCCTTCTCCCAGCCACAGAGTCAGTGTTGAGGAATaGGGTTTTGCGTGGTGGAAGCAAAAGCCCAGGGAA | + |
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Preference number: 6 (lower is better) Translates to: GPSPSHRVSVEE*GFAWWKQKPRE Trigger: TTCCCTGGGCTTTTGCTTCCACCACGCAAAACCCCATTCCTCAACACTGACTCTGTGGCTGGGAGAAGGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000052645.13 ENSMUST00000099130.9 ENSMUST00000138949.2 ENSMUST00000149449.8 ENSMUST00000198158.5 |
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| CDS CAA 90 bp | CTCTTCAAAAACCTCTCGGACTGCTGTGTCTGCTGCAACTCCAACTaGGTGTGTAGCATATCCCGGGAGTCTGCTGGGTCCTTCTCCCAG | + |
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Preference number: 6 (lower is better) Translates to: LFKNLSDCCVCCNSN*VCSISRESAGSFSQ Trigger: CTGGGAGAAGGACCCAGCAGACTCCCGGGATATGCTACACACCAAGTTGGAGTTGCAGCAGACACAGCAGTCCGAGAGGTTTTTGAAGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149449.8 |
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| CDS CCA 72 bp | AACCTCTCGGACTGCTGTGTCTGCAATATCTTCTCCTaGCTCCGACAGGCCTCCTGGAAACTTCCACATGTT | + |
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Preference number: 6 (lower is better) Translates to: NLSDCCVCNIFS*LRQASWKLPHV Trigger: AACATGTGGAAGTTTCCAGGAGGCCTGTCGGAGCCAGGAGAAGATATTGCAGACACAGCAGTCCGAGAGGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052645.13 ENSMUST00000108117.3 ENSMUST00000108118.9 |
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| CDS CAA 72 bp | GGTGCTAACATCAAATACAGCACCTGCAACTCCAACTaGGTGTGTAGCATATCCCGGGAGTCTGCTGGGTCC | + |
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Preference number: 6 (lower is better) Translates to: GANIKYSTCNSN*VCSISRESAGS Trigger: GGACCCAGCAGACTCCCGGGATATGCTACACACCAAGTTGGAGTTGCAGGTGCTGTATTTGATGTTAGCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052645.13 ENSMUST00000099130.9 ENSMUST00000138949.2 |
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| CDS CAA 90 bp | CTCCTGTGTTGCTGCCGGATGCTCAACAGGGACCTGAATTCTGACTaGACACCAGTCTCTTCAAAAACCTCTCGGACTGCTGTGTCTGCA | + |
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Preference number: 6 (lower is better) Translates to: LLCCCRMLNRDLNSD*TPVSSKTSRTAVSA Trigger: TGCAGACACAGCAGTCCGAGAGGTTTTTGAAGAGACTGGTGTCAAGTCAGAATTCAGGTCCCTGTTGAGCATCCGGCAGCAACACAGGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000052645.13 ENSMUST00000108118.9 ENSMUST00000146324.8 |
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| CDS CAA 90 bp | CTCCTGTGTTGCTGCCGGATGCTCAACAGGGACCTGAATTCTGACTaGACACCAGTCTCTTCAAAAACCTCTCGGACTGCTGTGTCTGCT | + |
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Preference number: 6 (lower is better) Translates to: LLCCCRMLNRDLNSD*TPVSSKTSRTAVSA Trigger: AGCAGACACAGCAGTCCGAGAGGTTTTTGAAGAGACTGGTGTCAAGTCAGAATTCAGGTCCCTGTTGAGCATCCGGCAGCAACACAGGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149449.8 |
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| CDS CAA 90 bp | TACTTTCCTGGTGCTAACATCAAATACAGCACCTGCAACTCCAACTaGGTGTGTAGCATATCCCGGGAGTCTGCTGGGTCCTTCTCCCAG | + |
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Preference number: 6 (lower is better) Translates to: YFPGANIKYSTCNSN*VCSISRESAGSFSQ Trigger: CTGGGAGAAGGACCCAGCAGACTCCCGGGATATGCTACACACCAAGTTGGAGTTGCAGGTGCTGTATTTGATGTTAGCACCAGGAAAGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052645.13 ENSMUST00000099130.9 ENSMUST00000138949.2 |
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| CDS TCA 72 bp | GTGTTGCTGCCGGATGCTCAACAGGGACCTGAATTCTaGCTTGACACCAGTCTCTTCAAAAACCTCTCGGAC | + |
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Preference number: 6 (lower is better) Translates to: VLLPDAQQGPEF*LDTSLFKNLSD Trigger: GTCCGAGAGGTTTTTGAAGAGACTGGTGTCAAGTCAGAATTCAGGTCCCTGTTGAGCATCCGGCAGCAACAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000052645.13 ENSMUST00000099130.9 ENSMUST00000108118.9 ENSMUST00000146324.8 ENSMUST00000149449.8 |
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| CDS GCA 72 bp | AGTCTCTTCAAAAACCTCTCGGACTGCTGTGTCTGCTaGAACTCCAACTTGGTGTGTAGCATATCCCGGGAG | + |
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Preference number: 6 (lower is better) Translates to: SLFKNLSDCCVC*NSNLVCSISRE Trigger: CTCCCGGGATATGCTACACACCAAGTTGGAGTTGCAGCAGACACAGCAGTCCGAGAGGTTTTTGAAGAGACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149449.8 |
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| CDS GCA 72 bp | ACCAGTCTCTTCAAAAACCTCTCGGACTGCTGTGTCTaGTGCAACTCCAACTTGGTGTGTAGCATATCCCGG | + |
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Preference number: 6 (lower is better) Translates to: TSLFKNLSDCCV*CNSNLVCSISR Trigger: CCGGGATATGCTACACACCAAGTTGGAGTTGCAGCAGACACAGCAGTCCGAGAGGTTTTTGAAGAGACTGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149449.8 |
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| CDS CCA 72 bp | GTGCTAACATCAAATACAGCACCTGCAACTCCAACTTaGTGTGTAGCATATCCCGGGAGTCTGCTGGGTCCT | + |
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Preference number: 6 (lower is better) Translates to: VLTSNTAPATPT*CVAYPGSLLGP Trigger: AGGACCCAGCAGACTCCCGGGATATGCTACACACCAAGTTGGAGTTGCAGGTGCTGTATTTGATGTTAGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052645.13 ENSMUST00000099130.9 ENSMUST00000138949.2 |
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| CDS CAA 72 bp | TGCTGCCGGATGCTCAACAGGGACCTGAATTCTGACTaGACACCAGTCTCTTCAAAAACCTCTCGGACTGCT | + |
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Preference number: 6 (lower is better) Translates to: CCRMLNRDLNSD*TPVSSKTSRTA Trigger: AGCAGTCCGAGAGGTTTTTGAAGAGACTGGTGTCAAGTCAGAATTCAGGTCCCTGTTGAGCATCCGGCAGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000052645.13 ENSMUST00000099130.9 ENSMUST00000108118.9 ENSMUST00000146324.8 ENSMUST00000149449.8 |
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| CDS CAA 90 bp | CTCCTGTGTTGCTGCCGGATGCTCAACAGGGACCTGAATTCTGACTaGACACCAGTCTCTTCAAAAACCTCTCGGACTGCTGTGTCAATA | + |
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Preference number: 6 (lower is better) Translates to: LLCCCRMLNRDLNSD*TPVSSKTSRTAVSI Trigger: TATTGACACAGCAGTCCGAGAGGTTTTTGAAGAGACTGGTGTCAAGTCAGAATTCAGGTCCCTGTTGAGCATCCGGCAGCAACACAGGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099130.9 |
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| CDS CCA 72 bp | AAAAACCTCTCGGACTGCTGTGTCAATATCTTCTCCTaGCTCCGACAGGCCTCCTGGAAACTTCCACATGTT | + |
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Preference number: 6 (lower is better) Translates to: KNLSDCCVNIFS*LRQASWKLPHV Trigger: AACATGTGGAAGTTTCCAGGAGGCCTGTCGGAGCCAGGAGAAGATATTGACACAGCAGTCCGAGAGGTTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099130.9 |
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| CDS GCA 72 bp | CAGTACTTTCCTGGTGCTAACATCAAATACAGCACCTaGAACTCCAACTTGGTGTGTAGCATATCCCGGGAG | + |
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Preference number: 6 (lower is better) Translates to: QYFPGANIKYST*NSNLVCSISRE Trigger: CTCCCGGGATATGCTACACACCAAGTTGGAGTTGCAGGTGCTGTATTTGATGTTAGCACCAGGAAAGTACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052645.13 ENSMUST00000099130.9 ENSMUST00000138949.2 |
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