Pregenerated sensors for NUDT19 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034875Ensembl transcript IDs: ENSMUST00000040962.6
Found 57 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCTGACCCTCAGCACTCTTTAACTAGGTATCTCGGAATCAATTCCTaGGAAAGTGTAAGAGAGCCAGGGCTCAGTCTCCACAGCGCACCA | + |
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Preference number: 1 (lower is better) Translates to: SDPQHSLTRYLGINS*ESVREPGLSLHSAP Trigger: TGGTGCGCTGTGGAGACTGAGCCCTGGCTCTCTTACACTTTCGCAGGAATTGATTCCGAGATACCTAGTTAAAGAGTGCTGAGGGTCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040962.6 |
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| 3UTR GCA 90 bp | GGCAAAGTCTGCTCGCATCTCCTCAGATGGAGAAACAAAGGACCCTaGTGGCACAGAGTTAAGACTCGATCCCTCAAGACCCTAGCTAAA | + |
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Preference number: 1 (lower is better) Translates to: GKVCSHLLRWRNKGP*WHRVKTRSLKTLAK Trigger: TTTAGCTAGGGTCTTGAGGGATCGAGTCTTAACTCTGTGCCAGCAGGGTCCTTTGTTTCTCCATCTGAGGAGATGCGAGCAGACTTTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040962.6 |
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| 3UTR CCA 90 bp | TTCATCTTGGTGACAAGAGCTTTACTACTTCGTCCATTCTACATTTaGCTTGCTGTGCAGTCTGACAAATGGCAGAGGCTCCCAAAACAC | + |
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Preference number: 1 (lower is better) Translates to: FILVTRALLLRPFYI*LAVQSDKWQRLPKH Trigger: GTGTTTTGGGAGCCTCTGCCATTTGTCAGACTGCACAGCAAGCCAAATGTAGAATGGACGAAGTAGTAAAGCTCTTGTCACCAAGATGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040962.6 |
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| 3UTR TCA 90 bp | ATCAAGTTGATTCTATGGCACGACCATGACATCCCCTTTGAAGGATaGTCACTGTTTATTTATATTAACTTTCCTTACTGTGATCAAAAG | + |
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Preference number: 1 (lower is better) Translates to: IKLILWHDHDIPFEG*SLFIYINFPYCDQK Trigger: CTTTTGATCACAGTAAGGAAAGTTAATATAAATAAACAGTGATCATCCTTCAAAGGGGATGTCATGGTCGTGCCATAGAATCAACTTGAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040962.6 |
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| 3UTR-3UTR TCA 90 bp | TGTAAGAGAGCCAGGGCTCAGTCTCCACAGCGCACCAGGAAACCTGCTAACGCGAACCGTTCATCTTGGTaGCAAGAGCTTTACTACTTC | + |
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Preference number: 2 (lower is better) Translates to: CKRARAQSPQRTRKPANANRSSW*QELYYF Trigger: GAAGTAGTAAAGCTCTTGTCACCAAGATGAACGGTT...CGCGTTAGCAGGTTTCCTGGTGCGCTGTGGAGACTGAGCCCTGGCTCTCTTACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040962.6 |
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| 3UTR-3UTR CCA 90 bp | GGAGAAACAAAGGACCCTGCTGGCACAGAGTTAAGACTCGATCCCTCAAGACCCGGGACAGTTAGAGGATaGCAGGAGACCACTTTCCAA | + |
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Preference number: 2 (lower is better) Translates to: GETKDPAGTELRLDPSRPGTVRG*QETTFQ Trigger: TTGGAAAGTGGTCTCCTGCCATCCTCTAACTGTCCC...GGGTCTTGAGGGATCGAGTCTTAACTCTGTGCCAGCAGGGTCCTTTGTTTCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040962.6 |
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| 3UTR-3UTR CCA 90 bp | CCTCAGTTTTCACAACCTGCCAAAATGGCTACCAACCAGGGAGCAAGTGGGAGTGTGCAGTCTGACAAATaGCAGAGGCTCCCAAAACAC | + |
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Preference number: 2 (lower is better) Translates to: PQFSQPAKMATNQGASGSVQSDK*QRLPKH Trigger: GTGTTTTGGGAGCCTCTGCCATTTGTCAGACTGCAC...ACTCCCACTTGCTCCCTGGTTGGTAGCCATTTTGGCAGGTTGTGAAAACTGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040962.6 |
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| 3UTR-3UTR CCA 90 bp | TATCTCGGAATCAATTCCTGCGAAAGTGTAAGAGAGCCAGGGCTCAGTCTCCACCGTCCATTCTACATTTaGCTTGCTGTGCAGTCTGAC | + |
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Preference number: 2 (lower is better) Translates to: YLGINSCESVREPGLSLHRPFYI*LAVQSD Trigger: GTCAGACTGCACAGCAAGCCAAATGTAGAATGGACG...GTGGAGACTGAGCCCTGGCTCTCTTACACTTTCGCAGGAATTGATTCCGAGATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040962.6 |
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| 3UTR-3UTR TCA 90 bp | ACTTTCCAATGTTCAACTAATAAAACAACTGTCGTGAAACCGTTCATCTTGGTGGGTAACACCTCATTGTaGCTTTTATGGGTACATTCC | + |
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Preference number: 2 (lower is better) Translates to: TFQCSTNKTTVVKPFILVGNTSL*LLWVHS Trigger: GGAATGTACCCATAAAAGTCACAATGAGGTGTTACC...CACCAAGATGAACGGTTTCACGACAGTTGTTTTATTAGTTGAACATTGGAAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040962.6 |
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| 3UTR CCA 72 bp | TCGCATCTCCTCAGATGGAGAAACAAAGGACCCTGCTaGCACAGAGTTAAGACTCGATCCCTCAAGACCCTA | + |
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Preference number: 3 (lower is better) Translates to: SHLLRWRNKGPC*HRVKTRSLKTL Trigger: TAGGGTCTTGAGGGATCGAGTCTTAACTCTGTGCCAGCAGGGTCCTTTGTTTCTCCATCTGAGGAGATGCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040962.6 |
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| 3UTR GCA 72 bp | GTTAAGACTCGATCCCTCAAGACCCTAGCTAAAGCCTaGCCCTCAGTTTTCACAACCTGCCAAAATGGCTAC | + |
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Preference number: 3 (lower is better) Translates to: VKTRSLKTLAKA*PSVFTTCQNGY Trigger: GTAGCCATTTTGGCAGGTTGTGAAAACTGAGGGGCAGGCTTTAGCTAGGGTCTTGAGGGATCGAGTCTTAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040962.6 |
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| 3UTR GCA 72 bp | CAGCACTCTTTAACTAGGTATCTCGGAATCAATTCCTaGGAAAGTGTAAGAGAGCCAGGGCTCAGTCTCCAC | + |
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Preference number: 3 (lower is better) Translates to: QHSLTRYLGINS*ESVREPGLSLH Trigger: GTGGAGACTGAGCCCTGGCTCTCTTACACTTTCGCAGGAATTGATTCCGAGATACCTAGTTAAAGAGTGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040962.6 |
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| 3UTR TCA 72 bp | ACTTCGTCCATTCTACATTTGGCTTGCTGTGCAGTCTaGCAAATGGCAGAGGCTCCCAAAACACACATGACA | + |
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Preference number: 3 (lower is better) Translates to: TSSILHLACCAV*QMAEAPKTHMT Trigger: TGTCATGTGTGTTTTGGGAGCCTCTGCCATTTGTCAGACTGCACAGCAAGCCAAATGTAGAATGGACGAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040962.6 |
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| 3UTR CCA 72 bp | GTGACAAGAGCTTTACTACTTCGTCCATTCTACATTTaGCTTGCTGTGCAGTCTGACAAATGGCAGAGGCTC | + |
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Preference number: 3 (lower is better) Translates to: VTRALLLRPFYI*LAVQSDKWQRL Trigger: GAGCCTCTGCCATTTGTCAGACTGCACAGCAAGCCAAATGTAGAATGGACGAAGTAGTAAAGCTCTTGTCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040962.6 |
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| 3UTR CCA 72 bp | CCAGGAAACCTGCTAACGCGTGGGACAGTTAGAGGATaGCAGGAGACCACTTTCCAATGTTCAACTAATAAA | + |
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Preference number: 3 (lower is better) Translates to: PGNLLTRGTVRG*QETTFQCSTNK Trigger: TTTATTAGTTGAACATTGGAAAGTGGTCTCCTGCCATCCTCTAACTGTCCCACGCGTTAGCAGGTTTCCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040962.6 |
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| 3UTR TCA 72 bp | ATTCTATGGCACGACCATGACATCCCCTTTGAAGGATaGTCACTGTTTATTTATATTAACTTTCCTTACTGT | + |
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Preference number: 3 (lower is better) Translates to: ILWHDHDIPFEG*SLFIYINFPYC Trigger: ACAGTAAGGAAAGTTAATATAAATAAACAGTGATCATCCTTCAAAGGGGATGTCATGGTCGTGCCATAGAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040962.6 |
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| CDS-3UTR CCA 90 bp | GGAGAAACAAAGGACCCTGCTGGCACAGAGTTAAGACTCGATCCCTCAAGACCCGGGCTCCTGAGAAGCTaGAGCCGCGTCCCGCGGCCG | + |
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Preference number: 4 (lower is better) Translates to: GETKDPAGTELRLDPSRPGLLRS*SRVPRP Trigger: CGGCCGCGGGACGCGGCTCCAGCTTCTCAGGAGCCC...GGGTCTTGAGGGATCGAGTCTTAACTCTGTGCCAGCAGGGTCCTTTGTTTCTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040962.6 |
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| CDS-3UTR CCA 90 bp | GTCTGCTCGCATCTCCTCAGATGGAGAAACAAAGGACCCTGCTGGCACAGAGTTCCGGCCGGGCTCGAGTaGGTCCAGCCTGCTGCCAAC | + |
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Preference number: 4 (lower is better) Translates to: VCSHLLRWRNKGPCWHRVPAGLE*VQPAAN Trigger: GTTGGCAGCAGGCTGGACCCACTCGAGCCCGGCCGG...AACTCTGTGCCAGCAGGGTCCTTTGTTTCTCCATCTGAGGAGATGCGAGCAGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040962.6 |
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| CDS-3UTR CCA 90 bp | GTCTGCTCGCATCTCCTCAGATGGAGAAACAAAGGACCCTGCTGGCACAGAGTTAGGTGCGCACACAGCTaGAGGAAGCAGCGCGGGTCA | + |
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Preference number: 4 (lower is better) Translates to: VCSHLLRWRNKGPCWHRVRCAHS*RKQRGS Trigger: TGACCCGCGCTGCTTCCTCCAGCTGTGTGCGCACCT...AACTCTGTGCCAGCAGGGTCCTTTGTTTCTCCATCTGAGGAGATGCGAGCAGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040962.6 |
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| CDS-3UTR CCA 90 bp | TGTAAGAGAGCCAGGGCTCAGTCTCCACAGCGCACCAGGAAACCTGCTAACGCGATACAGCTCATCTCCTaGGAGAAGATGGATGGTGCC | + |
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Preference number: 4 (lower is better) Translates to: CKRARAQSPQRTRKPANAIQLIS*EKMDGA Trigger: GGCACCATCCATCTTCTCCCAGGAGATGAGCTGTAT...CGCGTTAGCAGGTTTCCTGGTGCGCTGTGGAGACTGAGCCCTGGCTCTCTTACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040962.6 |
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| CDS-3UTR CCA 90 bp | ACATTTGGCTTGCTGTGCAGTCTGACAAATGGCAGAGGCTCCCAAAACACACATCGAAGGCTTCGCGGATaGCACAGATGCGCAGCGCTA | + |
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Preference number: 4 (lower is better) Translates to: TFGLLCSLTNGRGSQNTHRRLRG*HRCAAL Trigger: TAGCGCTGCGCATCTGTGCCATCCGCGAAGCCTTCG...ATGTGTGTTTTGGGAGCCTCTGCCATTTGTCAGACTGCACAGCAAGCCAAATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040962.6 |
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| CDS-3UTR GCA 90 bp | CAAATGGCAGAGGCTCCCAAAACACACATGACACAGGTAACACCTCATTGTGACCCCAGATGTCAGGCGTaGAGTCTAGGTGCGCACACA | + |
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Preference number: 4 (lower is better) Translates to: QMAEAPKTHMTQVTPHCDPRCQA*SLGAHT Trigger: TGTGTGCGCACCTAGACTGCACGCCTGACATCTGGG...GTCACAATGAGGTGTTACCTGTGTCATGTGTGTTTTGGGAGCCTCTGCCATTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040962.6 |
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| CDS-3UTR CCA 90 bp | AGTCTGACAAATGGCAGAGGCTCCCAAAACACACATGACACAGGTAACACCTCAAGCACAGGAAGAAGGTaGTGTCGAAACGGCGGATGG | + |
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Preference number: 4 (lower is better) Translates to: SLTNGRGSQNTHDTGNTSSTGRR*CRNGGW Trigger: CCATCCGCCGTTTCGACACCACCTTCTTCCTGTGCT...TGAGGTGTTACCTGTGTCATGTGTGTTTTGGGAGCCTCTGCCATTTGTCAGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040962.6 |
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| CDS-3UTR CCA 90 bp | GGAGAAACAAAGGACCCTGCTGGCACAGAGTTAAGACTCGATCCCTCAAGACCCCTGGGAGAAGATGGATaGTGCCATCAGAAGTTAAAA | + |
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Preference number: 4 (lower is better) Translates to: GETKDPAGTELRLDPSRPLGEDG*CHQKLK Trigger: TTTTAACTTCTGATGGCACCATCCATCTTCTCCCAG...GGGTCTTGAGGGATCGAGTCTTAACTCTGTGCCAGCAGGGTCCTTTGTTTCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040962.6 |
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| CDS-3UTR GCA 90 bp | GGCACGACCATGACATCCCCTTTGAAGGATGATCACTGTTTATTTATATTAACTGGCGTGCAGTCTAGGTaGGCACACAGCTGGAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: GTTMTSPLKDDHCLFILTGVQSR*AHSWRK Trigger: CTTCCTCCAGCTGTGTGCGCACCTAGACTGCACGCC...AGTTAATATAAATAAACAGTGATCATCCTTCAAAGGGGATGTCATGGTCGTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040962.6 |
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| CDS-3UTR GCA 90 bp | AGTCTGACAAATGGCAGAGGCTCCCAAAACACACATGACACAGGTAACACCTCAGGAGAAGATGGATGGTaGCATCAGAAGTTAAAAGTA | + |
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Preference number: 4 (lower is better) Translates to: SLTNGRGSQNTHDTGNTSGEDGW*HQKLKV Trigger: TACTTTTAACTTCTGATGGCACCATCCATCTTCTCC...TGAGGTGTTACCTGTGTCATGTGTGTTTTGGGAGCCTCTGCCATTTGTCAGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040962.6 |
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| 3UTR CAA 72 bp | TCAACTAATAAAACAACTGTCGTGAAACCGTTCATCTaGGTGACAAGAGCTTTACTACTTCGTCCATTCTAC | + |
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Preference number: 4 (lower is better) Translates to: STNKTTVVKPFI*VTRALLLRPFY Trigger: GTAGAATGGACGAAGTAGTAAAGCTCTTGTCACCAAGATGAACGGTTTCACGACAGTTGTTTTATTAGTTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040962.6 |
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| CDS TCA 90 bp | GCGCGGCGGCGTGTGCCGAGGCGCGAACAGACGCACCCAGTCGGGTaGGCTGTCGGCCGCGTCCAGCACGCCGCCCGGGAAGACGTGCGC | + |
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Preference number: 5 (lower is better) Translates to: ARRRVPRREQTHPVG*AVGRVQHAAREDVR Trigger: GCGCACGTCTTCCCGGGCGGCGTGCTGGACGCGGCCGACAGCTCACCCGACTGGGTGCGTCTGTTCGCGCCTCGGCACACGCCGCCGCGC 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040962.6 |
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| CDS GCA 90 bp | GGTTGCCGAGGGGGCTCCGGGCCTAGGCCGAAGCGCGGCGGCGTGTaGCGAGGCGCGAACAGACGCACCCAGTCGGGTGAGCTGTCGGCC | + |
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Preference number: 5 (lower is better) Translates to: GCRGGSGPRPKRGGV*RGANRRTQSGELSA Trigger: GGCCGACAGCTCACCCGACTGGGTGCGTCTGTTCGCGCCTCGGCACACGCCGCCGCGCTTCGGCCTAGGCCCGGAGCCCCCTCGGCAACC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040962.6 |
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| CDS GCA 90 bp | GGAGCAGCACCCCCGCCTCCTCGAAGGCTTCGCGGATGGCACAGATaGGCAGCGCTACGTCATCGGGCAGCGCCGCGGGGTCCGCGTCGC | + |
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Preference number: 5 (lower is better) Translates to: GAAPPPPRRLRGWHR*AALRHRAAPRGPRR Trigger: GCGACGCGGACCCCGCGGCGCTGCCCGATGACGTAGCGCTGCGCATCTGTGCCATCCGCGAAGCCTTCGAGGAGGCGGGGGTGCTGCTCC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040962.6 |
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| CDS GCA 90 bp | AAGCAGCAGCCGGAAGCCGGCCGGGCTCGAGTGGGTCCAGCCTGCTaGCAACATCACGGTGGCTGCCCGCCGCCAGCTGCTCGAGCTGCT | + |
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Preference number: 5 (lower is better) Translates to: KQQPEAGRARVGPAC*QHHGGCPPPAARAA Trigger: AGCAGCTCGAGCAGCTGGCGGCGGGCAGCCACCGTGATGTTGGCAGCAGGCTGGACCCACTCGAGCCCGGCCGGCTTCCGGCTGCTGCTT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040962.6 |
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| CDS GCA 90 bp | GCCGCCCGGGAAGACGTGCGCGCCGGGCAAGAAGCGCTGGTTTTGTaGTCGCTGGAGAAGCAGCAGCCGGAAGCCGGCCGGGCTCGAGTG | + |
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Preference number: 5 (lower is better) Translates to: AAREDVRAGQEALVL*SLEKQQPEAGRARV Trigger: CACTCGAGCCCGGCCGGCTTCCGGCTGCTGCTTCTCCAGCGAGCACAAAACCAGCGCTTCTTGCCCGGCGCGCACGTCTTCCCGGGCGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040962.6 |
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| CDS GCA 90 bp | TGCAGTCTAGGTGCGCACACAGCTGGAGGAAGCAGCGCGGGTCACTaGGCACGCGCGAGCGCCATTCGGCCAGGCCGGCCGGAGGCGACA | + |
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Preference number: 5 (lower is better) Translates to: CSLGAHTAGGSSAGH*ARASAIRPGRPEAT Trigger: TGTCGCCTCCGGCCGGCCTGGCCGAATGGCGCTCGCGCGTGCGCAGTGACCCGCGCTGCTTCCTCCAGCTGTGTGCGCACCTAGACTGCA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040962.6 |
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| CDS CCA 90 bp | TGTGCTCGCTGGAGAAGCAGCAGCCGGAAGCCGGCCGGGCTCGAGTaGGTCCAGCCTGCTGCCAACATCACGGTGGCTGCCCGCCGCCAG | + |
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Preference number: 5 (lower is better) Translates to: CARWRSSSRKPAGLE*VQPAANITVAARRQ Trigger: CTGGCGGCGGGCAGCCACCGTGATGTTGGCAGCAGGCTGGACCCACTCGAGCCCGGCCGGCTTCCGGCTGCTGCTTCTCCAGCGAGCACA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040962.6 |
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| CDS CCA 90 bp | TCCAGCACGCCGCCCGGGAAGACGTGCGCGCCGGGCAAGAAGCGCTaGTTTTGTGCTCGCTGGAGAAGCAGCAGCCGGAAGCCGGCCGGG | + |
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Preference number: 5 (lower is better) Translates to: SSTPPGKTCAPGKKR*FCARWRSSSRKPAG Trigger: CCCGGCCGGCTTCCGGCTGCTGCTTCTCCAGCGAGCACAAAACCAGCGCTTCTTGCCCGGCGCGCACGTCTTCCCGGGCGGCGTGCTGGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040962.6 |
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| CDS CCA 90 bp | GGGAAGACGTGCGCGCCGGGCAAGAAGCGCTGGTTTTGTGCTCGCTaGAGAAGCAGCAGCCGGAAGCCGGCCGGGCTCGAGTGGGTCCAG | + |
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Preference number: 5 (lower is better) Translates to: GKTCAPGKKRWFCAR*RSSSRKPAGLEWVQ Trigger: CTGGACCCACTCGAGCCCGGCCGGCTTCCGGCTGCTGCTTCTCCAGCGAGCACAAAACCAGCGCTTCTTGCCCGGCGCGCACGTCTTCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040962.6 |
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| CDS-3UTR CAA 90 bp | AGAAGAAACAAGGGACCTTCCTGGAGGCAGAAACCTGAGGCAAAGTCTGCTCGCATAGGAAACATTCAGTaGCCTCTGATGGGGACAACC | + |
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Preference number: 5 (lower is better) Translates to: RRNKGPSWRQKPEAKSARIGNIQ*PLMGTT Trigger: GGTTGTCCCCATCAGAGGCAACTGAATGTTTCCTAT...GCGAGCAGACTTTGCCTCAGGTTTCTGCCTCCAGGAAGGTCCCTTGTTTCTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040962.6 |
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| CDS TCA 90 bp | TCTCTTATTCACTATGTAGTTCCTAGGGTACACGTGCTTATTCTCTaGCGGAAGAGTCATGTAGATTTCGTACACATAGGGACTGTGGAT | + |
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Preference number: 5 (lower is better) Translates to: SLIHYVVPRVHVLIL*RKSHVDFVHIGTVD Trigger: ATCCACAGTCCCTATGTGTACGAAATCTACATGACTCTTCCGTCAGAGAATAAGCACGTGTACCCTAGGAACTACATAGTGAATAAGAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040962.6 |
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| CDS CCA 90 bp | AAGAAGTCTGAGTCTTTCACATACAGCTCATCTCCTGGGAGAAGATaGATGGTGCCATCAGAAGTTAAAAGTATTATTGGCAGCCATTTC | + |
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Preference number: 5 (lower is better) Translates to: KKSESFTYSSSPGRR*MVPSEVKSIIGSHF Trigger: GAAATGGCTGCCAATAATACTTTTAACTTCTGATGGCACCATCCATCTTCTCCCAGGAGATGAGCTGTATGTGAAAGACTCAGACTTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040962.6 |
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| CDS-3UTR CAA 90 bp | GGCACGACCATGACATCCCCTTTGAAGGATGATCACTGTTTATTTATATTAACTCCAGCCAGATTTCTTTaGATAGGAAACATTCAGTTG | + |
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Preference number: 5 (lower is better) Translates to: GTTMTSPLKDDHCLFILTPARFL*IGNIQL Trigger: CAACTGAATGTTTCCTATCAAAAGAAATCTGGCTGG...AGTTAATATAAATAAACAGTGATCATCCTTCAAAGGGGATGTCATGGTCGTGCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040962.6 |
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| CDS GCA 72 bp | GGGGGCTCCGGGCCTAGGCCGAAGCGCGGCGGCGTGTaGCGAGGCGCGAACAGACGCACCCAGTCGGGTGAG | + |
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Preference number: 6 (lower is better) Translates to: GGSGPRPKRGGV*RGANRRTQSGE Trigger: CTCACCCGACTGGGTGCGTCTGTTCGCGCCTCGGCACACGCCGCCGCGCTTCGGCCTAGGCCCGGAGCCCCC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040962.6 |
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| CDS GCA 72 bp | GGTGCGCACACAGCTGGAGGAAGCAGCGCGGGTCACTaGGCACGCGCGAGCGCCATTCGGCCAGGCCGGCCG | + |
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Preference number: 6 (lower is better) Translates to: GAHTAGGSSAGH*ARASAIRPGRP Trigger: CGGCCGGCCTGGCCGAATGGCGCTCGCGCGTGCGCAGTGACCCGCGCTGCTTCCTCCAGCTGTGTGCGCACC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040962.6 |
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| CDS CCA 72 bp | CGGAGGCGACAGCGCCTGACTGGGCTCCTGAGAAGCTaGAGCCGCGTCCCGCGGCCGCAGGAGCAGCACCCC | + |
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Preference number: 6 (lower is better) Translates to: RRRQRLTGLLRS*SRVPRPQEQHP Trigger: GGGGTGCTGCTCCTGCGGCCGCGGGACGCGGCTCCAGCTTCTCAGGAGCCCAGTCAGGCGCTGTCGCCTCCG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040962.6 |
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| CDS TCA 72 bp | CGTGTGCCGAGGCGCGAACAGACGCACCCAGTCGGGTaGGCTGTCGGCCGCGTCCAGCACGCCGCCCGGGAA | + |
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Preference number: 6 (lower is better) Translates to: RVPRREQTHPVG*AVGRVQHAARE Trigger: TTCCCGGGCGGCGTGCTGGACGCGGCCGACAGCTCACCCGACTGGGTGCGTCTGTTCGCGCCTCGGCACACG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040962.6 |
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| CDS GCA 72 bp | CCCCCGCCTCCTCGAAGGCTTCGCGGATGGCACAGATaGGCAGCGCTACGTCATCGGGCAGCGCCGCGGGGT | + |
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Preference number: 6 (lower is better) Translates to: PPPPRRLRGWHR*AALRHRAAPRG Trigger: ACCCCGCGGCGCTGCCCGATGACGTAGCGCTGCGCATCTGTGCCATCCGCGAAGCCTTCGAGGAGGCGGGGG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040962.6 |
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| CDS CAA 90 bp | CACGCCGCCCGGGAAGACGTGCGCGCCGGGCAAGAAGCGCTGGTTTaGTGCTCGCTGGAGAAGCAGCAGCCGGAAGCCGGCCGGGCTCGA | + |
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Preference number: 6 (lower is better) Translates to: HAAREDVRAGQEALV*CSLEKQQPEAGRAR Trigger: TCGAGCCCGGCCGGCTTCCGGCTGCTGCTTCTCCAGCGAGCACAAAACCAGCGCTTCTTGCCCGGCGCGCACGTCTTCCCGGGCGGCGTG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040962.6 |
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| CDS CCA 72 bp | TGGAGAAGCAGCAGCCGGAAGCCGGCCGGGCTCGAGTaGGTCCAGCCTGCTGCCAACATCACGGTGGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: WRSSSRKPAGLE*VQPAANITVAA Trigger: GGCAGCCACCGTGATGTTGGCAGCAGGCTGGACCCACTCGAGCCCGGCCGGCTTCCGGCTGCTGCTTCTCCA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040962.6 |
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| CDS CCA 72 bp | TGCGCGCCGGGCAAGAAGCGCTGGTTTTGTGCTCGCTaGAGAAGCAGCAGCCGGAAGCCGGCCGGGCTCGAG | + |
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Preference number: 6 (lower is better) Translates to: CAPGKKRWFCAR*RSSSRKPAGLE Trigger: CTCGAGCCCGGCCGGCTTCCGGCTGCTGCTTCTCCAGCGAGCACAAAACCAGCGCTTCTTGCCCGGCGCGCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040962.6 |
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| CDS CCA 72 bp | GGAGCAGCACCCCCGCCTCCTCGAAGGCTTCGCGGATaGCACAGATGCGCAGCGCTACGTCATCGGGCAGCG | + |
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Preference number: 6 (lower is better) Translates to: GAAPPPPRRLRG*HRCAALRHRAA Trigger: CGCTGCCCGATGACGTAGCGCTGCGCATCTGTGCCATCCGCGAAGCCTTCGAGGAGGCGGGGGTGCTGCTCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040962.6 |
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| CDS GCA 72 bp | GAAGACGTGCGCGCCGGGCAAGAAGCGCTGGTTTTGTaGTCGCTGGAGAAGCAGCAGCCGGAAGCCGGCCGG | + |
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Preference number: 6 (lower is better) Translates to: EDVRAGQEALVL*SLEKQQPEAGR Trigger: CCGGCCGGCTTCCGGCTGCTGCTTCTCCAGCGAGCACAAAACCAGCGCTTCTTGCCCGGCGCGCACGTCTTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040962.6 |
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| CDS CCA 72 bp | CCGCCCGGGAAGACGTGCGCGCCGGGCAAGAAGCGCTaGTTTTGTGCTCGCTGGAGAAGCAGCAGCCGGAAG | + |
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Preference number: 6 (lower is better) Translates to: PPGKTCAPGKKR*FCARWRSSSRK Trigger: CTTCCGGCTGCTGCTTCTCCAGCGAGCACAAAACCAGCGCTTCTTGCCCGGCGCGCACGTCTTCCCGGGCGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040962.6 |
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| CDS CAA 72 bp | CGGGAAGACGTGCGCGCCGGGCAAGAAGCGCTGGTTTaGTGCTCGCTGGAGAAGCAGCAGCCGGAAGCCGGC | + |
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Preference number: 6 (lower is better) Translates to: REDVRAGQEALV*CSLEKQQPEAG Trigger: GCCGGCTTCCGGCTGCTGCTTCTCCAGCGAGCACAAAACCAGCGCTTCTTGCCCGGCGCGCACGTCTTCCCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040962.6 |
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| CDS CAA 90 bp | CTCCTGGGAGAAGATGGATGGTGCCATCAGAAGTTAAAAGTATTATaGGCAGCCATTTCTCAGGTACTTCTGATGGGCGATCCGAACAAA | + |
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Preference number: 6 (lower is better) Translates to: LLGEDGWCHQKLKVL*AAISQVLLMGDPNK Trigger: TTTGTTCGGATCGCCCATCAGAAGTACCTGAGAAATGGCTGCCAATAATACTTTTAACTTCTGATGGCACCATCCATCTTCTCCCAGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040962.6 |
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| CDS CCA 72 bp | CTTTCACATACAGCTCATCTCCTGGGAGAAGATGGATaGTGCCATCAGAAGTTAAAAGTATTATTGGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: LSHTAHLLGEDG*CHQKLKVLLAA Trigger: GGCTGCCAATAATACTTTTAACTTCTGATGGCACCATCCATCTTCTCCCAGGAGATGAGCTGTATGTGAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040962.6 |
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| CDS GCA 72 bp | TCACATACAGCTCATCTCCTGGGAGAAGATGGATGGTaGCATCAGAAGTTAAAAGTATTATTGGCAGCCATT | + |
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Preference number: 6 (lower is better) Translates to: SHTAHLLGEDGW*HQKLKVLLAAI Trigger: AATGGCTGCCAATAATACTTTTAACTTCTGATGGCACCATCCATCTTCTCCCAGGAGATGAGCTGTATGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040962.6 |
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| CDS CCA 72 bp | GAGTCTTTCACATACAGCTCATCTCCTGGGAGAAGATaGATGGTGCCATCAGAAGTTAAAAGTATTATTGGC | + |
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Preference number: 6 (lower is better) Translates to: ESFTYSSSPGRR*MVPSEVKSIIG Trigger: GCCAATAATACTTTTAACTTCTGATGGCACCATCCATCTTCTCCCAGGAGATGAGCTGTATGTGAAAGACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040962.6 |
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| CDS CAA 72 bp | GAAGATGGATGGTGCCATCAGAAGTTAAAAGTATTATaGGCAGCCATTTCTCAGGTACTTCTGATGGGCGAT | + |
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Preference number: 6 (lower is better) Translates to: EDGWCHQKLKVL*AAISQVLLMGD Trigger: ATCGCCCATCAGAAGTACCTGAGAAATGGCTGCCAATAATACTTTTAACTTCTGATGGCACCATCCATCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040962.6 |
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