RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NUDT4 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000020029

Ensembl transcript IDs: ENSMUST00000020217.7

Found 31 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CGTGACATAATTCTGCCTGTGAACAAATTCTCAGAAACAGGAAGCTaGAGTGCTTTGTCAAAGGCTCCTGGCCCATACAAACACGGCCCA +
Preference number: 1 (lower is better)
Translates to: RDIILPVNKFSETGS*SALSKAPGPYKHGP
Trigger: TGGGCCGTGTTTGTATGGGCCAGGAGCCTTTGACAAAGCACTTCAGCTTCCTGTTTCTGAGAATTTGTTCACAGGCAGAATTATGTCACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020217.7
3UTR TCA 90 bp TCAAATCACTGTGGCAGAGGGGAACCGGTCCTAGTACATGGACCGTaGCATAATTCTGCCTGTGAACAAATTCTCAGAAACAGGAAGCTG +
Preference number: 1 (lower is better)
Translates to: SNHCGRGEPVLVHGP*HNSACEQILRNRKL
Trigger: CAGCTTCCTGTTTCTGAGAATTTGTTCACAGGCAGAATTATGTCACGGTCCATGTACTAGGACCGGTTCCCCTCTGCCACAGTGATTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020217.7
3UTR CCA 90 bp GCTGCTTCATACGGTGTGACTGACAACTGGATGGCTTGTCCTTGGTaGGAAAATGCCATTTCTTTACACCACCACCCAACAGTTTCTACT +
Preference number: 1 (lower is better)
Translates to: AASYGVTDNWMACPW*ENAISLHHHPTVST
Trigger: AGTAGAAACTGTTGGGTGGTGGTGTAAAGAAATGGCATTTTCCCACCAAGGACAAGCCATCCAGTTGTCAGTCACACCGTATGAAGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020217.7
3UTR TCA 90 bp ACACATACCCTTTTCTCTCCTTCACCTTTGCTGCTTCATACGGTGTaGCTGACAACTGGATGGCTTGTCCTTGGTGGGAAAATGCCATTT +
Preference number: 1 (lower is better)
Translates to: THTLFSPSPLLLHTV*LTTGWLVLGGKMPF
Trigger: AAATGGCATTTTCCCACCAAGGACAAGCCATCCAGTTGTCAGTCACACCGTATGAAGCAGCAAAGGTGAAGGAGAGAAAAGGGTATGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020217.7
3UTR CCA 90 bp TTTCTCTCCTTCACCTTTGCTGCTTCATACGGTGTGACTGACAACTaGATGGCTTGTCCTTGGTGGGAAAATGCCATTTCTTTACACCAC +
Preference number: 1 (lower is better)
Translates to: FLSFTFAASYGVTDN*MACPWWENAISLHH
Trigger: GTGGTGTAAAGAAATGGCATTTTCCCACCAAGGACAAGCCATCCAGTTGTCAGTCACACCGTATGAAGCAGCAAAGGTGAAGGAGAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020217.7
3UTR TCA 90 bp ATACCCTTTTCTCTCCTTCACCTTTGCTGCTTCATACGGTGTGACTaGCAACTGGATGGCTTGTCCTTGGTGGGAAAATGCCATTTCTTT +
Preference number: 1 (lower is better)
Translates to: IPFSLLHLCCFIRCD*QLDGLSLVGKCHFF
Trigger: AAAGAAATGGCATTTTCCCACCAAGGACAAGCCATCCAGTTGTCAGTCACACCGTATGAAGCAGCAAAGGTGAAGGAGAGAAAAGGGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020217.7
3UTR GCA 90 bp CATAATTCTGCCTGTGAACAAATTCTCAGAAACAGGAAGCTGAAGTaGTTTGTCAAAGGCTCCTGGCCCATACAAACACGGCCCAAATCT +
Preference number: 1 (lower is better)
Translates to: HNSACEQILRNRKLK*FVKGSWPIQTRPKS
Trigger: AGATTTGGGCCGTGTTTGTATGGGCCAGGAGCCTTTGACAAAGCACTTCAGCTTCCTGTTTCTGAGAATTTGTTCACAGGCAGAATTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020217.7
3UTR TCA 90 bp AGTTTCTCTGTTGTGTTTAGTACAGGGAAGAATTGCAGAGAATCGTaGGAAAACAAGATAGAGAATGACAATCTGTGGGTTTCTTTAAAA +
Preference number: 1 (lower is better)
Translates to: SFSVVFSTGKNCRES*ENKIENDNLWVSLK
Trigger: TTTTAAAGAAACCCACAGATTGTCATTCTCTATCTTGTTTTCTCACGATTCTCTGCAATTCTTCCCTGTACTAAACACAACAGAGAAACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020217.7
3UTR-3UTR CCA 90 bp CTGACAACTGGATGGCTTGTCCTTGGTGGGAAAATGCCATTTCTTTACACCACCGTTCTGCTGCATCGGTaGCCCAAGATCTCATTATGG +
Preference number: 2 (lower is better)
Translates to: LTTGWLVLGGKMPFLYTTVLLHR*PKISLW
Trigger: CCATAATGAGATCTTGGGCCACCGATGCAGCAGAAC...GGTGGTGTAAAGAAATGGCATTTTCCCACCAAGGACAAGCCATCCAGTTGTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020217.7
3UTR-3UTR TCA 90 bp CTGACAACTGGATGGCTTGTCCTTGGTGGGAAAATGCCATTTCTTTACACCACCACCCCCAAGCACTTGTaGTGGTTTATTTGCTGGAAG +
Preference number: 2 (lower is better)
Translates to: LTTGWLVLGGKMPFLYTTTPKHL*WFICWK
Trigger: CTTCCAGCAAATAAACCATCACAAGTGCTTGGGGGT...GGTGGTGTAAAGAAATGGCATTTTCCCACCAAGGACAAGCCATCCAGTTGTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000020217.7
3UTR-3UTR TCA 90 bp TTCCTTACAGGCAAGGACCCTTGTCAGCAGCACTATTACAGTTTAAAGGTTAACAAGAGCCTCTCCTTGTaGCATGTGCATCACATGATG +
Preference number: 2 (lower is better)
Translates to: FLTGKDPCQQHYYSLKVNKSLSL*HVHHMM
Trigger: CATCATGTGATGCACATGTCACAAGGAGAGGCTCTT...GTTAACCTTTAAACTGTAATAGTGCTGCTGACAAGGGTCCTTGCCTGTAAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020217.7
3UTR-3UTR TCA 90 bp CTTGGTGGGAAAATGCCATTTCTTTACACCACCACCCAACAGTTTCTACTTTTTTCAGAAACAGGAAGCTaGAGTGCTTTGTCAAAGGCT +
Preference number: 2 (lower is better)
Translates to: LGGKMPFLYTTTQQFLLFSETGS*SALSKA
Trigger: AGCCTTTGACAAAGCACTTCAGCTTCCTGTTTCTGA...AAAAAGTAGAAACTGTTGGGTGGTGGTGTAAAGAAATGGCATTTTCCCACCAAG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000020217.7
3UTR-3UTR TCA 90 bp CTTGGTGGGAAAATGCCATTTCTTTACACCACCACCCAACAGTTTCTACTTTTTCTGACCCAGGTGACATaGCTTAGTCCAAATGTTTCT +
Preference number: 2 (lower is better)
Translates to: LGGKMPFLYTTTQQFLLFLTQVT*LSPNVS
Trigger: AGAAACATTTGGACTAAGTCATGTCACCTGGGTCAG...AAAAAGTAGAAACTGTTGGGTGGTGGTGTAAAGAAATGGCATTTTCCCACCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000020217.7
3UTR-3UTR GCA 90 bp TTCCTTACAGGCAAGGACCCTTGTCAGCAGCACTATTACAGTTTAAAGGTTAACAACACGGCCCAAATCTaGAGTTTACAAAGGGAGAAT +
Preference number: 2 (lower is better)
Translates to: FLTGKDPCQQHYYSLKVNNTAQI*SLQREN
Trigger: ATTCTCCCTTTGTAAACTGCAGATTTGGGCCGTGTT...GTTAACCTTTAAACTGTAATAGTGCTGCTGACAAGGGTCCTTGCCTGTAAGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020217.7
3UTR-3UTR GCA 90 bp CTTGGTGGGAAAATGCCATTTCTTTACACCACCACCCAACAGTTTCTACTTTTTTCATTATGGAAACGGTaGCAGTTTTCCTTACAGGCA +
Preference number: 2 (lower is better)
Translates to: LGGKMPFLYTTTQQFLLFSLWKR*QFSLQA
Trigger: TGCCTGTAAGGAAAACTGGCACCGTTTCCATAATGA...AAAAAGTAGAAACTGTTGGGTGGTGGTGTAAAGAAATGGCATTTTCCCACCAAG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000020217.7
3UTR-3UTR TCA 90 bp CTTGGTGGGAAAATGCCATTTCTTTACACCACCACCCAACAGTTTCTACTTTTTTACCCAATAACCAGTTaGTCTGTCAAAACAAACCAT +
Preference number: 2 (lower is better)
Translates to: LGGKMPFLYTTTQQFLLFYPITS*SVKTNH
Trigger: ATGGTTTGTTTTGACAGATCAACTGGTTATTGGGTA...AAAAAGTAGAAACTGTTGGGTGGTGGTGTAAAGAAATGGCATTTTCCCACCAAG
39% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000020217.7
3UTR-3UTR CCA 90 bp CTTGGTGGGAAAATGCCATTTCTTTACACCACCACCCAACAGTTTCTACTTTTTAGGTACAATAATTCTTaGCTCGAATGTTCTAGTTTC +
Preference number: 2 (lower is better)
Translates to: LGGKMPFLYTTTQQFLLFRYNNS*LECSSF
Trigger: GAAACTAGAACATTCGAGCCAAGAATTATTGTACCT...AAAAAGTAGAAACTGTTGGGTGGTGGTGTAAAGAAATGGCATTTTCCCACCAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000020217.7
3UTR TCA 72 bp TCTCTCCTTCACCTTTGCTGCTTCATACGGTGTGACTaGCAACTGGATGGCTTGTCCTTGGTGGGAAAATGC +
Preference number: 3 (lower is better)
Translates to: SLLHLCCFIRCD*QLDGLSLVGKC
Trigger: GCATTTTCCCACCAAGGACAAGCCATCCAGTTGTCAGTCACACCGTATGAAGCAGCAAAGGTGAAGGAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020217.7
3UTR TCA 72 bp TGTGGCAGAGGGGAACCGGTCCTAGTACATGGACCGTaGCATAATTCTGCCTGTGAACAAATTCTCAGAAAC +
Preference number: 3 (lower is better)
Translates to: CGRGEPVLVHGP*HNSACEQILRN
Trigger: GTTTCTGAGAATTTGTTCACAGGCAGAATTATGTCACGGTCCATGTACTAGGACCGGTTCCCCTCTGCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020217.7
3UTR TCA 72 bp CTTTTCTCTCCTTCACCTTTGCTGCTTCATACGGTGTaGCTGACAACTGGATGGCTTGTCCTTGGTGGGAAA +
Preference number: 3 (lower is better)
Translates to: LFSPSPLLLHTV*LTTGWLVLGGK
Trigger: TTTCCCACCAAGGACAAGCCATCCAGTTGTCAGTCACACCGTATGAAGCAGCAAAGGTGAAGGAGAGAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020217.7
3UTR CCA 72 bp TCATACGGTGTGACTGACAACTGGATGGCTTGTCCTTaGTGGGAAAATGCCATTTCTTTACACCACCACCCA +
Preference number: 3 (lower is better)
Translates to: SYGVTDNWMACP*WENAISLHHHP
Trigger: TGGGTGGTGGTGTAAAGAAATGGCATTTTCCCACCAAGGACAAGCCATCCAGTTGTCAGTCACACCGTATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020217.7
3UTR CCA 72 bp TTCACCTTTGCTGCTTCATACGGTGTGACTGACAACTaGATGGCTTGTCCTTGGTGGGAAAATGCCATTTCT +
Preference number: 3 (lower is better)
Translates to: FTFAASYGVTDN*MACPWWENAIS
Trigger: AGAAATGGCATTTTCCCACCAAGGACAAGCCATCCAGTTGTCAGTCACACCGTATGAAGCAGCAAAGGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020217.7
3UTR-3UTR CAA 90 bp TTCCTTACAGGCAAGGACCCTTGTCAGCAGCACTATTACAGTTTAAAGGTTAACAAAGAGTACTCACCCTaGAGGGAAATGTGGCCCCTA +
Preference number: 3 (lower is better)
Translates to: FLTGKDPCQQHYYSLKVNKEYSP*REMWPL
Trigger: TAGGGGCCACATTTCCCTCAAGGGTGAGTACTCTTT...GTTAACCTTTAAACTGTAATAGTGCTGCTGACAAGGGTCCTTGCCTGTAAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020217.7
3UTR GCA 72 bp CAAAGGCTCCTGGCCCATACAAACACGGCCCAAATCTaGAGTTTACAAAGGGAGAATATGACTCTCTTTAAG +
Preference number: 3 (lower is better)
Translates to: QRLLAHTNTAQI*SLQRENMTLFK
Trigger: CTTAAAGAGAGTCATATTCTCCCTTTGTAAACTGCAGATTTGGGCCGTGTTTGTATGGGCCAGGAGCCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020217.7
3UTR TCA 72 bp ATTCTGCCTGTGAACAAATTCTCAGAAACAGGAAGCTaGAGTGCTTTGTCAAAGGCTCCTGGCCCATACAAA +
Preference number: 3 (lower is better)
Translates to: ILPVNKFSETGS*SALSKAPGPYK
Trigger: TTTGTATGGGCCAGGAGCCTTTGACAAAGCACTTCAGCTTCCTGTTTCTGAGAATTTGTTCACAGGCAGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020217.7
3UTR CCA 72 bp CTTTGGAATCTAATGCTTTTAGTTCTGCTGCATCGGTaGCCCAAGATCTCATTATGGAAACGGTGCCAGTTT +
Preference number: 3 (lower is better)
Translates to: LWNLMLLVLLHR*PKISLWKRCQF
Trigger: AAACTGGCACCGTTTCCATAATGAGATCTTGGGCCACCGATGCAGCAGAACTAAAAGCATTAGATTCCAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020217.7
3UTR TCA 72 bp ACACGGCCCAAATCTGCAGTTTACAAAGGGAGAATATaGCTCTCTTTAAGTTTTGGGGTGGATAGATTTCTT +
Preference number: 3 (lower is better)
Translates to: TRPKSAVYKGRI*LSLSFGVDRFL
Trigger: AAGAAATCTATCCACCCCAAAACTTAAAGAGAGTCATATTCTCCCTTTGTAAACTGCAGATTTGGGCCGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020217.7
3UTR TCA 72 bp GAGAGTATCGTGTACATACAAACCCCCAAGCACTTGTaGTGGTTTATTTGCTGGAAGCAGTATTCTATACAA +
Preference number: 3 (lower is better)
Translates to: ESIVYIQTPKHL*WFICWKQYSIQ
Trigger: TTGTATAGAATACTGCTTCCAGCAAATAAACCATCACAAGTGCTTGGGGGTTTGTATGTACACGATACTCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000020217.7
3UTR CCA 72 bp AATATATTTAAAGAGTACTCACCCTTGAGGGAAATGTaGCCCCTAATAGAGTCTATGTCAAAGAAGGGAAAT +
Preference number: 3 (lower is better)
Translates to: NIFKEYSPLREM*PLIESMSKKGN
Trigger: ATTTCCCTTCTTTGACATAGACTCTATTAGGGGCCACATTTCCCTCAAGGGTGAGTACTCTTTAAATATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020217.7
CDS-3UTR CCA 90 bp CTTGGTGGGAAAATGCCATTTCTTTACACCACCACCCAACAGTTTCTACTTTTTCTCCATCCCTCCTCCTaGGACAATCCATTGGTCTGG +
Preference number: 4 (lower is better)
Translates to: LGGKMPFLYTTTQQFLLFLHPSS*DNPLVW
Trigger: CCAGACCAATGGATTGTCCCAGGAGGAGGGATGGAG...AAAAAGTAGAAACTGTTGGGTGGTGGTGTAAAGAAATGGCATTTTCCCACCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000020217.7
CDS-3UTR CAA 90 bp TTTGTCAAAGGCTCCTGGCCCATACAAACACGGCCCAAATCTGCAGTTTACAAATCTGTGCTTCCGGTCTaGATTCTCAAATATTCCGAG +
Preference number: 5 (lower is better)
Translates to: FVKGSWPIQTRPKSAVYKSVLPV*ILKYSE
Trigger: CTCGGAATATTTGAGAATCAAGACCGGAAGCACAGA...TTTGTAAACTGCAGATTTGGGCCGTGTTTGTATGGGCCAGGAGCCTTTGACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020217.7