Pregenerated sensors for NUDT21 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031754Ensembl transcript IDs: ENSMUST00000034204.11, ENSMUST00000212622.2, ENSMUST00000212911.2, ENSMUST00000212981.2
Found 90 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCCATAGCTTGCCCCGAACTCAAGAGGTCTGCTTGCCTTCGCCTCTaGAGTGCTGTGATCAAAGATCTGTGCCTCCACTCTCCACCATCT | + |
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Preference number: 1 (lower is better) Translates to: PIACPELKRSACLRL*SAVIKDLCLHSPPS Trigger: AGATGGTGGAGAGTGGAGGCACAGATCTTTGATCACAGCACTCCAGAGGCGAAGGCAAGCAGACCTCTTGAGTTCGGGGCAAGCTATGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034204.11 |
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| 3UTR TCA 90 bp | GCCCCGAACTCAAGAGGTCTGCTTGCCTTCGCCTCTGGAGTGCTGTaGTCAAAGATCTGTGCCTCCACTCTCCACCATCTTTGTCCTGAA | + |
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Preference number: 1 (lower is better) Translates to: APNSRGLLAFASGVL*SKICASTLHHLCPE Trigger: TTCAGGACAAAGATGGTGGAGAGTGGAGGCACAGATCTTTGATCACAGCACTCCAGAGGCGAAGGCAAGCAGACCTCTTGAGTTCGGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034204.11 |
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| 3UTR GCA 90 bp | AGCTTGCCCCGAACTCAAGAGGTCTGCTTGCCTTCGCCTCTGGAGTaGTGTGATCAAAGATCTGTGCCTCCACTCTCCACCATCTTTGTC | + |
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Preference number: 1 (lower is better) Translates to: SLPRTQEVCLPSPLE*CDQRSVPPLSTIFV Trigger: GACAAAGATGGTGGAGAGTGGAGGCACAGATCTTTGATCACAGCACTCCAGAGGCGAAGGCAAGCAGACCTCTTGAGTTCGGGGCAAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034204.11 |
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| 3UTR GCA 90 bp | AAGAGCACAGACTGCTGGCTGCTCTTCAGAGGACAGGAATTTAGATaGCTAGCACCCACTTGGCAGCTCACAGCCATGTCTGACTCCAGT | + |
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Preference number: 1 (lower is better) Translates to: KSTDCWLLFRGQEFR*LAPTWQLTAMSDSS Trigger: ACTGGAGTCAGACATGGCTGTGAGCTGCCAAGTGGGTGCTAGGCATCTAAATTCCTGTCCTCTGAAGAGCAGCCAGCAGTCTGTGCTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034204.11 |
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| 3UTR GCA 90 bp | ACAAGAATGTTCTGTTTAAAACCAATCCCCGCTGGGCAGTGGAGGTaGATGCCTTTAATCCCAGTACTTGGAAGGGAGGCAGAGGCAGGC | + |
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Preference number: 1 (lower is better) Translates to: TRMFCLKPIPAGQWR*MPLIPVLGREAEAG Trigger: GCCTGCCTCTGCCTCCCTTCCAAGTACTGGGATTAAAGGCATGCACCTCCACTGCCCAGCGGGGATTGGTTTTAAACAGAACATTCTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034204.11 |
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| 3UTR CCA 90 bp | GGGTACACAGATGCACCTGAAGGCATCACACCCACACATTCTTTTTaGCAGAGGGGAGGTCTTGAGACAGGGTTTCTATGTGTAGCTGTG | + |
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Preference number: 1 (lower is better) Translates to: GYTDAPEGITPTHSF*QRGGLETGFLCVAV Trigger: CACAGCTACACATAGAAACCCTGTCTCAAGACCTCCCCTCTGCCAAAAAGAATGTGTGGGTGTGATGCCTTCAGGTGCATCTGTGTACCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034204.11 |
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| 3UTR CCA 90 bp | ACTAACATTTTATGGACCAGGCTCAGCCTTAAGAGCACAGACTGCTaGCTGCTCTTCAGAGGACAGGAATTTAGATGCCTAGCACCCACT | + |
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Preference number: 1 (lower is better) Translates to: TNILWTRLSLKSTDC*LLFRGQEFRCLAPT Trigger: AGTGGGTGCTAGGCATCTAAATTCCTGTCCTCTGAAGAGCAGCCAGCAGTCTGTGCTCTTAAGGCTGAGCCTGGTCCATAAAATGTTAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034204.11 |
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| 3UTR TCA 90 bp | AGGTCAGCCATGTCAGATCCATGTAACTGGAATTACAGATGGCTGTaGGCCACCACATGTGTGCTTAGAACCAAGTCCAAGTCCTATGCA | + |
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Preference number: 1 (lower is better) Translates to: RSAMSDPCNWNYRWL*ATTCVLRTKSKSYA Trigger: TGCATAGGACTTGGACTTGGTTCTAAGCACACATGTGGTGGCTCACAGCCATCTGTAATTCCAGTTACATGGATCTGACATGGCTGACCT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034204.11 |
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| 3UTR TCA 90 bp | GTTACAAAGTGGATTAGGAGTGACTCCAGCTCAAGCACTGCTTTCTaGCAGCACTCTGAATCTCAGGTAGGCCGTTTACACTTCTCCACT | + |
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Preference number: 1 (lower is better) Translates to: VTKWIRSDSSSSTAF*QHSESQVGRLHFST Trigger: AGTGGAGAAGTGTAAACGGCCTACCTGAGATTCAGAGTGCTGTCAGAAAGCAGTGCTTGAGCTGGAGTCACTCCTAATCCACTTTGTAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034204.11 |
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| 3UTR TCA 90 bp | CCTACAGCCAACAAGTCTGCAATAAAGCAACTATGGTGGCCGCAATaGCACAATCAGCCAAGTCCTTTACCCATTATTTTTATGAGTGTT | + |
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Preference number: 1 (lower is better) Translates to: PTANKSAIKQLWWPQ*HNQPSPLPIIFMSV Trigger: AACACTCATAAAAATAATGGGTAAAGGACTTGGCTGATTGTGTCATTGCGGCCACCATAGTTGCTTTATTGCAGACTTGTTGGCTGTAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034204.11 |
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| 3UTR GCA 90 bp | CTGTCAAGACAGCATAAAAGTGTGAGAACTAATCAAGCTTATCTCTaGCTATTACAAATGTTAAGCTGGCTGCCTCTTGTAACTTTTCCT | + |
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Preference number: 1 (lower is better) Translates to: LSRQHKSVRTNQAYL*LLQMLSWLPLVTFP Trigger: AGGAAAAGTTACAAGAGGCAGCCAGCTTAACATTTGTAATAGGCAGAGATAAGCTTGATTAGTTCTCACACTTTTATGCTGTCTTGACAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034204.11 |
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| 3UTR TCA 90 bp | ATCTCTGTTCATCAGGAAACAAGGGTATTGGGATCCAAATGGAATTaGCCAGAAAGCTTTAAAACTTTGTGTTTATGTGACAAGAATGTT | + |
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Preference number: 1 (lower is better) Translates to: ISVHQETRVLGSKWN*PESFKTLCLCDKNV Trigger: AACATTCTTGTCACATAAACACAAAGTTTTAAAGCTTTCTGGTCAATTCCATTTGGATCCCAATACCCTTGTTTCCTGATGAACAGAGAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034204.11 |
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| 3UTR-3UTR CCA 90 bp | ACCAGGATGGCCTCAAAACTCAGAAATCCGCCTGCCTCTGCCTCCCCAGTGCTGGCTTGCCTTCGCCTCTaGAGTGCTGTGATCAAAGAT | + |
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Preference number: 2 (lower is better) Translates to: TRMASKLRNPPASASPVLACLRL*SAVIKD Trigger: ATCTTTGATCACAGCACTCCAGAGGCGAAGGCAAGC...CAGCACTGGGGAGGCAGAGGCAGGCGGATTTCTGAGTTTTGAGGCCATCCTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034204.11 |
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| 3UTR-3UTR CCA 90 bp | ACCAGGATGGCCTCAAAACTCAGAAATCCGCCTGCCTCTGCCTCCCCAGTGCTGTACCACATGCATGTCTaGTGTCCAAGGTCAGCCATG | + |
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Preference number: 2 (lower is better) Translates to: TRMASKLRNPPASASPVLYHMHV*CPRSAM Trigger: CATGGCTGACCTTGGACACCAGACATGCATGTGGTA...CAGCACTGGGGAGGCAGAGGCAGGCGGATTTCTGAGTTTTGAGGCCATCCTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034204.11 |
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| 3UTR-3UTR CCA 90 bp | ACCAGGATGGCCTCAAAACTCAGAAATCCGCCTGCCTCTGCCTCCCCAGTGCTGAAAACTGCTGGCCCCTaGAGGAGAACTAGTGGCTTT | + |
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Preference number: 2 (lower is better) Translates to: TRMASKLRNPPASASPVLKTAGP*RRTSGF Trigger: AAAGCCACTAGTTCTCCTCCAGGGGCCAGCAGTTTT...CAGCACTGGGGAGGCAGAGGCAGGCGGATTTCTGAGTTTTGAGGCCATCCTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000034204.11 |
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| 3UTR-3UTR TCA 90 bp | ACCAGGATGGCCTCAAAACTCAGAAATCCGCCTGCCTCTGCCTCCCCAGTGCTGATCTTAAAACTTTGTTaGGATAGGGGTCTCACCACG | + |
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Preference number: 2 (lower is better) Translates to: TRMASKLRNPPASASPVLILKLC*DRGLTT Trigger: CGTGGTGAGACCCCTATCTCAACAAAGTTTTAAGAT...CAGCACTGGGGAGGCAGAGGCAGGCGGATTTCTGAGTTTTGAGGCCATCCTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000034204.11 |
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| 3UTR-3UTR GCA 90 bp | CAGCACTCTGAATCTCAGGTAGGCCGTTTACACTTCTCCACTCTCCCAGAACATCTCAAGAGGTCTGCTTaGCTTCGCCTCTGGAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: QHSESQVGRLHFSTLPEHLKRSA*LRLWSA Trigger: AGCACTCCAGAGGCGAAGGCAAGCAGACCTCTTGAG...ATGTTCTGGGAGAGTGGAGAAGTGTAAACGGCCTACCTGAGATTCAGAGTGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034204.11 |
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| 3UTR-3UTR CCA 90 bp | CAGCACTCTGAATCTCAGGTAGGCCGTTTACACTTCTCCACTCTCCCAGAACATTGTTACATAAACTACTaGGGCAAAACTGCTGGCCCC | + |
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Preference number: 2 (lower is better) Translates to: QHSESQVGRLHFSTLPEHCYINY*GKTAGP Trigger: GGGGCCAGCAGTTTTGCCCCAGTAGTTTATGTAACA...ATGTTCTGGGAGAGTGGAGAAGTGTAAACGGCCTACCTGAGATTCAGAGTGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034204.11 |
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| 3UTR-3UTR CCA 90 bp | CAGCACTCTGAATCTCAGGTAGGCCGTTTACACTTCTCCACTCTCCCAGAACATCAAACAGGAAGGTGGTaGCAATTTAGGGAACAAGAG | + |
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Preference number: 2 (lower is better) Translates to: QHSESQVGRLHFSTLPEHQTGRW*QFREQE Trigger: CTCTTGTTCCCTAAATTGCCACCACCTTCCTGTTTG...ATGTTCTGGGAGAGTGGAGAAGTGTAAACGGCCTACCTGAGATTCAGAGTGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034204.11 |
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| 3UTR-3UTR GCA 90 bp | AGGCCGTTTACACTTCTCCACTCTCCCAGAACATTAACACGAACACCTGAAACCAGCAATCCACAGCAGTaGAAACAATCACTATGCCAT | + |
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Preference number: 2 (lower is better) Translates to: RPFTLLHSPRTLTRTPETSNPQQ*KQSLCH Trigger: ATGGCATAGTGATTGTTTGCACTGCTGTGGATTGCT...GGTTTCAGGTGTTCGTGTTAATGTTCTGGGAGAGTGGAGAAGTGTAAACGGCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034204.11 |
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| 3UTR-3UTR GCA 90 bp | AACCTTAACACCTGTGCTCTCTTTGAATGCCTGAAAGAACACATAAAATTTGTAAAATCCGCCTGCCTCTaGCTCCCCAGTGCTGGGATT | + |
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Preference number: 2 (lower is better) Translates to: NLNTCALFECLKEHIKFVKSACL*LPSAGI Trigger: AATCCCAGCACTGGGGAGGCAGAGGCAGGCGGATTT...TACAAATTTTATGTGTTCTTTCAGGCATTCAAAGAGAGCACAGGTGTTAAGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034204.11 |
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| 3UTR-3UTR CCA 90 bp | AGGCCGTTTACACTTCTCCACTCTCCCAGAACATTAACACGAACACCTGAAACCCGTCAGGTAATATATTaGGAATTCTTTGTAACAGAG | + |
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Preference number: 2 (lower is better) Translates to: RPFTLLHSPRTLTRTPETRQVIY*EFFVTE Trigger: CTCTGTTACAAAGAATTCCCAATATATTACCTGACG...GGTTTCAGGTGTTCGTGTTAATGTTCTGGGAGAGTGGAGAAGTGTAAACGGCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034204.11 |
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| 3UTR-3UTR TCA 90 bp | ATATATGAACATAATTACCAACTTCTCTGTTTGGAGGACACATGGACTGAACCCCACCTGTGCTCTCTTTaGATGCCTGAAAGAACACAT | + |
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Preference number: 2 (lower is better) Translates to: IYEHNYQLLCLEDTWTEPHLCSL*MPERTH Trigger: ATGTGTTCTTTCAGGCATTCAAAGAGAGCACAGGTG...GGGTTCAGTCCATGTGTCCTCCAAACAGAGAAGTTGGTAATTATGTTCATATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034204.11 |
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| 3UTR-3UTR CCA 90 bp | GCCAAAGCTTTGCTTTCTCAACACGCTGCTCTTCTCTCAATGGAACAGTATAATCAGAATATGAATGGTTaGCTCAAGCACTTACAGTTG | + |
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Preference number: 2 (lower is better) Translates to: AKALLSQHAALLSMEQYNQNMNG*LKHLQL Trigger: CAACTGTAAGTGCTTGAGCCAACCATTCATATTCTG...ATTATACTGTTCCATTGAGAGAAGAGCAGCGTGTTGAGAAAGCAAAGCTTTGGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034204.11 |
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| 3UTR CAA 90 bp | ATGATTAGAACAGCAAGTAACTTAAAGGTCTCAGAATATGAATGGTaGGCTCAAGCACTTACAGTTGGAGGAATCCGAGTCAGCTTAAGT | + |
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Preference number: 2 (lower is better) Translates to: MIRTASNLKVSEYEW*AQALTVGGIRVSLS Trigger: ACTTAAGCTGACTCGGATTCCTCCAACTGTAAGTGCTTGAGCCAACCATTCATATTCTGAGACCTTTAAGTTACTTGCTGTTCTAATCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034204.11 |
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| 3UTR-3UTR CCA 90 bp | AACCTTAACACCTGTGCTCTCTTTGAATGCCTGAAAGAACACATAAAATTTGTAAGTTTGAGGCCAACCTaGTCTACAGAGTCAATTCCA | + |
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Preference number: 2 (lower is better) Translates to: NLNTCALFECLKEHIKFVSLRPT*STESIP Trigger: TGGAATTGACTCTGTAGACCAGGTTGGCCTCAAACT...TACAAATTTTATGTGTTCTTTCAGGCATTCAAAGAGAGCACAGGTGTTAAGGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034204.11 |
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| 3UTR-3UTR GCA 90 bp | ACAGCAGTGCAAACAATCACTATGCCATTATATGAAAATACTGCAATGAGTTCTAAAGCTAATGAACACTaGCACATGTTTCCACCACTA | + |
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Preference number: 2 (lower is better) Translates to: TAVQTITMPLYENTAMSSKANEH*HMFPPL Trigger: TAGTGGTGGAAACATGTGGCAGTGTTCATTAGCTTT...AGAACTCATTGCAGTATTTTCATATAATGGCATAGTGATTGTTTGCACTGCTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034204.11 |
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| 3UTR GCA 72 bp | CAGGATGGCCTCAAAACTCAGAAATCCGCCTGCCTCTaGCTCCCCAGTGCTGGGATTAAAGGTGTGCACCAC | + |
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Preference number: 3 (lower is better) Translates to: QDGLKTQKSACL*LPSAGIKGVHH Trigger: GTGGTGCACACCTTTAATCCCAGCACTGGGGAGGCAGAGGCAGGCGGATTTCTGAGTTTTGAGGCCATCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034204.11 |
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| 3UTR GCA 72 bp | CGAACTCAAGAGGTCTGCTTGCCTTCGCCTCTGGAGTaGTGTGATCAAAGATCTGTGCCTCCACTCTCCACC | + |
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Preference number: 3 (lower is better) Translates to: RTQEVCLPSPLE*CDQRSVPPLST Trigger: GGTGGAGAGTGGAGGCACAGATCTTTGATCACAGCACTCCAGAGGCGAAGGCAAGCAGACCTCTTGAGTTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034204.11 |
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| 3UTR GCA 72 bp | GACTGCTGGCTGCTCTTCAGAGGACAGGAATTTAGATaGCTAGCACCCACTTGGCAGCTCACAGCCATGTCT | + |
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Preference number: 3 (lower is better) Translates to: DCWLLFRGQEFR*LAPTWQLTAMS Trigger: AGACATGGCTGTGAGCTGCCAAGTGGGTGCTAGGCATCTAAATTCCTGTCCTCTGAAGAGCAGCCAGCAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034204.11 |
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| 3UTR CCA 72 bp | GCCAAGAGGAGAGCTGAGCTGATGAAAGCCACAGCTTaGGACAGCTCATCATGCAGGAACCATGTAAGGTGC | + |
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Preference number: 3 (lower is better) Translates to: AKRRAELMKATA*DSSSCRNHVRC Trigger: GCACCTTACATGGTTCCTGCATGATGAGCTGTCCCAAGCTGTGGCTTTCATCAGCTCAGCTCTCCTCTTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034204.11 |
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| 3UTR TCA 72 bp | TCAAGAGGTCTGCTTGCCTTCGCCTCTGGAGTGCTGTaGTCAAAGATCTGTGCCTCCACTCTCCACCATCTT | + |
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Preference number: 3 (lower is better) Translates to: SRGLLAFASGVL*SKICASTLHHL Trigger: AAGATGGTGGAGAGTGGAGGCACAGATCTTTGATCACAGCACTCCAGAGGCGAAGGCAAGCAGACCTCTTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034204.11 |
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| 3UTR-3UTR CAA 90 bp | TCAGGTAGGCCGTTTACACTTCTCCACTCTCCCAGAACATTAACACGAACACCTACTCAAGAGGTCTGCTaGCCTTCGCCTCTGGAGTGC | + |
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Preference number: 3 (lower is better) Translates to: SGRPFTLLHSPRTLTRTPTQEVC*PSPLEC Trigger: GCACTCCAGAGGCGAAGGCAAGCAGACCTCTTGAGT...AGGTGTTCGTGTTAATGTTCTGGGAGAGTGGAGAAGTGTAAACGGCCTACCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034204.11 |
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| 3UTR TCA 72 bp | CATGGACACCGTACACACAGGGTACACAGATGCACCTaGAGGCATCACACCCACACATTCTTTTTGGCAGAG | + |
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Preference number: 3 (lower is better) Translates to: HGHRTHRVHRCT*RHHTHTFFLAE Trigger: CTCTGCCAAAAAGAATGTGTGGGTGTGATGCCTTCAGGTGCATCTGTGTACCCTGTGTGTACGGTGTCCATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034204.11 |
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| 3UTR GCA 72 bp | TTCTGTTTAAAACCAATCCCCGCTGGGCAGTGGAGGTaGATGCCTTTAATCCCAGTACTTGGAAGGGAGGCA | + |
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Preference number: 3 (lower is better) Translates to: FCLKPIPAGQWR*MPLIPVLGREA Trigger: TGCCTCCCTTCCAAGTACTGGGATTAAAGGCATGCACCTCCACTGCCCAGCGGGGATTGGTTTTAAACAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034204.11 |
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| 3UTR CCA 72 bp | CACACTCAGCTAGCTGGACTCTGTTACATAAACTACTaGGGCAAAACTGCTGGCCCCTGGAGGAGAACTAGT | + |
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Preference number: 3 (lower is better) Translates to: HTQLAGLCYINY*GKTAGPWRRTS Trigger: ACTAGTTCTCCTCCAGGGGCCAGCAGTTTTGCCCCAGTAGTTTATGTAACAGAGTCCAGCTAGCTGAGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034204.11 |
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| 3UTR TCA 72 bp | CACACCCACACATTCTTTTTGGCAGAGGGGAGGTCTTaGGACAGGGTTTCTATGTGTAGCTGTGGCTGTCTT | + |
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Preference number: 3 (lower is better) Translates to: HTHTFFLAEGRS*DRVSMCSCGCL Trigger: AAGACAGCCACAGCTACACATAGAAACCCTGTCTCAAGACCTCCCCTCTGCCAAAAAGAATGTGTGGGTGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034204.11 |
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| 3UTR CCA 72 bp | GATGCACCTGAAGGCATCACACCCACACATTCTTTTTaGCAGAGGGGAGGTCTTGAGACAGGGTTTCTATGT | + |
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Preference number: 3 (lower is better) Translates to: DAPEGITPTHSF*QRGGLETGFLC Trigger: ACATAGAAACCCTGTCTCAAGACCTCCCCTCTGCCAAAAAGAATGTGTGGGTGTGATGCCTTCAGGTGCATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034204.11 |
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| 3UTR TCA 72 bp | GAACAGCAAGTTAAATGGATAAGCCAAGAGGAGAGCTaGGCTGATGAAAGCCACAGCTTGGGACAGCTCATC | + |
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Preference number: 3 (lower is better) Translates to: EQQVKWISQEES*ADESHSLGQLI Trigger: GATGAGCTGTCCCAAGCTGTGGCTTTCATCAGCTCAGCTCTCCTCTTGGCTTATCCATTTAACTTGCTGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034204.11 |
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| 3UTR CCA 72 bp | AGAATGTTCTGTTTAAAACCAATCCCCGCTGGGCAGTaGAGGTGCATGCCTTTAATCCCAGTACTTGGAAGG | + |
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Preference number: 3 (lower is better) Translates to: RMFCLKPIPAGQ*RCMPLIPVLGR Trigger: CCTTCCAAGTACTGGGATTAAAGGCATGCACCTCCACTGCCCAGCGGGGATTGGTTTTAAACAGAACATTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034204.11 |
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| 3UTR TCA 72 bp | ATGTCAGATCCATGTAACTGGAATTACAGATGGCTGTaGGCCACCACATGTGTGCTTAGAACCAAGTCCAAG | + |
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Preference number: 3 (lower is better) Translates to: MSDPCNWNYRWL*ATTCVLRTKSK Trigger: CTTGGACTTGGTTCTAAGCACACATGTGGTGGCTCACAGCCATCTGTAATTCCAGTTACATGGATCTGACAT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034204.11 |
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| 3UTR-3UTR CAA 90 bp | AGGCCGTTTACACTTCTCCACTCTCCCAGAACATTAACACGAACACCTGAAACCACCTCTAGAATCCAGTaGATTCAGACTATTCCTTTG | + |
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Preference number: 3 (lower is better) Translates to: RPFTLLHSPRTLTRTPETTSRIQ*IQTIPL Trigger: CAAAGGAATAGTCTGAATCAACTGGATTCTAGAGGT...GGTTTCAGGTGTTCGTGTTAATGTTCTGGGAGAGTGGAGAAGTGTAAACGGCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034204.11 |
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| 3UTR TCA 72 bp | GACAGCTCATCATGCAGGAACCATGTAAGGTGCCCTTaGGAGATAATGGCCACTAGACTAACATTTTATGGA | + |
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Preference number: 3 (lower is better) Translates to: DSSSCRNHVRCP*EIMATRLTFYG Trigger: TCCATAAAATGTTAGTCTAGTGGCCATTATCTCTCAAGGGCACCTTACATGGTTCCTGCATGATGAGCTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034204.11 |
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| 3UTR CCA 72 bp | AGAACAGCAAGTAACTTAAAGGTCTCAGAATATGAATaGTTGGCTCAAGCACTTACAGTTGGAGGAATCCGA | + |
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Preference number: 3 (lower is better) Translates to: RTASNLKVSEYE*LAQALTVGGIR Trigger: TCGGATTCCTCCAACTGTAAGTGCTTGAGCCAACCATTCATATTCTGAGACCTTTAAGTTACTTGCTGTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034204.11 |
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| 3UTR TCA 72 bp | AACAAGTCTGCAATAAAGCAACTATGGTGGCCGCAATaGCACAATCAGCCAAGTCCTTTACCCATTATTTTT | + |
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Preference number: 3 (lower is better) Translates to: NKSAIKQLWWPQ*HNQPSPLPIIF Trigger: AAAAATAATGGGTAAAGGACTTGGCTGATTGTGTCATTGCGGCCACCATAGTTGCTTTATTGCAGACTTGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034204.11 |
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| 3UTR GCA 72 bp | GTCATGGCTCACTCAGTAAGAAGCAATCCACAGCAGTaGAAACAATCACTATGCCATTATATGAAAATACTG | + |
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Preference number: 3 (lower is better) Translates to: VMAHSVRSNPQQ*KQSLCHYMKIL Trigger: CAGTATTTTCATATAATGGCATAGTGATTGTTTGCACTGCTGTGGATTGCTTCTTACTGAGTGAGCCATGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034204.11 |
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| 3UTR GCA 72 bp | CAGCATAAAAGTGTGAGAACTAATCAAGCTTATCTCTaGCTATTACAAATGTTAAGCTGGCTGCCTCTTGTA | + |
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Preference number: 3 (lower is better) Translates to: QHKSVRTNQAYL*LLQMLSWLPLV Trigger: TACAAGAGGCAGCCAGCTTAACATTTGTAATAGGCAGAGATAAGCTTGATTAGTTCTCACACTTTTATGCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034204.11 |
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| 3UTR CCA 72 bp | ATACTATATATGAACATAATTACCAACTTCTCTGTTTaGAGGACACATGGACTGAACCCAAACCTTCCTAGG | + |
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Preference number: 3 (lower is better) Translates to: ILYMNIITNFSV*RTHGLNPNLPR Trigger: CCTAGGAAGGTTTGGGTTCAGTCCATGTGTCCTCCAAACAGAGAAGTTGGTAATTATGTTCATATATAGTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034204.11 |
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| 3UTR CCA 72 bp | TCTAATTCATCTCTGTTCATCAGGAAACAAGGGTATTaGGATCCAAATGGAATTGACCAGAAAGCTTTAAAA | + |
|
Preference number: 3 (lower is better) Translates to: SNSSLFIRKQGY*DPNGIDQKALK Trigger: TTTTAAAGCTTTCTGGTCAATTCCATTTGGATCCCAATACCCTTGTTTCCTGATGAACAGAGATGAATTAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034204.11 |
||
| CDS-3UTR GCA 90 bp | AGAGAAAACCAAAACTTGTTCTACAGTTACTCTTCTACACGTGTAAGCTGTGCTCGGGGCCAGCCCGTCTaGGAGCGATTGGGCGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: RENQNLFYSYSSTRVSCARGQPV*ERLGGT Trigger: GGTGCCGCCCAATCGCTCGCAGACGGGCTGGCCCCG...AGCACAGCTTACACGTGTAGAAGAGTAACTGTAGAACAAGTTTTGGTTTTCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034204.11 |
||
| 3UTR CAA 72 bp | CTTGAGACAGGGTTTCTATGTGTAGCTGTGGCTGTCTaGAGCCTTTGTAGACCAGGTTGCAAGCTGGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LETGFLCVAVAV*SLCRPGCKLAS Trigger: AGAGGCCAGCTTGCAACCTGGTCTACAAAGGCTCAAGACAGCCACAGCTACACATAGAAACCCTGTCTCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034204.11 |
||
| CDS-3UTR TCA 90 bp | CCACCACTATCTCGGTCATATTCATTTTACTCTTCAAACAGGAAGGTGGTGGCATCCTCCCTCATGCGCTaGAATCTGGCTGCAACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PPLSRSYSFYSSNRKVVASSLMR*NLAATE Trigger: CTCTGTTGCAGCCAGATTTCAGCGCATGAGGGAGGA...TGCCACCACCTTCCTGTTTGAAGAGTAAAATGAATATGACCGAGATAGTGGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034204.11 ENSMUST00000212981.2 |
||
| CDS-3UTR GCA 90 bp | TTTCCACCACTATCTCGGTCATATTCATTTTACTCTTCAAACAGGAAGGTGGTGAAAGTTGTCCCCAGCTaGAGCAGGAGCACGTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: FPPLSRSYSFYSSNRKVVKVVPS*SRSTWG Trigger: GCCCCACGTGCTCCTGCTGCAGCTGGGGACAACTTT...CACCACCTTCCTGTTTGAAGAGTAAAATGAATATGACCGAGATAGTGGTGGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000034204.11 ENSMUST00000212981.2 |
||
| CDS-3UTR GCA 90 bp | GCTAATGAACACTGCCACATGTTTCCACCACTATCTCGGTCATATTCATTTTACAAAGTTGTCCCCAGCTaGAGCAGGAGCACGTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: ANEHCHMFPPLSRSYSFYKVVPS*SRSTWG Trigger: GCCCCACGTGCTCCTGCTGCAGCTGGGGACAACTTT...GTAAAATGAATATGACCGAGATAGTGGTGGAAACATGTGGCAGTGTTCATTAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000034204.11 ENSMUST00000212622.2 ENSMUST00000212981.2 |
||
| CDS-3UTR TCA 90 bp | AGAGAAAACCAAAACTTGTTCTACAGTTACTCTTCTACACGTGTAAGCTGTGCTTCCTCCCTCATGCGCTaGAATCTGGCTGCAACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RENQNLFYSYSSTRVSCASSLMR*NLAATE Trigger: CTCTGTTGCAGCCAGATTTCAGCGCATGAGGGAGGA...AGCACAGCTTACACGTGTAGAAGAGTAACTGTAGAACAAGTTTTGGTTTTCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034204.11 ENSMUST00000212981.2 |
||
| CDS-3UTR TCA 90 bp | GCTAATGAACACTGCCACATGTTTCCACCACTATCTCGGTCATATTCATTTTACGGCAGGCGGTGTTCATaGACAATCAGAACCCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ANEHCHMFPPLSRSYSFYGRRCS*TIRTPS Trigger: AGAAGGGGTTCTGATTGTTCATGAACACCGCCTGCC...GTAAAATGAATATGACCGAGATAGTGGTGGAAACATGTGGCAGTGTTCATTAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034204.11 ENSMUST00000212622.2 ENSMUST00000212981.2 |
||
| CDS-3UTR CCA 90 bp | TCAGGTAGGCCGTTTACACTTCTCCACTCTCCCAGAACATTAACACGAACACCTAGGAGGTTCAAAATTTaGTCTCCACCAGTTCCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: SGRPFTLLHSPRTLTRTPRRFKI*SPPVPN Trigger: ATTGGGAACTGGTGGAGACCAAATTTTGAACCTCCT...AGGTGTTCGTGTTAATGTTCTGGGAGAGTGGAGAAGTGTAAACGGCCTACCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034204.11 |
||
| CDS-3UTR CCA 90 bp | TCAGGTAGGCCGTTTACACTTCTCCACTCTCCCAGAACATTAACACGAACACCTATACAGCTCAAACAATaGTGCAGCTACCAGCTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: SGRPFTLLHSPRTLTRTPIQLKQ*CSYQLV Trigger: TACAAGCTGGTAGCTGCACCATTGTTTGAGCTGTAT...AGGTGTTCGTGTTAATGTTCTGGGAGAGTGGAGAAGTGTAAACGGCCTACCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034204.11 |
||
| CDS-3UTR GCA 90 bp | GCTAATGAACACTGCCACATGTTTCCACCACTATCTCGGTCATATTCATTTTACGGGTCCATACCCCGGTaGATTGTCATACAGCTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: ANEHCHMFPPLSRSYSFYGSIPR*IVIQLK Trigger: TTTGAGCTGTATGACAATGCACCGGGGTATGGACCC...GTAAAATGAATATGACCGAGATAGTGGTGGAAACATGTGGCAGTGTTCATTAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034204.11 ENSMUST00000212981.2 |
||
| CDS-3UTR CCA 90 bp | CACCACTATCTCGGTCATATTCATTTTACTCTTCAAACAGGAAGGTGGTGGCAAAACTTCATCTTCTCCTaGGTTAAGTTCCCCACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HHYLGHIHFTLQTGRWWQNFIFS*VKFPTR Trigger: CCTGGTGGGGAACTTAACCCAGGAGAAGATGAAGTT...TTGCCACCACCTTCCTGTTTGAAGAGTAAAATGAATATGACCGAGATAGTGGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000034204.11 ENSMUST00000212981.2 |
||
| CDS-3UTR CCA 90 bp | TTCCACCACTATCTCGGTCATATTCATTTTACTCTTCAAACAGGAAGGTGGTGGAACTTCATCTTCTCCTaGGTTAAGTTCCCCACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: FHHYLGHIHFTLQTGRWWNFIFS*VKFPTR Trigger: CCTGGTGGGGAACTTAACCCAGGAGAAGATGAAGTT...CCACCACCTTCCTGTTTGAAGAGTAAAATGAATATGACCGAGATAGTGGTGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034204.11 ENSMUST00000212981.2 |
||
| CDS-3UTR GCA 90 bp | AGAGAAAACCAAAACTTGTTCTACAGTTACTCTTCTACACGTGTAAGCTGTGCTGGGTCCATACCCCGGTaGATTGTCATACAGCTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: RENQNLFYSYSSTRVSCAGSIPR*IVIQLK Trigger: TTTGAGCTGTATGACAATGCACCGGGGTATGGACCC...AGCACAGCTTACACGTGTAGAAGAGTAACTGTAGAACAAGTTTTGGTTTTCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000034204.11 ENSMUST00000212981.2 |
||
| CDS-3UTR CCA 90 bp | GCTAATGAACACTGCCACATGTTTCCACCACTATCTCGGTCATATTCATTTTACAACTTCATCTTCTCCTaGGTTAAGTTCCCCACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ANEHCHMFPPLSRSYSFYNFIFS*VKFPTR Trigger: CCTGGTGGGGAACTTAACCCAGGAGAAGATGAAGTT...GTAAAATGAATATGACCGAGATAGTGGTGGAAACATGTGGCAGTGTTCATTAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034204.11 ENSMUST00000212622.2 ENSMUST00000212981.2 |
||
| CDS-3UTR TCA 90 bp | ACAGCAGTGCAAACAATCACTATGCCATTATATGAAAATACTGCAATGAGTTCTGGCAGGCGGTGTTCATaGACAATCAGAACCCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TAVQTITMPLYENTAMSSGRRCS*TIRTPS Trigger: AGAAGGGGTTCTGATTGTTCATGAACACCGCCTGCC...AGAACTCATTGCAGTATTTTCATATAATGGCATAGTGATTGTTTGCACTGCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034204.11 |
||
| CDS-3UTR CCA 90 bp | GCTAATGAACACTGCCACATGTTTCCACCACTATCTCGGTCATATTCATTTTACCAAACAGGAAGGTGGTaGCAATTTAGGGAACAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: ANEHCHMFPPLSRSYSFYQTGRW*QFREQE Trigger: CTCTTGTTCCCTAAATTGCCACCACCTTCCTGTTTG...GTAAAATGAATATGACCGAGATAGTGGTGGAAACATGTGGCAGTGTTCATTAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212622.2 |
||
| CDS-3UTR TCA 90 bp | TGCTGCTTACTAAAATCATGTTTATCATTACGTATACAACACCTCAGATTCCCACAATGCAGTCATCAATaGCCCAGTCTTGCAGGACTC | + |
|
Preference number: 4 (lower is better) Translates to: CCLLKSCLSLRIQHLRFPQCSHQ*PSLAGL Trigger: GAGTCCTGCAAGACTGGGTCATTGATGACTGCATTG...TGGGAATCTGAGGTGTTGTATACGTAATGATAAACATGATTTTAGTAAGCAGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034204.11 |
||
| CDS-3UTR CCA 90 bp | GCTAATGAACACTGCCACATGTTTCCACCACTATCTCGGTCATATTCATTTTACAGGAGGTTCAAAATTTaGTCTCCACCAGTTCCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: ANEHCHMFPPLSRSYSFYRRFKI*SPPVPN Trigger: ATTGGGAACTGGTGGAGACCAAATTTTGAACCTCCT...GTAAAATGAATATGACCGAGATAGTGGTGGAAACATGTGGCAGTGTTCATTAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034204.11 ENSMUST00000212622.2 ENSMUST00000212981.2 |
||
| CDS-3UTR CCA 90 bp | GTTTCCACCACTATCTCGGTCATATTCATTTTACTCTTCAAACAGGAAGGTGGTATACAGCTCAAACAATaGTGCAGCTACCAGCTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: VSTTISVIFILLFKQEGGIQLKQ*CSYQLV Trigger: TACAAGCTGGTAGCTGCACCATTGTTTGAGCTGTAT...ACCACCTTCCTGTTTGAAGAGTAAAATGAATATGACCGAGATAGTGGTGGAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034204.11 ENSMUST00000212981.2 |
||
| CDS-3UTR GCA 90 bp | GCCAAAGCTTTGCTTTCTCAACACGCTGCTCTTCTCTCAATGGAACAGTATAATGGGTTTTGTTATATGTaGAGGAATATACGGATACTG | + |
|
Preference number: 4 (lower is better) Translates to: AKALLSQHAALLSMEQYNGFCYM*RNIRIL Trigger: CAGTATCCGTATATTCCTGCACATATAACAAAACCC...ATTATACTGTTCCATTGAGAGAAGAGCAGCGTGTTGAGAAAGCAAAGCTTTGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034204.11 |
||
| 3UTR CAA 72 bp | AAAGTTGCTGTTTTCCTTGGGCTGACAAAACTTGTCTaGACCTCTAGAATCCAGTTGATTCAGACTATTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KVAVFLGLTKLV*TSRIQLIQTIP Trigger: AGGAATAGTCTGAATCAACTGGATTCTAGAGGTCAAGACAAGTTTTGTCAGCCCAAGGAAAACAGCAACTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034204.11 |
||
| CDS-3UTR GCA 90 bp | GCTAATGAACACTGCCACATGTTTCCACCACTATCTCGGTCATATTCATTTTACGGGTTTTGTTATATGTaGAGGAATATACGGATACTG | + |
|
Preference number: 4 (lower is better) Translates to: ANEHCHMFPPLSRSYSFYGFCYM*RNIRIL Trigger: CAGTATCCGTATATTCCTGCACATATAACAAAACCC...GTAAAATGAATATGACCGAGATAGTGGTGGAAACATGTGGCAGTGTTCATTAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034204.11 ENSMUST00000212622.2 ENSMUST00000212981.2 |
||
| 3UTR CAA 72 bp | GGGCTGACAAAACTTGTCTTGACCTCTAGAATCCAGTaGATTCAGACTATTCCTTTGTTTCTATTATTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: GLTKLVLTSRIQ*IQTIPLFLLFL Trigger: CAAAAATAATAGAAACAAAGGAATAGTCTGAATCAACTGGATTCTAGAGGTCAAGACAAGTTTTGTCAGCCC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034204.11 |
||
| CDS-3UTR CAA 90 bp | ACCAGGATGGCCTCAAAACTCAGAAATCCGCCTGCCTCTGCCTCCCCAGTGCTGCCATACCCCGGTGCATaGTCATACAGCTCAAACAAT | + |
|
Preference number: 5 (lower is better) Translates to: TRMASKLRNPPASASPVLPYPGA*SYSSNN Trigger: ATTGTTTGAGCTGTATGACAATGCACCGGGGTATGG...CAGCACTGGGGAGGCAGAGGCAGGCGGATTTCTGAGTTTTGAGGCCATCCTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034204.11 |
||
| CDS-3UTR CAA 90 bp | CAGCACTCTGAATCTCAGGTAGGCCGTTTACACTTCTCCACTCTCCCAGAACATTCCAGGGTGAGGGGCTaGGTCTGCTGGATGTACTTG | + |
|
Preference number: 5 (lower is better) Translates to: QHSESQVGRLHFSTLPEHSRVRG*VCWMYL Trigger: CAAGTACATCCAGCAGACCAAGCCCCTCACCCTGGA...ATGTTCTGGGAGAGTGGAGAAGTGTAAACGGCCTACCTGAGATTCAGAGTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034204.11 |
||
| CDS-3UTR CAA 90 bp | AGGCCGTTTACACTTCTCCACTCTCCCAGAACATTAACACGAACACCTGAAACCTGCTGGATGTACTTGTaGCCGAACTGGTTGACCCCC | + |
|
Preference number: 5 (lower is better) Translates to: RPFTLLHSPRTLTRTPETCWMYL*PNWLTP Trigger: GGGGGTCAACCAGTTCGGCAACAAGTACATCCAGCA...GGTTTCAGGTGTTCGTGTTAATGTTCTGGGAGAGTGGAGAAGTGTAAACGGCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034204.11 |
||
| CDS-3UTR CAA 90 bp | AGGCCGTTTACACTTCTCCACTCTCCCAGAACATTAACACGAACACCTGAAACCATCAATGACCCAGTCTaGCAGGACTCCATCTTGACG | + |
|
Preference number: 5 (lower is better) Translates to: RPFTLLHSPRTLTRTPETINDPV*QDSILT Trigger: CGTCAAGATGGAGTCCTGCAAGACTGGGTCATTGAT...GGTTTCAGGTGTTCGTGTTAATGTTCTGGGAGAGTGGAGAAGTGTAAACGGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034204.11 |
||
| CDS GCA 90 bp | GTGGCTCCGGATGTCTTTAATTTGACATCTTACAAAGTTCAACTCTaGATACCTGCTCAGCAGCTGAGGAAGACTAGAAATGATGGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: VAPDVFNLTSYKVQL*IPAQQLRKTRNDGS Trigger: GGACCCATCATTTCTAGTCTTCCTCAGCTGCTGAGCAGGTATGCAGAGTTGAACTTTGTAAGATGTCAAATTAAAGACATCCGGAGCCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212911.2 |
||
| CDS-3UTR CAA 90 bp | GCTAATGAACACTGCCACATGTTTCCACCACTATCTCGGTCATATTCATTTTACGTCTGCTGGATGTACTaGTTGCCGAACTGGTTGACC | + |
|
Preference number: 5 (lower is better) Translates to: ANEHCHMFPPLSRSYSFYVCWMY*LPNWLT Trigger: GGTCAACCAGTTCGGCAACAAGTACATCCAGCAGAC...GTAAAATGAATATGACCGAGATAGTGGTGGAAACATGTGGCAGTGTTCATTAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034204.11 |
||
| CDS-3UTR CAA 90 bp | GCTAATGAACACTGCCACATGTTTCCACCACTATCTCGGTCATATTCATTTTACTCCCCACCAGGTAATTaGAAGAAAGTTGTCCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: ANEHCHMFPPLSRSYSFYSPPGN*KKVVPS Trigger: GCTGGGGACAACTTTCTTCAAATTACCTGGTGGGGA...GTAAAATGAATATGACCGAGATAGTGGTGGAAACATGTGGCAGTGTTCATTAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000034204.11 ENSMUST00000212622.2 ENSMUST00000212981.2 |
||
| CDS-3UTR CAA 90 bp | GCTAATGAACACTGCCACATGTTTCCACCACTATCTCGGTCATATTCATTTTACATCAATGACCCAGTCTaGCAGGACTCCATCTTGACG | + |
|
Preference number: 5 (lower is better) Translates to: ANEHCHMFPPLSRSYSFYINDPV*QDSILT Trigger: CGTCAAGATGGAGTCCTGCAAGACTGGGTCATTGAT...GTAAAATGAATATGACCGAGATAGTGGTGGAAACATGTGGCAGTGTTCATTAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034204.11 ENSMUST00000212622.2 ENSMUST00000212981.2 |
||
| CDS-3UTR CAA 90 bp | TTTCCACCACTATCTCGGTCATATTCATTTTACTCTTCAAACAGGAAGGTGGTGATCAATGACCCAGTCTaGCAGGACTCCATCTTGACG | + |
|
Preference number: 5 (lower is better) Translates to: FPPLSRSYSFYSSNRKVVINDPV*QDSILT Trigger: CGTCAAGATGGAGTCCTGCAAGACTGGGTCATTGAT...CACCACCTTCCTGTTTGAAGAGTAAAATGAATATGACCGAGATAGTGGTGGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034204.11 ENSMUST00000212981.2 |
||
| CDS-3UTR CAA 90 bp | GCTAATGAACACTGCCACATGTTTCCACCACTATCTCGGTCATATTCATTTTACGAGGAGGTTCAAAATTaGGTCTCCACCAGTTCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: ANEHCHMFPPLSRSYSFYEEVQN*VSTSSQ Trigger: TTGGGAACTGGTGGAGACCAAATTTTGAACCTCCTC...GTAAAATGAATATGACCGAGATAGTGGTGGAAACATGTGGCAGTGTTCATTAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034204.11 ENSMUST00000212622.2 ENSMUST00000212981.2 |
||
| CDS-3UTR CAA 90 bp | GAACACTGCCACATGTTTCCACCACTATCTCGGTCATATTCATTTTACTCTTCAGAGGAGGTTCAAAATTaGGTCTCCACCAGTTCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: EHCHMFPPLSRSYSFYSSEEVQN*VSTSSQ Trigger: TTGGGAACTGGTGGAGACCAAATTTTGAACCTCCTC...TGAAGAGTAAAATGAATATGACCGAGATAGTGGTGGAAACATGTGGCAGTGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034204.11 ENSMUST00000212981.2 |
||
| CDS-3UTR CAA 90 bp | GCTAATGAACACTGCCACATGTTTCCACCACTATCTCGGTCATATTCATTTTACCCATACCCCGGTGCATaGTCATACAGCTCAAACAAT | + |
|
Preference number: 5 (lower is better) Translates to: ANEHCHMFPPLSRSYSFYPYPGA*SYSSNN Trigger: ATTGTTTGAGCTGTATGACAATGCACCGGGGTATGG...GTAAAATGAATATGACCGAGATAGTGGTGGAAACATGTGGCAGTGTTCATTAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034204.11 ENSMUST00000212981.2 |
||
| CDS-3UTR CAA 90 bp | TGCTGCTTACTAAAATCATGTTTATCATTACGTATACAACACCTCAGATTCCCATCCCCACCAGGTAATTaGAAGAAAGTTGTCCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: CCLLKSCLSLRIQHLRFPSPPGN*KKVVPS Trigger: GCTGGGGACAACTTTCTTCAAATTACCTGGTGGGGA...TGGGAATCTGAGGTGTTGTATACGTAATGATAAACATGATTTTAGTAAGCAGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034204.11 |
||
| CDS-3UTR CAA 90 bp | TGCTGCTTACTAAAATCATGTTTATCATTACGTATACAACACCTCAGATTCCCAGAGGAGGTTCAAAATTaGGTCTCCACCAGTTCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: CCLLKSCLSLRIQHLRFPEEVQN*VSTSSQ Trigger: TTGGGAACTGGTGGAGACCAAATTTTGAACCTCCTC...TGGGAATCTGAGGTGTTGTATACGTAATGATAAACATGATTTTAGTAAGCAGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034204.11 |
||
| CDS TCA 72 bp | AGCTGCAGCAGGAGCACGTGGGGCAGGCGGTGTTCATaGACAATCAGAACCCCTTCTACAGTCCTTCTCATC | + |
|
Preference number: 6 (lower is better) Translates to: SCSRSTWGRRCS*TIRTPSTVLLI Trigger: GATGAGAAGGACTGTAGAAGGGGTTCTGATTGTTCATGAACACCGCCTGCCCCACGTGCTCCTGCTGCAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034204.11 ENSMUST00000212622.2 ENSMUST00000212981.2 |
||
| CDS TCA 72 bp | CTATCACTTCTCAAGTGGCTCCGGATGTCTTTAATTTaGCATCTTACAAAGTTCAACTCTGCATACCTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: LSLLKWLRMSLI*HLTKFNSAYLL Trigger: GAGCAGGTATGCAGAGTTGAACTTTGTAAGATGTCAAATTAAAGACATCCGGAGCCACTTGAGAAGTGATAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212911.2 |
||
| CDS CAA 72 bp | ACTATCACTTCTCAAGTGGCTCCGGATGTCTTTAATTaGACATCTTACAAAGTTCAACTCTGCATACCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: TITSQVAPDVFN*TSYKVQLCIPA Trigger: AGCAGGTATGCAGAGTTGAACTTTGTAAGATGTCAAATTAAAGACATCCGGAGCCACTTGAGAAGTGATAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212911.2 |
||
| CDS GCA 72 bp | GATGTCTTTAATTTGACATCTTACAAAGTTCAACTCTaGATACCTGCTCAGCAGCTGAGGAAGACTAGAAAT | + |
|
Preference number: 6 (lower is better) Translates to: DVFNLTSYKVQL*IPAQQLRKTRN Trigger: ATTTCTAGTCTTCCTCAGCTGCTGAGCAGGTATGCAGAGTTGAACTTTGTAAGATGTCAAATTAAAGACATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212911.2 |
||