Pregenerated sensors for NUDT22 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037349Ensembl transcript IDs: ENSMUST00000041686.10, ENSMUST00000180765.2
Found 43 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS GCA 90 bp | TCCTCCAGGCAATGGACGACGGTCATGAGCCGGGCTCAGCTCCACTaGTACCTGCTCCTGGGAAAGTCCCCCAAGAGGGCACAGCAGCAG | + |
Preference number: 5 (lower is better) Translates to: SSRQWTTVMSRAQLH*YLLLGKSPKRAQQQ Trigger: CTGCTGCTGTGCCCTCTTGGGGGACTTTCCCAGGAGCAGGTAGCAGTGGAGCTGAGCCCGGCTCATGACCGTCGTCCATTGCCTGGAGGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041686.10 ENSMUST00000180765.2 |
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CDS GCA 90 bp | CAGCGCCCTGCTGTCGCAGCCAGGAGGCTGAGCTGGACCAGTTGGTaGCCAGGAAGTCCCGGTAGGAAGTTAGACCCAAGTGCAGGAGCA | + |
Preference number: 5 (lower is better) Translates to: QRPAVAARRLSWTSW*PGSPGRKLDPSAGA Trigger: TGCTCCTGCACTTGGGTCTAACTTCCTACCGGGACTTCCTGGGCACCAACTGGTCCAGCTCAGCCTCCTGGCTGCGACAGCAGGGCGCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041686.10 ENSMUST00000180765.2 |
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CDS GCA 90 bp | GAAGTCGTCAGCTGTGACCAGTGCGGCACCCACCCCCAGTGGGTCTaGCAGATAGGCTTGCTTGTCACCCCAATCTGCAGCGCCCTGCTG | + |
Preference number: 5 (lower is better) Translates to: EVVSCDQCGTHPQWV*QIGLLVTPICSALL Trigger: CAGCAGGGCGCTGCAGATTGGGGTGACAAGCAAGCCTATCTGGCAGACCCACTGGGGGTGGGTGCCGCACTGGTCACAGCTGACGACTTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041686.10 ENSMUST00000180765.2 |
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CDS CCA 90 bp | CTGCAGCGCCCTGCTGTCGCAGCCAGGAGGCTGAGCTGGACCAGTTaGTGCCCAGGAAGTCCCGGTAGGAAGTTAGACCCAAGTGCAGGA | + |
Preference number: 5 (lower is better) Translates to: LQRPAVAARRLSWTS*CPGSPGRKLDPSAG Trigger: TCCTGCACTTGGGTCTAACTTCCTACCGGGACTTCCTGGGCACCAACTGGTCCAGCTCAGCCTCCTGGCTGCGACAGCAGGGCGCTGCAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041686.10 ENSMUST00000180765.2 |
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CDS CCA 90 bp | CACCCCAATCTGCAGCGCCCTGCTGTCGCAGCCAGGAGGCTGAGCTaGACCAGTTGGTGCCCAGGAAGTCCCGGTAGGAAGTTAGACCCA | + |
Preference number: 5 (lower is better) Translates to: HPNLQRPAVAARRLS*TSWCPGSPGRKLDP Trigger: TGGGTCTAACTTCCTACCGGGACTTCCTGGGCACCAACTGGTCCAGCTCAGCCTCCTGGCTGCGACAGCAGGGCGCTGCAGATTGGGGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041686.10 ENSMUST00000180765.2 |
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CDS TCA 90 bp | CTACCTGCTGAGAGCGGCGCAGGAAGACAAGGAAGTCGTCAGCTGTaGCCAGTGCGGCACCCACCCCCAGTGGGTCTGCCAGATAGGCTT | + |
Preference number: 5 (lower is better) Translates to: LPAESGAGRQGSRQL*PVRHPPPVGLPDRL Trigger: AAGCCTATCTGGCAGACCCACTGGGGGTGGGTGCCGCACTGGTCACAGCTGACGACTTCCTTGTCTTCCTGCGCCGCTCTCAGCAGGTAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041686.10 ENSMUST00000180765.2 |
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CDS TCA 90 bp | TGCCCACCGGGTACATCCACCAGTCCGGGAGCTTCCGCTACCTGCTaGGAGCGGCGCAGGAAGACAAGGAAGTCGTCAGCTGTGACCAGT | + |
Preference number: 5 (lower is better) Translates to: CPPGTSTSPGASATC*ERRRKTRKSSAVTS Trigger: ACTGGTCACAGCTGACGACTTCCTTGTCTTCCTGCGCCGCTCTCAGCAGGTAGCGGAAGCTCCCGGACTGGTGGATGTACCCGGTGGGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041686.10 ENSMUST00000180765.2 |
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CDS GCA 90 bp | CTGAGAGCGGCGCAGGAAGACAAGGAAGTCGTCAGCTGTGACCAGTaGGGCACCCACCCCCAGTGGGTCTGCCAGATAGGCTTGCTTGTC | + |
Preference number: 5 (lower is better) Translates to: LRAAQEDKEVVSCDQ*GTHPQWVCQIGLLV Trigger: GACAAGCAAGCCTATCTGGCAGACCCACTGGGGGTGGGTGCCGCACTGGTCACAGCTGACGACTTCCTTGTCTTCCTGCGCCGCTCTCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041686.10 ENSMUST00000180765.2 |
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CDS CCA 90 bp | CCGAGTCTCCCAGATGGCAGTGATGGCCTTGTCTCCTCCAGGCAATaGACGACGGTCATGAGCCGGGCTCAGCTCCACTGCTACCTGCTC | + |
Preference number: 5 (lower is better) Translates to: PSLPDGSDGLVSSRQ*TTVMSRAQLHCYLL Trigger: GAGCAGGTAGCAGTGGAGCTGAGCCCGGCTCATGACCGTCGTCCATTGCCTGGAGGAGACAAGGCCATCACTGCCATCTGGGAGACTCGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041686.10 ENSMUST00000180765.2 |
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CDS CCA 90 bp | GACAAGGAAGTCGTCAGCTGTGACCAGTGCGGCACCCACCCCCAGTaGGTCTGCCAGATAGGCTTGCTTGTCACCCCAATCTGCAGCGCC | + |
Preference number: 5 (lower is better) Translates to: DKEVVSCDQCGTHPQ*VCQIGLLVTPICSA Trigger: GGCGCTGCAGATTGGGGTGACAAGCAAGCCTATCTGGCAGACCCACTGGGGGTGGGTGCCGCACTGGTCACAGCTGACGACTTCCTTGTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041686.10 ENSMUST00000180765.2 |
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CDS TCA 90 bp | ATGGCAGTGATGGCCTTGTCTCCTCCAGGCAATGGACGACGGTCATaGGCCGGGCTCAGCTCCACTGCTACCTGCTCCTGGGAAAGTCCC | + |
Preference number: 5 (lower is better) Translates to: MAVMALSPPGNGRRS*AGLSSTATCSWESP Trigger: GGGACTTTCCCAGGAGCAGGTAGCAGTGGAGCTGAGCCCGGCTCATGACCGTCGTCCATTGCCTGGAGGAGACAAGGCCATCACTGCCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041686.10 ENSMUST00000180765.2 |
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CDS GCA 90 bp | GCGATTGTAGAGGAGGATGGCGCCTTTGGCCGAGGGGCAGAGTTGTaGCCACATCTCCGTCTCCTGCAGTCTCTGTACCCTCTGTGTCTC | + |
Preference number: 5 (lower is better) Translates to: AIVEEDGAFGRGAEL*PHLRLLQSLYPLCL Trigger: GAGACACAGAGGGTACAGAGACTGCAGGAGACGGAGATGTGGGCACAACTCTGCCCCTCGGCCAAAGGCGCCATCCTCCTCTACAATCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041686.10 ENSMUST00000180765.2 |
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CDS CCA 90 bp | GCTCAGGCGAGCTGGACACCAGTGTGGCTGAGTGAAGGCGGAACTTaGGAGCATCAAAGATCCAAGGTTGGGCCTGTTGCCGAGTCTCCC | + |
Preference number: 5 (lower is better) Translates to: AQASWTPVWLSEGGT*EHQRSKVGPVAESP Trigger: GGGAGACTCGGCAACAGGCCCAACCTTGGATCTTTGATGCTCCCAAGTTCCGCCTTCACTCAGCCACACTGGTGTCCAGCTCGCCTGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041686.10 ENSMUST00000180765.2 |
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CDS CCA 90 bp | CTGACTGTAGAGGTGGATGGCGATTGTAGAGGAGGATGGCGCCTTTaGCCGAGGGGCAGAGTTGTGCCCACATCTCCGTCTCCTGCAGTC | + |
Preference number: 5 (lower is better) Translates to: LTVEVDGDCRGGWRL*PRGRVVPTSPSPAV Trigger: GACTGCAGGAGACGGAGATGTGGGCACAACTCTGCCCCTCGGCCAAAGGCGCCATCCTCCTCTACAATCGCCATCCACCTCTACAGTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041686.10 ENSMUST00000180765.2 |
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CDS TCA 90 bp | CAAAGATCCAAGGTTGGGCCTGTTGCCGAGTCTCCCAGATGGCAGTaGTGGCCTTGTCTCCTCCAGGCAATGGACGACGGTCATGAGCCG | + |
Preference number: 5 (lower is better) Translates to: QRSKVGPVAESPRWQ*WPCLLQAMDDGHEP Trigger: CGGCTCATGACCGTCGTCCATTGCCTGGAGGAGACAAGGCCATCACTGCCATCTGGGAGACTCGGCAACAGGCCCAACCTTGGATCTTTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041686.10 ENSMUST00000180765.2 |
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CDS CCA 90 bp | TCCCAACACCTGACTGTAGAGGTGGATGGCGATTGTAGAGGAGGATaGCGCCTTTGGCCGAGGGGCAGAGTTGTGCCCACATCTCCGTCT | + |
Preference number: 5 (lower is better) Translates to: SQHLTVEVDGDCRGG*RLWPRGRVVPTSPS Trigger: AGACGGAGATGTGGGCACAACTCTGCCCCTCGGCCAAAGGCGCCATCCTCCTCTACAATCGCCATCCACCTCTACAGTCAGGTGTTGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041686.10 ENSMUST00000180765.2 |
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CDS CCA 90 bp | AGGAAGTTAGACCCAAGTGCAGGAGCAGCTGTGGCTCAGGCGAGCTaGACACCAGTGTGGCTGAGTGAAGGCGGAACTTGGGAGCATCAA | + |
Preference number: 5 (lower is better) Translates to: RKLDPSAGAAVAQAS*TPVWLSEGGTWEHQ Trigger: TTGATGCTCCCAAGTTCCGCCTTCACTCAGCCACACTGGTGTCCAGCTCGCCTGAGCCACAGCTGCTCCTGCACTTGGGTCTAACTTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041686.10 ENSMUST00000180765.2 |
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CDS CCA 90 bp | CTGCCCGCGCTGGTCTCATTGCAAGCGATTCCCAACAACAGTGGCTaGCTCAAGGTGTGCAGTGGCAGGTTCACCTCATCACAGATCTCC | + |
Preference number: 5 (lower is better) Translates to: LPALVSLQAIPNNSG*LKVCSGRFTSSQIS Trigger: GGAGATCTGTGATGAGGTGAACCTGCCACTGCACACCTTGAGCCAGCCACTGTTGTTGGGAATCGCTTGCAATGAGACCAGCGCGGGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041686.10 ENSMUST00000180765.2 |
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CDS CCA 90 bp | GGCTCTGCCCGCGCTGGTCTCATTGCAAGCGATTCCCAACAACAGTaGCTGGCTCAAGGTGTGCAGTGGCAGGTTCACCTCATCACAGAT | + |
Preference number: 5 (lower is better) Translates to: GSARAGLIASDSQQQ*LAQGVQWQVHLITD Trigger: ATCTGTGATGAGGTGAACCTGCCACTGCACACCTTGAGCCAGCCACTGTTGTTGGGAATCGCTTGCAATGAGACCAGCGCGGGCAGAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041686.10 ENSMUST00000180765.2 |
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CDS GCA 90 bp | ACTGGACATAGAACTCTGCACTGGCTCTGCCCGCGCTGGTCTCATTaGAAGCGATTCCCAACAACAGTGGCTGGCTCAAGGTGTGCAGTG | + |
Preference number: 5 (lower is better) Translates to: TGHRTLHWLCPRWSH*KRFPTTVAGSRCAV Trigger: CACTGCACACCTTGAGCCAGCCACTGTTGTTGGGAATCGCTTGCAATGAGACCAGCGCGGGCAGAGCCAGTGCAGAGTTCTATGTCCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041686.10 ENSMUST00000180765.2 |
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CDS CCA 90 bp | TCAAGCTGCACTGGACATAGAACTCTGCACTGGCTCTGCCCGCGCTaGTCTCATTGCAAGCGATTCCCAACAACAGTGGCTGGCTCAAGG | + |
Preference number: 5 (lower is better) Translates to: SSCTGHRTLHWLCPR*SHCKRFPTTVAGSR Trigger: CCTTGAGCCAGCCACTGTTGTTGGGAATCGCTTGCAATGAGACCAGCGCGGGCAGAGCCAGTGCAGAGTTCTATGTCCAGTGCAGCTTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041686.10 ENSMUST00000180765.2 |
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CDS GCA 90 bp | CCTCTGAAGTCAAGCTGCACTGGACATAGAACTCTGCACTGGCTCTaGCCGCGCTGGTCTCATTGCAAGCGATTCCCAACAACAGTGGCT | + |
Preference number: 5 (lower is better) Translates to: PLKSSCTGHRTLHWL*PRWSHCKRFPTTVA Trigger: AGCCACTGTTGTTGGGAATCGCTTGCAATGAGACCAGCGCGGGCAGAGCCAGTGCAGAGTTCTATGTCCAGTGCAGCTTGACTTCAGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041686.10 ENSMUST00000180765.2 |
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CDS CAA 90 bp | TGTGACCAGTGCGGCACCCACCCCCAGTGGGTCTGCCAGATAGGCTaGCTTGTCACCCCAATCTGCAGCGCCCTGCTGTCGCAGCCAGGA | + |
Preference number: 6 (lower is better) Translates to: CDQCGTHPQWVCQIG*LVTPICSALLSQPG Trigger: TCCTGGCTGCGACAGCAGGGCGCTGCAGATTGGGGTGACAAGCAAGCCTATCTGGCAGACCCACTGGGGGTGGGTGCCGCACTGGTCACA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041686.10 ENSMUST00000180765.2 |
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CDS GCA 72 bp | GCGCAGGAAGACAAGGAAGTCGTCAGCTGTGACCAGTaGGGCACCCACCCCCAGTGGGTCTGCCAGATAGGC | + |
Preference number: 6 (lower is better) Translates to: AQEDKEVVSCDQ*GTHPQWVCQIG Trigger: GCCTATCTGGCAGACCCACTGGGGGTGGGTGCCGCACTGGTCACAGCTGACGACTTCCTTGTCTTCCTGCGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041686.10 ENSMUST00000180765.2 |
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CDS GCA 72 bp | CAATGGACGACGGTCATGAGCCGGGCTCAGCTCCACTaGTACCTGCTCCTGGGAAAGTCCCCCAAGAGGGCA | + |
Preference number: 6 (lower is better) Translates to: QWTTVMSRAQLH*YLLLGKSPKRA Trigger: TGCCCTCTTGGGGGACTTTCCCAGGAGCAGGTAGCAGTGGAGCTGAGCCCGGCTCATGACCGTCGTCCATTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041686.10 ENSMUST00000180765.2 |
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CDS GCA 72 bp | AGCTGTGACCAGTGCGGCACCCACCCCCAGTGGGTCTaGCAGATAGGCTTGCTTGTCACCCCAATCTGCAGC | + |
Preference number: 6 (lower is better) Translates to: SCDQCGTHPQWV*QIGLLVTPICS Trigger: GCTGCAGATTGGGGTGACAAGCAAGCCTATCTGGCAGACCCACTGGGGGTGGGTGCCGCACTGGTCACAGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041686.10 ENSMUST00000180765.2 |
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CDS GCA 72 bp | GAGGAGGATGGCGCCTTTGGCCGAGGGGCAGAGTTGTaGCCACATCTCCGTCTCCTGCAGTCTCTGTACCCT | + |
Preference number: 6 (lower is better) Translates to: EEDGAFGRGAEL*PHLRLLQSLYP Trigger: AGGGTACAGAGACTGCAGGAGACGGAGATGTGGGCACAACTCTGCCCCTCGGCCAAAGGCGCCATCCTCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041686.10 ENSMUST00000180765.2 |
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CDS CCA 72 bp | CCAGATGGCAGTGATGGCCTTGTCTCCTCCAGGCAATaGACGACGGTCATGAGCCGGGCTCAGCTCCACTGC | + |
Preference number: 6 (lower is better) Translates to: PDGSDGLVSSRQ*TTVMSRAQLHC Trigger: GCAGTGGAGCTGAGCCCGGCTCATGACCGTCGTCCATTGCCTGGAGGAGACAAGGCCATCACTGCCATCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041686.10 ENSMUST00000180765.2 |
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CDS CCA 72 bp | GACCCAAGTGCAGGAGCAGCTGTGGCTCAGGCGAGCTaGACACCAGTGTGGCTGAGTGAAGGCGGAACTTGG | + |
Preference number: 6 (lower is better) Translates to: DPSAGAAVAQAS*TPVWLSEGGTW Trigger: CCAAGTTCCGCCTTCACTCAGCCACACTGGTGTCCAGCTCGCCTGAGCCACAGCTGCTCCTGCACTTGGGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041686.10 ENSMUST00000180765.2 |
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CDS CCA 72 bp | GTCGTCAGCTGTGACCAGTGCGGCACCCACCCCCAGTaGGTCTGCCAGATAGGCTTGCTTGTCACCCCAATC | + |
Preference number: 6 (lower is better) Translates to: VVSCDQCGTHPQ*VCQIGLLVTPI Trigger: GATTGGGGTGACAAGCAAGCCTATCTGGCAGACCCACTGGGGGTGGGTGCCGCACTGGTCACAGCTGACGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041686.10 ENSMUST00000180765.2 |
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CDS GCA 72 bp | GCTGTCGCAGCCAGGAGGCTGAGCTGGACCAGTTGGTaGCCAGGAAGTCCCGGTAGGAAGTTAGACCCAAGT | + |
Preference number: 6 (lower is better) Translates to: AVAARRLSWTSW*PGSPGRKLDPS Trigger: ACTTGGGTCTAACTTCCTACCGGGACTTCCTGGGCACCAACTGGTCCAGCTCAGCCTCCTGGCTGCGACAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041686.10 ENSMUST00000180765.2 |
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CDS CCA 72 bp | GAGGTGGATGGCGATTGTAGAGGAGGATGGCGCCTTTaGCCGAGGGGCAGAGTTGTGCCCACATCTCCGTCT | + |
Preference number: 6 (lower is better) Translates to: EVDGDCRGGWRL*PRGRVVPTSPS Trigger: AGACGGAGATGTGGGCACAACTCTGCCCCTCGGCCAAAGGCGCCATCCTCCTCTACAATCGCCATCCACCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041686.10 ENSMUST00000180765.2 |
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CDS CAA 72 bp | GTAGAGGAGGATGGCGCCTTTGGCCGAGGGGCAGAGTaGTGCCCACATCTCCGTCTCCTGCAGTCTCTGTAC | + |
Preference number: 6 (lower is better) Translates to: VEEDGAFGRGAE*CPHLRLLQSLY Trigger: GTACAGAGACTGCAGGAGACGGAGATGTGGGCACAACTCTGCCCCTCGGCCAAAGGCGCCATCCTCCTCTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041686.10 ENSMUST00000180765.2 |
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CDS CCA 72 bp | CTGACTGTAGAGGTGGATGGCGATTGTAGAGGAGGATaGCGCCTTTGGCCGAGGGGCAGAGTTGTGCCCACA | + |
Preference number: 6 (lower is better) Translates to: LTVEVDGDCRGG*RLWPRGRVVPT Trigger: TGTGGGCACAACTCTGCCCCTCGGCCAAAGGCGCCATCCTCCTCTACAATCGCCATCCACCTCTACAGTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041686.10 ENSMUST00000180765.2 |
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CDS CAA 90 bp | ATGGCGATTGTAGAGGAGGATGGCGCCTTTGGCCGAGGGGCAGAGTaGTGCCCACATCTCCGTCTCCTGCAGTCTCTGTACCCTCTGTGT | + |
Preference number: 6 (lower is better) Translates to: MAIVEEDGAFGRGAE*CPHLRLLQSLYPLC Trigger: ACACAGAGGGTACAGAGACTGCAGGAGACGGAGATGTGGGCACAACTCTGCCCCTCGGCCAAAGGCGCCATCCTCCTCTACAATCGCCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041686.10 ENSMUST00000180765.2 |
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CDS GCA 72 bp | AGAACTCTGCACTGGCTCTGCCCGCGCTGGTCTCATTaGAAGCGATTCCCAACAACAGTGGCTGGCTCAAGG | + |
Preference number: 6 (lower is better) Translates to: RTLHWLCPRWSH*KRFPTTVAGSR Trigger: CCTTGAGCCAGCCACTGTTGTTGGGAATCGCTTGCAATGAGACCAGCGCGGGCAGAGCCAGTGCAGAGTTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041686.10 ENSMUST00000180765.2 |
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CDS CCA 72 bp | AGCTGGACACCAGTGTGGCTGAGTGAAGGCGGAACTTaGGAGCATCAAAGATCCAAGGTTGGGCCTGTTGCC | + |
Preference number: 6 (lower is better) Translates to: SWTPVWLSEGGT*EHQRSKVGPVA Trigger: GGCAACAGGCCCAACCTTGGATCTTTGATGCTCCCAAGTTCCGCCTTCACTCAGCCACACTGGTGTCCAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041686.10 ENSMUST00000180765.2 |
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CDS TCA 72 bp | CGTGGGCCTCAGGTCCCCCACTCAGGTAATAACTCCTaGCCTCCTCTGAAGTCAAGCTGCACTGGACATAGA | + |
Preference number: 6 (lower is better) Translates to: RGPQVPHSGNNS*PPLKSSCTGHR Trigger: TCTATGTCCAGTGCAGCTTGACTTCAGAGGAGGTCAGGAGTTATTACCTGAGTGGGGGACCTGAGGCCCACG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041686.10 ENSMUST00000180765.2 |
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CDS GCA 72 bp | TCAAGCTGCACTGGACATAGAACTCTGCACTGGCTCTaGCCGCGCTGGTCTCATTGCAAGCGATTCCCAACA | + |
Preference number: 6 (lower is better) Translates to: SSCTGHRTLHWL*PRWSHCKRFPT Trigger: TGTTGGGAATCGCTTGCAATGAGACCAGCGCGGGCAGAGCCAGTGCAGAGTTCTATGTCCAGTGCAGCTTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041686.10 ENSMUST00000180765.2 |
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CDS CCA 72 bp | ACTGGACATAGAACTCTGCACTGGCTCTGCCCGCGCTaGTCTCATTGCAAGCGATTCCCAACAACAGTGGCT | + |
Preference number: 6 (lower is better) Translates to: TGHRTLHWLCPR*SHCKRFPTTVA Trigger: AGCCACTGTTGTTGGGAATCGCTTGCAATGAGACCAGCGCGGGCAGAGCCAGTGCAGAGTTCTATGTCCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041686.10 ENSMUST00000180765.2 |
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CDS GCA 72 bp | AACTTGGGAGCATCAAAGATCCAAGGTTGGGCCTGTTaGCGAGTCTCCCAGATGGCAGTGATGGCCTTGTCT | + |
Preference number: 6 (lower is better) Translates to: NLGASKIQGWAC*RVSQMAVMALS Trigger: AGACAAGGCCATCACTGCCATCTGGGAGACTCGGCAACAGGCCCAACCTTGGATCTTTGATGCTCCCAAGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041686.10 ENSMUST00000180765.2 |
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CDS GCA 72 bp | CAAGCGATTCCCAACAACAGTGGCTGGCTCAAGGTGTaGAGTGGCAGGTTCACCTCATCACAGATCTCCTGT | + |
Preference number: 6 (lower is better) Translates to: QAIPNNSGWLKV*SGRFTSSQISC Trigger: ACAGGAGATCTGTGATGAGGTGAACCTGCCACTGCACACCTTGAGCCAGCCACTGTTGTTGGGAATCGCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041686.10 ENSMUST00000180765.2 |
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CDS CCA 72 bp | CTGGTCTCATTGCAAGCGATTCCCAACAACAGTGGCTaGCTCAAGGTGTGCAGTGGCAGGTTCACCTCATCA | + |
Preference number: 6 (lower is better) Translates to: LVSLQAIPNNSG*LKVCSGRFTSS Trigger: TGATGAGGTGAACCTGCCACTGCACACCTTGAGCCAGCCACTGTTGTTGGGAATCGCTTGCAATGAGACCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041686.10 ENSMUST00000180765.2 |