Pregenerated sensors for NUDT5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025817Ensembl transcript IDs: ENSMUST00000026927.10, ENSMUST00000127116.7, ENSMUST00000179748.8, ENSMUST00000194933.2
Found 100 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGTCCTCTTTTCCTGGTGACAGCTACGAGTGCTGTCCAGCTGTATTaGCCATGCCTTCTACTCCAATGCCCCCAAGTATTTCCTCTCTCC | + |
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Preference number: 1 (lower is better) Translates to: CPLFLVTATSAVQLY*PCLLLQCPQVFPLS Trigger: GGAGAGAGGAAATACTTGGGGGCATTGGAGTAGAAGGCATGGCCAATACAGCTGGACAGCACTCGTAGCTGTCACCAGGAAAAGAGGACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026927.10 |
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| 3UTR TCA 90 bp | CCTCGTCCCCAAAGCAAGACCCAGTTCTCAAGCAGTGTCTGTAGTTaGGTGGAAGTGAGCAATGAGTATTCATGCAAGGACTTCATGTCT | + |
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Preference number: 1 (lower is better) Translates to: PRPQSKTQFSSSVCS*VEVSNEYSCKDFMS Trigger: AGACATGAAGTCCTTGCATGAATACTCATTGCTCACTTCCACTCAACTACAGACACTGCTTGAGAACTGGGTCTTGCTTTGGGGACGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026927.10 |
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| 3UTR CCA 90 bp | TTTGCTTGCCATGTGTGGTGCTACACATCTTTATTCCCAGAACTTTaGAGAGGCAGAGACAGACAGATGAATCGCTCGGAGTTCAAAGCC | + |
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Preference number: 1 (lower is better) Translates to: FACHVWCYTSLFPEL*RGRDRQMNRSEFKA Trigger: GGCTTTGAACTCCGAGCGATTCATCTGTCTGTCTCTGCCTCTCCAAAGTTCTGGGAATAAAGATGTGTAGCACCACACATGGCAAGCAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026927.10 |
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| 3UTR TCA 90 bp | ACACATCTTTATTCCCAGAACTTTGGAGAGGCAGAGACAGACAGATaGATCGCTCGGAGTTCAAAGCCAGCCTGGTCTGCAAAAGAAGTT | + |
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Preference number: 1 (lower is better) Translates to: THLYSQNFGEAETDR*IARSSKPAWSAKEV Trigger: AACTTCTTTTGCAGACCAGGCTGGCTTTGAACTCCGAGCGATTCATCTGTCTGTCTCTGCCTCTCCAAAGTTCTGGGAATAAAGATGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026927.10 ENSMUST00000179748.8 |
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| 3UTR TCA 90 bp | GGGAAGCAGTGTATCTGCCTCGCTGTTGGTCAGACAGCAAGACAGTaGTGTGGATTAGCTTCGCACACAACATTCAGAACACTGAATATT | + |
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Preference number: 1 (lower is better) Translates to: GKQCICLAVGQTARQ*CGLASHTTFRTLNI Trigger: AATATTCAGTGTTCTGAATGTTGTGTGCGAAGCTAATCCACATCACTGTCTTGCTGTCTGACCAACAGCGAGGCAGATACACTGCTTCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026927.10 |
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| 3UTR CCA 90 bp | TATTGCACCTGGTCCTATACCTGCTCTATGGAAAGGACGAATGTGTaGAGCCTGTGTCTTCATTTCAAAAGAGGGAAGGAAACGACACAG | + |
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Preference number: 1 (lower is better) Translates to: YCTWSYTCSMERTNV*SLCLHFKRGKETTQ Trigger: CTGTGTCGTTTCCTTCCCTCTTTTGAAATGAAGACACAGGCTCCACACATTCGTCCTTTCCATAGAGCAGGTATAGGACCAGGTGCAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026927.10 |
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| 3UTR TCA 90 bp | CTCATCAGACCAGAGCAGAGCCAGAACACTGGAACAACTCCTGGGTaGACTTTAGGCCTAGCATATACTAGAAACCATTTCTGCATTTCT | + |
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Preference number: 1 (lower is better) Translates to: LIRPEQSQNTGTTPG*TLGLAYTRNHFCIS Trigger: AGAAATGCAGAAATGGTTTCTAGTATATGCTAGGCCTAAAGTTCACCCAGGAGTTGTTCCAGTGTTCTGGCTCTGCTCTGGTCTGATGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026927.10 |
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| 3UTR TCA 90 bp | AAAGTACAGTTTTCAGTAGGAACAGGAGGTAGGGCTAACTTAGCTTaGGCTAAGGTCAGACACTGGAGAACACCCTGTATTTTAGAACCC | + |
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Preference number: 1 (lower is better) Translates to: KVQFSVGTGGRANLA*AKVRHWRTPCILEP Trigger: GGGTTCTAAAATACAGGGTGTTCTCCAGTGTCTGACCTTAGCTCAAGCTAAGTTAGCCCTACCTCCTGTTCCTACTGAAAACTGTACTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026927.10 |
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| 3UTR CCA 90 bp | AACATTGGAAGGGTCAGAGTCACAGGGAAGGCTACTGTGCTATACTaGGTGTTAATTTTCACACTCATTAGGAATGCAGACTTGGACTAC | + |
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Preference number: 1 (lower is better) Translates to: NIGRVRVTGKATVLY*VLIFTLIRNADLDY Trigger: GTAGTCCAAGTCTGCATTCCTAATGAGTGTGAAAATTAACACCCAGTATAGCACAGTAGCCTTCCCTGTGACTCTGACCCTTCCAATGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026927.10 |
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| 3UTR TCA 90 bp | TTCTGTAGGTTCACTGTATTTCTACAGAGCAGATCTGCATATGCTTaGGAGGGTCAAGTATGGTCATATTTTAGTTCTAAATTACTCAAT | + |
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Preference number: 1 (lower is better) Translates to: FCRFTVFLQSRSAYA*EGQVWSYFSSKLLN Trigger: ATTGAGTAATTTAGAACTAAAATATGACCATACTTGACCCTCTCAAGCATATGCAGATCTGCTCTGTAGAAATACAGTGAACCTACAGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026927.10 |
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| 3UTR CCA 90 bp | AAACCATTTCTGCATTTCTTGTGTAGTCTGATTGTTTCAGATAATTaGCTAATATACCTGCCTATACTCATGGCTACTGACATCCATATA | + |
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Preference number: 1 (lower is better) Translates to: KPFLHFLCSLIVSDN*LIYLPILMATDIHI Trigger: TATATGGATGTCAGTAGCCATGAGTATAGGCAGGTATATTAGCCAATTATCTGAAACAATCAGACTACACAAGAAATGCAGAAATGGTTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026927.10 |
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| 3UTR CAA 90 bp | TTGTCCTCTTTTCCTGGTGACAGCTACGAGTGCTGTCCAGCTGTATaGGCCATGCCTTCTACTCCAATGCCCCCAAGTATTTCCTCTCTC | + |
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Preference number: 2 (lower is better) Translates to: LSSFPGDSYECCPAV*AMPSTPMPPSISSL Trigger: GAGAGAGGAAATACTTGGGGGCATTGGAGTAGAAGGCATGGCCAATACAGCTGGACAGCACTCGTAGCTGTCACCAGGAAAAGAGGACAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026927.10 |
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| 3UTR CAA 90 bp | TTTTGCTTGCCATGTGTGGTGCTACACATCTTTATTCCCAGAACTTaGGAGAGGCAGAGACAGACAGATGAATCGCTCGGAGTTCAAAGC | + |
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Preference number: 2 (lower is better) Translates to: FCLPCVVLHIFIPRT*ERQRQTDESLGVQS Trigger: GCTTTGAACTCCGAGCGATTCATCTGTCTGTCTCTGCCTCTCCAAAGTTCTGGGAATAAAGATGTGTAGCACCACACATGGCAAGCAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026927.10 |
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| 3UTR-3UTR GCA 90 bp | TCCCTCAGTTTGTTGTTTTCAGTGCTCACTGTCCCATTTCTGAAGTGGGCACAGACCTGGTCCTATACCTaGTCTATGGAAAGGACGAAT | + |
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Preference number: 2 (lower is better) Translates to: SLSLLFSVLTVPFLKWAQTWSYT*SMERTN Trigger: ATTCGTCCTTTCCATAGAGCAGGTATAGGACCAGGT...CTGTGCCCACTTCAGAAATGGGACAGTGAGCACTGAAAACAACAAACTGAGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026927.10 |
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| 3UTR-3UTR CCA 90 bp | GTTTTCAGTGCTCACTGTCCCATTTCTGAAGTGGGCACAGAGCTAAGCCTGTGTTATTTTTGCTGGGTGTaGTGGTGTGTGCCCTTTAAT | + |
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Preference number: 2 (lower is better) Translates to: VFSAHCPISEVGTELSLCYFCWV*WCVPFN Trigger: ATTAAAGGGCACACACCACCACACCCAGCAAAAATA...ACACAGGCTTAGCTCTGTGCCCACTTCAGAAATGGGACAGTGAGCACTGAAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026927.10 |
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| 3UTR-3UTR CCA 90 bp | TCCCTCAGTTTGTTGTTTTCAGTGCTCACTGTCCCATTTCTGAAGTGGGCACAGCCAGAAACCACATGGTaGCTCACAACTACCTGTAAT | + |
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Preference number: 2 (lower is better) Translates to: SLSLLFSVLTVPFLKWAQPETTW*LTTTCN Trigger: ATTACAGGTAGTTGTGAGCCACCATGTGGTTTCTGG...CTGTGCCCACTTCAGAAATGGGACAGTGAGCACTGAAAACAACAAACTGAGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026927.10 |
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| 3UTR-3UTR TCA 90 bp | AAAAGAAGTTCCAGGCTAGCCAGGGCTACATGGCGATACCCTGTCTTAAAACAAATGGGTAGAAATAGCTaGCCTAATTGGGAGCTTGAG | + |
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Preference number: 2 (lower is better) Translates to: KRSSRLARATWRYPVLKQMGRNS*PNWELE Trigger: CTCAAGCTCCCAATTAGGTCAGCTATTTCTACCCAT...TTGTTTTAAGACAGGGTATCGCCATGTAGCCCTGGCTAGCCTGGAACTTCTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026927.10 ENSMUST00000179748.8 |
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| 3UTR CAA 90 bp | CTATCCCCAAACTGCCACTCAGCCTGGATGGGCAAAAATCAAGCATaGAAGTTATTTCTGTCACTGGACACAATTGCTTCCAATTCCCTT | + |
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Preference number: 2 (lower is better) Translates to: LSPNCHSAWMGKNQA*KLFLSLDTIASNSL Trigger: AAGGGAATTGGAAGCAATTGTGTCCAGTGACAGAAATAACTTCAATGCTTGATTTTTGCCCATCCAGGCTGAGTGGCAGTTTGGGGATAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026927.10 |
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| 3UTR-3UTR TCA 90 bp | GCTAAGCCTGTGTGCAGCATCAGTACCAGCTGCCTTAAAACTGAAGTTTACATTATGGGTAGAAATAGCTaGCCTAATTGGGAGCTTGAG | + |
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Preference number: 2 (lower is better) Translates to: AKPVCSISTSCLKTEVYIMGRNS*PNWELE Trigger: CTCAAGCTCCCAATTAGGTCAGCTATTTCTACCCAT...AATGTAAACTTCAGTTTTAAGGCAGCTGGTACTGATGCTGCACACAGGCTTAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026927.10 |
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| 3UTR-3UTR CCA 90 bp | TACACATCTTTATTCCCAGAACTTTGGAGAGGCAGAGACAGACAGATGAATCGCAGTTCAAAGCCAGCCTaGTCTGCAAAAGAAGTTCCA | + |
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Preference number: 2 (lower is better) Translates to: YTSLFPELWRGRDRQMNRSSKPA*SAKEVP Trigger: TGGAACTTCTTTTGCAGACCAGGCTGGCTTTGAACT...GCGATTCATCTGTCTGTCTCTGCCTCTCCAAAGTTCTGGGAATAAAGATGTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026927.10 ENSMUST00000179748.8 |
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| 3UTR-3UTR TCA 90 bp | TCCCTCAGTTTGTTGTTTTCAGTGCTCACTGTCCCATTTCTGAAGTGGGCACAGTTAGAACCCACTTTCTaGGTTTTCCAAATGAACGAA | + |
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Preference number: 2 (lower is better) Translates to: SLSLLFSVLTVPFLKWAQLEPTF*VFQMNE Trigger: TTCGTTCATTTGGAAAACTCAGAAAGTGGGTTCTAA...CTGTGCCCACTTCAGAAATGGGACAGTGAGCACTGAAAACAACAAACTGAGGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026927.10 |
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| 3UTR-3UTR TCA 90 bp | TTGTTAAGGAACAGGCTGAAGTTGGTGGAATGGGTGCTTTGTTTTTCTAAATGTTCACTGTCCCATTTCTaGAGTGGGCACAGAGCTAAG | + |
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Preference number: 2 (lower is better) Translates to: LLRNRLKLVEWVLCFSKCSLSHF*SGHRAK Trigger: CTTAGCTCTGTGCCCACTTCAGAAATGGGACAGTGA...ACATTTAGAAAAACAAAGCACCCATTCCACCAACTTCAGCCTGTTCCTTAACAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026927.10 |
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| 3UTR-3UTR CCA 90 bp | TTGTTAAGGAACAGGCTGAAGTTGGTGGAATGGGTGCTTTGTTTTTCTAAATGTTTTTGCTGGGTGTGGTaGTGTGTGCCCTTTAATCCC | + |
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Preference number: 2 (lower is better) Translates to: LLRNRLKLVEWVLCFSKCFCWVW*CVPFNP Trigger: GGGATTAAAGGGCACACACCACCACACCCAGCAAAA...ACATTTAGAAAAACAAAGCACCCATTCCACCAACTTCAGCCTGTTCCTTAACAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000026927.10 |
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| 3UTR-3UTR TCA 90 bp | TTGTTAAGGAACAGGCTGAAGTTGGTGGAATGGGTGCTTTGTTTTTCTAAATGTAGCAGTGTCTGTAGTTaGGTGGAAGTGAGCAATGAG | + |
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Preference number: 2 (lower is better) Translates to: LLRNRLKLVEWVLCFSKCSSVCS*VEVSNE Trigger: CTCATTGCTCACTTCCACTCAACTACAGACACTGCT...ACATTTAGAAAAACAAAGCACCCATTCCACCAACTTCAGCCTGTTCCTTAACAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026927.10 |
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| 3UTR-3UTR CCA 90 bp | AAAAGAAGTTCCAGGCTAGCCAGGGCTACATGGCGATACCCTGTCTTAAAACAAATAGTGAAGGCCGCATaGTTTCATTTACAAATCATG | + |
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Preference number: 2 (lower is better) Translates to: KRSSRLARATWRYPVLKQIVKAA*FHLQIM Trigger: CATGATTTGTAAATGAAACCATGCGGCCTTCACTAT...TTGTTTTAAGACAGGGTATCGCCATGTAGCCCTGGCTAGCCTGGAACTTCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026927.10 ENSMUST00000179748.8 |
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| 3UTR-3UTR CCA 90 bp | TTGTTAAGGAACAGGCTGAAGTTGGTGGAATGGGTGCTTTGTTTTTCTAAATGTATCCCAGAAACCACATaGTGGCTCACAACTACCTGT | + |
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Preference number: 2 (lower is better) Translates to: LLRNRLKLVEWVLCFSKCIPETT*WLTTTC Trigger: ACAGGTAGTTGTGAGCCACCATGTGGTTTCTGGGAT...ACATTTAGAAAAACAAAGCACCCATTCCACCAACTTCAGCCTGTTCCTTAACAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026927.10 |
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| 3UTR-3UTR GCA 90 bp | TTGTTAAGGAACAGGCTGAAGTTGGTGGAATGGGTGCTTTGTTTTTCTAAATGTTCTACAGAGCAGATCTaGATATGCTTGAGAGGGTCA | + |
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Preference number: 2 (lower is better) Translates to: LLRNRLKLVEWVLCFSKCSTEQI*ICLRGS Trigger: TGACCCTCTCAAGCATATGCAGATCTGCTCTGTAGA...ACATTTAGAAAAACAAAGCACCCATTCCACCAACTTCAGCCTGTTCCTTAACAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026927.10 |
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| 3UTR-3UTR GCA 90 bp | TTGTTAAGGAACAGGCTGAAGTTGGTGGAATGGGTGCTTTGTTTTTCTAAATGTGAGCTTACATTTTTGTaGATAAAAATGTGTGTCGGC | + |
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Preference number: 2 (lower is better) Translates to: LLRNRLKLVEWVLCFSKCELTFL*IKMCVG Trigger: GCCGACACACATTTTTATGCACAAAAATGTAAGCTC...ACATTTAGAAAAACAAAGCACCCATTCCACCAACTTCAGCCTGTTCCTTAACAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000026927.10 |
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| 3UTR-3UTR GCA 90 bp | AAATATTTGTTAAGGAACAGGCTGAAGTTGGTGGAATGGGTGCTTTGTTTTTCTAGCAATGAGTATTCATaGAAGGACTTCATGTCTGTG | + |
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Preference number: 2 (lower is better) Translates to: KYLLRNRLKLVEWVLCFSSNEYS*KDFMSV Trigger: CACAGACATGAAGTCCTTGCATGAATACTCATTGCT...AGAAAAACAAAGCACCCATTCCACCAACTTCAGCCTGTTCCTTAACAAATATTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026927.10 |
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| 3UTR CAA 90 bp | TCAATGGCAGGAGCTAGGGTCCTTGGGAAACATTTTACTCTTCATTaGACACCACCCAGTTCTTTGTACATACTTTATTTTACTTATTTT | + |
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Preference number: 2 (lower is better) Translates to: SMAGARVLGKHFTLH*TPPSSLYILYFTYF Trigger: AAAATAAGTAAAATAAAGTATGTACAAAGAACTGGGTGGTGTCAAATGAAGAGTAAAATGTTTCCCAAGGACCCTAGCTCCTGCCATTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026927.10 |
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| 3UTR-3UTR CCA 90 bp | CCTCTCTGTAATTATAATTCCATACCACATGCATCTGTGCTGCTTTTACGAAAAATAGTGAAGGCCGCATaGTTTCATTTACAAATCATG | + |
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Preference number: 2 (lower is better) Translates to: PLCNYNSIPHASVLLLRKIVKAA*FHLQIM Trigger: CATGATTTGTAAATGAAACCATGCGGCCTTCACTAT...TTTTCGTAAAAGCAGCACAGATGCATGTGGTATGGAATTATAATTACAGAGAGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026927.10 ENSMUST00000179748.8 |
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| 3UTR CCA 72 bp | ACTCCCACAGGAAAGAGACCCAGGGGCCAGGGAAGATaGGGTACACCTTGTATCTCGGCCGATACTCAAGGC | + |
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Preference number: 3 (lower is better) Translates to: TPTGKRPRGQGR*GTPCISADTQG Trigger: GCCTTGAGTATCGGCCGAGATACAAGGTGTACCCCATCTTCCCTGGCCCCTGGGTCTCTTTCCTGTGGGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026927.10 |
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| 3UTR GCA 72 bp | GTGACAGCTACGAGTGCTGTCCAGCTGTATTGGCCATaGCTTCTACTCCAATGCCCCCAAGTATTTCCTCTC | + |
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Preference number: 3 (lower is better) Translates to: VTATSAVQLYWP*LLLQCPQVFPL Trigger: GAGAGGAAATACTTGGGGGCATTGGAGTAGAAGGCATGGCCAATACAGCTGGACAGCACTCGTAGCTGTCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026927.10 |
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| 3UTR-3UTR CAA 90 bp | TCTGAAGTGGGCACAGAGCTAAGCCTGTGTGCAGCATCAGTACCAGCTGCCTTAGAAGTGTGTGCACACTaGAAGGAAGGATCCCGAGTT | + |
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Preference number: 3 (lower is better) Translates to: SEVGTELSLCAASVPAALEVCAH*KEGSRV Trigger: AACTCGGGATCCTTCCTTCAAGTGTGCACACACTTC...TAAGGCAGCTGGTACTGATGCTGCACACAGGCTTAGCTCTGTGCCCACTTCAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026927.10 |
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| 3UTR CCA 72 bp | AGCAGAGCTCATCAGACCAGAGCAGAGCCAGAACACTaGAACAACTCCTGGGTGAACTTTAGGCCTAGCATA | + |
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Preference number: 3 (lower is better) Translates to: SRAHQTRAEPEH*NNSWVNFRPSI Trigger: TATGCTAGGCCTAAAGTTCACCCAGGAGTTGTTCCAGTGTTCTGGCTCTGCTCTGGTCTGATGAGCTCTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026927.10 |
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| 3UTR CCA 72 bp | TTCCTGGTGACAGCTACGAGTGCTGTCCAGCTGTATTaGCCATGCCTTCTACTCCAATGCCCCCAAGTATTT | + |
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Preference number: 3 (lower is better) Translates to: FLVTATSAVQLY*PCLLLQCPQVF Trigger: AAATACTTGGGGGCATTGGAGTAGAAGGCATGGCCAATACAGCTGGACAGCACTCGTAGCTGTCACCAGGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026927.10 |
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| 3UTR TCA 72 bp | TCAGTTTGTTGTTTTCAGTGCTCACTGTCCCATTTCTaGAGTGGGCACAGAGCTAAGCCTGTGTGCAGCATC | + |
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Preference number: 3 (lower is better) Translates to: SVCCFQCSLSHF*SGHRAKPVCSI Trigger: GATGCTGCACACAGGCTTAGCTCTGTGCCCACTTCAGAAATGGGACAGTGAGCACTGAAAACAACAAACTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026927.10 |
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| 3UTR GCA 72 bp | TTTCATTTGTCCTCTTTTCCTGGTGACAGCTACGAGTaGTGTCCAGCTGTATTGGCCATGCCTTCTACTCCA | + |
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Preference number: 3 (lower is better) Translates to: FHLSSFPGDSYE*CPAVLAMPSTP Trigger: TGGAGTAGAAGGCATGGCCAATACAGCTGGACAGCACTCGTAGCTGTCACCAGGAAAAGAGGACAAATGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026927.10 |
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| 3UTR CCA 72 bp | CATGTGTGGTGCTACACATCTTTATTCCCAGAACTTTaGAGAGGCAGAGACAGACAGATGAATCGCTCGGAG | + |
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Preference number: 3 (lower is better) Translates to: HVWCYTSLFPEL*RGRDRQMNRSE Trigger: CTCCGAGCGATTCATCTGTCTGTCTCTGCCTCTCCAAAGTTCTGGGAATAAAGATGTGTAGCACCACACATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026927.10 ENSMUST00000179748.8 |
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| 3UTR-3UTR CAA 90 bp | GTTTTCAGTGCTCACTGTCCCATTTCTGAAGTGGGCACAGAGCTAAGCCTGTGTCAAAAGTTGGTATATTaGGGGAGACAGGGCCATGAT | + |
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Preference number: 3 (lower is better) Translates to: VFSAHCPISEVGTELSLCQKLVY*GRQGHD Trigger: ATCATGGCCCTGTCTCCCCAAATATACCAACTTTTG...ACACAGGCTTAGCTCTGTGCCCACTTCAGAAATGGGACAGTGAGCACTGAAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026927.10 |
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| 3UTR TCA 72 bp | CCAGAGCAGAGCCAGAACACTGGAACAACTCCTGGGTaGACTTTAGGCCTAGCATATACTAGAAACCATTTC | + |
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Preference number: 3 (lower is better) Translates to: PEQSQNTGTTPG*TLGLAYTRNHF Trigger: GAAATGGTTTCTAGTATATGCTAGGCCTAAAGTTCACCCAGGAGTTGTTCCAGTGTTCTGGCTCTGCTCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026927.10 |
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| 3UTR TCA 72 bp | TGTATCTGCCTCGCTGTTGGTCAGACAGCAAGACAGTaGTGTGGATTAGCTTCGCACACAACATTCAGAACA | + |
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Preference number: 3 (lower is better) Translates to: CICLAVGQTARQ*CGLASHTTFRT Trigger: TGTTCTGAATGTTGTGTGCGAAGCTAATCCACATCACTGTCTTGCTGTCTGACCAACAGCGAGGCAGATACA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026927.10 |
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| 3UTR-3UTR CAA 90 bp | ATCACAGTAGCAGAGCTCATCAGACCAGAGCAGAGCCAGAACACTGGAACAACTACAAGTAGCTACACTTaGACCACAAATGTTATGCTG | + |
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Preference number: 3 (lower is better) Translates to: ITVAELIRPEQSQNTGTTTSSYT*TTNVML Trigger: CAGCATAACATTTGTGGTCAAAGTGTAGCTACTTGT...AGTTGTTCCAGTGTTCTGGCTCTGCTCTGGTCTGATGAGCTCTGCTACTGTGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026927.10 |
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| 3UTR TCA 72 bp | TTTTCAGTAGGAACAGGAGGTAGGGCTAACTTAGCTTaGGCTAAGGTCAGACACTGGAGAACACCCTGTATT | + |
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Preference number: 3 (lower is better) Translates to: FSVGTGGRANLA*AKVRHWRTPCI Trigger: AATACAGGGTGTTCTCCAGTGTCTGACCTTAGCTCAAGCTAAGTTAGCCCTACCTCCTGTTCCTACTGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026927.10 |
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| 3UTR TCA 72 bp | CAAAGCAAGACCCAGTTCTCAAGCAGTGTCTGTAGTTaGGTGGAAGTGAGCAATGAGTATTCATGCAAGGAC | + |
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Preference number: 3 (lower is better) Translates to: QSKTQFSSSVCS*VEVSNEYSCKD Trigger: GTCCTTGCATGAATACTCATTGCTCACTTCCACTCAACTACAGACACTGCTTGAGAACTGGGTCTTGCTTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026927.10 |
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| 3UTR CCA 72 bp | TGGTCCTATACCTGCTCTATGGAAAGGACGAATGTGTaGAGCCTGTGTCTTCATTTCAAAAGAGGGAAGGAA | + |
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Preference number: 3 (lower is better) Translates to: WSYTCSMERTNV*SLCLHFKRGKE Trigger: TTCCTTCCCTCTTTTGAAATGAAGACACAGGCTCCACACATTCGTCCTTTCCATAGAGCAGGTATAGGACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026927.10 |
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| 3UTR TCA 72 bp | ACTGCCACTCAGCCTGGATGGGCAAAAATCAAGCATTaGAGTTATTTCTGTCACTGGACACAATTGCTTCCA | + |
|
Preference number: 3 (lower is better) Translates to: TATQPGWAKIKH*SYFCHWTQLLP Trigger: TGGAAGCAATTGTGTCCAGTGACAGAAATAACTTCAATGCTTGATTTTTGCCCATCCAGGCTGAGTGGCAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026927.10 |
||
| 3UTR TCA 72 bp | TGTAAAACAATATTTTCGGAGGTAAGGTTAGGAAACTaGAGTGTGTGCACACTTGAAGGAAGGATCCCGAGT | + |
|
Preference number: 3 (lower is better) Translates to: CKTIFSEVRLGN*SVCTLEGRIPS Trigger: ACTCGGGATCCTTCCTTCAAGTGTGCACACACTTCAGTTTCCTAACCTTACCTCCGAAAATATTGTTTTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026927.10 |
||
| 3UTR TCA 72 bp | TGTCTTCATTTCAAAAGAGGGAAGGAAACGACACAGTaGAATAGATGTCCTAGGGAACTTACAGGCAAAAGT | + |
|
Preference number: 3 (lower is better) Translates to: CLHFKRGKETTQ*NRCPRELTGKS Trigger: ACTTTTGCCTGTAAGTTCCCTAGGACATCTATTTCACTGTGTCGTTTCCTTCCCTCTTTTGAAATGAAGACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026927.10 |
||
| 3UTR CCA 72 bp | TGTCCTAGGGAACTTACAGGCAAAAGTTGGTATATTTaGGGAGACAGGGCCATGATTATAAACACAAAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: CPRELTGKSWYI*GDRAMIINTKE Trigger: TTCTTTTGTGTTTATAATCATGGCCCTGTCTCCCCAAATATACCAACTTTTGCCTGTAAGTTCCCTAGGACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026927.10 |
||
| 3UTR-3UTR CAA 90 bp | TTGTTAAGGAACAGGCTGAAGTTGGTGGAATGGGTGCTTTGTTTTTCTAAATGTATTAGGAATGCAGACTaGGACTACAAAGTTCCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: LLRNRLKLVEWVLCFSKCIRNAD*DYKVPE Trigger: TTCTGGAACTTTGTAGTCCAAGTCTGCATTCCTAAT...ACATTTAGAAAAACAAAGCACCCATTCCACCAACTTCAGCCTGTTCCTTAACAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026927.10 |
||
| 3UTR TCA 72 bp | GGAGGTAAGGTTAGGAAACTGAAGTGTGTGCACACTTaGAGGAAGGATCCCGAGTTTTCATATATTTTTAAT | + |
|
Preference number: 3 (lower is better) Translates to: GGKVRKLKCVHT*RKDPEFSYIFN Trigger: ATTAAAAATATATGAAAACTCGGGATCCTTCCTTCAAGTGTGCACACACTTCAGTTTCCTAACCTTACCTCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026927.10 |
||
| 3UTR TCA 72 bp | GAGCTAGGGTCCTTGGGAAACATTTTACTCTTCATTTaGCACCACCCAGTTCTTTGTACATACTTTATTTTA | + |
|
Preference number: 3 (lower is better) Translates to: ELGSLGNILLFI*HHPVLCTYFIL Trigger: TAAAATAAAGTATGTACAAAGAACTGGGTGGTGTCAAATGAAGAGTAAAATGTTTCCCAAGGACCCTAGCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026927.10 |
||
| 3UTR TCA 72 bp | GTGGATTATAAGCATGTACCACAAGTAGCTACACTTTaGCCACAAATGTTATGCTGTATTGATTTTACATCT | + |
|
Preference number: 3 (lower is better) Translates to: VDYKHVPQVATL*PQMLCCIDFTS Trigger: AGATGTAAAATCAATACAGCATAACATTTGTGGTCAAAGTGTAGCTACTTGTGGTACATGCTTATAATCCAC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026927.10 |
||
| CDS-3UTR CCA 90 bp | CTCGGAGTTCAAAGCCAGCCTGGTCTGCAAAAGAAGTTCCAGGCTAGCCAGGGCCTCCATCCCCTGGTTTaGGTTTTGGCCTTACATTTC | + |
|
Preference number: 4 (lower is better) Translates to: LGVQSQPGLQKKFQASQGLHPLV*VLALHF Trigger: GAAATGTAAGGCCAAAACCCAAACCAGGGGATGGAG...GCCCTGGCTAGCCTGGAACTTCTTTTGCAGACCAGGCTGGCTTTGAACTCCGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026927.10 ENSMUST00000179748.8 |
||
| CDS-3UTR CCA 90 bp | TCTGAAGTGGGCACAGAGCTAAGCCTGTGTGCAGCATCAGTACCAGCTGCCTTAAACAAGGTGCTTGCCTaGAGAAGACTCTGTGGATTC | + |
|
Preference number: 4 (lower is better) Translates to: SEVGTELSLCAASVPAALNKVLA*RRLCGF Trigger: GAATCCACAGAGTCTTCTCCAGGCAAGCACCTTGTT...TAAGGCAGCTGGTACTGATGCTGCACACAGGCTTAGCTCTGTGCCCACTTCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026927.10 |
||
| CDS-3UTR CCA 90 bp | GTTTTCAGTGCTCACTGTCCCATTTCTGAAGTGGGCACAGAGCTAAGCCTGTGTAGGATGACGCACTCATaGTGCAGGGTTCTTTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VFSAHCPISEVGTELSLCRMTHS*CRVLCS Trigger: GCTGCAAAGAACCCTGCACCATGAGTGCGTCATCCT...ACACAGGCTTAGCTCTGTGCCCACTTCAGAAATGGGACAGTGAGCACTGAAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026927.10 |
||
| CDS-3UTR CCA 90 bp | CTGCAAAAGAAGTTCCAGGCTAGCCAGGGCTACATGGCGATACCCTGTCTTAAAAGGATGACGCACTCATaGTGCAGGGTTCTTTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LQKKFQASQGYMAIPCLKRMTHS*CRVLCS Trigger: GCTGCAAAGAACCCTGCACCATGAGTGCGTCATCCT...TTTAAGACAGGGTATCGCCATGTAGCCCTGGCTAGCCTGGAACTTCTTTTGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026927.10 ENSMUST00000179748.8 |
||
| 3UTR CAA 72 bp | TTTCCTGGTGACAGCTACGAGTGCTGTCCAGCTGTATaGGCCATGCCTTCTACTCCAATGCCCCCAAGTATT | + |
|
Preference number: 4 (lower is better) Translates to: FPGDSYECCPAV*AMPSTPMPPSI Trigger: AATACTTGGGGGCATTGGAGTAGAAGGCATGGCCAATACAGCTGGACAGCACTCGTAGCTGTCACCAGGAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026927.10 |
||
| CDS-3UTR CCA 90 bp | AGTTCCAGGCTAGCCAGGGCTACATGGCGATACCCTGTCTTAAAACAAGACAACATCCATGCACACAGCTaGAGAGCATTCCGCAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: SSRLARATWRYPVLKQDNIHAHS*RAFRNF Trigger: GAAGTTGCGGAATGCTCTCCAGCTGTGTGCATGGAT...GTTGTCTTGTTTTAAGACAGGGTATCGCCATGTAGCCCTGGCTAGCCTGGAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026927.10 ENSMUST00000179748.8 |
||
| CDS-3UTR GCA 90 bp | TTCCCAGAACTTTGGAGAGGCAGAGACAGACAGATGAATCGCTCGGAGTTCAAAATGACGCACTCATGGTaGAGGGTTCTTTGCAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: FPELWRGRDRQMNRSEFKMTHSW*RVLCST Trigger: TGTGCTGCAAAGAACCCTGCACCATGAGTGCGTCAT...TTTGAACTCCGAGCGATTCATCTGTCTGTCTCTGCCTCTCCAAAGTTCTGGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026927.10 ENSMUST00000179748.8 |
||
| CDS-3UTR CCA 90 bp | GTGTGGTGCTACACATCTTTATTCCCAGAACTTTGGAGAGGCAGAGACAGACAGTTCGATGAACCCTGCTaGAAACTCCAGGCAGTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: VWCYTSLFPELWRGRDRQFDEPC*KLQAVA Trigger: AGCTACTGCCTGGAGTTTCCAGCAGGGTTCATCGAA...CTGTCTGTCTCTGCCTCTCCAAAGTTCTGGGAATAAAGATGTGTAGCACCACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026927.10 ENSMUST00000179748.8 |
||
| CDS-3UTR CCA 90 bp | ATTCCCAGAACTTTGGAGAGGCAGAGACAGACAGATGAATCGCTCGGAGTTCAAATCCATGCACACAGCTaGAGAGCATTCCGCAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: IPRTLERQRQTDESLGVQIHAHS*RAFRNF Trigger: GAAGTTGCGGAATGCTCTCCAGCTGTGTGCATGGAT...TTGAACTCCGAGCGATTCATCTGTCTGTCTCTGCCTCTCCAAAGTTCTGGGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026927.10 ENSMUST00000179748.8 |
||
| CDS-3UTR TCA 90 bp | TGTGTGGTGCTACACATCTTTATTCCCAGAACTTTGGAGAGGCAGAGACAGACAATGTGTGGTGCAGTTTaGCAAGCCTGGATCCATGCA | + |
|
Preference number: 4 (lower is better) Translates to: CVVLHIFIPRTLERQRQTMCGAV*QAWIHA Trigger: TGCATGGATCCAGGCTTGTCAAACTGCACCACACAT...TGTCTGTCTCTGCCTCTCCAAAGTTCTGGGAATAAAGATGTGTAGCACCACACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026927.10 ENSMUST00000179748.8 |
||
| CDS-3UTR GCA 90 bp | TGTGTGGTGCTACACATCTTTATTCCCAGAACTTTGGAGAGGCAGAGACAGACAACAAGCCTGGATCCATaGACACAGCTGGAGAGCATT | + |
|
Preference number: 4 (lower is better) Translates to: CVVLHIFIPRTLERQRQTTSLDP*TQLESI Trigger: AATGCTCTCCAGCTGTGTGCATGGATCCAGGCTTGT...TGTCTGTCTCTGCCTCTCCAAAGTTCTGGGAATAAAGATGTGTAGCACCACACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026927.10 ENSMUST00000179748.8 |
||
| CDS-3UTR GCA 90 bp | CTGCAAAAGAAGTTCCAGGCTAGCCAGGGCTACATGGCGATACCCTGTCTTAAATGTAAGGTGTTGTTCTaGTCCCAAAGCGTCAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LQKKFQASQGYMAIPCLKCKVLF*SQSVKS Trigger: AGACTTGACGCTTTGGGAGCAGAACAACACCTTACA...TTTAAGACAGGGTATCGCCATGTAGCCCTGGCTAGCCTGGAACTTCTTTTGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026927.10 ENSMUST00000179748.8 |
||
| CDS-3UTR CCA 90 bp | TGTGGTGCTACACATCTTTATTCCCAGAACTTTGGAGAGGCAGAGACAGACAGATTCGATGAACCCTGCTaGAAACTCCAGGCAGTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: CGATHLYSQNFGEAETDRFDEPC*KLQAVA Trigger: AGCTACTGCCTGGAGTTTCCAGCAGGGTTCATCGAA...TCTGTCTGTCTCTGCCTCTCCAAAGTTCTGGGAATAAAGATGTGTAGCACCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026927.10 ENSMUST00000179748.8 |
||
| CDS-3UTR TCA 90 bp | TTCCCAGAACTTTGGAGAGGCAGAGACAGACAGATGAATCGCTCGGAGTTCAAACTGCATCATCTCCATTaGTGGTCACTGTCACAACAT | + |
|
Preference number: 4 (lower is better) Translates to: FPELWRGRDRQMNRSEFKLHHLH*WSLSQH Trigger: ATGTTGTGACAGTGACCATCAATGGAGATGATGCAG...TTTGAACTCCGAGCGATTCATCTGTCTGTCTCTGCCTCTCCAAAGTTCTGGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026927.10 ENSMUST00000179748.8 |
||
| CDS-3UTR TCA 90 bp | ATAGTGAAGGCCGCATGGTTTCATTTACAAATCATGGCCAGTGTCCTCCTTGGCCTGCATCATCTCCATTaGTGGTCACTGTCACAACAT | + |
|
Preference number: 4 (lower is better) Translates to: IVKAAWFHLQIMASVLLGLHHLH*WSLSQH Trigger: ATGTTGTGACAGTGACCATCAATGGAGATGATGCAG...GCCAAGGAGGACACTGGCCATGATTTGTAAATGAAACCATGCGGCCTTCACTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026927.10 ENSMUST00000179748.8 |
||
| CDS-3UTR CCA 90 bp | TGTGGTGCTACACATCTTTATTCCCAGAACTTTGGAGAGGCAGAGACAGACAGAAACAAGGTGCTTGCCTaGAGAAGACTCTGTGGATTC | + |
|
Preference number: 4 (lower is better) Translates to: CGATHLYSQNFGEAETDRNKVLA*RRLCGF Trigger: GAATCCACAGAGTCTTCTCCAGGCAAGCACCTTGTT...TCTGTCTGTCTCTGCCTCTCCAAAGTTCTGGGAATAAAGATGTGTAGCACCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026927.10 ENSMUST00000179748.8 |
||
| CDS-3UTR CCA 90 bp | TTTATTCCCAGAACTTTGGAGAGGCAGAGACAGACAGATGAATCGCTCGGAGTTCTCCATCCCCTGGTTTaGGTTTTGGCCTTACATTTC | + |
|
Preference number: 4 (lower is better) Translates to: FIPRTLERQRQTDESLGVLHPLV*VLALHF Trigger: GAAATGTAAGGCCAAAACCCAAACCAGGGGATGGAG...AACTCCGAGCGATTCATCTGTCTGTCTCTGCCTCTCCAAAGTTCTGGGAATAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026927.10 ENSMUST00000179748.8 |
||
| CDS-3UTR CCA 90 bp | TTTATTCCCAGAACTTTGGAGAGGCAGAGACAGACAGATGAATCGCTCGGAGTTCTGTTTCCCAAGTTCTaGTTTTACCAGTGGGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: FIPRTLERQRQTDESLGVLFPKF*FYQWDP Trigger: TGGATCCCACTGGTAAAACCAGAACTTGGGAAACAG...AACTCCGAGCGATTCATCTGTCTGTCTCTGCCTCTCCAAAGTTCTGGGAATAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026927.10 ENSMUST00000179748.8 |
||
| CDS-3UTR GCA 90 bp | ATCTTTATTCCCAGAACTTTGGAGAGGCAGAGACAGACAGATGAATCGCTCGGATGGCCTTACATTTCCTaGATCATCTCCATTGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: IFIPRTLERQRQTDESLGWPYIS*IISIDG Trigger: ACCATCAATGGAGATGATGCAGGAAATGTAAGGCCA...TCCGAGCGATTCATCTGTCTGTCTCTGCCTCTCCAAAGTTCTGGGAATAAAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026927.10 ENSMUST00000179748.8 |
||
| 3UTR CAA 72 bp | AACTGCCACTCAGCCTGGATGGGCAAAAATCAAGCATaGAAGTTATTTCTGTCACTGGACACAATTGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: NCHSAWMGKNQA*KLFLSLDTIAS Trigger: GGAAGCAATTGTGTCCAGTGACAGAAATAACTTCAATGCTTGATTTTTGCCCATCCAGGCTGAGTGGCAGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026927.10 |
||
| CDS-3UTR GCA 90 bp | AGGGTCCTTGGGAAACATTTTACTCTTCATTTGACACCACCCAGTTCTTTGTACTCACAACATGTGTGGTaGAGTTTGACAAGCCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: RVLGKHFTLHLTPPSSLYSQHVW*SLTSLD Trigger: ATCCAGGCTTGTCAAACTGCACCACACATGTTGTGA...GTACAAAGAACTGGGTGGTGTCAAATGAAGAGTAAAATGTTTCCCAAGGACCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026927.10 |
||
| CDS-3UTR GCA 90 bp | GGTTATATCCTCTCTGTAATTATAATTCCATACCACATGCATCTGTGCTGCTTTATGACGCACTCATGGTaGAGGGTTCTTTGCAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: GYILSVIIIPYHMHLCCFMTHSW*RVLCST Trigger: TGTGCTGCAAAGAACCCTGCACCATGAGTGCGTCAT...AAAGCAGCACAGATGCATGTGGTATGGAATTATAATTACAGAGAGGATATAACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026927.10 ENSMUST00000179748.8 |
||
| CDS-3UTR GCA 90 bp | CCTCTCTGTAATTATAATTCCATACCACATGCATCTGTGCTGCTTTTACGAAAAACAAGCCTGGATCCATaGACACAGCTGGAGAGCATT | + |
|
Preference number: 4 (lower is better) Translates to: PLCNYNSIPHASVLLLRKTSLDP*TQLESI Trigger: AATGCTCTCCAGCTGTGTGCATGGATCCAGGCTTGT...TTTTCGTAAAAGCAGCACAGATGCATGTGGTATGGAATTATAATTACAGAGAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026927.10 ENSMUST00000179748.8 |
||
| CDS-3UTR CCA 90 bp | ATTCCCAGAACTTTGGAGAGGCAGAGACAGACAGATGAATCGCTCGGAGTTCAATTCTGGTTTTACCAGTaGGATCCATATAAGTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: IPRTLERQRQTDESLGVQFWFYQ*DPYKLF Trigger: AAACAACTTATATGGATCCCACTGGTAAAACCAGAA...TTGAACTCCGAGCGATTCATCTGTCTGTCTCTGCCTCTCCAAAGTTCTGGGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026927.10 ENSMUST00000179748.8 |
||
| CDS-3UTR CCA 90 bp | GTGTGGTGCTACACATCTTTATTCCCAGAACTTTGGAGAGGCAGAGACAGACAGTTCTGGTTTTACCAGTaGGATCCATATAAGTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: VWCYTSLFPELWRGRDRQFWFYQ*DPYKLF Trigger: AAACAACTTATATGGATCCCACTGGTAAAACCAGAA...CTGTCTGTCTCTGCCTCTCCAAAGTTCTGGGAATAAAGATGTGTAGCACCACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026927.10 ENSMUST00000179748.8 |
||
| CDS-3UTR TCA 90 bp | TGTTCACTATTGAAGCATTATCTTGGTACACTTTTAGGAATGAAGTGGCCTTATATGTGTGGTGCAGTTTaGCAAGCCTGGATCCATGCA | + |
|
Preference number: 4 (lower is better) Translates to: CSLLKHYLGTLLGMKWPYMCGAV*QAWIHA Trigger: TGCATGGATCCAGGCTTGTCAAACTGCACCACACAT...ATAAGGCCACTTCATTCCTAAAAGTGTACCAAGATAATGCTTCAATAGTGAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026927.10 |
||
| CDS-3UTR GCA 90 bp | GGTTATATCCTCTCTGTAATTATAATTCCATACCACATGCATCTGTGCTGCTTTTGTAAGGTGTTGTTCTaGTCCCAAAGCGTCAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GYILSVIIIPYHMHLCCFCKVLF*SQSVKS Trigger: AGACTTGACGCTTTGGGAGCAGAACAACACCTTACA...AAAGCAGCACAGATGCATGTGGTATGGAATTATAATTACAGAGAGGATATAACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026927.10 ENSMUST00000179748.8 |
||
| 3UTR CAA 72 bp | GGAGCTAGGGTCCTTGGGAAACATTTTACTCTTCATTaGACACCACCCAGTTCTTTGTACATACTTTATTTT | + |
|
Preference number: 4 (lower is better) Translates to: GARVLGKHFTLH*TPPSSLYILYF Trigger: AAAATAAAGTATGTACAAAGAACTGGGTGGTGTCAAATGAAGAGTAAAATGTTTCCCAAGGACCCTAGCTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026927.10 |
||
| CDS GCA 90 bp | CCCATCGGGGGCCGGAACTGCTTCACCAGGATGACGCACTCATGGTaGAGGGTTCTTTGCAGCACAGGTATGACCGACACGGCATCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: PIGGRNCFTRMTHSW*RVLCSTGMTDTASA Trigger: TGCTGATGCCGTGTCGGTCATACCTGTGCTGCAAAGAACCCTGCACCATGAGTGCGTCATCCTGGTGAAGCAGTTCCGGCCCCCGATGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000026927.10 ENSMUST00000127116.7 ENSMUST00000179748.8 ENSMUST00000194933.2 |
||
| CDS-3UTR CAA 90 bp | GTCTGCAAAAGAAGTTCCAGGCTAGCCAGGGCTACATGGCGATACCCTGTCTTACCCCTGGTTTGGGTTTaGGCCTTACATTTCCTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: VCKRSSRLARATWRYPVLPLVWV*ALHFLH Trigger: ATGCAGGAAATGTAAGGCCAAAACCCAAACCAGGGG...TAAGACAGGGTATCGCCATGTAGCCCTGGCTAGCCTGGAACTTCTTTTGCAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026927.10 ENSMUST00000179748.8 |
||
| CDS TCA 90 bp | ATCATCTCCATTGATGGTCACTGTCACAACATGTGTGGTGCAGTTTaGCAAGCCTGGATCCATGCACACAGCTGGAGAGCATTCCGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: IISIDGHCHNMCGAV*QAWIHAHSWRAFRN Trigger: GTTGCGGAATGCTCTCCAGCTGTGTGCATGGATCCAGGCTTGTCAAACTGCACCACACATGTTGTGACAGTGACCATCAATGGAGATGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026927.10 ENSMUST00000127116.7 ENSMUST00000179748.8 |
||
| CDS-3UTR CAA 90 bp | AAAAGAAGTTCCAGGCTAGCCAGGGCTACATGGCGATACCCTGTCTTAAAACAACCCCTGGTTTGGGTTTaGGCCTTACATTTCCTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: KRSSRLARATWRYPVLKQPLVWV*ALHFLH Trigger: ATGCAGGAAATGTAAGGCCAAAACCCAAACCAGGGG...TTGTTTTAAGACAGGGTATCGCCATGTAGCCCTGGCTAGCCTGGAACTTCTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026927.10 ENSMUST00000179748.8 |
||
| CDS-3UTR CAA 90 bp | TACACATCTTTATTCCCAGAACTTTGGAGAGGCAGAGACAGACAGATGAATCGCCCTGCATCATCTCCATaGATGGTCACTGTCACAACA | + |
|
Preference number: 5 (lower is better) Translates to: YTSLFPELWRGRDRQMNRPASSP*MVTVTT Trigger: TGTTGTGACAGTGACCATCAATGGAGATGATGCAGG...GCGATTCATCTGTCTGTCTCTGCCTCTCCAAAGTTCTGGGAATAAAGATGTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026927.10 ENSMUST00000179748.8 |
||
| CDS-3UTR CAA 90 bp | TCCCTCAGTTTGTTGTTTTCAGTGCTCACTGTCCCATTTCTGAAGTGGGCACAGTCAGCAGATCATTCTTaGGTAAAGAAATCACTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SLSLLFSVLTVPFLKWAQSADHS*VKKSLP Trigger: TGGAAGTGATTTCTTTACCAAAGAATGATCTGCTGA...CTGTGCCCACTTCAGAAATGGGACAGTGAGCACTGAAAACAACAAACTGAGGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026927.10 |
||
| CDS-3UTR CAA 90 bp | TTGTTAAGGAACAGGCTGAAGTTGGTGGAATGGGTGCTTTGTTTTTCTAAATGTCCTGCATCATCTCCATaGATGGTCACTGTCACAACA | + |
|
Preference number: 5 (lower is better) Translates to: LLRNRLKLVEWVLCFSKCPASSP*MVTVTT Trigger: TGTTGTGACAGTGACCATCAATGGAGATGATGCAGG...ACATTTAGAAAAACAAAGCACCCATTCCACCAACTTCAGCCTGTTCCTTAACAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026927.10 |
||
| CDS-3UTR CAA 90 bp | TTTATTCCCAGAACTTTGGAGAGGCAGAGACAGACAGATGAATCGCTCGGAGTTTCAGCAGATCATTCTTaGGTAAAGAAATCACTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: FIPRTLERQRQTDESLGVSADHS*VKKSLP Trigger: TGGAAGTGATTTCTTTACCAAAGAATGATCTGCTGA...AACTCCGAGCGATTCATCTGTCTGTCTCTGCCTCTCCAAAGTTCTGGGAATAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026927.10 ENSMUST00000179748.8 |
||
| CDS-3UTR CAA 90 bp | TGTTCACTATTGAAGCATTATCTTGGTACACTTTTAGGAATGAAGTGGCCTTATTCTCCATCCCCTGGTTaGGGTTTTGGCCTTACATTT | + |
|
Preference number: 5 (lower is better) Translates to: CSLLKHYLGTLLGMKWPYSPSPG*GFGLTF Trigger: AAATGTAAGGCCAAAACCCAAACCAGGGGATGGAGA...ATAAGGCCACTTCATTCCTAAAAGTGTACCAAGATAATGCTTCAATAGTGAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026927.10 |
||
| CDS TCA 72 bp | AGCTGCCCATCGGGGGCCGGAACTGCTTCACCAGGATaGCGCACTCATGGTGCAGGGTTCTTTGCAGCACAG | + |
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Preference number: 6 (lower is better) Translates to: SCPSGAGTASPG*RTHGAGFFAAQ Trigger: CTGTGCTGCAAAGAACCCTGCACCATGAGTGCGTCATCCTGGTGAAGCAGTTCCGGCCCCCGATGGGCAGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000026927.10 ENSMUST00000127116.7 ENSMUST00000179748.8 ENSMUST00000194933.2 |
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| CDS GCA 72 bp | GGCCGGAACTGCTTCACCAGGATGACGCACTCATGGTaGAGGGTTCTTTGCAGCACAGGTATGACCGACACG | + |
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Preference number: 6 (lower is better) Translates to: GRNCFTRMTHSW*RVLCSTGMTDT Trigger: CGTGTCGGTCATACCTGTGCTGCAAAGAACCCTGCACCATGAGTGCGTCATCCTGGTGAAGCAGTTCCGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026927.10 ENSMUST00000127116.7 ENSMUST00000179748.8 ENSMUST00000194933.2 |
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| CDS TCA 72 bp | CGCACTCATGGTGCAGGGTTCTTTGCAGCACAGGTATaGCCGACACGGCATCAGCAGATTTTCCCTTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: RTHGAGFFAAQV*PTRHQQIFPSW Trigger: CCAGGAAGGGAAAATCTGCTGATGCCGTGTCGGTCATACCTGTGCTGCAAAGAACCCTGCACCATGAGTGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026927.10 ENSMUST00000127116.7 ENSMUST00000179748.8 ENSMUST00000194933.2 |
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| CDS GCA 72 bp | TTCACCAGGATGACGCACTCATGGTGCAGGGTTCTTTaGAGCACAGGTATGACCGACACGGCATCAGCAGAT | + |
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Preference number: 6 (lower is better) Translates to: FTRMTHSWCRVL*STGMTDTASAD Trigger: ATCTGCTGATGCCGTGTCGGTCATACCTGTGCTGCAAAGAACCCTGCACCATGAGTGCGTCATCCTGGTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026927.10 ENSMUST00000127116.7 ENSMUST00000179748.8 ENSMUST00000194933.2 |
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| CDS CAA 72 bp | ACCGTAGGCGTAGACCTTGGCATCCACTGTAAGGTGTaGTTCTGCTCCCAAAGCGTCAAGTCTTGTCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: TVGVDLGIHCKV*FCSQSVKSCQQ Trigger: CTGCTGACAAGACTTGACGCTTTGGGAGCAGAACAACACCTTACAGTGGATGCCAAGGTCTACGCCTACGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026927.10 ENSMUST00000179748.8 |
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| CDS CAA 90 bp | CAGAGCCAGACCGTAGGCGTAGACCTTGGCATCCACTGTAAGGTGTaGTTCTGCTCCCAAAGCGTCAAGTCTTGTCAGCAGATCATTCTT | + |
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Preference number: 6 (lower is better) Translates to: QSQTVGVDLGIHCKV*FCSQSVKSCQQIIL Trigger: AAGAATGATCTGCTGACAAGACTTGACGCTTTGGGAGCAGAACAACACCTTACAGTGGATGCCAAGGTCTACGCCTACGGTCTGGCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026927.10 ENSMUST00000179748.8 |
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| CDS TCA 72 bp | ATTGATGGTCACTGTCACAACATGTGTGGTGCAGTTTaGCAAGCCTGGATCCATGCACACAGCTGGAGAGCA | + |
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Preference number: 6 (lower is better) Translates to: IDGHCHNMCGAV*QAWIHAHSWRA Trigger: TGCTCTCCAGCTGTGTGCATGGATCCAGGCTTGTCAAACTGCACCACACATGTTGTGACAGTGACCATCAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026927.10 ENSMUST00000127116.7 ENSMUST00000179748.8 |
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| CDS GCA 72 bp | TTTCCTTCTGAGATCAACTCCTCTGAGGTAACAAGGTaGTTGCCTGGAGAAGACTCTGTGGATTCTCGGGTC | + |
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Preference number: 6 (lower is better) Translates to: FPSEINSSEVTR*LPGEDSVDSRV Trigger: GACCCGAGAATCCACAGAGTCTTCTCCAGGCAAGCACCTTGTTACCTCAGAGGAGTTGATCTCAGAAGGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026927.10 ENSMUST00000127116.7 ENSMUST00000179748.8 ENSMUST00000194933.2 |
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| CDS GCA 72 bp | GGCGTAGACCTTGGCATCCACTGTAAGGTGTTGTTCTaGTCCCAAAGCGTCAAGTCTTGTCAGCAGATCATT | + |
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Preference number: 6 (lower is better) Translates to: GVDLGIHCKVLF*SQSVKSCQQII Trigger: AATGATCTGCTGACAAGACTTGACGCTTTGGGAGCAGAACAACACCTTACAGTGGATGCCAAGGTCTACGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026927.10 ENSMUST00000179748.8 |
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