Pregenerated sensors for NUDT3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024213Ensembl transcript IDs: ENSMUST00000025050.13, ENSMUST00000062397.13, ENSMUST00000114886.8, ENSMUST00000146321.3, ENSMUST00000156429.9, ENSMUST00000231742.2
Found 95 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCTCCCGCCACAGCCCACAGCAGCACCTCAGTGTCCCCTCTCCACTaGCCGCCATGCCTGGGTGACAGAGAAGGCCGTGAGGTGAGGGGT | + |
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Preference number: 1 (lower is better) Translates to: PPATAHSSTSVSPLH*PPCLGDREGREVRG Trigger: ACCCCTCACCTCACGGCCTTCTCTGTCACCCAGGCATGGCGGGCAGTGGAGAGGGGACACTGAGGTGCTGCTGTGGGCTGTGGCGGGAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025050.13 ENSMUST00000114886.8 |
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| 3UTR TCA 90 bp | GCAGCCGCTCTTCACAAGTCCTCGGCAAGGCCGCACTGGCAGAGCTaGCTGCTGGGCCGCTGCAGGCTGTGGCGCTCCTTCCTCTTGCCT | + |
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Preference number: 1 (lower is better) Translates to: AAALHKSSARPHWQS*LLGRCRLWRSFLLP Trigger: AGGCAAGAGGAAGGAGCGCCACAGCCTGCAGCGGCCCAGCAGTCAGCTCTGCCAGTGCGGCCTTGCCGAGGACTTGTGAAGAGCGGCTGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146321.3 |
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| 3UTR GCA 90 bp | CCGCTCTTCACAAGTCCTCGGCAAGGCCGCACTGGCAGAGCTGACTaGTGGGCCGCTGCAGGCTGTGGCGCTCCTTCCTCTTGCCTTCCA | + |
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Preference number: 1 (lower is better) Translates to: PLFTSPRQGRTGRAD*WAAAGCGAPSSCLP Trigger: TGGAAGGCAAGAGGAAGGAGCGCCACAGCCTGCAGCGGCCCAGCAGTCAGCTCTGCCAGTGCGGCCTTGCCGAGGACTTGTGAAGAGCGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146321.3 |
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| 3UTR CCA 90 bp | CTCTTCACAAGTCCTCGGCAAGGCCGCACTGGCAGAGCTGACTGCTaGGCCGCTGCAGGCTGTGGCGCTCCTTCCTCTTGCCTTCCACTC | + |
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Preference number: 1 (lower is better) Translates to: LFTSPRQGRTGRADC*AAAGCGAPSSCLPL Trigger: GAGTGGAAGGCAAGAGGAAGGAGCGCCACAGCCTGCAGCGGCCCAGCAGTCAGCTCTGCCAGTGCGGCCTTGCCGAGGACTTGTGAAGAG 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146321.3 |
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| 3UTR TCA 90 bp | GGCCCTGTGAGCCGGGCAGGCAGTCAGGCTGGGCACAAGCTGCTGTaGGCCCAGATCTCTCCTCCAATAAGGAGACCTGAGGCAACCGTG | + |
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Preference number: 1 (lower is better) Translates to: GPVSRAGSQAGHKLL*AQISPPIRRPEATV Trigger: CACGGTTGCCTCAGGTCTCCTTATTGGAGGAGAGATCTGGGCTCACAGCAGCTTGTGCCCAGCCTGACTGCCTGCCCGGCTCACAGGGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146321.3 |
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| 3UTR TCA 90 bp | CTTCGGAACCCAAGAAGGAGAGGGAGGTGCCCTCTCAGGGCAGGGTaGGCGAGCGGGGAGGATCGGGCATGCAGGAAAGTGCTTGTGAGT | + |
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Preference number: 1 (lower is better) Translates to: LRNPRRRGRCPLRAG*ASGEDRACRKVLVS Trigger: ACTCACAAGCACTTTCCTGCATGCCCGATCCTCCCCGCTCGCTCACCCTGCCCTGAGAGGGCACCTCCCTCTCCTTCTTGGGTTCCGAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025050.13 |
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| 3UTR CCA 90 bp | AAGGCCAGGGTCCCAGGAGTGAGAGCAAGGTGGCCGGGCTCGGCATaGCTGGGAACAGAGGACAGGGAAGCCCGCCAAGTTACTAGCATT | + |
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Preference number: 1 (lower is better) Translates to: KARVPGVRARWPGSA*LGTEDREARQVTSI Trigger: AATGCTAGTAACTTGGCGGGCTTCCCTGTCCTCTGTTCCCAGCCATGCCGAGCCCGGCCACCTTGCTCTCACTCCTGGGACCCTGGCCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025050.13 ENSMUST00000231742.2 |
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| 3UTR TCA 90 bp | GCAGCTTCCACTAAGCCACATCCCAGCCCTCCAGTGCACACAGTATaGCCTCCCCAGCCATACTGTAGCCAGCACTGTCTCAGTGGCCAT | + |
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Preference number: 1 (lower is better) Translates to: AASTKPHPSPPVHTV*PPQPYCSQHCLSGH Trigger: ATGGCCACTGAGACAGTGCTGGCTACAGTATGGCTGGGGAGGTCATACTGTGTGCACTGGAGGGCTGGGATGTGGCTTAGTGGAAGCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146321.3 |
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| 3UTR GCA 90 bp | ATTCAGAGGAAATATCTGGCCAGGCCGGGACGAGACAAATGGGAGTaGTTCGGAACCCAAGAAGGAGAGGGAGGTGCCCTCTCAGGGCAG | + |
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Preference number: 1 (lower is better) Translates to: IQRKYLARPGRDKWE*FGTQEGEGGALSGQ Trigger: CTGCCCTGAGAGGGCACCTCCCTCTCCTTCTTGGGTTCCGAAGCACTCCCATTTGTCTCGTCCCGGCCTGGCCAGATATTTCCTCTGAAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025050.13 |
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| 3UTR TCA 90 bp | CTGTCTCAGTGGCCATGGCAACAGGTCTCCCCTCCGCAATGTAACTaGGAACGAGCTTCCCCAAGCAGCTGCCTCCTCTTAGCACTGACA | + |
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Preference number: 1 (lower is better) Translates to: LSQWPWQQVSPPQCN*ERASPSSCLLLALT Trigger: TGTCAGTGCTAAGAGGAGGCAGCTGCTTGGGGAAGCTCGTTCTCAGTTACATTGCGGAGGGGAGACCTGTTGCCATGGCCACTGAGACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146321.3 |
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| 3UTR GCA 90 bp | ATGCTAGGGAAGCAGCTTCCACTAAGCCACATCCCAGCCCTCCAGTaGACACAGTATGACCTCCCCAGCCATACTGTAGCCAGCACTGTC | + |
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Preference number: 1 (lower is better) Translates to: MLGKQLPLSHIPALQ*TQYDLPSHTVASTV Trigger: GACAGTGCTGGCTACAGTATGGCTGGGGAGGTCATACTGTGTGCACTGGAGGGCTGGGATGTGGCTTAGTGGAAGCTGCTTCCCTAGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146321.3 |
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| 3UTR GCA 90 bp | TTGACAGCTTCCTCCTGCAGGGAATGGGGACAAACGCTGTCGCGTTaGAGCACTGTAGCTGTGAGTGTTGTCTTTCAGGGTGACGAGGAC | + |
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Preference number: 1 (lower is better) Translates to: LTASSCREWGQTLSR*STVAVSVVFQGDED Trigger: GTCCTCGTCACCCTGAAAGACAACACTCACAGCTACAGTGCTGCAACGCGACAGCGTTTGTCCCCATTCCCTGCAGGAGGAAGCTGTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146321.3 |
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| 3UTR GCA 90 bp | AGCAGGCAGGTCTCTGCAGCTCAGGCTGCCTCTAACTCTCTCTGCTaGCTCCATTTCTTAGTGCTGGAATTACAGGCCTGTACCATGATC | + |
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Preference number: 1 (lower is better) Translates to: SRQVSAAQAASNSLC*LHFLVLELQACTMI Trigger: GATCATGGTACAGGCCTGTAATTCCAGCACTAAGAAATGGAGGCAGCAGAGAGAGTTAGAGGCAGCCTGAGCTGCAGAGACCTGCCTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146321.3 |
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| 3UTR TCA 90 bp | AGAAGTCACAAAGGCCTGACAGGTTTCACTAGACACCACCACTATTaGCAGCTTCCTCCTGCAGGGAATGGGGACAAACGCTGTCGCGTT | + |
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Preference number: 1 (lower is better) Translates to: RSHKGLTGFTRHHHY*QLPPAGNGDKRCRV Trigger: AACGCGACAGCGTTTGTCCCCATTCCCTGCAGGAGGAAGCTGTCAATAGTGGTGGTGTCTAGTGAAACCTGTCAGGCCTTTGTGACTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146321.3 |
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| 3UTR GCA 90 bp | AATAGCAGGCAGGTCTCTGCAGCTCAGGCTGCCTCTAACTCTCTCTaGTGCCTCCATTTCTTAGTGCTGGAATTACAGGCCTGTACCATG | + |
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Preference number: 1 (lower is better) Translates to: NSRQVSAAQAASNSL*CLHFLVLELQACTM Trigger: CATGGTACAGGCCTGTAATTCCAGCACTAAGAAATGGAGGCAGCAGAGAGAGTTAGAGGCAGCCTGAGCTGCAGAGACCTGCCTGCTATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146321.3 |
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| 3UTR TCA 90 bp | ACCAGAGGTGATGTTGGAGGAGAGCCACAAGAAGTCACAAAGGCCTaGCAGGTTTCACTAGACACCACCACTATTGACAGCTTCCTCCTG | + |
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Preference number: 1 (lower is better) Translates to: TRGDVGGEPQEVTKA*QVSLDTTTIDSFLL Trigger: CAGGAGGAAGCTGTCAATAGTGGTGGTGTCTAGTGAAACCTGTCAGGCCTTTGTGACTTCTTGTGGCTCTCCTCCAACATCACCTCTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146321.3 |
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| 3UTR TCA 90 bp | AGAACGAGCTTCCCCAAGCAGCTGCCTCCTCTTAGCACTGACATTTaGTCTGTGACAAGTACCAGAGGTGATGTTGGAGGAGAGCCACAA | + |
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Preference number: 1 (lower is better) Translates to: RTSFPKQLPPLSTDI*SVTSTRGDVGGEPQ Trigger: TTGTGGCTCTCCTCCAACATCACCTCTGGTACTTGTCACAGATCAAATGTCAGTGCTAAGAGGAGGCAGCTGCTTGGGGAAGCTCGTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146321.3 |
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| 3UTR-3UTR GCA 90 bp | CACCCTGCCACACCCACCCGCCTCCCGCCACAGCCCACAGCAGCACCTCAGTGTCTCCACTGCCCGCCATaGCTGGGTGACAGAGAAGGC | + |
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Preference number: 2 (lower is better) Translates to: HPATPTRLPPQPTAAPQCLHCPP*LGDREG Trigger: GCCTTCTCTGTCACCCAGGCATGGCGGGCAGTGGAG...ACACTGAGGTGCTGCTGTGGGCTGTGGCGGGAGGCGGGTGGGTGTGGCAGGGTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025050.13 ENSMUST00000114886.8 |
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| 3UTR-3UTR GCA 90 bp | CCAGAGGGTCACCGGTGGGCCCCTCTTCCAGATGACCTCTCACACCGAGCAGACCTCCACTGCCCGCCATaGCTGGGTGACAGAGAAGGC | + |
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Preference number: 2 (lower is better) Translates to: PEGHRWAPLPDDLSHRADLHCPP*LGDREG Trigger: GCCTTCTCTGTCACCCAGGCATGGCGGGCAGTGGAG...GTCTGCTCGGTGTGAGAGGTCATCTGGAAGAGGGGCCCACCGGTGACCCTCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025050.13 |
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| 3UTR-3UTR CCA 90 bp | AGAGTCCCAAGCACCCACGCTAAGCCAGGCCTAGCTCCCCTCTTGCCCTCCTTGTGGCCGGGCTCGGCATaGCTGGGAACAGAGGACAGG | + |
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Preference number: 2 (lower is better) Translates to: RVPSTHAKPGLAPLLPSLWPGSA*LGTEDR Trigger: CCTGTCCTCTGTTCCCAGCCATGCCGAGCCCGGCCA...CAAGGAGGGCAAGAGGGGAGCTAGGCCTGGCTTAGCGTGGGTGCTTGGGACTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025050.13 ENSMUST00000231742.2 |
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| 3UTR-3UTR CCA 90 bp | GAGCCGGGCAGGCAGTCAGGCTGGGCACAAGCTGCTGTGAGCCCAGATCTCTCCCTGTCTCAGTGGCCATaGCAACAGGTCTCCCCTCCG | + |
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Preference number: 2 (lower is better) Translates to: EPGRQSGWAQAAVSPDLSLSQWP*QQVSPP Trigger: CGGAGGGGAGACCTGTTGCCATGGCCACTGAGACAG...GGAGAGATCTGGGCTCACAGCAGCTTGTGCCCAGCCTGACTGCCTGCCCGGCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146321.3 |
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| 3UTR-3UTR CCA 90 bp | AGCCAAAGGACAGTAGGACGACAAGGGAGGCTGAAGTGGGCATGGCCACCGCCCGGCCGCTGCAGGCTGTaGCGCTCCTTCCTCTTGCCT | + |
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Preference number: 2 (lower is better) Translates to: SQRTVGRQGRLKWAWPPPGRCRL*RSFLLP Trigger: AGGCAAGAGGAAGGAGCGCCACAGCCTGCAGCGGCC...GGGCGGTGGCCATGCCCACTTCAGCCTCCCTTGTCGTCCTACTGTCCTTTGGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146321.3 |
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| 3UTR-3UTR TCA 90 bp | CCAATAAGGAGACCTGAGGCAACCGTGCAGCCCCTGTGCTTGCCGAGGGTGAGAGACGACAAGGGAGGCTaGAGTGGGCATGGCCACCGC | + |
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Preference number: 2 (lower is better) Translates to: PIRRPEATVQPLCLPRVRDDKGG*SGHGHR Trigger: GCGGTGGCCATGCCCACTTCAGCCTCCCTTGTCGTC...TCTCACCCTCGGCAAGCACAGGGGCTGCACGGTTGCCTCAGGTCTCCTTATTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146321.3 |
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| 3UTR-3UTR GCA 90 bp | CACCCTGCCACACCCACCCGCCTCCCGCCACAGCCCACAGCAGCACCTCAGTGTAGCCATGCTTCAGTCTaGTTTCCACTCTCCGGCTCT | + |
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Preference number: 2 (lower is better) Translates to: HPATPTRLPPQPTAAPQCSHASV*FPLSGS Trigger: AGAGCCGGAGAGTGGAAAGCAGACTGAAGCATGGCT...ACACTGAGGTGCTGCTGTGGGCTGTGGCGGGAGGCGGGTGGGTGTGGCAGGGTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025050.13 ENSMUST00000114886.8 |
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| 3UTR CAA 90 bp | CAAAGAGTCCCAAGCACCCACGCTAAGCCAGGCCTAGCTCCCCTCTaGCCCTCCTTGCTCAAGGCCCCTCCCAGGACCCTTTACTTCCCG | + |
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Preference number: 2 (lower is better) Translates to: QRVPSTHAKPGLAPL*PSLLKAPPRTLYFP Trigger: CGGGAAGTAAAGGGTCCTGGGAGGGGCCTTGAGCAAGGAGGGCAAGAGGGGAGCTAGGCCTGGCTTAGCGTGGGTGCTTGGGACTCTTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025050.13 ENSMUST00000231742.2 |
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| 3UTR-3UTR TCA 90 bp | CCAATAAGGAGACCTGAGGCAACCGTGCAGCCCCTGTGCTTGCCGAGGGTGAGACACCACTCCAGGGTCTaGGATGGGGACAGCAGCACC | + |
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Preference number: 2 (lower is better) Translates to: PIRRPEATVQPLCLPRVRHHSRV*DGDSST Trigger: GGTGCTGCTGTCCCCATCTCAGACCCTGGAGTGGTG...TCTCACCCTCGGCAAGCACAGGGGCTGCACGGTTGCCTCAGGTCTCCTTATTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146321.3 |
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| 3UTR-3UTR GCA 90 bp | GAGCCGGGCAGGCAGTCAGGCTGGGCACAAGCTGCTGTGAGCCCAGATCTCTCCGCTTCCCCAAGCAGCTaGCTCCTCTTAGCACTGACA | + |
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Preference number: 2 (lower is better) Translates to: EPGRQSGWAQAAVSPDLSASPSS*LLLALT Trigger: TGTCAGTGCTAAGAGGAGGCAGCTGCTTGGGGAAGC...GGAGAGATCTGGGCTCACAGCAGCTTGTGCCCAGCCTGACTGCCTGCCCGGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146321.3 |
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| 3UTR-3UTR TCA 90 bp | CCATTCGGAGACAGACAACAGCCAAAGGACAGTAGGACGACAAGGGAGGCTGAACCGCACTGGCAGAGCTaGCTGCTGGGCCGCTGCAGG | + |
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Preference number: 2 (lower is better) Translates to: PFGDRQQPKDSRTTREAEPHWQS*LLGRCR Trigger: CCTGCAGCGGCCCAGCAGTCAGCTCTGCCAGTGCGG...TTCAGCCTCCCTTGTCGTCCTACTGTCCTTTGGCTGTTGTCTGTCTCCGAATGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146321.3 |
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| 3UTR-3UTR GCA 90 bp | AAGCAGCCGCTCTTCACAAGTCCTCGGCAAGGCCGCACTGGCAGAGCTGACTGCATCCCAGCCCTCCAGTaGACACAGTATGACCTCCCC | + |
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Preference number: 2 (lower is better) Translates to: KQPLFTSPRQGRTGRADCIPALQ*TQYDLP Trigger: GGGGAGGTCATACTGTGTGCACTGGAGGGCTGGGAT...GCAGTCAGCTCTGCCAGTGCGGCCTTGCCGAGGACTTGTGAAGAGCGGCTGCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146321.3 |
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| 3UTR-3UTR TCA 90 bp | GCCTACTGTGAGCCTATCGGACAGAATTCAGTTTCTCTCACTGTTTTCCAGGCTCCTCTCAGGGCAGGGTaGGCGAGCGGGGAGGATCGG | + |
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Preference number: 2 (lower is better) Translates to: AYCEPIGQNSVSLTVFQAPLRAG*ASGEDR Trigger: CCGATCCTCCCCGCTCGCTCACCCTGCCCTGAGAGG...AGCCTGGAAAACAGTGAGAGAAACTGAATTCTGTCCGATAGGCTCACAGTAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025050.13 |
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| 3UTR-3UTR GCA 90 bp | AGGAGACCTGAGGCAACCGTGCAGCCCCTGTGCTTGCCGAGGGTGAGATGGGACGCCTCTAACTCTCTCTaGTGCCTCCATTTCTTAGTG | + |
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Preference number: 2 (lower is better) Translates to: RRPEATVQPLCLPRVRWDASNSL*CLHFLV Trigger: CACTAAGAAATGGAGGCAGCAGAGAGAGTTAGAGGC...GTCCCATCTCACCCTCGGCAAGCACAGGGGCTGCACGGTTGCCTCAGGTCTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146321.3 |
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| 3UTR-3UTR TCA 90 bp | CTAAGCCACATCCCAGCCCTCCAGTGCACACAGTATGACCTCCCCAGCCATACTAGACACCACCACTATTaGCAGCTTCCTCCTGCAGGG | + |
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Preference number: 2 (lower is better) Translates to: LSHIPALQCTQYDLPSHTRHHHY*QLPPAG Trigger: CCCTGCAGGAGGAAGCTGTCAATAGTGGTGGTGTCT...AGTATGGCTGGGGAGGTCATACTGTGTGCACTGGAGGGCTGGGATGTGGCTTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146321.3 |
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| 3UTR-3UTR GCA 90 bp | CTCTATAAAATACCAACCGGAGCCAGAGGGTCACCGGTGGGCCCCTCTTCCAGAGTGGGGACAGGACTATaGAGAATGGCTGCAGAGCGT | + |
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Preference number: 2 (lower is better) Translates to: LYKIPTGARGSPVGPSSRVGTGL*RMAAER Trigger: ACGCTCTGCAGCCATTCTGCATAGTCCTGTCCCCAC...TCTGGAAGAGGGGCCCACCGGTGACCCTCTGGCTCCGGTTGGTATTTTATAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025050.13 ENSMUST00000231742.2 |
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| 3UTR-3UTR TCA 90 bp | CCAGAGGGTCACCGGTGGGCCCCTCTTCCAGATGACCTCTCACACCGAGCAGACAGCATTAAACAAATGTaGAGAGTGAGGGGCTTCAAA | + |
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Preference number: 2 (lower is better) Translates to: PEGHRWAPLPDDLSHRADSIKQM*RVRGFK Trigger: TTTGAAGCCCCTCACTCTTCACATTTGTTTAATGCT...GTCTGCTCGGTGTGAGAGGTCATCTGGAAGAGGGGCCCACCGGTGACCCTCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025050.13 ENSMUST00000231742.2 |
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| 3UTR-3UTR CCA 90 bp | TACTGTGAGCCTATCGGACAGAATTCAGTTTCTCTCACTGTTTTCCAGGCTTCGCGGGCTCGGCATGGCTaGGAACAGAGGACAGGGAAG | + |
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Preference number: 2 (lower is better) Translates to: YCEPIGQNSVSLTVFQASRARHG*EQRTGK Trigger: CTTCCCTGTCCTCTGTTCCCAGCCATGCCGAGCCCG...CGAAGCCTGGAAAACAGTGAGAGAAACTGAATTCTGTCCGATAGGCTCACAGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025050.13 ENSMUST00000231742.2 |
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| 3UTR-3UTR TCA 90 bp | CCCTCTTGCCCTCCTTGCTCAAGGCCCCTCCCAGGACCCTTTACTTCCCGACTAAAAAACCCAAAACTTTaGGAACCTGAACAGTTGAGC | + |
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Preference number: 2 (lower is better) Translates to: PSCPPCSRPLPGPFTSRLKNPKL*EPEQLS Trigger: GCTCAACTGTTCAGGTTCTCAAAGTTTTGGGTTTTT...TAGTCGGGAAGTAAAGGGTCCTGGGAGGGGCCTTGAGCAAGGAGGGCAAGAGGG 52% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000025050.13 ENSMUST00000231742.2 |
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| 3UTR-3UTR CCA 90 bp | GTAAGAGAGGCTATGTCAGCAATAAATAGCATTACAGAAAGAATCTCCAGCCAGTGGCCGGGCTCGGCATaGCTGGGAACAGAGGACAGG | + |
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Preference number: 2 (lower is better) Translates to: VREAMSAINSITERISSQWPGSA*LGTEDR Trigger: CCTGTCCTCTGTTCCCAGCCATGCCGAGCCCGGCCA...CTGGCTGGAGATTCTTTCTGTAATGCTATTTATTGCTGACATAGCCTCTCTTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025050.13 ENSMUST00000231742.2 |
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| 3UTR-3UTR CCA 90 bp | TGCTGGGATTATGGGTATGAAACACTACATCAGCTGATAACTCTGAAGAGGCTCCCAGCACTGTCTCAGTaGCCATGGCAACAGGTCTCC | + |
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Preference number: 2 (lower is better) Translates to: CWDYGYETLHQLITLKRLPALSQ*PWQQVS Trigger: GGAGACCTGTTGCCATGGCCACTGAGACAGTGCTGG...GAGCCTCTTCAGAGTTATCAGCTGATGTAGTGTTTCATACCCATAATCCCAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146321.3 |
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| 3UTR-3UTR TCA 90 bp | CCATTCGGAGACAGACAACAGCCAAAGGACAGTAGGACGACAAGGGAGGCTGAACTTAGCACTGACATTTaGTCTGTGACAAGTACCAGA | + |
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Preference number: 2 (lower is better) Translates to: PFGDRQQPKDSRTTREAELSTDI*SVTSTR Trigger: TCTGGTACTTGTCACAGATCAAATGTCAGTGCTAAG...TTCAGCCTCCCTTGTCGTCCTACTGTCCTTTGGCTGTTGTCTGTCTCCGAATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146321.3 |
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| 3UTR-3UTR GCA 90 bp | TACTGTGAGCCTATCGGACAGAATTCAGTTTCTCTCACTGTTTTCCAGGCTTCGAGCCATGCTTCAGTCTaGTTTCCACTCTCCGGCTCT | + |
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Preference number: 2 (lower is better) Translates to: YCEPIGQNSVSLTVFQASSHASV*FPLSGS Trigger: AGAGCCGGAGAGTGGAAAGCAGACTGAAGCATGGCT...CGAAGCCTGGAAAACAGTGAGAGAAACTGAATTCTGTCCGATAGGCTCACAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025050.13 |
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| 3UTR-3UTR CCA 90 bp | TGCTGGGATTATGGGTATGAAACACTACATCAGCTGATAACTCTGAAGAGGCTCCTTGCCTTCCACTCTTaGCCTCTCTCCCTTAGACCA | + |
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Preference number: 2 (lower is better) Translates to: CWDYGYETLHQLITLKRLLAFHS*PLSLRP Trigger: TGGTCTAAGGGAGAGAGGCCAAGAGTGGAAGGCAAG...GAGCCTCTTCAGAGTTATCAGCTGATGTAGTGTTTCATACCCATAATCCCAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146321.3 |
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| 3UTR-3UTR CCA 90 bp | CATATAAGGGTAAGAGAGGCTATGTCAGCAATAAATAGCATTACAGAAAGAATCTTCAGAGGAAATATCTaGCCAGGCCGGGACGAGACA | + |
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Preference number: 2 (lower is better) Translates to: HIRVREAMSAINSITERIFRGNI*PGRDET Trigger: TGTCTCGTCCCGGCCTGGCCAGATATTTCCTCTGAA...GATTCTTTCTGTAATGCTATTTATTGCTGACATAGCCTCTCTTACCCTTATATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025050.13 |
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| 3UTR-3UTR TCA 90 bp | TCAGCAATAAATAGCATTACAGAAAGAATCTCCAGCCAGCAGGACAGACACAGTAGCATTAAACAAATGTaGAGAGTGAGGGGCTTCAAA | + |
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Preference number: 2 (lower is better) Translates to: SAINSITERISSQQDRHSSIKQM*RVRGFK Trigger: TTTGAAGCCCCTCACTCTTCACATTTGTTTAATGCT...ACTGTGTCTGTCCTGCTGGCTGGAGATTCTTTCTGTAATGCTATTTATTGCTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025050.13 ENSMUST00000231742.2 |
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| 3UTR CCA 72 bp | AGTCCTCGGCAAGGCCGCACTGGCAGAGCTGACTGCTaGGCCGCTGCAGGCTGTGGCGCTCCTTCCTCTTGC | + |
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Preference number: 3 (lower is better) Translates to: SPRQGRTGRADC*AAAGCGAPSSC Trigger: GCAAGAGGAAGGAGCGCCACAGCCTGCAGCGGCCCAGCAGTCAGCTCTGCCAGTGCGGCCTTGCCGAGGACT 68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146321.3 |
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| 3UTR GCA 72 bp | ACAAGTCCTCGGCAAGGCCGCACTGGCAGAGCTGACTaGTGGGCCGCTGCAGGCTGTGGCGCTCCTTCCTCT | + |
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Preference number: 3 (lower is better) Translates to: TSPRQGRTGRAD*WAAAGCGAPSS Trigger: AGAGGAAGGAGCGCCACAGCCTGCAGCGGCCCAGCAGTCAGCTCTGCCAGTGCGGCCTTGCCGAGGACTTGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146321.3 |
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| 3UTR CCA 72 bp | AGGACAGTAGGACGACAAGGGAGGCTGAAGTGGGCATaGCCACCGCCCACAGGCGTCACGGTCCCCTACGGC | + |
|
Preference number: 3 (lower is better) Translates to: RTVGRQGRLKWA*PPPTGVTVPYG Trigger: GCCGTAGGGGACCGTGACGCCTGTGGGCGGTGGCCATGCCCACTTCAGCCTCCCTTGTCGTCCTACTGTCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146321.3 |
||
| 3UTR CCA 72 bp | CACAGCAGGCCCTGTGAGCCGGGCAGGCAGTCAGGCTaGGCACAAGCTGCTGTGAGCCCAGATCTCTCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: HSRPCEPGRQSG*AQAAVSPDLSS Trigger: GGAGGAGAGATCTGGGCTCACAGCAGCTTGTGCCCAGCCTGACTGCCTGCCCGGCTCACAGGGCCTGCTGTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146321.3 |
||
| 3UTR TCA 72 bp | AGAGGCTCGGAAAGCCAAGCTACACAGCAGGCCCTGTaGGCCGGGCAGGCAGTCAGGCTGGGCACAAGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: RGSESQATQQAL*AGQAVRLGTSC Trigger: GCAGCTTGTGCCCAGCCTGACTGCCTGCCCGGCTCACAGGGCCTGCTGTGTAGCTTGGCTTTCCGAGCCTCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146321.3 |
||
| 3UTR GCA 72 bp | ACAGCCCACAGCAGCACCTCAGTGTCCCCTCTCCACTaGCCGCCATGCCTGGGTGACAGAGAAGGCCGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: TAHSSTSVSPLH*PPCLGDREGRE Trigger: CTCACGGCCTTCTCTGTCACCCAGGCATGGCGGGCAGTGGAGAGGGGACACTGAGGTGCTGCTGTGGGCTGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025050.13 ENSMUST00000114886.8 |
||
| 3UTR GCA 72 bp | CCAATAAGGAGACCTGAGGCAACCGTGCAGCCCCTGTaGTTGCCGAGGGTGAGATGGGACAGGGAGGGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: PIRRPEATVQPL*LPRVRWDREGQ Trigger: CTGCCCCTCCCTGTCCCATCTCACCCTCGGCAAGCACAGGGGCTGCACGGTTGCCTCAGGTCTCCTTATTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146321.3 |
||
| 3UTR-3UTR CAA 90 bp | GGGCCGCTGCAGGCTGTGGCGCTCCTTCCTCTTGCCTTCCACTCTTGGCCTCTCGTACCAGAGGTGATGTaGGAGGAGAGCCACAAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: GPLQAVALLPLAFHSWPLVPEVM*EESHKK Trigger: CTTCTTGTGGCTCTCCTCCAACATCACCTCTGGTAC...GAGAGGCCAAGAGTGGAAGGCAAGAGGAAGGAGCGCCACAGCCTGCAGCGGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146321.3 |
||
| 3UTR-3UTR CAA 90 bp | GAGCCGGGCAGGCAGTCAGGCTGGGCACAAGCTGCTGTGAGCCCAGATCTCTCCCACAAACTGCACAAATaGGGCCACAGCCTAGTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: EPGRQSGWAQAAVSPDLSHKLHK*GHSLVP Trigger: TGGGACTAGGCTGTGGCCCAATTTGTGCAGTTTGTG...GGAGAGATCTGGGCTCACAGCAGCTTGTGCCCAGCCTGACTGCCTGCCCGGCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146321.3 |
||
| 3UTR TCA 72 bp | AGCCGGGCAGGCAGTCAGGCTGGGCACAAGCTGCTGTaGGCCCAGATCTCTCCTCCAATAAGGAGACCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: SRAGSQAGHKLL*AQISPPIRRPE Trigger: CTCAGGTCTCCTTATTGGAGGAGAGATCTGGGCTCACAGCAGCTTGTGCCCAGCCTGACTGCCTGCCCGGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146321.3 |
||
| 3UTR CCA 72 bp | CGTGGGGACAGGACTATGCAGAATGGCTGCAGAGCGTaGGGCCACAGCCAGGTCAGCATGGTGGAAGGCATA | + |
|
Preference number: 3 (lower is better) Translates to: RGDRTMQNGCRA*GHSQVSMVEGI Trigger: TATGCCTTCCACCATGCTGACCTGGCTGTGGCCCCACGCTCTGCAGCCATTCTGCATAGTCCTGTCCCCACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025050.13 ENSMUST00000231742.2 |
||
| 3UTR TCA 72 bp | GGAGCCAGAGGGTCACCGGTGGGCCCCTCTTCCAGATaGCCTCTCACACCGAGCAGACAGAAAGCTAATGTC | + |
|
Preference number: 3 (lower is better) Translates to: GARGSPVGPSSR*PLTPSRQKANV Trigger: GACATTAGCTTTCTGTCTGCTCGGTGTGAGAGGTCATCTGGAAGAGGGGCCCACCGGTGACCCTCTGGCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025050.13 ENSMUST00000231742.2 |
||
| 3UTR TCA 72 bp | CGAGCGGGGAGGATCGGGCATGCAGGAAAGTGCTTGTaGGTTACACCCAGCCCCACCCTCAGGAAGAGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: RAGRIGHAGKCL*VTPSPTLRKRK Trigger: TTTTCTCTTCCTGAGGGTGGGGCTGGGTGTAACTCACAAGCACTTTCCTGCATGCCCGATCCTCCCCGCTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025050.13 |
||
| 3UTR GCA 72 bp | AAATATCTGGCCAGGCCGGGACGAGACAAATGGGAGTaGTTCGGAACCCAAGAAGGAGAGGGAGGTGCCCTC | + |
|
Preference number: 3 (lower is better) Translates to: KYLARPGRDKWE*FGTQEGEGGAL Trigger: GAGGGCACCTCCCTCTCCTTCTTGGGTTCCGAAGCACTCCCATTTGTCTCGTCCCGGCCTGGCCAGATATTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025050.13 |
||
| 3UTR TCA 72 bp | ACTAAGCCACATCCCAGCCCTCCAGTGCACACAGTATaGCCTCCCCAGCCATACTGTAGCCAGCACTGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: TKPHPSPPVHTV*PPQPYCSQHCL Trigger: GAGACAGTGCTGGCTACAGTATGGCTGGGGAGGTCATACTGTGTGCACTGGAGGGCTGGGATGTGGCTTAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146321.3 |
||
| 3UTR GCA 72 bp | AAGCAGCTTCCACTAAGCCACATCCCAGCCCTCCAGTaGACACAGTATGACCTCCCCAGCCATACTGTAGCC | + |
|
Preference number: 3 (lower is better) Translates to: KQLPLSHIPALQ*TQYDLPSHTVA Trigger: GGCTACAGTATGGCTGGGGAGGTCATACTGTGTGCACTGGAGGGCTGGGATGTGGCTTAGTGGAAGCTGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146321.3 |
||
| 3UTR CCA 72 bp | CAGAGGAAATATCTGGCCAGGCCGGGACGAGACAAATaGGAGTGCTTCGGAACCCAAGAAGGAGAGGGAGGT | + |
|
Preference number: 3 (lower is better) Translates to: QRKYLARPGRDK*ECFGTQEGEGG Trigger: ACCTCCCTCTCCTTCTTGGGTTCCGAAGCACTCCCATTTGTCTCGTCCCGGCCTGGCCAGATATTTCCTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025050.13 |
||
| 3UTR CCA 72 bp | ACACCACCACTATTGACAGCTTCCTCCTGCAGGGAATaGGGACAAACGCTGTCGCGTTGCAGCACTGTAGCT | + |
|
Preference number: 3 (lower is better) Translates to: TPPLLTASSCRE*GQTLSRCSTVA Trigger: AGCTACAGTGCTGCAACGCGACAGCGTTTGTCCCCATTCCCTGCAGGAGGAAGCTGTCAATAGTGGTGGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146321.3 |
||
| 3UTR GCA 72 bp | TCTCCAGCCAGCAGGACAGACACAGTGCCCGGTTTCTaGGACATTGAGGGTGACAGTTTAAAGCCTACTGTG | + |
|
Preference number: 3 (lower is better) Translates to: SPASRTDTVPGF*DIEGDSLKPTV Trigger: CACAGTAGGCTTTAAACTGTCACCCTCAATGTCGCAGAAACCGGGCACTGTGTCTGTCCTGCTGGCTGGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025050.13 ENSMUST00000231742.2 |
||
| 3UTR GCA 72 bp | CAGGTCTCTGCAGCTCAGGCTGCCTCTAACTCTCTCTaGTGCCTCCATTTCTTAGTGCTGGAATTACAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: QVSAAQAASNSL*CLHFLVLELQA Trigger: GGCCTGTAATTCCAGCACTAAGAAATGGAGGCAGCAGAGAGAGTTAGAGGCAGCCTGAGCTGCAGAGACCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146321.3 |
||
| 3UTR GCA 72 bp | GTCTCTGCAGCTCAGGCTGCCTCTAACTCTCTCTGCTaGCTCCATTTCTTAGTGCTGGAATTACAGGCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: VSAAQAASNSLC*LHFLVLELQAC Trigger: ACAGGCCTGTAATTCCAGCACTAAGAAATGGAGGCAGCAGAGAGAGTTAGAGGCAGCCTGAGCTGCAGAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146321.3 |
||
| 3UTR TCA 72 bp | GATGTTGGAGGAGAGCCACAAGAAGTCACAAAGGCCTaGCAGGTTTCACTAGACACCACCACTATTGACAGC | + |
|
Preference number: 3 (lower is better) Translates to: DVGGEPQEVTKA*QVSLDTTTIDS Trigger: GCTGTCAATAGTGGTGGTGTCTAGTGAAACCTGTCAGGCCTTTGTGACTTCTTGTGGCTCTCCTCCAACATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146321.3 |
||
| 3UTR GCA 72 bp | TCAATTCACATCTTGGCTACGTTTCAACATAGGCAATaGCACAAAGAGTCCCAAGCACCCACGCTAAGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: SIHILATFQHRQ*HKESQAPTLSQ Trigger: CTGGCTTAGCGTGGGTGCTTGGGACTCTTTGTGGCATTGCCTATGTTGAAACGTAGCCAAGATGTGAATTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025050.13 ENSMUST00000231742.2 |
||
| 3UTR TCA 72 bp | AGGGAAGCCCGCCAAGTTACTAGCATTAAACAAATGTaGAGAGTGAGGGGCTTCAAACCAGAAATATCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: REARQVTSIKQM*RVRGFKPEISE Trigger: CTCAGATATTTCTGGTTTGAAGCCCCTCACTCTTCACATTTGTTTAATGCTAGTAACTTGGCGGGCTTCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025050.13 ENSMUST00000231742.2 |
||
| 3UTR GCA 72 bp | TTATTGATTGGTCTCTTATTATTTACTGACCTACTTTaGTTACTTGTGGGGCAGGAGCTGCCTGCCTTTGTC | + |
|
Preference number: 3 (lower is better) Translates to: LLIGLLLFTDLL*LLVGQELPAFV Trigger: GACAAAGGCAGGCAGCTCCTGCCCCACAAGTAAGCAAAGTAGGTCAGTAAATAATAAGAGACCAATCAATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146321.3 |
||
| CDS-3UTR CCA 90 bp | CCGCCATGCCTGGGTGACAGAGAAGGCCGTGAGGTGAGGGGTGGTGAGGAGAGCAGCTGGAGTAGGTGGTaGGCACCACAGGGGTGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: PPCLGDREGREVRGGEESSWSRW*APQGCR Trigger: ACGGCACCCCTGTGGTGCCCACCACCTACTCCAGCT...GCTCTCCTCACCACCCCTCACCTCACGGCCTTCTCTGTCACCCAGGCATGGCGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025050.13 ENSMUST00000114886.8 |
||
| 3UTR CAA 72 bp | CCAAGCACCCACGCTAAGCCAGGCCTAGCTCCCCTCTaGCCCTCCTTGCTCAAGGCCCCTCCCAGGACCCTT | + |
|
Preference number: 4 (lower is better) Translates to: PSTHAKPGLAPL*PSLLKAPPRTL Trigger: AAGGGTCCTGGGAGGGGCCTTGAGCAAGGAGGGCAAGAGGGGAGCTAGGCCTGGCTTAGCGTGGGTGCTTGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025050.13 ENSMUST00000231742.2 |
||
| CDS-3UTR CCA 90 bp | CCGCCATGCCTGGGTGACAGAGAAGGCCGTGAGGTGAGGGGTGGTGAGGAGAGCCAGGGGTGCCGTTGTTaGCAGGGTAGCCTTGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PPCLGDREGREVRGGEESQGCRC*QGSLAS Trigger: TGAGGCAAGGCTACCCTGCCAACAACGGCACCCCTG...GCTCTCCTCACCACCCCTCACCTCACGGCCTTCTCTGTCACCCAGGCATGGCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025050.13 ENSMUST00000114886.8 |
||
| CDS-3UTR CCA 90 bp | CTCCACTGCCCGCCATGCCTGGGTGACAGAGAAGGCCGTGAGGTGAGGGGTGGTTGCCTGACACGGAGCTaGAGTAGGTGGTGGGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: LHCPPCLGDREGREVRGGCLTRS*SRWWAP Trigger: TGGTGCCCACCACCTACTCCAGCTCCGTGTCAGGCA...ACCACCCCTCACCTCACGGCCTTCTCTGTCACCCAGGCATGGCGGGCAGTGGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025050.13 ENSMUST00000114886.8 |
||
| 3UTR CAA 72 bp | CACGCTAAGCCAGGCCTAGCTCCCCTCTTGCCCTCCTaGCTCAAGGCCCCTCCCAGGACCCTTTACTTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: HAKPGLAPLLPS*LKAPPRTLYFP Trigger: CGGGAAGTAAAGGGTCCTGGGAGGGGCCTTGAGCAAGGAGGGCAAGAGGGGAGCTAGGCCTGGCTTAGCGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025050.13 ENSMUST00000231742.2 |
||
| CDS-3UTR CCA 90 bp | CCAGAGGGTCACCGGTGGGCCCCTCTTCCAGATGACCTCTCACACCGAGCAGACCAGGGGTGCCGTTGTTaGCAGGGTAGCCTTGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PEGHRWAPLPDDLSHRADQGCRC*QGSLAS Trigger: TGAGGCAAGGCTACCCTGCCAACAACGGCACCCCTG...GTCTGCTCGGTGTGAGAGGTCATCTGGAAGAGGGGCCCACCGGTGACCCTCTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025050.13 ENSMUST00000231742.2 |
||
| CDS-3UTR CCA 90 bp | AGAGTCCCAAGCACCCACGCTAAGCCAGGCCTAGCTCCCCTCTTGCCCTCCTTGAGCTGGAGTAGGTGGTaGGCACCACAGGGGTGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: RVPSTHAKPGLAPLLPSLSWSRW*APQGCR Trigger: ACGGCACCCCTGTGGTGCCCACCACCTACTCCAGCT...CAAGGAGGGCAAGAGGGGAGCTAGGCCTGGCTTAGCGTGGGTGCTTGGGACTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025050.13 ENSMUST00000231742.2 |
||
| CDS-3UTR CCA 90 bp | AGAGTCCCAAGCACCCACGCTAAGCCAGGCCTAGCTCCCCTCTTGCCCTCCTTGCAGGGGTGCCGTTGTTaGCAGGGTAGCCTTGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RVPSTHAKPGLAPLLPSLQGCRC*QGSLAS Trigger: TGAGGCAAGGCTACCCTGCCAACAACGGCACCCCTG...CAAGGAGGGCAAGAGGGGAGCTAGGCCTGGCTTAGCGTGGGTGCTTGGGACTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025050.13 ENSMUST00000231742.2 |
||
| 3UTR CAA 72 bp | CTGCTGGGCCGCTGCAGGCTGTGGCGCTCCTTCCTCTaGCCTTCCACTCTTGGCCTCTCTCCCTTAGACCAT | + |
|
Preference number: 4 (lower is better) Translates to: LLGRCRLWRSFL*PSTLGLSPLDH Trigger: ATGGTCTAAGGGAGAGAGGCCAAGAGTGGAAGGCAAGAGGAAGGAGCGCCACAGCCTGCAGCGGCCCAGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146321.3 |
||
| CDS-3UTR CCA 90 bp | AAGCAGCCGCTCTTCACAAGTCCTCGGCAAGGCCGCACTGGCAGAGCTGACTGCATCCATCGGTCTGGATaGCGGCTACTGCTCACAAGC | + |
|
Preference number: 4 (lower is better) Translates to: KQPLFTSPRQGRTGRADCIHRSG*RLLLTS Trigger: GCTTGTGAGCAGTAGCCGCCATCCAGACCGATGGAT...GCAGTCAGCTCTGCCAGTGCGGCCTTGCCGAGGACTTGTGAAGAGCGGCTGCTT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146321.3 |
||
| CDS-3UTR CCA 90 bp | TTTCAACATAGGCAATGCCACAAAGAGTCCCAAGCACCCACGCTAAGCCAGGCCTGCCTGACACGGAGCTaGAGTAGGTGGTGGGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: FQHRQCHKESQAPTLSQACLTRS*SRWWAP Trigger: TGGTGCCCACCACCTACTCCAGCTCCGTGTCAGGCA...GGCCTGGCTTAGCGTGGGTGCTTGGGACTCTTTGTGGCATTGCCTATGTTGAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025050.13 ENSMUST00000231742.2 |
||
| CDS-3UTR CCA 90 bp | AGGAGTGAGAGCAAGGTGGCCGGGCTCGGCATGGCTGGGAACAGAGGACAGGGACTGTGCTTCCTCTCCTaGTTCTCAAAAATTCCAACT | + |
|
Preference number: 4 (lower is better) Translates to: RSESKVAGLGMAGNRGQGLCFLS*FSKIPT Trigger: AGTTGGAATTTTTGAGAACCAGGAGAGGAAGCACAG...TCCCTGTCCTCTGTTCCCAGCCATGCCGAGCCCGGCCACCTTGCTCTCACTCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025050.13 ENSMUST00000231742.2 |
||
| CDS-3UTR CCA 90 bp | AAATTCAGAGGAAATATCTGGCCAGGCCGGGACGAGACAAATGGGAGTGCTTCGTGCCTGACACGGAGCTaGAGTAGGTGGTGGGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: KFRGNIWPGRDETNGSASCLTRS*SRWWAP Trigger: TGGTGCCCACCACCTACTCCAGCTCCGTGTCAGGCA...CGAAGCACTCCCATTTGTCTCGTCCCGGCCTGGCCAGATATTTCCTCTGAATTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025050.13 |
||
| 3UTR CAA 72 bp | TTCCTCCTGCAGGGAATGGGGACAAACGCTGTCGCGTaGCAGCACTGTAGCTGTGAGTGTTGTCTTTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: FLLQGMGTNAVA*QHCSCECCLSG Trigger: CCCTGAAAGACAACACTCACAGCTACAGTGCTGCAACGCGACAGCGTTTGTCCCCATTCCCTGCAGGAGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146321.3 |
||
| CDS-3UTR CCA 90 bp | GGAGAGCCATGCTTCAGTCTGCTTTCCACTCTCCGGCTCTTACAGAAGTCTGCAATCCATCGGTCTGGATaGCGGCTACTGCTCACAAGC | + |
|
Preference number: 4 (lower is better) Translates to: GEPCFSLLSTLRLLQKSAIHRSG*RLLLTS Trigger: GCTTGTGAGCAGTAGCCGCCATCCAGACCGATGGAT...TGCAGACTTCTGTAAGAGCCGGAGAGTGGAAAGCAGACTGAAGCATGGCTCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025050.13 ENSMUST00000114886.8 |
||
| CDS-3UTR CCA 90 bp | TTTCAACATAGGCAATGCCACAAAGAGTCCCAAGCACCCACGCTAAGCCAGGCCGACAATCCATCGGTCTaGATGGCGGCTACTGCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: FQHRQCHKESQAPTLSQADNPSV*MAATAH Trigger: GTGAGCAGTAGCCGCCATCCAGACCGATGGATTGTC...GGCCTGGCTTAGCGTGGGTGCTTGGGACTCTTTGTGGCATTGCCTATGTTGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025050.13 ENSMUST00000231742.2 |
||
| CDS-3UTR CCA 90 bp | GCCTACTGTGAGCCTATCGGACAGAATTCAGTTTCTCTCACTGTTTTCCAGGCTAGCTGGAGTAGGTGGTaGGCACCACAGGGGTGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: AYCEPIGQNSVSLTVFQASWSRW*APQGCR Trigger: ACGGCACCCCTGTGGTGCCCACCACCTACTCCAGCT...AGCCTGGAAAACAGTGAGAGAAACTGAATTCTGTCCGATAGGCTCACAGTAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025050.13 ENSMUST00000231742.2 |
||
| CDS-3UTR CCA 90 bp | CTGGGTGACAGAGAAGGCCGTGAGGTGAGGGGTGGTGAGGAGAGCCATGCTTCACTGTGCTTCCTCTCCTaGTTCTCAAAAATTCCAACT | + |
|
Preference number: 4 (lower is better) Translates to: LGDREGREVRGGEESHASLCFLS*FSKIPT Trigger: AGTTGGAATTTTTGAGAACCAGGAGAGGAAGCACAG...TGAAGCATGGCTCTCCTCACCACCCCTCACCTCACGGCCTTCTCTGTCACCCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025050.13 ENSMUST00000114886.8 |
||
| CDS-3UTR CCA 90 bp | CTCTATAAAATACCAACCGGAGCCAGAGGGTCACCGGTGGGCCCCTCTTCCAGACTGTGCTTCCTCTCCTaGTTCTCAAAAATTCCAACT | + |
|
Preference number: 4 (lower is better) Translates to: LYKIPTGARGSPVGPSSRLCFLS*FSKIPT Trigger: AGTTGGAATTTTTGAGAACCAGGAGAGGAAGCACAG...TCTGGAAGAGGGGCCCACCGGTGACCCTCTGGCTCCGGTTGGTATTTTATAGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000025050.13 ENSMUST00000231742.2 |
||
| CDS-3UTR CCA 90 bp | TACTGTGAGCCTATCGGACAGAATTCAGTTTCTCTCACTGTTTTCCAGGCTTCGATCCATCGGTCTGGATaGCGGCTACTGCTCACAAGC | + |
|
Preference number: 4 (lower is better) Translates to: YCEPIGQNSVSLTVFQASIHRSG*RLLLTS Trigger: GCTTGTGAGCAGTAGCCGCCATCCAGACCGATGGAT...CGAAGCCTGGAAAACAGTGAGAGAAACTGAATTCTGTCCGATAGGCTCACAGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025050.13 ENSMUST00000231742.2 |
||
| 3UTR CAA 72 bp | CAAGAACCTTCCTATTTGGTTCTGGTGGAGCTAGAGTaGCCCCTTGCACATGTTAGGCAAGAACCTGAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: QEPSYLVLVELE*PLAHVRQEPEH Trigger: GTGCTCAGGTTCTTGCCTAACATGTGCAAGGGGCAACTCTAGCTCCACCAGAACCAAATAGGAAGGTTCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146321.3 |
||
| CDS-3UTR CCA 90 bp | TTCTCTCACTGTTTTCCAGGCTTCGTAACAGAAAGAAAACAGGTTCCCTTCTGTATCCATCGGTCTGGATaGCGGCTACTGCTCACAAGC | + |
|
Preference number: 4 (lower is better) Translates to: FSHCFPGFVTERKQVPFCIHRSG*RLLLTS Trigger: GCTTGTGAGCAGTAGCCGCCATCCAGACCGATGGAT...ACAGAAGGGAACCTGTTTTCTTTCTGTTACGAAGCCTGGAAAACAGTGAGAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025050.13 ENSMUST00000231742.2 |
||
| 3UTR CAA 72 bp | CAAGACTCAGGAATTCGAGGTCACAAACTGCACAAATaGGGCCACAGCCTAGTCCCAAGAACCTTCCTATTT | + |
|
Preference number: 4 (lower is better) Translates to: QDSGIRGHKLHK*GHSLVPRTFLF Trigger: AAATAGGAAGGTTCTTGGGACTAGGCTGTGGCCCAATTTGTGCAGTTTGTGACCTCGAATTCCTGAGTCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146321.3 |
||
| 3UTR CAA 72 bp | TTGGTCTCTTATTATTTACTGACCTACTTTGCTTACTaGTGGGGCAGGAGCTGCCTGCCTTTGTCTCCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: LVSYYLLTYFAY*WGRSCLPLSPK Trigger: CTTAGGAGACAAAGGCAGGCAGCTCCTGCCCCACAAGTAAGCAAAGTAGGTCAGTAAATAATAAGAGACCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146321.3 |
||
| CDS CCA 90 bp | ACACGGAGCTGGAGTAGGTGGTGGGCACCACAGGGGTGCCGTTGTTaGCAGGGTAGCCTTGCCTCAACGTCTCAAAGTATGACGCCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: TRSWSRWWAPQGCRC*QGSLASTSQSMTPA Trigger: TGCAGGCGTCATACTTTGAGACGTTGAGGCAAGGCTACCCTGCCAACAACGGCACCCCTGTGGTGCCCACCACCTACTCCAGCTCCGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025050.13 ENSMUST00000062397.13 ENSMUST00000114886.8 ENSMUST00000156429.9 ENSMUST00000231742.2 |
||
| CDS GCA 72 bp | ACACGGAGCTGGAGTAGGTGGTGGGCACCACAGGGGTaGCGTTGTTGGCAGGGTAGCCTTGCCTCAACGTCT | + |
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Preference number: 6 (lower is better) Translates to: TRSWSRWWAPQG*RCWQGSLASTS Trigger: AGACGTTGAGGCAAGGCTACCCTGCCAACAACGGCACCCCTGTGGTGCCCACCACCTACTCCAGCTCCGTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025050.13 ENSMUST00000062397.13 ENSMUST00000114886.8 ENSMUST00000156429.9 ENSMUST00000231742.2 |
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| CDS CCA 72 bp | TGGAGTAGGTGGTGGGCACCACAGGGGTGCCGTTGTTaGCAGGGTAGCCTTGCCTCAACGTCTCAAAGTATG | + |
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Preference number: 6 (lower is better) Translates to: WSRWWAPQGCRC*QGSLASTSQSM Trigger: CATACTTTGAGACGTTGAGGCAAGGCTACCCTGCCAACAACGGCACCCCTGTGGTGCCCACCACCTACTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025050.13 ENSMUST00000062397.13 ENSMUST00000114886.8 ENSMUST00000156429.9 ENSMUST00000231742.2 |
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