Pregenerated sensors for NUDT18 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045211Ensembl transcript IDs: ENSMUST00000089049.4, ENSMUST00000228554.2, ENSMUST00000228768.2
Found 176 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTGTCCCCACCGTGCCCACCAACACCCACACCGACTGGACTGTTGTaGAGGTGGTCACCAGCCGTTGGCAGACCACACTGCAGGGGAGCT | + |
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Preference number: 1 (lower is better) Translates to: VSPPCPPTPTPTGLL*RWSPAVGRPHCRGA Trigger: AGCTCCCCTGCAGTGTGGTCTGCCAACGGCTGGTGACCACCTTCACAACAGTCCAGTCGGTGTGGGTGTTGGTGGGCACGGTGGGGACAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228554.2 |
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| 3UTR GCA 90 bp | CCACGGTCACCAGCACATTCAGGCAGACACCATCCACATGGTCTCTaGCTAGGTGTTGCAACCCAAGCAACCCCTTGGTCTCCACTGCCA | + |
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Preference number: 1 (lower is better) Translates to: PRSPAHSGRHHPHGL*LGVATQATPWSPLP Trigger: TGGCAGTGGAGACCAAGGGGTTGCTTGGGTTGCAACACCTAGGCAGAGACCATGTGGATGGTGTCTGCCTGAATGTGCTGGTGACCGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228554.2 |
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| 3UTR CCA 90 bp | CGAAAAGCCACGGTCACCAGCACATTCAGGCAGACACCATCCACATaGTCTCTGCCTAGGTGTTGCAACCCAAGCAACCCCTTGGTCTCC | + |
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Preference number: 1 (lower is better) Translates to: RKATVTSTFRQTPST*SLPRCCNPSNPLVS Trigger: GGAGACCAAGGGGTTGCTTGGGTTGCAACACCTAGGCAGAGACCATGTGGATGGTGTCTGCCTGAATGTGCTGGTGACCGTGGCTTTTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228554.2 |
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| 3UTR GCA 90 bp | GGCTCCCGACACCCTCCTTCTCTTGCTTATGTGCATGCATGTGCCTaGTCATGCGCTTGGACAGACACACACACACACACACACACACAC | + |
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Preference number: 1 (lower is better) Translates to: GSRHPPSLAYVHACA*SCAWTDTHTHTHTH Trigger: GTGTGTGTGTGTGTGTGTGTGTGTGTCTGTCCAAGCGCATGAGCAGGCACATGCATGCACATAAGCAAGAGAAGGAGGGTGTCGGGAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
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| 3UTR CCA 90 bp | CCAGCTGGGGAGATGGCTCAGGGGGTGAAAGTGCCAACAGAGCCATaGGTTTCTCTGTATTCCCATCACCCAGGTAAGAAGCCAAGGTGT | + |
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Preference number: 1 (lower is better) Translates to: PAGEMAQGVKVPTEP*VSLYSHHPGKKPRC Trigger: ACACCTTGGCTTCTTACCTGGGTGATGGGAATACAGAGAAACCCATGGCTCTGTTGGCACTTTCACCCCCTGAGCCATCTCCCCAGCTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
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| 3UTR TCA 90 bp | TCCCATCACCCAGGTAAGAAGCCAAGGTGTGGCTGCGTACACATCTaGCGTCCTAGAGCCATGGGTAAAGGAGACAGGAGGATCACTGGA | + |
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Preference number: 1 (lower is better) Translates to: SHHPGKKPRCGCVHI*RPRAMGKGDRRITG Trigger: TCCAGTGATCCTCCTGTCTCCTTTACCCATGGCTCTAGGACGTCAGATGTGTACGCAGCCACACCTTGGCTTCTTACCTGGGTGATGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
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| 3UTR CCA 90 bp | CATCCACATGGTCTCTGCCTAGGTGTTGCAACCCAAGCAACCCCTTaGTCTCCACTGCCAAACTGTGCAGAGTCAGACACTCCTGTAGGA | + |
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Preference number: 1 (lower is better) Translates to: HPHGLCLGVATQATP*SPLPNCAESDTPVG Trigger: TCCTACAGGAGTGTCTGACTCTGCACAGTTTGGCAGTGGAGACCAAGGGGTTGCTTGGGTTGCAACACCTAGGCAGAGACCATGTGGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228554.2 |
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| 3UTR TCA 90 bp | AACTCAGGTCCTCAGCATGAGCCAGCCGCATATGCTCTTAACTGCTaGGCGGAGCCACCTCGCCAGCTCCGAAGCTTTCATCAGATAATA | + |
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Preference number: 1 (lower is better) Translates to: NSGPQHEPAAYALNC*AEPPRQLRSFHQII Trigger: TATTATCTGATGAAAGCTTCGGAGCTGGCGAGGTGGCTCCGCTCAGCAGTTAAGAGCATATGCGGCTGGCTCATGCTGAGGACCTGAGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
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| 3UTR GCA 90 bp | CGACACCCTCCTTCTCTTGCTTATGTGCATGCATGTGCCTGCTCATaGGCTTGGACAGACACACACACACACACACACACACACACACAC | + |
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Preference number: 1 (lower is better) Translates to: RHPPSLAYVHACACS*AWTDTHTHTHTHTH Trigger: GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTCCAAGCGCATGAGCAGGCACATGCATGCACATAAGCAAGAGAAGGAGGGTGTCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
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| 3UTR GCA 90 bp | AATAGAACAGGGCTCCCGACACCCTCCTTCTCTTGCTTATGTGCATaGATGTGCCTGCTCATGCGCTTGGACAGACACACACACACACAC | + |
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Preference number: 1 (lower is better) Translates to: NRTGLPTPSFSCLCA*MCLLMRLDRHTHTH Trigger: GTGTGTGTGTGTGTGTCTGTCCAAGCGCATGAGCAGGCACATGCATGCACATAAGCAAGAGAAGGAGGGTGTCGGGAGCCCTGTTCTATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
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| 3UTR TCA 90 bp | AGAGTTCACAGTCTGCCTGGGCGACATGAACTGAGGACAGGGACATaGACAAAAACCAAAAAGCCAGGTCCGAGAGCACACGGAACAGGT | + |
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Preference number: 1 (lower is better) Translates to: RVHSLPGRHELRTGT*TKTKKPGPRAHGTG Trigger: ACCTGTTCCGTGTGCTCTCGGACCTGGCTTTTTGGTTTTTGTTCATGTCCCTGTCCTCAGTTCATGTCGCCCAGGCAGACTGTGAACTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
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| 3UTR GCA 90 bp | AAGTGGATTCAAGACACCCTCCCTTTGGGCTCAATGTGTGGTCCCTaGCCCCTCAAAATGTGCAATGAGATCCCTGACTGCCAGCCTTTT | + |
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Preference number: 1 (lower is better) Translates to: KWIQDTLPLGSMCGP*PLKMCNEIPDCQPF Trigger: AAAAGGCTGGCAGTCAGGGATCTCATTGCACATTTTGAGGGGGCAGGGACCACACATTGAGCCCAAAGGGAGGGTGTCTTGAATCCACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 ENSMUST00000228768.2 |
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| 3UTR TCA 90 bp | CATCACCAGCTACATTATAAGAGTTCACAGTCTGCCTGGGCGACATaGACTGAGGACAGGGACATGAACAAAAACCAAAAAGCCAGGTCC | + |
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Preference number: 1 (lower is better) Translates to: HHQLHYKSSQSAWAT*TEDRDMNKNQKARS Trigger: GGACCTGGCTTTTTGGTTTTTGTTCATGTCCCTGTCCTCAGTTCATGTCGCCCAGGCAGACTGTGAACTCTTATAATGTAGCTGGTGATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
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| 3UTR GCA 90 bp | TGTCCCATCCCTCTCTACATTCCTATGGGGTTGGAAGGATTGACATaGAGCCTTTTCCAAAGTGGACAAAGATGGTGCCATTTAGGGTTC | + |
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Preference number: 1 (lower is better) Translates to: CPIPLYIPMGLEGLT*SLFQSGQRWCHLGF Trigger: GAACCCTAAATGGCACCATCTTTGTCCACTTTGGAAAAGGCTGCATGTCAATCCTTCCAACCCCATAGGAATGTAGAGAGGGATGGGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 ENSMUST00000228768.2 |
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| 3UTR TCA 90 bp | CCAGGACTCAAGAATTGGAGGCAGGAAGATCACAACAAACTTGATTaGGGTCAGCCTGGTCTATGTGGGCAGAGTCTATCTCAAGAAAAC | + |
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Preference number: 1 (lower is better) Translates to: PGLKNWRQEDHNKLD*GQPGLCGQSLSQEN Trigger: GTTTTCTTGAGATAGACTCTGCCCACATAGACCAGGCTGACCTCAATCAAGTTTGTTGTGATCTTCCTGCCTCCAATTCTTGAGTCCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
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| 3UTR TCA 90 bp | ATTCCCAGGACTCAAGAATTGGAGGCAGGAAGATCACAACAAACTTaGTTGAGGTCAGCCTGGTCTATGTGGGCAGAGTCTATCTCAAGA | + |
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Preference number: 1 (lower is better) Translates to: IPRTQELEAGRSQQT*LRSAWSMWAESISR Trigger: TCTTGAGATAGACTCTGCCCACATAGACCAGGCTGACCTCAATCAAGTTTGTTGTGATCTTCCTGCCTCCAATTCTTGAGTCCTGGGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
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| 3UTR TCA 90 bp | AAAGGATCAAGGAGTTTTTCTGGCTCCTCAAGCTACTGTCCTCTGTaGAAAGCAATGCTAGGAAGTGCGTCTCCTTGCTCAGAATCAGAA | + |
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Preference number: 1 (lower is better) Translates to: KGSRSFSGSSSYCPL*KAMLGSASPCSESE Trigger: TTCTGATTCTGAGCAAGGAGACGCACTTCCTAGCATTGCTTTTCACAGAGGACAGTAGCTTGAGGAGCCAGAAAAACTCCTTGATCCTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
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| 3UTR CCA 90 bp | CTGCTGGAATCTCTCTATCTGCTCAGGGGGATCACAGAAGATTCCTaGAGTCTGTACAGAAGCAGTTTTTGTAAATCTTCCTCTAATACC | + |
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Preference number: 1 (lower is better) Translates to: LLESLYLLRGITEDS*SLYRSSFCKSSSNT Trigger: GGTATTAGAGGAAGATTTACAAAAACTGCTTCTGTACAGACTCCAGGAATCTTCTGTGATCCCCCTGAGCAGATAGAGAGATTCCAGCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000228554.2 |
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| 3UTR-3UTR TCA 90 bp | CACACACACACGCCAGCTCCCAGCTGGTTTCAGCAGCTTAGTCACCCTAGTGGGGAGGAAAGACCTGGGTaGCTGTGGGTGGGACAGTGC | + |
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Preference number: 2 (lower is better) Translates to: HTHTPAPSWFQQLSHPSGEERPG*LWVGQC Trigger: GCACTGTCCCACCCACAGTCACCCAGGTCTTTCCTC...CCCACTAGGGTGACTAAGCTGCTGAAACCAGCTGGGAGCTGGCGTGTGTGTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
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| 3UTR CAA 90 bp | CAACACCCACACCGACTGGACTGTTGTGAAGGTGGTCACCAGCCGTaGGCAGACCACACTGCAGGGGAGCTCTTGAGGCAGAATGAGAGG | + |
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Preference number: 2 (lower is better) Translates to: QHPHRLDCCEGGHQP*ADHTAGELLRQNER Trigger: CCTCTCATTCTGCCTCAAGAGCTCCCCTGCAGTGTGGTCTGCCAACGGCTGGTGACCACCTTCACAACAGTCCAGTCGGTGTGGGTGTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228554.2 |
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| 3UTR-3UTR CCA 90 bp | TACTGGTGCCCAGCTGGGGAGATGGCTCAGGGGGTGAAAGTGCCAACAGAGCCAACGCCAGCTCCCAGCTaGTTTCAGCAGCTTAGTCAC | + |
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Preference number: 2 (lower is better) Translates to: YWCPAGEMAQGVKVPTEPTPAPS*FQQLSH Trigger: GTGACTAAGCTGCTGAAACCAGCTGGGAGCTGGCGT...TGGCTCTGTTGGCACTTTCACCCCCTGAGCCATCTCCCCAGCTGGGCACCAGTA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
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| 3UTR CAA 90 bp | GAAGGTGGTCACCAGCCGTTGGCAGACCACACTGCAGGGGAGCTCTaGAGGCAGAATGAGAGGGTGCATGGCTTGTTGGCAGAATTTGGC | + |
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Preference number: 2 (lower is better) Translates to: EGGHQPLADHTAGEL*RQNERVHGLLAEFG Trigger: GCCAAATTCTGCCAACAAGCCATGCACCCTCTCATTCTGCCTCAAGAGCTCCCCTGCAGTGTGGTCTGCCAACGGCTGGTGACCACCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228554.2 |
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| 3UTR-3UTR GCA 90 bp | TACTGGTGCCCAGCTGGGGAGATGGCTCAGGGGGTGAAAGTGCCAACAGAGCCAGCGAGCATCGATGTCTaGCTCAGGATCCTTACATCC | + |
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Preference number: 2 (lower is better) Translates to: YWCPAGEMAQGVKVPTEPASIDV*LRILTS Trigger: GGATGTAAGGATCCTGAGGCAGACATCGATGCTCGC...TGGCTCTGTTGGCACTTTCACCCCCTGAGCCATCTCCCCAGCTGGGCACCAGTA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
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| 3UTR-3UTR CCA 90 bp | GCCACTTGGTGCAAGGACTGGAAACCAAACTCAGGTCCTCAGCATGAGCCAGCCCTGGGTGACTGTGGGTaGGACAGTGCCCCATATCCT | + |
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Preference number: 2 (lower is better) Translates to: ATWCKDWKPNSGPQHEPALGDCG*DSAPYP Trigger: AGGATATGGGGCACTGTCCCACCCACAGTCACCCAG...GGCTGGCTCATGCTGAGGACCTGAGTTTGGTTTCCAGTCCTTGCACCAAGTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
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| 3UTR CAA 90 bp | CTGTGCAGAGTCAGACACTCCTGTAGGAGCCTCAAGATGGCCACCTaGATGCCGCCCCTTTGTTCCATAGGGGTAAAGCCACAGGCAGTG | + |
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Preference number: 2 (lower is better) Translates to: LCRVRHSCRSLKMAT*MPPLCSIGVKPQAV Trigger: CACTGCCTGTGGCTTTACCCCTATGGAACAAAGGGGCGGCATCAAGGTGGCCATCTTGAGGCTCCTACAGGAGTGTCTGACTCTGCACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228554.2 |
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| 3UTR-3UTR GCA 90 bp | CCAGGAAGCTCAAAGAGAAAAAGACTGGCAGAGGCCAACGTGTCATCCTCAGCTCTCTGCCCTGAGGGATaGGTCCCCCATGTCCCATCC | + |
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Preference number: 2 (lower is better) Translates to: PGSSKRKRLAEANVSSSALCPEG*VPHVPS Trigger: GGATGGGACATGGGGGACGCATCCCTCAGGGCAGAG...AGCTGAGGATGACACGTTGGCCTCTGCCAGTCTTTTTCTCTTTGAGCTTCCTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
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| 3UTR-3UTR GCA 90 bp | TACTGGTGCCCAGCTGGGGAGATGGCTCAGGGGGTGAAAGTGCCAACAGAGCCATCTTGCTTATGTGCATaGATGTGCCTGCTCATGCGC | + |
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Preference number: 2 (lower is better) Translates to: YWCPAGEMAQGVKVPTEPSCLCA*MCLLMR Trigger: GCGCATGAGCAGGCACATGCATGCACATAAGCAAGA...TGGCTCTGTTGGCACTTTCACCCCCTGAGCCATCTCCCCAGCTGGGCACCAGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
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| 3UTR-3UTR GCA 90 bp | AAAAAGAGCCTGGGTGGGTCGAGGCTTCAGCGAGCATCGATGTCTGCCTCAGGACCCCTTGGTCTCCACTaGCAAACTGTGCAGAGTCAG | + |
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Preference number: 2 (lower is better) Translates to: KKSLGGSRLQRASMSASGPLGLH*QTVQSQ Trigger: CTGACTCTGCACAGTTTGGCAGTGGAGACCAAGGGG...TCCTGAGGCAGACATCGATGCTCGCTGAAGCCTCGACCCACCCAGGCTCTTTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228554.2 |
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| 3UTR-3UTR CCA 90 bp | TACTGGTGCCCAGCTGGGGAGATGGCTCAGGGGGTGAAAGTGCCAACAGAGCCAGTTACCAAAGAGGCCTaGGGCACTAGGAAAAGGATC | + |
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Preference number: 2 (lower is better) Translates to: YWCPAGEMAQGVKVPTEPVTKEA*GTRKRI Trigger: GATCCTTTTCCTAGTGCCCCAGGCCTCTTTGGTAAC...TGGCTCTGTTGGCACTTTCACCCCCTGAGCCATCTCCCCAGCTGGGCACCAGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
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| 3UTR-3UTR CCA 90 bp | TCTGCCCTGAGGGATGCGTCCCCCATGTCCCATCCCTCTCTACATTCCTATGGGCTCGTCTTGGATTCCTaGGTTCCGAAAAGCCACGGT | + |
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Preference number: 2 (lower is better) Translates to: SALRDASPMSHPSLHSYGLVLDS*VPKSHG Trigger: ACCGTGGCTTTTCGGAACCCAGGAATCCAAGACGAG...CCCATAGGAATGTAGAGAGGGATGGGACATGGGGGACGCATCCCTCAGGGCAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228554.2 |
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| 3UTR CAA 90 bp | CCATCCACATGGTCTCTGCCTAGGTGTTGCAACCCAAGCAACCCCTaGGTCTCCACTGCCAAACTGTGCAGAGTCAGACACTCCTGTAGG | + |
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Preference number: 2 (lower is better) Translates to: PSTWSLPRCCNPSNP*VSTAKLCRVRHSCR Trigger: CCTACAGGAGTGTCTGACTCTGCACAGTTTGGCAGTGGAGACCAAGGGGTTGCTTGGGTTGCAACACCTAGGCAGAGACCATGTGGATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228554.2 |
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| 3UTR-3UTR TCA 90 bp | TGCCCTGAGGGATGCGTCCCCCATGTCCCATCCCTCTCTACATTCCTATGGGGTGTGTGCCCTCAGAACTaGGCCCTTGAAAAGTGGATT | + |
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Preference number: 2 (lower is better) Translates to: CPEGCVPHVPSLSTFLWGVCPQN*ALEKWI Trigger: AATCCACTTTTCAAGGGCTCAGTTCTGAGGGCACAC...ACCCCATAGGAATGTAGAGAGGGATGGGACATGGGGGACGCATCCCTCAGGGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 ENSMUST00000228768.2 |
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| 3UTR-3UTR TCA 90 bp | CCCAGCTGGTTTCAGCAGCTTAGTCACCCTAGTGGGTGGACAGAACTGAGAACTGGCTGCGTACACATCTaGCGTCCTAGAGCCATGGGT | + |
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Preference number: 2 (lower is better) Translates to: PSWFQQLSHPSGWTELRTGCVHI*RPRAMG Trigger: ACCCATGGCTCTAGGACGTCAGATGTGTACGCAGCC...AGTTCTCAGTTCTGTCCACCCACTAGGGTGACTAAGCTGCTGAAACCAGCTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
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| 3UTR-3UTR GCA 90 bp | TACTGGTGCCCAGCTGGGGAGATGGCTCAGGGGGTGAAAGTGCCAACAGAGCCATCAATGTGTGGTCCCTaGCCCCTCAAAATGTGCAAT | + |
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Preference number: 2 (lower is better) Translates to: YWCPAGEMAQGVKVPTEPSMCGP*PLKMCN Trigger: ATTGCACATTTTGAGGGGGCAGGGACCACACATTGA...TGGCTCTGTTGGCACTTTCACCCCCTGAGCCATCTCCCCAGCTGGGCACCAGTA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
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| 3UTR-3UTR GCA 90 bp | TACTGGTGCCCAGCTGGGGAGATGGCTCAGGGGGTGAAAGTGCCAACAGAGCCAGGGATAAAAGGTGTGTaGCATCATACCTCGCTTTGG | + |
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Preference number: 2 (lower is better) Translates to: YWCPAGEMAQGVKVPTEPGIKGV*HHTSLW Trigger: CCAAAGCGAGGTATGATGGCACACACCTTTTATCCC...TGGCTCTGTTGGCACTTTCACCCCCTGAGCCATCTCCCCAGCTGGGCACCAGTA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
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| 3UTR-3UTR CCA 90 bp | AAAAAGAGCCTGGGTGGGTCGAGGCTTCAGCGAGCATCGATGTCTGCCTCAGGAAAGACACCCTCCCTTTaGGCTCAATGTGTGGTCCCT | + |
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Preference number: 2 (lower is better) Translates to: KKSLGGSRLQRASMSASGKTPSL*AQCVVP Trigger: AGGGACCACACATTGAGCCCAAAGGGAGGGTGTCTT...TCCTGAGGCAGACATCGATGCTCGCTGAAGCCTCGACCCACCCAGGCTCTTTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
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| 3UTR-3UTR CCA 90 bp | CTGAGGGATGCGTCCCCCATGTCCCATCCCTCTCTACATTCCTATGGGGTTGGAAAGACACCCTCCCTTTaGGCTCAATGTGTGGTCCCT | + |
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Preference number: 2 (lower is better) Translates to: LRDASPMSHPSLHSYGVGKTPSL*AQCVVP Trigger: AGGGACCACACATTGAGCCCAAAGGGAGGGTGTCTT...TCCAACCCCATAGGAATGTAGAGAGGGATGGGACATGGGGGACGCATCCCTCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 ENSMUST00000228768.2 |
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| 3UTR-3UTR CCA 90 bp | CCCAGGAAGCTCAAAGAGAAAAAGACTGGCAGAGGCCAACGTGTCATCCTCAGCCTGGGTGACTGTGGGTaGGACAGTGCCCCATATCCT | + |
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Preference number: 2 (lower is better) Translates to: PRKLKEKKTGRGQRVILSLGDCG*DSAPYP Trigger: AGGATATGGGGCACTGTCCCACCCACAGTCACCCAG...GCTGAGGATGACACGTTGGCCTCTGCCAGTCTTTTTCTCTTTGAGCTTCCTGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
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| 3UTR-3UTR CCA 90 bp | AAAAAGAGCCTGGGTGGGTCGAGGCTTCAGCGAGCATCGATGTCTGCCTCAGGATTTGGGCTCAATGTGTaGTCCCTGCCCCCTCAAAAT | + |
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Preference number: 2 (lower is better) Translates to: KKSLGGSRLQRASMSASGFGLNV*SLPPQN Trigger: ATTTTGAGGGGGCAGGGACCACACATTGAGCCCAAA...TCCTGAGGCAGACATCGATGCTCGCTGAAGCCTCGACCCACCCAGGCTCTTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
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| 3UTR-3UTR CCA 90 bp | AAGCCTTCAACTGCCCAAAGCGCCAGCTCCAGGGGATCTGATGCCTCTGAGGGCCAAAGAGAAAAAGACTaGCAGAGGCCAACGTGTCAT | + |
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Preference number: 2 (lower is better) Translates to: KPSTAQSASSRGSDASEGQREKD*QRPTCH Trigger: ATGACACGTTGGCCTCTGCCAGTCTTTTTCTCTTTG...GCCCTCAGAGGCATCAGATCCCCTGGAGCTGGCGCTTTGGGCAGTTGAAGGCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
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| 3UTR-3UTR CCA 90 bp | CTAGGCTTCTTTCTGAGATACTGGTGCCCAGCTGGGGAGATGGCTCAGGGGGTGAATCCTGTGCTGGCCTaGGAGTGTAACCCATTGATA | + |
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Preference number: 2 (lower is better) Translates to: LGFFLRYWCPAGEMAQGVNPVLA*ECNPLI Trigger: TATCAATGGGTTACACTCCCAGGCCAGCACAGGATT...CACCCCCTGAGCCATCTCCCCAGCTGGGCACCAGTATCTCAGAAAGAAGCCTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
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| 3UTR CAA 90 bp | GAGAAAAAGACTGGCAGAGGCCAACGTGTCATCCTCAGCTCTTTCTaGTTCCCTAGGCAGTTTCACCAGACCGAACCGTTCAACACCTGG | + |
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Preference number: 2 (lower is better) Translates to: EKKTGRGQRVILSSF*FPRQFHQTEPFNTW Trigger: CCAGGTGTTGAACGGTTCGGTCTGGTGAAACTGCCTAGGGAACAAGAAAGAGCTGAGGATGACACGTTGGCCTCTGCCAGTCTTTTTCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
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| 3UTR CAA 90 bp | CCCTCCTTCTCTTGCTTATGTGCATGCATGTGCCTGCTCATGCGCTaGGACAGACACACACACACACACACACACACACACACACACACA | + |
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Preference number: 2 (lower is better) Translates to: PSFSCLCACMCLLMR*DRHTHTHTHTHTHT Trigger: TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTCCAAGCGCATGAGCAGGCACATGCATGCACATAAGCAAGAGAAGGAGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
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| 3UTR-3UTR GCA 90 bp | AGCAATACCTTTTTACTCAGCAATGAGGACTCTGCCCTGAGGGATGCGTCCCCCTGCCCCCTCAAAATGTaGAATGAGATCCCTGACTGC | + |
|
Preference number: 2 (lower is better) Translates to: SNTFLLSNEDSALRDASPCPLKM*NEIPDC Trigger: GCAGTCAGGGATCTCATTGCACATTTTGAGGGGGCA...GGGGGACGCATCCCTCAGGGCAGAGTCCTCATTGCTGAGTAAAAAGGTATTGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 3 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 ENSMUST00000228768.2 |
||
| 3UTR-3UTR GCA 90 bp | TGGGCTCAATGTGTGGTCCCTGCCCCCTCAAAATGTGCAATGAGATCCCTGACTGGCAGAATGAGAGGGTaGATGGCTTGTTGGCAGAAT | + |
|
Preference number: 2 (lower is better) Translates to: WAQCVVPAPSKCAMRSLTGRMRG*MACWQN Trigger: ATTCTGCCAACAAGCCATGCACCCTCTCATTCTGCC...AGTCAGGGATCTCATTGCACATTTTGAGGGGGCAGGGACCACACATTGAGCCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228554.2 |
||
| 3UTR-3UTR CCA 90 bp | ATGCGTCCCCCATGTCCCATCCCTCTCTACATTCCTATGGGGTTGGAAGGATTGTTTGGGCTCAATGTGTaGTCCCTGCCCCCTCAAAAT | + |
|
Preference number: 2 (lower is better) Translates to: MRPPCPIPLYIPMGLEGLFGLNV*SLPPQN Trigger: ATTTTGAGGGGGCAGGGACCACACATTGAGCCCAAA...CAATCCTTCCAACCCCATAGGAATGTAGAGAGGGATGGGACATGGGGGACGCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 ENSMUST00000228768.2 |
||
| 3UTR CAA 90 bp | CAAAGCGCCAGCTCCAGGGGATCTGATGCCTCTGAGGGCCTGCACTaGAGTGTGCACACACACACACATAAACAGAAATCTAAAAAGACC | + |
|
Preference number: 2 (lower is better) Translates to: QSASSRGSDASEGLH*SVHTHTHKQKSKKT Trigger: GGTCTTTTTAGATTTCTGTTTATGTGTGTGTGTGTGCACACTCAAGTGCAGGCCCTCAGAGGCATCAGATCCCCTGGAGCTGGCGCTTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
||
| 3UTR-3UTR TCA 90 bp | GGTCAGCCTGGTCTATGTGGGCAGAGTCTATCTCAAGAAAACAGAATCCTGTGCGTGTGCCCTCAGAACTaGGCCCTTGAAAAGTGGATT | + |
|
Preference number: 2 (lower is better) Translates to: GQPGLCGQSLSQENRILCVCPQN*ALEKWI Trigger: AATCCACTTTTCAAGGGCTCAGTTCTGAGGGCACAC...GCACAGGATTCTGTTTTCTTGAGATAGACTCTGCCCACATAGACCAGGCTGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
||
| 3UTR-3UTR GCA 90 bp | GGCAGCTTAGTGAGTAACACACTTACTGCAGAGGACCTAAGTTTGCTTCCCAGCTTATGTGCATGCATGTaGCTGCTCATGCGCTTGGAC | + |
|
Preference number: 2 (lower is better) Translates to: GSLVSNTLTAEDLSLLPSLCACM*LLMRLD Trigger: GTCCAAGCGCATGAGCAGGCACATGCATGCACATAA...GCTGGGAAGCAAACTTAGGTCCTCTGCAGTAAGTGTGTTACTCACTAAGCTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
||
| 3UTR-3UTR CCA 90 bp | TCAGAGGGAGGGGGCAGCTCAGCTTTTGGTCCCTGCTGGAATCTCTCTATCTGCCAAAGTGGACAAAGATaGTGCCATTTAGGGTTCAAA | + |
|
Preference number: 2 (lower is better) Translates to: SEGGGSSAFGPCWNLSICQSGQR*CHLGFK Trigger: TTTGAACCCTAAATGGCACCATCTTTGTCCACTTTG...GCAGATAGAGAGATTCCAGCAGGGACCAAAAGCTGAGCTGCCCCCTCCCTCTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228554.2 |
||
| 3UTR-3UTR CCA 90 bp | CACACACACACGCCAGCTCCCAGCTGGTTTCAGCAGCTTAGTCACCCTAGTGGGCTTTGGTTTATCATTTaGAAACTATGTCCTCAGGGA | + |
|
Preference number: 2 (lower is better) Translates to: HTHTPAPSWFQQLSHPSGLWFII*KLCPQG Trigger: TCCCTGAGGACATAGTTTCCAAATGATAAACCAAAG...CCCACTAGGGTGACTAAGCTGCTGAAACCAGCTGGGAGCTGGCGTGTGTGTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
||
| 3UTR-3UTR GCA 90 bp | CAGAGTCTATCTCAAGAAAACAGAATCCTGTGCTGGCCTGGGAGTGTAACCCATTGCCCCCTCAAAATGTaGAATGAGATCCCTGACTGC | + |
|
Preference number: 2 (lower is better) Translates to: QSLSQENRILCWPGSVTHCPLKM*NEIPDC Trigger: GCAGTCAGGGATCTCATTGCACATTTTGAGGGGGCA...ATGGGTTACACTCCCAGGCCAGCACAGGATTCTGTTTTCTTGAGATAGACTCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
||
| 3UTR-3UTR GCA 90 bp | TTTAAGAATAATCTAGGCTTCTTTCTGAGATACTGGTGCCCAGCTGGGGAGATGGGCAGTGAATGTCACTaGCCTTCTCTGTGTGTGGGG | + |
|
Preference number: 2 (lower is better) Translates to: FKNNLGFFLRYWCPAGEMGSECH*PSLCVG Trigger: CCCCACACACAGAGAAGGGCAGTGACATTCACTGCC...CATCTCCCCAGCTGGGCACCAGTATCTCAGAAAGAAGCCTAGATTATTCTTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
||
| 3UTR-3UTR CCA 90 bp | ATACCTCGCTTTGGTTTATCATTTGGAAACTATGTCCTCAGGGAGTCTAAGGAGGCCCTTCTCTGTGTGTaGGGGAACTGGAGGAGTCCT | + |
|
Preference number: 2 (lower is better) Translates to: IPRFGLSFGNYVLRESKEALLCV*GNWRSP Trigger: AGGACTCCTCCAGTTCCCCCACACACAGAGAAGGGC...CTCCTTAGACTCCCTGAGGACATAGTTTCCAAATGATAAACCAAAGCGAGGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
||
| 3UTR-3UTR CCA 90 bp | AACACACTTACTGCAGAGGACCTAAGTTTGCTTCCCAGCACCAATGTAAGGAAGGACGTCCTAGAGCCATaGGTAAAGGAGACAGGAGGA | + |
|
Preference number: 2 (lower is better) Translates to: NTLTAEDLSLLPSTNVRKDVLEP*VKETGG Trigger: TCCTCCTGTCTCCTTTACCCATGGCTCTAGGACGTC...CTTCCTTACATTGGTGCTGGGAAGCAAACTTAGGTCCTCTGCAGTAAGTGTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
||
| 3UTR-3UTR TCA 90 bp | ATAGACCAGACCCTGTCTCACGGGAATAAAGTAGAAAGCAATAGAACAGGGCTCGTGTGCCCTCAGAACTaGGCCCTTGAAAAGTGGATT | + |
|
Preference number: 2 (lower is better) Translates to: IDQTLSHGNKVESNRTGLVCPQN*ALEKWI Trigger: AATCCACTTTTCAAGGGCTCAGTTCTGAGGGCACAC...GAGCCCTGTTCTATTGCTTTCTACTTTATTCCCGTGAGACAGGGTCTGGTCTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
||
| 3UTR-3UTR GCA 90 bp | CCCAGGAAGCTCAAAGAGAAAAAGACTGGCAGAGGCCAACGTGTCATCCTCAGCAGTGGACAAAGATGGTaGCATTTAGGGTTCAAAAAG | + |
|
Preference number: 2 (lower is better) Translates to: PRKLKEKKTGRGQRVILSSGQRW*HLGFKK Trigger: CTTTTTGAACCCTAAATGGCACCATCTTTGTCCACT...GCTGAGGATGACACGTTGGCCTCTGCCAGTCTTTTTCTCTTTGAGCTTCCTGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
||
| 3UTR-3UTR CCA 90 bp | GGTTGTGAGCCACTTGGTGCAAGGACTGGAAACCAAACTCAGGTCCTCAGCATGCAAAGTGGACAAAGATaGTGCCATTTAGGGTTCAAA | + |
|
Preference number: 2 (lower is better) Translates to: GCEPLGARTGNQTQVLSMQSGQR*CHLGFK Trigger: TTTGAACCCTAAATGGCACCATCTTTGTCCACTTTG...CATGCTGAGGACCTGAGTTTGGTTTCCAGTCCTTGCACCAAGTGGCTCACAACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
||
| 3UTR-3UTR GCA 90 bp | TCAGTGATAGACCAGACCCTGTCTCACGGGAATAAAGTAGAAAGCAATAGAACAGCGAGCATCGATGTCTaGCTCAGGATCCTTACATCC | + |
|
Preference number: 2 (lower is better) Translates to: SVIDQTLSHGNKVESNRTASIDV*LRILTS Trigger: GGATGTAAGGATCCTGAGGCAGACATCGATGCTCGC...TGTTCTATTGCTTTCTACTTTATTCCCGTGAGACAGGGTCTGGTCTATCACTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
||
| 3UTR CAA 90 bp | ATCTCAAGAAAACAGAATCCTGTGCTGGCCTGGGAGTGTAACCCATaGATAAAAGGGCTTGACTTCTGCAGAATCTGGATGAGTCAAGGT | + |
|
Preference number: 2 (lower is better) Translates to: ISRKQNPVLAWECNP*IKGLDFCRIWMSQG Trigger: ACCTTGACTCATCCAGATTCTGCAGAAGTCAAGCCCTTTTATCAATGGGTTACACTCCCAGGCCAGCACAGGATTCTGTTTTCTTGAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
||
| 3UTR-3UTR TCA 90 bp | TCAGTGATAGACCAGACCCTGTCTCACGGGAATAAAGTAGAAAGCAATAGAACATCTGCAGAATCTGGATaGGTCAAGGTCATCACCAGC | + |
|
Preference number: 2 (lower is better) Translates to: SVIDQTLSHGNKVESNRTSAESG*VKVITS Trigger: GCTGGTGATGACCTTGACTCATCCAGATTCTGCAGA...TGTTCTATTGCTTTCTACTTTATTCCCGTGAGACAGGGTCTGGTCTATCACTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
||
| 3UTR-3UTR TCA 90 bp | ATAGACCAGACCCTGTCTCACGGGAATAAAGTAGAAAGCAATAGAACAGGGCTCCACAACAAACTTGATTaGGGTCAGCCTGGTCTATGT | + |
|
Preference number: 2 (lower is better) Translates to: IDQTLSHGNKVESNRTGLHNKLD*GQPGLC Trigger: ACATAGACCAGGCTGACCTCAATCAAGTTTGTTGTG...GAGCCCTGTTCTATTGCTTTCTACTTTATTCCCGTGAGACAGGGTCTGGTCTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
||
| 3UTR-3UTR GCA 90 bp | TTTAGGGTTCAAAAAGTTCCTCACCAACTTAAAAGACAAGTACTGTGTGCCCTCTGCCCCCTCAAAATGTaGAATGAGATCCCTGACTGC | + |
|
Preference number: 2 (lower is better) Translates to: FRVQKVPHQLKRQVLCALCPLKM*NEIPDC Trigger: GCAGTCAGGGATCTCATTGCACATTTTGAGGGGGCA...GAGGGCACACAGTACTTGTCTTTTAAGTTGGTGAGGAACTTTTTGAACCCTAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 ENSMUST00000228768.2 |
||
| 3UTR-3UTR GCA 90 bp | AACACACTTACTGCAGAGGACCTAAGTTTGCTTCCCAGCACCAATGTAAGGAAGTTGGAAGGATTGACATaGAGCCTTTTCCAAAGTGGA | + |
|
Preference number: 2 (lower is better) Translates to: NTLTAEDLSLLPSTNVRKLEGLT*SLFQSG Trigger: TCCACTTTGGAAAAGGCTGCATGTCAATCCTTCCAA...CTTCCTTACATTGGTGCTGGGAAGCAAACTTAGGTCCTCTGCAGTAAGTGTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
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| 3UTR-3UTR CCA 90 bp | ATGGTGCCATTTAGGGTTCAAAAAGTTCCTCACCAACTTAAAAGACAAGTACTGAAGACACCCTCCCTTTaGGCTCAATGTGTGGTCCCT | + |
|
Preference number: 2 (lower is better) Translates to: MVPFRVQKVPHQLKRQVLKTPSL*AQCVVP Trigger: AGGGACCACACATTGAGCCCAAAGGGAGGGTGTCTT...CAGTACTTGTCTTTTAAGTTGGTGAGGAACTTTTTGAACCCTAAATGGCACCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 ENSMUST00000228768.2 |
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| 3UTR-3UTR CCA 90 bp | TTTAAGAATAATCTAGGCTTCTTTCTGAGATACTGGTGCCCAGCTGGGGAGATGATCACAGAAGATTCCTaGAGTCTGTACAGAAGCAGT | + |
|
Preference number: 2 (lower is better) Translates to: FKNNLGFFLRYWCPAGEMITEDS*SLYRSS Trigger: ACTGCTTCTGTACAGACTCCAGGAATCTTCTGTGAT...CATCTCCCCAGCTGGGCACCAGTATCTCAGAAAGAAGCCTAGATTATTCTTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228554.2 |
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| 3UTR-3UTR TCA 90 bp | CTGCACTTGAGTGTGCACACACACACACATAAACAGAAATCTAAAAAGACCTTTAGCTACTGTCCTCTGTaGAAAGCAATGCTAGGAAGT | + |
|
Preference number: 2 (lower is better) Translates to: LHLSVHTHTHKQKSKKTFSYCPL*KAMLGS Trigger: ACTTCCTAGCATTGCTTTTCACAGAGGACAGTAGCT...AAAGGTCTTTTTAGATTTCTGTTTATGTGTGTGTGTGTGCACACTCAAGTGCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
||
| 3UTR TCA 72 bp | CCGTGCCCACCAACACCCACACCGACTGGACTGTTGTaGAGGTGGTCACCAGCCGTTGGCAGACCACACTGC | + |
|
Preference number: 3 (lower is better) Translates to: PCPPTPTPTGLL*RWSPAVGRPHC Trigger: GCAGTGTGGTCTGCCAACGGCTGGTGACCACCTTCACAACAGTCCAGTCGGTGTGGGTGTTGGTGGGCACGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228554.2 |
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| 3UTR CCA 72 bp | GCCCGCCCTGACAGGACAGGAACACTAAAAAGAGCCTaGGTGGGTCGAGGCTTCAGCGAGCATCGATGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: ARPDRTGTLKRA*VGRGFSEHRCL Trigger: CAGACATCGATGCTCGCTGAAGCCTCGACCCACCCAGGCTCTTTTTAGTGTTCCTGTCCTGTCAGGGCGGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
||
| 3UTR TCA 72 bp | CCTCAGCATGAGCCAGCCGCATATGCTCTTAACTGCTaGGCGGAGCCACCTCGCCAGCTCCGAAGCTTTCAT | + |
|
Preference number: 3 (lower is better) Translates to: PQHEPAAYALNC*AEPPRQLRSFH Trigger: ATGAAAGCTTCGGAGCTGGCGAGGTGGCTCCGCTCAGCAGTTAAGAGCATATGCGGCTGGCTCATGCTGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
||
| 3UTR CCA 72 bp | TTTCTCTGCCTCAGAGGGAGGGGGCAGCTCAGCTTTTaGTCCCTGCTGGAATCTCTCTATCTGCTCAGGGGG | + |
|
Preference number: 3 (lower is better) Translates to: FLCLRGRGQLSF*SLLESLYLLRG Trigger: CCCCCTGAGCAGATAGAGAGATTCCAGCAGGGACCAAAAGCTGAGCTGCCCCCTCCCTCTGAGGCAGAGAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228554.2 |
||
| 3UTR CCA 72 bp | TGGATAGGGACCCTTTCGTCTCAGCCTCCTGAGTGCTaGAGTTACAGGTGTGTACTCCGGTGCCCAACTCCC | + |
|
Preference number: 3 (lower is better) Translates to: WIGTLSSQPPEC*SYRCVLRCPTP Trigger: GGGAGTTGGGCACCGGAGTACACACCTGTAACTCCAGCACTCAGGAGGCTGAGACGAAAGGGTCCCTATCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228554.2 |
||
| 3UTR GCA 72 bp | CCTGGGTGGGTCGAGGCTTCAGCGAGCATCGATGTCTaGCTCAGGATCCTTACATCCCTGCATAGCATCAGT | + |
|
Preference number: 3 (lower is better) Translates to: PGWVEASASIDV*LRILTSLHSIS Trigger: ACTGATGCTATGCAGGGATGTAAGGATCCTGAGGCAGACATCGATGCTCGCTGAAGCCTCGACCCACCCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
||
| 3UTR GCA 72 bp | GGGCTCCCGACACCCTCCTTCTCTTGCTTATGTGCATaGATGTGCCTGCTCATGCGCTTGGACAGACACACA | + |
|
Preference number: 3 (lower is better) Translates to: GLPTPSFSCLCA*MCLLMRLDRHT Trigger: TGTGTGTCTGTCCAAGCGCATGAGCAGGCACATGCATGCACATAAGCAAGAGAAGGAGGGTGTCGGGAGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
||
| 3UTR CCA 72 bp | ACGGTCACCAGCACATTCAGGCAGACACCATCCACATaGTCTCTGCCTAGGTGTTGCAACCCAAGCAACCCC | + |
|
Preference number: 3 (lower is better) Translates to: TVTSTFRQTPST*SLPRCCNPSNP Trigger: GGGGTTGCTTGGGTTGCAACACCTAGGCAGAGACCATGTGGATGGTGTCTGCCTGAATGTGCTGGTGACCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228554.2 |
||
| 3UTR-3UTR CAA 90 bp | CCCAGCTGGTTTCAGCAGCTTAGTCACCCTAGTGGGTGGACAGAACTGAGAACTGGGGCAGCTCAGCTTTaGGTCCCTGCTGGAATCTCT | + |
|
Preference number: 3 (lower is better) Translates to: PSWFQQLSHPSGWTELRTGAAQL*VPAGIS Trigger: AGAGATTCCAGCAGGGACCAAAAGCTGAGCTGCCCC...AGTTCTCAGTTCTGTCCACCCACTAGGGTGACTAAGCTGCTGAAACCAGCTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
||
| 3UTR TCA 72 bp | GATACTGGTGCCCAGCTGGGGAGATGGCTCAGGGGGTaGAAGTGCCAACAGAGCCATGGGTTTCTCTGTATT | + |
|
Preference number: 3 (lower is better) Translates to: DTGAQLGRWLRG*KCQQSHGFLCI Trigger: AATACAGAGAAACCCATGGCTCTGTTGGCACTTTCACCCCCTGAGCCATCTCCCCAGCTGGGCACCAGTATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
||
| 3UTR TCA 72 bp | TTTGAACTGGATAGGGACCCTTTCGTCTCAGCCTCCTaGGTGCTGGAGTTACAGGTGTGTACTCCGGTGCCC | + |
|
Preference number: 3 (lower is better) Translates to: FELDRDPFVSAS*VLELQVCTPVP Trigger: GGGCACCGGAGTACACACCTGTAACTCCAGCACTCAGGAGGCTGAGACGAAAGGGTCCCTATCCAGTTCAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228554.2 |
||
| 3UTR GCA 72 bp | AGGCAGACACCATCCACATGGTCTCTGCCTAGGTGTTaGAACCCAAGCAACCCCTTGGTCTCCACTGCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: RQTPSTWSLPRC*NPSNPLVSTAK Trigger: TTTGGCAGTGGAGACCAAGGGGTTGCTTGGGTTGCAACACCTAGGCAGAGACCATGTGGATGGTGTCTGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228554.2 |
||
| 3UTR GCA 72 bp | CCAGCACATTCAGGCAGACACCATCCACATGGTCTCTaGCTAGGTGTTGCAACCCAAGCAACCCCTTGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: PAHSGRHHPHGL*LGVATQATPWS Trigger: AGACCAAGGGGTTGCTTGGGTTGCAACACCTAGGCAGAGACCATGTGGATGGTGTCTGCCTGAATGTGCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228554.2 |
||
| 3UTR CCA 72 bp | GGTGTGGCTGCGTACACATCTGACGTCCTAGAGCCATaGGTAAAGGAGACAGGAGGATCACTGGAGCTTGCA | + |
|
Preference number: 3 (lower is better) Translates to: GVAAYTSDVLEP*VKETGGSLELA Trigger: TGCAAGCTCCAGTGATCCTCCTGTCTCCTTTACCCATGGCTCTAGGACGTCAGATGTGTACGCAGCCACACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
||
| 3UTR CCA 72 bp | GGTCTCTGCCTAGGTGTTGCAACCCAAGCAACCCCTTaGTCTCCACTGCCAAACTGTGCAGAGTCAGACACT | + |
|
Preference number: 3 (lower is better) Translates to: GLCLGVATQATP*SPLPNCAESDT Trigger: AGTGTCTGACTCTGCACAGTTTGGCAGTGGAGACCAAGGGGTTGCTTGGGTTGCAACACCTAGGCAGAGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228554.2 |
||
| 3UTR GCA 72 bp | CCGACACCCTCCTTCTCTTGCTTATGTGCATGCATGTaGCTGCTCATGCGCTTGGACAGACACACACACACA | + |
|
Preference number: 3 (lower is better) Translates to: PTPSFSCLCACM*LLMRLDRHTHT Trigger: TGTGTGTGTGTGTCTGTCCAAGCGCATGAGCAGGCACATGCATGCACATAAGCAAGAGAAGGAGGGTGTCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
||
| 3UTR GCA 72 bp | AGCAATAGAACAGGGCTCCCGACACCCTCCTTCTCTTaGTTATGTGCATGCATGTGCCTGCTCATGCGCTTG | + |
|
Preference number: 3 (lower is better) Translates to: SNRTGLPTPSFS*LCACMCLLMRL Trigger: CAAGCGCATGAGCAGGCACATGCATGCACATAAGCAAGAGAAGGAGGGTGTCGGGAGCCCTGTTCTATTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
||
| 3UTR CCA 72 bp | CCCAGCTGGTTTCAGCAGCTTAGTCACCCTAGTGGGTaGACAGAACTGAGAACTGTCTGGGTGACAGTGATG | + |
|
Preference number: 3 (lower is better) Translates to: PSWFQQLSHPSG*TELRTVWVTVM Trigger: CATCACTGTCACCCAGACAGTTCTCAGTTCTGTCCACCCACTAGGGTGACTAAGCTGCTGAAACCAGCTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
||
| 3UTR CCA 72 bp | GGTCATGCTCCATACATGTCCAGGATGGCTTTGAACTaGATAGGGACCCTTTCGTCTCAGCCTCCTGAGTGC | + |
|
Preference number: 3 (lower is better) Translates to: GHAPYMSRMALN*IGTLSSQPPEC Trigger: GCACTCAGGAGGCTGAGACGAAAGGGTCCCTATCCAGTTCAAAGCCATCCTGGACATGTATGGAGCATGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228554.2 |
||
| 3UTR-3UTR CAA 90 bp | CCAGGAAGCTCAAAGAGAAAAAGACTGGCAGAGGCCAACGTGTCATCCTCAGCTCTTTGGGGGCTCGTCTaGGATTCCTGGGTTCCGAAA | + |
|
Preference number: 3 (lower is better) Translates to: PGSSKRKRLAEANVSSSALWGLV*DSWVPK Trigger: TTTCGGAACCCAGGAATCCAAGACGAGCCCCCAAAG...AGCTGAGGATGACACGTTGGCCTCTGCCAGTCTTTTTCTCTTTGAGCTTCCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000228554.2 |
||
| 3UTR TCA 72 bp | AGCAGGCAGGTTAAGCAATACCTTTTTACTCAGCAATaGGGACTCTGCCCTGAGGGATGCGTCCCCCATGTC | + |
|
Preference number: 3 (lower is better) Translates to: SRQVKQYLFTQQ*GLCPEGCVPHV Trigger: GACATGGGGGACGCATCCCTCAGGGCAGAGTCCTCATTGCTGAGTAAAAAGGTATTGCTTAACCTGCCTGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
||
| 3UTR TCA 72 bp | CTCAGGATCAAAAGCCACCAGGCTAAATGGTGGCAGTaGATGTCACTGCCCTTCTCTGTGTGTGGGGGAACT | + |
|
Preference number: 3 (lower is better) Translates to: LRIKSHQAKWWQ*MSLPFSVCGGT Trigger: AGTTCCCCCACACACAGAGAAGGGCAGTGACATTCACTGCCACCATTTAGCCTGGTGGCTTTTGATCCTGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
||
| 3UTR GCA 72 bp | CACCCTCCTTCTCTTGCTTATGTGCATGCATGTGCCTaGTCATGCGCTTGGACAGACACACACACACACACA | + |
|
Preference number: 3 (lower is better) Translates to: HPPSLAYVHACA*SCAWTDTHTHT Trigger: TGTGTGTGTGTGTGTGTCTGTCCAAGCGCATGAGCAGGCACATGCATGCACATAAGCAAGAGAAGGAGGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
||
| 3UTR CCA 72 bp | GAGATGGCTCAGGGGGTGAAAGTGCCAACAGAGCCATaGGTTTCTCTGTATTCCCATCACCCAGGTAAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: EMAQGVKVPTEP*VSLYSHHPGKK Trigger: CTTCTTACCTGGGTGATGGGAATACAGAGAAACCCATGGCTCTGTTGGCACTTTCACCCCCTGAGCCATCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGCCACTTGGTGCAAGGACTGGAAACCAAACTCAGGTCCTCAGCATGAGCCAGCTCAGAACTGAGCCCTaGAAAAGTGGATTCAAGACA | + |
|
Preference number: 3 (lower is better) Translates to: EPLGARTGNQTQVLSMSQLRTEP*KSGFKT Trigger: TGTCTTGAATCCACTTTTCAAGGGCTCAGTTCTGAG...CTGGCTCATGCTGAGGACCTGAGTTTGGTTTCCAGTCCTTGCACCAAGTGGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
||
| 3UTR-3UTR CAA 90 bp | AGCAATACCTTTTTACTCAGCAATGAGGACTCTGCCCTGAGGGATGCGTCCCCCTACATTCCTATGGGGTaGGAAGGATTGACATGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: SNTFLLSNEDSALRDASPYIPMG*EGLTCS Trigger: GCTGCATGTCAATCCTTCCAACCCCATAGGAATGTA...GGGGGACGCATCCCTCAGGGCAGAGTCCTCATTGCTGAGTAAAAAGGTATTGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 ENSMUST00000228768.2 |
||
| 3UTR-3UTR CAA 90 bp | GGCAGCTTAGTGAGTAACACACTTACTGCAGAGGACCTAAGTTTGCTTCCCAGCTCGGGCAATGGAGATTaGAGAAGCAGGTCCTCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: GSLVSNTLTAEDLSLLPSSGNGD*RSRSSA Trigger: TGCTGAGGACCTGCTTCTCAAATCTCCATTGCCCGA...GCTGGGAAGCAAACTTAGGTCCTCTGCAGTAAGTGTGTTACTCACTAAGCTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
||
| 3UTR TCA 72 bp | CATAAAGAGTATCCAGGGGGTCGGGCAATGGAGATTTaGGAAGCAGGTCCTCAGCAGGGTTTCAATAGTGCC | + |
|
Preference number: 3 (lower is better) Translates to: HKEYPGGRAMEI*EAGPQQGFNSA Trigger: GGCACTATTGAAACCCTGCTGAGGACCTGCTTCTCAAATCTCCATTGCCCGACCCCCTGGATACTCTTTATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
||
| 3UTR GCA 72 bp | CCTTCTCTTGCTTATGTGCATGCATGTGCCTGCTCATaGGCTTGGACAGACACACACACACACACACACACA | + |
|
Preference number: 3 (lower is better) Translates to: PSLAYVHACACS*AWTDTHTHTHT Trigger: TGTGTGTGTGTGTGTGTGTGTGTCTGTCCAAGCGCATGAGCAGGCACATGCATGCACATAAGCAAGAGAAGG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
||
| 3UTR GCA 72 bp | AGCTCAGCTTTTGGTCCCTGCTGGAATCTCTCTATCTaGTCAGGGGGATCACAGAAGATTCCTGGAGTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: SSAFGPCWNLSI*SGGSQKIPGVC Trigger: ACAGACTCCAGGAATCTTCTGTGATCCCCCTGAGCAGATAGAGAGATTCCAGCAGGGACCAAAAGCTGAGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228554.2 |
||
| 3UTR CCA 72 bp | CAGGTCAGAGCCCAGGAAGCTCAAAGAGAAAAAGACTaGCAGAGGCCAACGTGTCATCCTCAGCTCTTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: QVRAQEAQREKD*QRPTCHPQLFL Trigger: AAGAAAGAGCTGAGGATGACACGTTGGCCTCTGCCAGTCTTTTTCTCTTTGAGCTTCCTGGGCTCTGACCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
||
| 3UTR-3UTR CAA 90 bp | CCAGGAAGCTCAAAGAGAAAAAGACTGGCAGAGGCCAACGTGTCATCCTCAGCTTACATTCCTATGGGGTaGGAAGGATTGACATGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: PGSSKRKRLAEANVSSSAYIPMG*EGLTCS Trigger: GCTGCATGTCAATCCTTCCAACCCCATAGGAATGTA...AGCTGAGGATGACACGTTGGCCTCTGCCAGTCTTTTTCTCTTTGAGCTTCCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
||
| 3UTR-3UTR CAA 90 bp | CAAAAAGTTCCTCACCAACTTAAAAGACAAGTACTGTGTGCCCTCAGAACTGAGGGGGCAGCTCAGCTTTaGGTCCCTGCTGGAATCTCT | + |
|
Preference number: 3 (lower is better) Translates to: QKVPHQLKRQVLCALRTEGAAQL*VPAGIS Trigger: AGAGATTCCAGCAGGGACCAAAAGCTGAGCTGCCCC...CTCAGTTCTGAGGGCACACAGTACTTGTCTTTTAAGTTGGTGAGGAACTTTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 ENSMUST00000228768.2 |
||
| 3UTR-3UTR CAA 90 bp | CCAGGAAGCTCAAAGAGAAAAAGACTGGCAGAGGCCAACGTGTCATCCTCAGCTCTCAGAACTGAGCCCTaGAAAAGTGGATTCAAGACA | + |
|
Preference number: 3 (lower is better) Translates to: PGSSKRKRLAEANVSSSALRTEP*KSGFKT Trigger: TGTCTTGAATCCACTTTTCAAGGGCTCAGTTCTGAG...AGCTGAGGATGACACGTTGGCCTCTGCCAGTCTTTTTCTCTTTGAGCTTCCTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGCCTGGTCTATGTGGGCAGAGTCTATCTCAAGAAAACAGAATCCTGTGCTGGATCCTCAGCTCTTTCTaGTTCCCTAGGCAGTTTCAC | + |
|
Preference number: 3 (lower is better) Translates to: QPGLCGQSLSQENRILCWILSSF*FPRQFH Trigger: GTGAAACTGCCTAGGGAACAAGAAAGAGCTGAGGAT...CCAGCACAGGATTCTGTTTTCTTGAGATAGACTCTGCCCACATAGACCAGGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTAAGAATAATCTAGGCTTCTTTCTGAGATACTGGTGCCCAGCTGGGGAGATGTCTGAGGGCCTGCACTaGAGTGTGCACACACACACA | + |
|
Preference number: 3 (lower is better) Translates to: FKNNLGFFLRYWCPAGEMSEGLH*SVHTHT Trigger: TGTGTGTGTGTGCACACTCAAGTGCAGGCCCTCAGA...CATCTCCCCAGCTGGGCACCAGTATCTCAGAAAGAAGCCTAGATTATTCTTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
||
| 3UTR TCA 72 bp | AGGAGTTTTTCTGGCTCCTCAAGCTACTGTCCTCTGTaGAAAGCAATGCTAGGAAGTGCGTCTCCTTGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: RSFSGSSSYCPL*KAMLGSASPCS Trigger: TGAGCAAGGAGACGCACTTCCTAGCATTGCTTTTCACAGAGGACAGTAGCTTGAGGAGCCAGAAAAACTCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
||
| 3UTR GCA 72 bp | TTTAAGAATAATCTAGGCTTCTTTCTGAGATACTGGTaGCCAGCTGGGGAGATGGCTCAGGGGGTGAAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: FKNNLGFFLRYW*PAGEMAQGVKV Trigger: CACTTTCACCCCCTGAGCCATCTCCCCAGCTGGGCACCAGTATCTCAGAAAGAAGCCTAGATTATTCTTAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
||
| 3UTR-3UTR CAA 90 bp | CAAAGATGGTGCCATTTAGGGTTCAAAAAGTTCCTCACCAACTTAAAAGACAAGGGGGCAGCTCAGCTTTaGGTCCCTGCTGGAATCTCT | + |
|
Preference number: 3 (lower is better) Translates to: QRWCHLGFKKFLTNLKDKGAAQL*VPAGIS Trigger: AGAGATTCCAGCAGGGACCAAAAGCTGAGCTGCCCC...CTTGTCTTTTAAGTTGGTGAGGAACTTTTTGAACCCTAAATGGCACCATCTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 ENSMUST00000228768.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTAAGAATAATCTAGGCTTCTTTCTGAGATACTGGTGCCCAGCTGGGGAGATGGCAGAGGACCTAAGTTaGCTTCCCAGCACCAATGTA | + |
|
Preference number: 3 (lower is better) Translates to: FKNNLGFFLRYWCPAGEMAEDLS*LPSTNV Trigger: TACATTGGTGCTGGGAAGCAAACTTAGGTCCTCTGC...CATCTCCCCAGCTGGGCACCAGTATCTCAGAAAGAAGCCTAGATTATTCTTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
||
| 3UTR-3UTR CAA 90 bp | CAAAGATGGTGCCATTTAGGGTTCAAAAAGTTCCTCACCAACTTAAAAGACAAGACTGCAGGGGAGCTCTaGAGGCAGAATGAGAGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: QRWCHLGFKKFLTNLKDKTAGEL*RQNERV Trigger: CACCCTCTCATTCTGCCTCAAGAGCTCCCCTGCAGT...CTTGTCTTTTAAGTTGGTGAGGAACTTTTTGAACCCTAAATGGCACCATCTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000228554.2 |
||
| 3UTR TCA 72 bp | CCATCCCTCTCTACATTCCTATGGGGTTGGAAGGATTaGCATGCAGCCTTTTCCAAAGTGGACAAAGATGGT | + |
|
Preference number: 3 (lower is better) Translates to: PSLSTFLWGWKD*HAAFSKVDKDG Trigger: ACCATCTTTGTCCACTTTGGAAAAGGCTGCATGTCAATCCTTCCAACCCCATAGGAATGTAGAGAGGGATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 ENSMUST00000228768.2 |
||
| 3UTR TCA 72 bp | ACTCAAGAATTGGAGGCAGGAAGATCACAACAAACTTaGTTGAGGTCAGCCTGGTCTATGTGGGCAGAGTCT | + |
|
Preference number: 3 (lower is better) Translates to: TQELEAGRSQQT*LRSAWSMWAES Trigger: AGACTCTGCCCACATAGACCAGGCTGACCTCAATCAAGTTTGTTGTGATCTTCCTGCCTCCAATTCTTGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
||
| 3UTR GCA 72 bp | CCTCTCTACATTCCTATGGGGTTGGAAGGATTGACATaGAGCCTTTTCCAAAGTGGACAAAGATGGTGCCAT | + |
|
Preference number: 3 (lower is better) Translates to: PLYIPMGLEGLT*SLFQSGQRWCH Trigger: ATGGCACCATCTTTGTCCACTTTGGAAAAGGCTGCATGTCAATCCTTCCAACCCCATAGGAATGTAGAGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 ENSMUST00000228768.2 |
||
| 3UTR CCA 72 bp | CTCAGCAGGGTTTCAATAGTGCCTACTAGAACCACTTaGAGAGGCAGCTTAGTGAGTAACACACTTACTGCA | + |
|
Preference number: 3 (lower is better) Translates to: LSRVSIVPTRTT*RGSLVSNTLTA Trigger: TGCAGTAAGTGTGTTACTCACTAAGCTGCCTCTCCAAGTGGTTCTAGTAGGCACTATTGAAACCCTGCTGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
||
| 3UTR-3UTR CAA 90 bp | ATACCTCGCTTTGGTTTATCATTTGGAAACTATGTCCTCAGGGAGTCTAAGGAGCCCAGGACTCAAGAATaGGAGGCAGGAAGATCACAA | + |
|
Preference number: 3 (lower is better) Translates to: IPRFGLSFGNYVLRESKEPRTQE*EAGRSQ Trigger: TTGTGATCTTCCTGCCTCCAATTCTTGAGTCCTGGG...CTCCTTAGACTCCCTGAGGACATAGTTTCCAAATGATAAACCAAAGCGAGGTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
||
| 3UTR-3UTR CAA 90 bp | AACACACTTACTGCAGAGGACCTAAGTTTGCTTCCCAGCACCAATGTAAGGAAGAGGAAGTGCGTCTCCTaGCTCAGAATCAGAAATCTA | + |
|
Preference number: 3 (lower is better) Translates to: NTLTAEDLSLLPSTNVRKRKCVS*LRIRNL Trigger: TAGATTTCTGATTCTGAGCAAGGAGACGCACTTCCT...CTTCCTTACATTGGTGCTGGGAAGCAAACTTAGGTCCTCTGCAGTAAGTGTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
||
| 3UTR TCA 72 bp | AAGAATTGGAGGCAGGAAGATCACAACAAACTTGATTaGGGTCAGCCTGGTCTATGTGGGCAGAGTCTATCT | + |
|
Preference number: 3 (lower is better) Translates to: KNWRQEDHNKLD*GQPGLCGQSLS Trigger: AGATAGACTCTGCCCACATAGACCAGGCTGACCTCAATCAAGTTTGTTGTGATCTTCCTGCCTCCAATTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
||
| 3UTR GCA 72 bp | TGGGAGTGTAACCCATTGATAAAAGGGCTTGACTTCTaGAGAATCTGGATGAGTCAAGGTCATCACCAGCTA | + |
|
Preference number: 3 (lower is better) Translates to: WECNPLIKGLDF*RIWMSQGHHQL Trigger: TAGCTGGTGATGACCTTGACTCATCCAGATTCTGCAGAAGTCAAGCCCTTTTATCAATGGGTTACACTCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
||
| 3UTR CCA 72 bp | GAGTCTATCTCAAGAAAACAGAATCCTGTGCTGGCCTaGGAGTGTAACCCATTGATAAAAGGGCTTGACTTC | + |
|
Preference number: 3 (lower is better) Translates to: ESISRKQNPVLA*ECNPLIKGLDF Trigger: GAAGTCAAGCCCTTTTATCAATGGGTTACACTCCCAGGCCAGCACAGGATTCTGTTTTCTTGAGATAGACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
||
| 3UTR TCA 72 bp | ATTATGTATGTCTGCATAGGAGATGTACACATTGAGTaGGTGCCCTCAGAGGCTAGAGAGGGTTTCAGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: IMYVCIGDVHIE*VPSEAREGFRK Trigger: CTTTCTGAAACCCTCTCTAGCCTCTGAGGGCACTCACTCAATGTGTACATCTCCTATGCAGACATACATAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
||
| 3UTR TCA 72 bp | CTACATTATAAGAGTTCACAGTCTGCCTGGGCGACATaGACTGAGGACAGGGACATGAACAAAAACCAAAAA | + |
|
Preference number: 3 (lower is better) Translates to: LHYKSSQSAWAT*TEDRDMNKNQK Trigger: TTTTTGGTTTTTGTTCATGTCCCTGTCCTCAGTTCATGTCGCCCAGGCAGACTGTGAACTCTTATAATGTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
||
| 3UTR-3UTR CAA 90 bp | TCAGTGATAGACCAGACCCTGTCTCACGGGAATAAAGTAGAAAGCAATAGAACAGCTTTGGTTTATCATTaGGAAACTATGTCCTCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: SVIDQTLSHGNKVESNRTALVYH*ETMSSG Trigger: CCCTGAGGACATAGTTTCCAAATGATAAACCAAAGC...TGTTCTATTGCTTTCTACTTTATTCCCGTGAGACAGGGTCTGGTCTATCACTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
||
| CDS-3UTR GCA 90 bp | CCCAGGAAGCTCAAAGAGAAAAAGACTGGCAGAGGCCAACGTGTCATCCTCAGCGGTGGCAAGCGCCCCTaGCAGGCCCTCCGTGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: PRKLKEKKTGRGQRVILSGGKRP*QALRGH Trigger: ATGGCCACGGAGGGCCTGGCAGGGGCGCTTGCCACC...GCTGAGGATGACACGTTGGCCTCTGCCAGTCTTTTTCTCTTTGAGCTTCCTGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
||
| CDS-3UTR CCA 90 bp | TCTGCCCTGAGGGATGCGTCCCCCATGTCCCATCCCTCTCTACATTCCTATGGGGGACAGCAGTGTCACTaGCTCACAGAGCAGCCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SALRDASPMSHPSLHSYGGQQCH*LTEQPC Trigger: GCAGGGCTGCTCTGTGAGCCAGTGACACTGCTGTCC...CCCATAGGAATGTAGAGAGGGATGGGACATGGGGGACGCATCCCTCAGGGCAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228768.2 |
||
| CDS-3UTR TCA 90 bp | CTCCCTTTGGGCTCAATGTGTGGTCCCTGCCCCCTCAAAATGTGCAATGAGATCCCTCATCCTGCTCGTTaGGGAACACGGCCAGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: LPLGSMCGPCPLKMCNEIPHPAR*GTRPAP Trigger: TGGTGCTGGCCGTGTTCCTCAACGAGCAGGATGAGG...GATCTCATTGCACATTTTGAGGGGGCAGGGACCACACATTGAGCCCAAAGGGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089049.4 |
||
| CDS-3UTR TCA 90 bp | GGAAACCAAACTCAGGTCCTCAGCATGAGCCAGCCGCATATGCTCTTAACTGCTACTCCGCCTGCTCGTTaGGGAACACGGCCAGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: GNQTQVLSMSQPHMLLTATPPAR*GTRPAP Trigger: TGGTGCTGGCCGTGTTCCTCAACGAGCAGGCGGAGT...AGCAGTTAAGAGCATATGCGGCTGGCTCATGCTGAGGACCTGAGTTTGGTTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228554.2 |
||
| 3UTR CAA 72 bp | TTTTCTCTGCCTCAGAGGGAGGGGGCAGCTCAGCTTTaGGTCCCTGCTGGAATCTCTCTATCTGCTCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: FSLPQREGAAQL*VPAGISLSAQG Trigger: CCCCTGAGCAGATAGAGAGATTCCAGCAGGGACCAAAAGCTGAGCTGCCCCCTCCCTCTGAGGCAGAGAAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228554.2 |
||
| CDS-3UTR GCA 90 bp | CAATGTGTGGTCCCTGCCCCCTCAAAATGTGCAATGAGATCCCTGACTGCCAGCCCCCTTGGTCTCCACTaGCAAACTGTGCAGAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: QCVVPAPSKCAMRSLTASPLGLH*QTVQSQ Trigger: CTGACTCTGCACAGTTTGGCAGTGGAGACCAAGGGG...GCTGGCAGTCAGGGATCTCATTGCACATTTTGAGGGGGCAGGGACCACACATTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228768.2 |
||
| 3UTR CAA 72 bp | TGGTCTCTGCCTAGGTGTTGCAACCCAAGCAACCCCTaGGTCTCCACTGCCAAACTGTGCAGAGTCAGACAC | + |
|
Preference number: 4 (lower is better) Translates to: WSLPRCCNPSNP*VSTAKLCRVRH Trigger: GTGTCTGACTCTGCACAGTTTGGCAGTGGAGACCAAGGGGTTGCTTGGGTTGCAACACCTAGGCAGAGACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228554.2 |
||
| CDS-3UTR CCA 90 bp | GGCTCAATGTGTGGTCCCTGCCCCCTCAAAATGTGCAATGAGATCCCTGACTGCGCATGGCCTCCACGATaGTTTCTCCTGGTTCCATTC | + |
|
Preference number: 4 (lower is better) Translates to: GSMCGPCPLKMCNEIPDCAWPPR*FLLVPF Trigger: GAATGGAACCAGGAGAAACCATCGTGGAGGCCATGC...GCAGTCAGGGATCTCATTGCACATTTTGAGGGGGCAGGGACCACACATTGAGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228768.2 |
||
| CDS-3UTR CCA 90 bp | AGGACTGGAAACCAAACTCAGGTCCTCAGCATGAGCCAGCCGCATATGCTCTTATCACCTCCCGCTGCATaGCCTCCACGATGGTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RTGNQTQVLSMSQPHMLLSPPAA*PPRWFL Trigger: GAGAAACCATCGTGGAGGCCATGCAGCGGGAGGTGA...TAAGAGCATATGCGGCTGGCTCATGCTGAGGACCTGAGTTTGGTTTCCAGTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089049.4 |
||
| CDS-3UTR CCA 90 bp | CCCTCAAAATGTGCAATGAGATCCCTGACTGCCAGCCTTTTCTCTGCCTCAGAGTCACCTCCCGCTGCATaGCCTCCACGATGGTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PSKCAMRSLTASLFSASESPPAA*PPRWFL Trigger: GAGAAACCATCGTGGAGGCCATGCAGCGGGAGGTGA...CTCTGAGGCAGAGAAAAGGCTGGCAGTCAGGGATCTCATTGCACATTTTGAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228768.2 |
||
| CDS-3UTR CCA 90 bp | ATGTCCCATCCCTCTCTACATTCCTATGGGGTTGGAAGGATTGACATGCAGCCTGGACAGCAGTGTCACTaGCTCACAGAGCAGCCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: MSHPSLHSYGVGRIDMQPGQQCH*LTEQPC Trigger: GCAGGGCTGCTCTGTGAGCCAGTGACACTGCTGTCC...AGGCTGCATGTCAATCCTTCCAACCCCATAGGAATGTAGAGAGGGATGGGACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228768.2 |
||
| CDS-3UTR CCA 90 bp | GGCTCAATGTGTGGTCCCTGCCCCCTCAAAATGTGCAATGAGATCCCTGACTGCCTCGTCTTGGATTCCTaGGTTCCGAAAAGCCACGGT | + |
|
Preference number: 4 (lower is better) Translates to: GSMCGPCPLKMCNEIPDCLVLDS*VPKSHG Trigger: ACCGTGGCTTTTCGGAACCCAGGAATCCAAGACGAG...GCAGTCAGGGATCTCATTGCACATTTTGAGGGGGCAGGGACCACACATTGAGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228768.2 |
||
| 3UTR CAA 72 bp | ACTGGCAGAGGCCAACGTGTCATCCTCAGCTCTTTCTaGTTCCCTAGGCAGTTTCACCAGACCGAACCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: TGRGQRVILSSF*FPRQFHQTEPF Trigger: GAACGGTTCGGTCTGGTGAAACTGCCTAGGGAACAAGAAAGAGCTGAGGATGACACGTTGGCCTCTGCCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
||
| CDS-3UTR CCA 90 bp | TACTGGTGCCCAGCTGGGGAGATGGCTCAGGGGGTGAAAGTGCCAACAGAGCCAATCACAGAAGATTCCTaGAGTCTGTACAGAAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: YWCPAGEMAQGVKVPTEPITEDS*SLYRSS Trigger: ACTGCTTCTGTACAGACTCCAGGAATCTTCTGTGAT...TGGCTCTGTTGGCACTTTCACCCCCTGAGCCATCTCCCCAGCTGGGCACCAGTA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089049.4 |
||
| 3UTR CAA 72 bp | TCAGAAAGCCTGAAGCTGGAGGTGGTTGTGAGCCACTaGGTGCAAGGACTGGAAACCAAACTCAGGTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SESLKLEVVVSH*VQGLETKLRSS Trigger: TGAGGACCTGAGTTTGGTTTCCAGTCCTTGCACCAAGTGGCTCACAACCACCTCCAGCTTCAGGCTTTCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
||
| CDS-3UTR GCA 90 bp | ATGGTGCCATTTAGGGTTCAAAAAGTTCCTCACCAACTTAAAAGACAAGTACTGGGTGGCAAGCGCCCCTaGCAGGCCCTCCGTGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: MVPFRVQKVPHQLKRQVLGGKRP*QALRGH Trigger: ATGGCCACGGAGGGCCTGGCAGGGGCGCTTGCCACC...CAGTACTTGTCTTTTAAGTTGGTGAGGAACTTTTTGAACCCTAAATGGCACCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
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| CDS-3UTR GCA 90 bp | CATCCCTCTCTACATTCCTATGGGGTTGGAAGGATTGACATGCAGCCTTTTCCATCCTTCACCTCCCGCTaGATGGCCTCCACGATGGTT | + |
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Preference number: 4 (lower is better) Translates to: HPSLHSYGVGRIDMQPFPSFTSR*MASTMV Trigger: AACCATCGTGGAGGCCATGCAGCGGGAGGTGAAGGA...TGGAAAAGGCTGCATGTCAATCCTTCCAACCCCATAGGAATGTAGAGAGGGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228768.2 |
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| CDS-3UTR GCA 90 bp | TGTGGTCCCTGCCCCCTCAAAATGTGCAATGAGATCCCTGACTGCCAGCCTTTTCCTAGCTCTACCAGGTaGAGAACATCATGGGCTCTA | + |
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Preference number: 4 (lower is better) Translates to: CGPCPLKMCNEIPDCQPFPSSTR*RTSWAL Trigger: TAGAGCCCATGATGTTCTGCACCTGGTAGAGCTAGG...AAAAGGCTGGCAGTCAGGGATCTCATTGCACATTTTGAGGGGGCAGGGACCACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228768.2 |
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| CDS-3UTR GCA 90 bp | GGCAGCTTAGTGAGTAACACACTTACTGCAGAGGACCTAAGTTTGCTTCCCAGCCCCCTTGGTCTCCACTaGCAAACTGTGCAGAGTCAG | + |
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Preference number: 4 (lower is better) Translates to: GSLVSNTLTAEDLSLLPSPLGLH*QTVQSQ Trigger: CTGACTCTGCACAGTTTGGCAGTGGAGACCAAGGGG...GCTGGGAAGCAAACTTAGGTCCTCTGCAGTAAGTGTGTTACTCACTAAGCTGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089049.4 |
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| CDS-3UTR CCA 90 bp | AGGACTGGAAACCAAACTCAGGTCCTCAGCATGAGCCAGCCGCATATGCTCTTAGCATGGCCTCCACGATaGTTTCTCCTGGTTCCATTC | + |
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Preference number: 4 (lower is better) Translates to: RTGNQTQVLSMSQPHMLLAWPPR*FLLVPF Trigger: GAATGGAACCAGGAGAAACCATCGTGGAGGCCATGC...TAAGAGCATATGCGGCTGGCTCATGCTGAGGACCTGAGTTTGGTTTCCAGTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089049.4 |
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| CDS-3UTR CCA 90 bp | AGGACTGGAAACCAAACTCAGGTCCTCAGCATGAGCCAGCCGCATATGCTCTTACTTGTTGGCAGAATTTaGCGCCTAGCTCTACCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: RTGNQTQVLSMSQPHMLLLVGRI*RLALPG Trigger: ACCTGGTAGAGCTAGGCGCCAAATTCTGCCAACAAG...TAAGAGCATATGCGGCTGGCTCATGCTGAGGACCTGAGTTTGGTTTCCAGTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089049.4 |
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| CDS-3UTR CCA 90 bp | CCATGTCCCATCCCTCTCTACATTCCTATGGGGTTGGAAGGATTGACATGCAGCCTTGTTGGCAGAATTTaGCGCCTAGCTCTACCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PCPIPLYIPMGLEGLTCSLVGRI*RLALPG Trigger: ACCTGGTAGAGCTAGGCGCCAAATTCTGCCAACAAG...GCTGCATGTCAATCCTTCCAACCCCATAGGAATGTAGAGAGGGATGGGACATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228768.2 |
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| 3UTR CAA 72 bp | AGCTCCAGGGGATCTGATGCCTCTGAGGGCCTGCACTaGAGTGTGCACACACACACACATAAACAGAAATCT | + |
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Preference number: 4 (lower is better) Translates to: SSRGSDASEGLH*SVHTHTHKQKS Trigger: AGATTTCTGTTTATGTGTGTGTGTGTGCACACTCAAGTGCAGGCCCTCAGAGGCATCAGATCCCCTGGAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
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| CDS-3UTR CCA 90 bp | AACACACTTACTGCAGAGGACCTAAGTTTGCTTCCCAGCACCAATGTAAGGAAGCTCGTCTTGGATTCCTaGGTTCCGAAAAGCCACGGT | + |
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Preference number: 4 (lower is better) Translates to: NTLTAEDLSLLPSTNVRKLVLDS*VPKSHG Trigger: ACCGTGGCTTTTCGGAACCCAGGAATCCAAGACGAG...CTTCCTTACATTGGTGCTGGGAAGCAAACTTAGGTCCTCTGCAGTAAGTGTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089049.4 |
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| 3UTR CAA 72 bp | CCCATCCCTCTCTACATTCCTATGGGGTTGGAAGGATaGACATGCAGCCTTTTCCAAAGTGGACAAAGATGG | + |
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Preference number: 4 (lower is better) Translates to: PIPLYIPMGLEG*TCSLFQSGQRW Trigger: CCATCTTTGTCCACTTTGGAAAAGGCTGCATGTCAATCCTTCCAACCCCATAGGAATGTAGAGAGGGATGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 ENSMUST00000228768.2 |
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| 3UTR CAA 72 bp | GACTCAAGAATTGGAGGCAGGAAGATCACAACAAACTaGATTGAGGTCAGCCTGGTCTATGTGGGCAGAGTC | + |
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Preference number: 4 (lower is better) Translates to: DSRIGGRKITTN*IEVSLVYVGRV Trigger: GACTCTGCCCACATAGACCAGGCTGACCTCAATCAAGTTTGTTGTGATCTTCCTGCCTCCAATTCTTGAGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
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| CDS-3UTR CCA 90 bp | AAAAGACAAGTACTGTGTGCCCTCAGAACTGAGCCCTTGAAAAGTGGATTCAAGCCCGGCATTCCCTCTTaGCCTCCTGTATCATCAACA | + |
|
Preference number: 4 (lower is better) Translates to: KRQVLCALRTEPLKSGFKPGIPS*PPVSST Trigger: TGTTGATGATACAGGAGGCCAAGAGGGAATGCCGGG...CTTGAATCCACTTTTCAAGGGCTCAGTTCTGAGGGCACACAGTACTTGTCTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089049.4 |
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| CDS-3UTR GCA 90 bp | GTGCCATTTAGGGTTCAAAAAGTTCCTCACCAACTTAAAAGACAAGTACTGTGTTCCTTCACCTCCCGCTaGATGGCCTCCACGATGGTT | + |
|
Preference number: 4 (lower is better) Translates to: VPFRVQKVPHQLKRQVLCSFTSR*MASTMV Trigger: AACCATCGTGGAGGCCATGCAGCGGGAGGTGAAGGA...ACACAGTACTTGTCTTTTAAGTTGGTGAGGAACTTTTTGAACCCTAAATGGCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228768.2 |
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| CDS-3UTR GCA 90 bp | TTTAGGGTTCAAAAAGTTCCTCACCAACTTAAAAGACAAGTACTGTGTGCCCTCGGCAGAATGAGAGGGTaGATGGCTTGTTGGCAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: FRVQKVPHQLKRQVLCALGRMRG*MACWQN Trigger: ATTCTGCCAACAAGCCATGCACCCTCTCATTCTGCC...GAGGGCACACAGTACTTGTCTTTTAAGTTGGTGAGGAACTTTTTGAACCCTAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228768.2 |
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| 3UTR CAA 72 bp | AGGTGTGTGCCATCATACCTCGCTTTGGTTTATCATTaGGAAACTATGTCCTCAGGGAGTCTAAGGAGGATT | + |
|
Preference number: 4 (lower is better) Translates to: RCVPSYLALVYH*ETMSSGSLRRI Trigger: AATCCTCCTTAGACTCCCTGAGGACATAGTTTCCAAATGATAAACCAAAGCGAGGTATGATGGCACACACCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
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| 3UTR CAA 72 bp | TGCTGGGATAAAAGGTGTGTGCCATCATACCTCGCTTaGGTTTATCATTTGGAAACTATGTCCTCAGGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: CWDKRCVPSYLA*VYHLETMSSGS Trigger: ACTCCCTGAGGACATAGTTTCCAAATGATAAACCAAAGCGAGGTATGATGGCACACACCTTTTATCCCAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
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| CDS-3UTR GCA 90 bp | CTGCACTTGAGTGTGCACACACACACACATAAACAGAAATCTAAAAAGACCTTTGGCAGAATGAGAGGGTaGATGGCTTGTTGGCAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: LHLSVHTHTHKQKSKKTFGRMRG*MACWQN Trigger: ATTCTGCCAACAAGCCATGCACCCTCTCATTCTGCC...AAAGGTCTTTTTAGATTTCTGTTTATGTGTGTGTGTGTGCACACTCAAGTGCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089049.4 |
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| CDS-3UTR CCA 90 bp | AAAAGACAAGTACTGTGTGCCCTCAGAACTGAGCCCTTGAAAAGTGGATTCAAGATCACAGAAGATTCCTaGAGTCTGTACAGAAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: KRQVLCALRTEPLKSGFKITEDS*SLYRSS Trigger: ACTGCTTCTGTACAGACTCCAGGAATCTTCTGTGAT...CTTGAATCCACTTTTCAAGGGCTCAGTTCTGAGGGCACACAGTACTTGTCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228768.2 |
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| CDS GCA 90 bp | CCTCTCCTCCACGGACAGCAGTGTCACTGGCTCACAGAGCAGCCCTaGCTCCTCCTTCACCTCCCGCTGCATGGCCTCCACGATGGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: PLLHGQQCHWLTEQP*LLLHLPLHGLHDGF Trigger: GAAACCATCGTGGAGGCCATGCAGCGGGAGGTGAAGGAGGAGGCAGGGCTGCTCTGTGAGCCAGTGACACTGCTGTCCGTGGAGGAGAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228768.2 |
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| CDS GCA 90 bp | CCGCTGCATGGCCTCCACGATGGTTTCTCCTGGTTCCATTCTTCCTaGAGGGAGGTACCATGTCCCCCGGCATTCCCTCTTGGCCTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: PLHGLHDGFSWFHSS*REVPCPPAFPLGLL Trigger: CAGGAGGCCAAGAGGGAATGCCGGGGGACATGGTACCTCCCTGCAGGAAGAATGGAACCAGGAGAAACCATCGTGGAGGCCATGCAGCGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228768.2 |
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| CDS CCA 90 bp | GCTCTAAGCGGTGTGGGCAGGGAGACCCGTGGGTACCAGCCGGCCTaGAGGGACTCAGAATCAGCATCTTTGGAAGTCTTGAGAACTCCG | + |
|
Preference number: 5 (lower is better) Translates to: ALSGVGRETRGYQPA*RDSESASLEVLRTP Trigger: CGGAGTTCTCAAGACTTCCAAAGATGCTGATTCTGAGTCCCTCCAGGCCGGCTGGTACCCACGGGTCTCCCTGCCCACACCGCTTAGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 ENSMUST00000228768.2 |
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| CDS CCA 90 bp | TGTTGGCAGAATTTGGCGCCTAGCTCTACCAGGTGCAGAACATCATaGGCTCTAAGCGGTGTGGGCAGGGAGACCCGTGGGTACCAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: CWQNLAPSSTRCRTS*ALSGVGRETRGYQP Trigger: CGGCTGGTACCCACGGGTCTCCCTGCCCACACCGCTTAGAGCCCATGATGTTCTGCACCTGGTAGAGCTAGGCGCCAAATTCTGCCAACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228768.2 |
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| CDS GCA 90 bp | GGGTGCATGGCTTGTTGGCAGAATTTGGCGCCTAGCTCTACCAGGTaGAGAACATCATGGGCTCTAAGCGGTGTGGGCAGGGAGACCCGT | + |
|
Preference number: 5 (lower is better) Translates to: GCMACWQNLAPSSTR*RTSWALSGVGRETR Trigger: ACGGGTCTCCCTGCCCACACCGCTTAGAGCCCATGATGTTCTGCACCTGGTAGAGCTAGGCGCCAAATTCTGCCAACAAGCCATGCACCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228768.2 |
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| CDS-3UTR CAA 90 bp | GGACTCTGCCCTGAGGGATGCGTCCCCCATGTCCCATCCCTCTCTACATTCCTAACTGCAGGGGAGCTCTaGAGGCAGAATGAGAGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: GLCPEGCVPHVPSLSTFLTAGEL*RQNERV Trigger: CACCCTCTCATTCTGCCTCAAGAGCTCCCCTGCAGT...TAGGAATGTAGAGAGGGATGGGACATGGGGGACGCATCCCTCAGGGCAGAGTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228768.2 |
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| CDS-3UTR CAA 90 bp | GGCTCAATGTGTGGTCCCTGCCCCCTCAAAATGTGCAATGAGATCCCTGACTGCAACTCCGCCTGCTCGTaGAGGAACACGGCCAGCACC | + |
|
Preference number: 5 (lower is better) Translates to: GSMCGPCPLKMCNEIPDCNSACS*RNTAST Trigger: GGTGCTGGCCGTGTTCCTCAACGAGCAGGCGGAGTT...GCAGTCAGGGATCTCATTGCACATTTTGAGGGGGCAGGGACCACACATTGAGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228554.2 |
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| CDS TCA 90 bp | CCAGCCGTTGGCAGACCACACTGCAGGGGAGCTCTTGAGGCAGAATaGGAGGGTGCATGGCTTGTTGGCAGAATTTGGCGCCTAGCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: PAVGRPHCRGALEAE*EGAWLVGRIWRLAL Trigger: TAGAGCTAGGCGCCAAATTCTGCCAACAAGCCATGCACCCTCTCATTCTGCCTCAAGAGCTCCCCTGCAGTGTGGTCTGCCAACGGCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228768.2 |
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| CDS-3UTR CAA 90 bp | TTCTCTGCCTCAGAGGGAGGGGGCAGCTCAGCTTTTGGTCCCTGCTGGAATCTCCTTTGGGGGCTCGTCTaGGATTCCTGGGTTCCGAAA | + |
|
Preference number: 5 (lower is better) Translates to: FSASEGGGSSAFGPCWNLLWGLV*DSWVPK Trigger: TTTCGGAACCCAGGAATCCAAGACGAGCCCCCAAAG...GAGATTCCAGCAGGGACCAAAAGCTGAGCTGCCCCCTCCCTCTGAGGCAGAGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228768.2 |
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| CDS-3UTR CAA 90 bp | TGCCCTGAGGGATGCGTCCCCCATGTCCCATCCCTCTCTACATTCCTATGGGGTTCAGAATCAGCATCTTaGGAAGTCTTGAGAACTCCG | + |
|
Preference number: 5 (lower is better) Translates to: CPEGCVPHVPSLSTFLWGSESAS*EVLRTP Trigger: CGGAGTTCTCAAGACTTCCAAAGATGCTGATTCTGA...ACCCCATAGGAATGTAGAGAGGGATGGGACATGGGGGACGCATCCCTCAGGGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 ENSMUST00000228768.2 |
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| CDS-3UTR CAA 90 bp | AGGACTGGAAACCAAACTCAGGTCCTCAGCATGAGCCAGCCGCATATGCTCTTAGCATCTTTGGAAGTCTaGAGAACTCCGCCTGCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: RTGNQTQVLSMSQPHMLLASLEV*RTPPAR Trigger: ACGAGCAGGCGGAGTTCTCAAGACTTCCAAAGATGC...TAAGAGCATATGCGGCTGGCTCATGCTGAGGACCTGAGTTTGGTTTCCAGTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228554.2 |
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| CDS-3UTR CAA 90 bp | AAAAGACAAGTACTGTGTGCCCTCAGAACTGAGCCCTTGAAAAGTGGATTCAAGCCCCGGCATTCCCTCTaGGCCTCCTGTATCATCAAC | + |
|
Preference number: 5 (lower is better) Translates to: KRQVLCALRTEPLKSGFKPRHSL*ASCIIN Trigger: GTTGATGATACAGGAGGCCAAGAGGGAATGCCGGGG...CTTGAATCCACTTTTCAAGGGCTCAGTTCTGAGGGCACACAGTACTTGTCTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000089049.4 |
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| CDS-3UTR CAA 90 bp | CAAAGATGGTGCCATTTAGGGTTCAAAAAGTTCCTCACCAACTTAAAAGACAAGACCTCATCCTGCTCGTaGAGGAACACGGCCAGCACC | + |
|
Preference number: 5 (lower is better) Translates to: QRWCHLGFKKFLTNLKDKTSSCS*RNTAST Trigger: GGTGCTGGCCGTGTTCCTCAACGAGCAGGATGAGGT...CTTGTCTTTTAAGTTGGTGAGGAACTTTTTGAACCCTAAATGGCACCATCTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089049.4 |
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| CDS-3UTR CAA 90 bp | CAAAAAGTTCCTCACCAACTTAAAAGACAAGTACTGTGTGCCCTCAGAACTGAGCTTTGGGGGCTCGTCTaGGATTCCTGGGTTCCGAAA | + |
|
Preference number: 5 (lower is better) Translates to: QKVPHQLKRQVLCALRTELWGLV*DSWVPK Trigger: TTTCGGAACCCAGGAATCCAAGACGAGCCCCCAAAG...CTCAGTTCTGAGGGCACACAGTACTTGTCTTTTAAGTTGGTGAGGAACTTTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228768.2 |
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| CDS-3UTR CAA 90 bp | ATACCTCGCTTTGGTTTATCATTTGGAAACTATGTCCTCAGGGAGTCTAAGGAGTCAGAATCAGCATCTTaGGAAGTCTTGAGAACTCCG | + |
|
Preference number: 5 (lower is better) Translates to: IPRFGLSFGNYVLRESKESESAS*EVLRTP Trigger: CGGAGTTCTCAAGACTTCCAAAGATGCTGATTCTGA...CTCCTTAGACTCCCTGAGGACATAGTTTCCAAATGATAAACCAAAGCGAGGTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
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| CDS-3UTR CAA 90 bp | CTGCACTTGAGTGTGCACACACACACACATAAACAGAAATCTAAAAAGACCTTTTCAGAATCAGCATCTTaGGAAGTCTTGAGAACTCCG | + |
|
Preference number: 5 (lower is better) Translates to: LHLSVHTHTHKQKSKKTFSESAS*EVLRTP Trigger: CGGAGTTCTCAAGACTTCCAAAGATGCTGATTCTGA...AAAGGTCTTTTTAGATTTCTGTTTATGTGTGTGTGTGTGCACACTCAAGTGCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 |
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| CDS CCA 72 bp | GGTGTGGGCAGGGAGACCCGTGGGTACCAGCCGGCCTaGAGGGACTCAGAATCAGCATCTTTGGAAGTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: GVGRETRGYQPA*RDSESASLEVL Trigger: CAAGACTTCCAAAGATGCTGATTCTGAGTCCCTCCAGGCCGGCTGGTACCCACGGGTCTCCCTGCCCACACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089049.4 ENSMUST00000228554.2 ENSMUST00000228768.2 |
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| CDS CCA 72 bp | AATTTGGCGCCTAGCTCTACCAGGTGCAGAACATCATaGGCTCTAAGCGGTGTGGGCAGGGAGACCCGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: NLAPSSTRCRTS*ALSGVGRETRG Trigger: CCCACGGGTCTCCCTGCCCACACCGCTTAGAGCCCATGATGTTCTGCACCTGGTAGAGCTAGGCGCCAAATT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228768.2 |
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| CDS GCA 72 bp | GGCCTCCACGATGGTTTCTCCTGGTTCCATTCTTCCTaGAGGGAGGTACCATGTCCCCCGGCATTCCCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: GLHDGFSWFHSS*REVPCPPAFPL Trigger: AAGAGGGAATGCCGGGGGACATGGTACCTCCCTGCAGGAAGAATGGAACCAGGAGAAACCATCGTGGAGGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228768.2 |
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| CDS CAA 90 bp | TCCATTCTTCCTGCAGGGAGGTACCATGTCCCCCGGCATTCCCTCTaGGCCTCCTGTATCATCAACACCTCATCCTGCTCGTTGAGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: SILPAGRYHVPRHSL*ASCIINTSSCSLRN Trigger: GTTCCTCAACGAGCAGGATGAGGTGTTGATGATACAGGAGGCCAAGAGGGAATGCCGGGGGACATGGTACCTCCCTGCAGGAAGAATGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089049.4 |
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| CDS TCA 72 bp | CCTGGAGGGACTCAGAATCAGCATCTTTGGAAGTCTTaGGAACTCCGCCTGCTCGTTGAGGAACACGGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: PGGTQNQHLWKS*ELRLLVEEHGQ Trigger: CTGGCCGTGTTCCTCAACGAGCAGGCGGAGTTCTCAAGACTTCCAAAGATGCTGATTCTGAGTCCCTCCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228554.2 |
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| CDS CAA 72 bp | GGCAGAATGAGAGGGTGCATGGCTTGTTGGCAGAATTaGGCGCCTAGCTCTACCAGGTGCAGAACATCATGG | + |
|
Preference number: 6 (lower is better) Translates to: GRMRGCMACWQN*APSSTRCRTSW Trigger: CCATGATGTTCTGCACCTGGTAGAGCTAGGCGCCAAATTCTGCCAACAAGCCATGCACCCTCTCATTCTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228768.2 |
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| CDS TCA 72 bp | CCTGGAGGGACTCAGAATCAGCATCTTTGGAAGTCTTaGGAACTCCGCCTGTTGGTCGAGCGAGGAACACAA | + |
|
Preference number: 6 (lower is better) Translates to: PGGTQNQHLWKS*ELRLLVERGTQ Trigger: TTGTGTTCCTCGCTCGACCAACAGGCGGAGTTCTCAAGACTTCCAAAGATGCTGATTCTGAGTCCCTCCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089049.4 ENSMUST00000228768.2 |
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