Pregenerated sensors for NUDT17 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028100Ensembl transcript IDs: ENSMUST00000029742.9, ENSMUST00000171249.6, ENSMUST00000200387.2
Found 186 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAGGGCAAACTTGGTTCCAGCGCCGATCCTCTCTTTGTCCTCCTCTaGTGTGGTTGGGGTTGTCCGCATGAGTGTGGGCATGGGCAGGAC | + |
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Preference number: 1 (lower is better) Translates to: EGKLGSSADPLFVLL*CGWGCPHECGHGQD Trigger: GTCCTGCCCATGCCCACACTCATGCGGACAACCCCAACCACAGCAGAGGAGGACAAAGAGAGGATCGGCGCTGGAACCAAGTTTGCCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200387.2 |
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| 3UTR CCA 90 bp | CTTGGTTCCAGCGCCGATCCTCTCTTTGTCCTCCTCTGCTGTGGTTaGGGTTGTCCGCATGAGTGTGGGCATGGGCAGGACCAGAGGTTG | + |
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Preference number: 1 (lower is better) Translates to: LGSSADPLFVLLCCG*GCPHECGHGQDQRL Trigger: CAACCTCTGGTCCTGCCCATGCCCACACTCATGCGGACAACCCCAACCACAGCAGAGGAGGACAAAGAGAGGATCGGCGCTGGAACCAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200387.2 |
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| 3UTR TCA 90 bp | CGATCCTCTCTTTGTCCTCCTCTGCTGTGGTTGGGGTTGTCCGCATaGGTGTGGGCATGGGCAGGACCAGAGGTTGGGTTCCTCCATCGT | + |
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Preference number: 1 (lower is better) Translates to: RSSLCPPLLWLGLSA*VWAWAGPEVGFLHR Trigger: ACGATGGAGGAACCCAACCTCTGGTCCTGCCCATGCCCACACTCATGCGGACAACCCCAACCACAGCAGAGGAGGACAAAGAGAGGATCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200387.2 |
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| 3UTR CCA 90 bp | GCAAGTCGGTCCTTACCTCATCTGCCCAGATGTTGCAACCAGAGCTaGAGGGCAAACTTGGTTCCAGCGCCGATCCTCTCTTTGTCCTCC | + |
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Preference number: 1 (lower is better) Translates to: ASRSLPHLPRCCNQS*RANLVPAPILSLSS Trigger: GGAGGACAAAGAGAGGATCGGCGCTGGAACCAAGTTTGCCCTCCAGCTCTGGTTGCAACATCTGGGCAGATGAGGTAAGGACCGACTTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200387.2 |
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| 3UTR TCA 90 bp | GTAGGGCCTCTCCTTCCATCTCGAAGGACATCCCAGGTCTTGGGTTaGCAGGCTTCCTTTGCTGGTCTGTGGTCTGTGTGGACGTCACTT | + |
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Preference number: 1 (lower is better) Translates to: VGPLLPSRRTSQVLG*QASFAGLWSVWTSL Trigger: AAGTGACGTCCACACAGACCACAGACCAGCAAAGGAAGCCTGTCAACCCAAGACCTGGGATGTCCTTCGAGATGGAAGGAGAGGCCCTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171249.6 ENSMUST00000200387.2 |
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| 3UTR CCA 90 bp | GTTGGGGTTGTCCGCATGAGTGTGGGCATGGGCAGGACCAGAGGTTaGGTTCCTCCATCGTCCTTCAGTTCGGTTGCACTGGATTATAAC | + |
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Preference number: 1 (lower is better) Translates to: VGVVRMSVGMGRTRG*VPPSSFSSVALDYN Trigger: GTTATAATCCAGTGCAACCGAACTGAAGGACGATGGAGGAACCCAACCTCTGGTCCTGCCCATGCCCACACTCATGCGGACAACCCCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200387.2 |
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| 3UTR CCA 90 bp | TACCTCATCTGCCCAGATGTTGCAACCAGAGCTGGAGGGCAAACTTaGTTCCAGCGCCGATCCTCTCTTTGTCCTCCTCTGCTGTGGTTG | + |
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Preference number: 1 (lower is better) Translates to: YLICPDVATRAGGQT*FQRRSSLCPPLLWL Trigger: CAACCACAGCAGAGGAGGACAAAGAGAGGATCGGCGCTGGAACCAAGTTTGCCCTCCAGCTCTGGTTGCAACATCTGGGCAGATGAGGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200387.2 |
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| 3UTR GCA 90 bp | CTGGTACCAAGACTATGCTACCCGCAAGTCGGTCCTTACCTCATCTaGCCAGATGTTGCAACCAGAGCTGGAGGGCAAACTTGGTTCCAG | + |
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Preference number: 1 (lower is better) Translates to: LVPRLCYPQVGPYLI*PDVATRAGGQTWFQ Trigger: CTGGAACCAAGTTTGCCCTCCAGCTCTGGTTGCAACATCTGGGCAGATGAGGTAAGGACCGACTTGCGGGTAGCATAGTCTTGGTACCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200387.2 |
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| 3UTR GCA 90 bp | TCCATCTCGAAGGACATCCCAGGTCTTGGGTTGACAGGCTTCCTTTaGTGGTCTGTGGTCTGTGTGGACGTCACTTTTACCTGGGAGGGA | + |
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Preference number: 1 (lower is better) Translates to: SISKDIPGLGLTGFL*WSVVCVDVTFTWEG Trigger: TCCCTCCCAGGTAAAAGTGACGTCCACACAGACCACAGACCAGCAAAGGAAGCCTGTCAACCCAAGACCTGGGATGTCCTTCGAGATGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200387.2 |
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| 3UTR CCA 90 bp | CACGTGCACCATGGTTTTGCACGTGGAAGTCAGAGGGCAGCTTTATaGAGTAGGGCCTCTCCTTCCATCTCGAAGGACATCCCAGGTCTT | + |
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Preference number: 1 (lower is better) Translates to: HVHHGFARGSQRAAL*SRASPSISKDIPGL Trigger: AAGACCTGGGATGTCCTTCGAGATGGAAGGAGAGGCCCTACTCCATAAAGCTGCCCTCTGACTTCCACGTGCAAAACCATGGTGCACGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171249.6 ENSMUST00000200387.2 |
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| 3UTR GCA 90 bp | GAAAAGTCCGGGTGTCCTTGTCCCATCCTCTGTGGCAACCACAGCTaGCGCTACATCTGGTCCCAGCCACATAAAAGCATTCACCTCATT | + |
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Preference number: 1 (lower is better) Translates to: EKSGCPCPILCGNHS*RYIWSQPHKSIHLI Trigger: AATGAGGTGAATGCTTTTATGTGGCTGGGACCAGATGTAGCGGCAGCTGTGGTTGCCACAGAGGATGGGACAAGGACACCCGGACTTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200387.2 |
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| 3UTR CCA 90 bp | AGTCCACACTCTTCCCAGAGCTCTCGAAATCCACACTCCAGTATCTaGAAGTCAAAGGGAGCCGGTCAGAGTATCCAAAGCTCAACCTAC | + |
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Preference number: 1 (lower is better) Translates to: SPHSSQSSRNPHSSI*KSKGAGQSIQSSTY Trigger: GTAGGTTGAGCTTTGGATACTCTGACCGGCTCCCTTTGACTTCCAGATACTGGAGTGTGGATTTCGAGAGCTCTGGGAAGAGTGTGGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200387.2 |
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| 3UTR CCA 90 bp | TGTCCTTGTCCCATCCTCTGTGGCAACCACAGCTGCCGCTACATCTaGTCCCAGCCACATAAAAGCATTCACCTCATTTGGGTTTACTTG | + |
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Preference number: 1 (lower is better) Translates to: CPCPILCGNHSCRYI*SQPHKSIHLIWVYL Trigger: CAAGTAAACCCAAATGAGGTGAATGCTTTTATGTGGCTGGGACCAGATGTAGCGGCAGCTGTGGTTGCCACAGAGGATGGGACAAGGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200387.2 |
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| 3UTR CCA 90 bp | TGCCGCTACATCTGGTCCCAGCCACATAAAAGCATTCACCTCATTTaGGTTTACTTGGATCCTGGCCTGGGGTCAGACATGTTGATTCTT | + |
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Preference number: 1 (lower is better) Translates to: CRYIWSQPHKSIHLI*VYLDPGLGSDMLIL Trigger: AAGAATCAACATGTCTGACCCCAGGCCAGGATCCAAGTAAACCCAAATGAGGTGAATGCTTTTATGTGGCTGGGACCAGATGTAGCGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200387.2 |
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| 3UTR CCA 90 bp | GGACCAGAGGTTGGGTTCCTCCATCGTCCTTCAGTTCGGTTGCACTaGATTATAACAGTTTCTGTCTGGGTTGTGCCTTGTAGCTTACAA | + |
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Preference number: 1 (lower is better) Translates to: GPEVGFLHRPSVRLH*IITVSVWVVPCSLQ Trigger: TTGTAAGCTACAAGGCACAACCCAGACAGAAACTGTTATAATCCAGTGCAACCGAACTGAAGGACGATGGAGGAACCCAACCTCTGGTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200387.2 |
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| 3UTR GCA 90 bp | CTGGGAGGGAGTGTGGGCATTCGCACAAGCATAGCCAAGAGCAGTTaGTTTCTCTTTGTTTCTTTGATGTCCCTAAAAACATCATCTGGT | + |
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Preference number: 1 (lower is better) Translates to: LGGSVGIRTSIAKSS*FLFVSLMSLKTSSG Trigger: ACCAGATGATGTTTTTAGGGACATCAAAGAAACAAAGAGAAAGCAACTGCTCTTGGCTATGCTTGTGCGAATGCCCACACTCCCTCCCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200387.2 |
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| 3UTR TCA 90 bp | AGTATATTGAGCCGTTTAATCCTCCCAAGTATTGCAGAAGGCAAGTaGGTGTTAACCTCACTTGACAGAAAGGAAACACATTCAAGGAGG | + |
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Preference number: 1 (lower is better) Translates to: SILSRLILPSIAEGK*VLTSLDRKETHSRR Trigger: CCTCCTTGAATGTGTTTCCTTTCTGTCAAGTGAGGTTAACACTCACTTGCCTTCTGCAATACTTGGGAGGATTAAACGGCTCAATATACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200387.2 |
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| 3UTR CAA 90 bp | AACCAGAGCTGGAGGGCAAACTTGGTTCCAGCGCCGATCCTCTCTTaGTCCTCCTCTGCTGTGGTTGGGGTTGTCCGCATGAGTGTGGGC | + |
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Preference number: 2 (lower is better) Translates to: NQSWRANLVPAPILS*SSSAVVGVVRMSVG Trigger: GCCCACACTCATGCGGACAACCCCAACCACAGCAGAGGAGGACAAAGAGAGGATCGGCGCTGGAACCAAGTTTGCCCTCCAGCTCTGGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200387.2 |
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| 3UTR CAA 90 bp | ACCAGACAGAGAGTGGTAGGTCCTGGGAGAAAAGTCCGGGTGTCCTaGTCCCATCCTCTGTGGCAACCACAGCTGCCGCTACATCTGGTC | + |
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Preference number: 2 (lower is better) Translates to: TRQRVVGPGRKVRVS*SHPLWQPQLPLHLV Trigger: GACCAGATGTAGCGGCAGCTGTGGTTGCCACAGAGGATGGGACAAGGACACCCGGACTTTTCTCCCAGGACCTACCACTCTCTGTCTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200387.2 |
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| 3UTR-3UTR CCA 90 bp | TCTTTGTCCTCCTCTGCTGTGGTTGGGGTTGTCCGCATGAGTGTGGGCATGGGCCAGAGGGCAGCTTTATaGAGTAGGGCCTCTCCTTCC | + |
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Preference number: 2 (lower is better) Translates to: SLSSSAVVGVVRMSVGMGQRAAL*SRASPS Trigger: GGAAGGAGAGGCCCTACTCCATAAAGCTGCCCTCTG...GCCCATGCCCACACTCATGCGGACAACCCCAACCACAGCAGAGGAGGACAAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200387.2 |
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| 3UTR CAA 90 bp | GACTATGCTACCCGCAAGTCGGTCCTTACCTCATCTGCCCAGATGTaGCAACCAGAGCTGGAGGGCAAACTTGGTTCCAGCGCCGATCCT | + |
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Preference number: 2 (lower is better) Translates to: DYATRKSVLTSSAQM*QPELEGKLGSSADP Trigger: AGGATCGGCGCTGGAACCAAGTTTGCCCTCCAGCTCTGGTTGCAACATCTGGGCAGATGAGGTAAGGACCGACTTGCGGGTAGCATAGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200387.2 |
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| 3UTR CAA 90 bp | AGTAGGGCCTCTCCTTCCATCTCGAAGGACATCCCAGGTCTTGGGTaGACAGGCTTCCTTTGCTGGTCTGTGGTCTGTGTGGACGTCACT | + |
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Preference number: 2 (lower is better) Translates to: SRASPSISKDIPGLG*TGFLCWSVVCVDVT Trigger: AGTGACGTCCACACAGACCACAGACCAGCAAAGGAAGCCTGTCAACCCAAGACCTGGGATGTCCTTCGAGATGGAAGGAGAGGCCCTACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171249.6 ENSMUST00000200387.2 |
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| 3UTR CAA 90 bp | TTACCTCATCTGCCCAGATGTTGCAACCAGAGCTGGAGGGCAAACTaGGTTCCAGCGCCGATCCTCTCTTTGTCCTCCTCTGCTGTGGTT | + |
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Preference number: 2 (lower is better) Translates to: LPHLPRCCNQSWRAN*VPAPILSLSSSAVV Trigger: AACCACAGCAGAGGAGGACAAAGAGAGGATCGGCGCTGGAACCAAGTTTGCCCTCCAGCTCTGGTTGCAACATCTGGGCAGATGAGGTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200387.2 |
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| 3UTR-3UTR TCA 90 bp | TTGCACGTGGAAGTCAGAGGGCAGCTTTATGGAGTAGGGCCTCTCCTTCCATCTTCCCAGGTCTTGGGTTaGCAGGCTTCCTTTGCTGGT | + |
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Preference number: 2 (lower is better) Translates to: LHVEVRGQLYGVGPLLPSSQVLG*QASFAG Trigger: ACCAGCAAAGGAAGCCTGTCAACCCAAGACCTGGGA...AGATGGAAGGAGAGGCCCTACTCCATAAAGCTGCCCTCTGACTTCCACGTGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171249.6 ENSMUST00000200387.2 |
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| 3UTR-3UTR GCA 90 bp | TCCTGGGAGAAAAGTCCGGGTGTCCTTGTCCCATCCTCTGTGGCAACCACAGCTTTGACAGGCTTCCTTTaGTGGTCTGTGGTCTGTGTG | + |
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Preference number: 2 (lower is better) Translates to: SWEKSPGVLVPSSVATTALTGFL*WSVVCV Trigger: CACACAGACCACAGACCAGCAAAGGAAGCCTGTCAA...AGCTGTGGTTGCCACAGAGGATGGGACAAGGACACCCGGACTTTTCTCCCAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200387.2 |
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| 3UTR-3UTR GCA 90 bp | GTGCACCATGGTTTTGCACGTGGAAGTCAGAGGGCAGCTTTATGGAGTAGGGCCTTGACAGGCTTCCTTTaGTGGTCTGTGGTCTGTGTG | + |
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Preference number: 2 (lower is better) Translates to: VHHGFARGSQRAALWSRALTGFL*WSVVCV Trigger: CACACAGACCACAGACCAGCAAAGGAAGCCTGTCAA...GGCCCTACTCCATAAAGCTGCCCTCTGACTTCCACGTGCAAAACCATGGTGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171249.6 ENSMUST00000200387.2 |
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| 3UTR-3UTR CCA 90 bp | ACGTGCACCATGGTTTTGCACGTGGAAGTCAGAGGGCAGCTTTATGGAGTAGGGGGACATCCCAGGTCTTaGGTTGACAGGCTTCCTTTG | + |
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Preference number: 2 (lower is better) Translates to: TCTMVLHVEVRGQLYGVGGHPRS*VDRLPL Trigger: CAAAGGAAGCCTGTCAACCCAAGACCTGGGATGTCC...CCCTACTCCATAAAGCTGCCCTCTGACTTCCACGTGCAAAACCATGGTGCACGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000171249.6 ENSMUST00000200387.2 |
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| 3UTR CAA 90 bp | TGGGCAGGACCAGAGGTTGGGTTCCTCCATCGTCCTTCAGTTCGGTaGCACTGGATTATAACAGTTTCTGTCTGGGTTGTGCCTTGTAGC | + |
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Preference number: 2 (lower is better) Translates to: WAGPEVGFLHRPSVR*HWIITVSVWVVPCS Trigger: GCTACAAGGCACAACCCAGACAGAAACTGTTATAATCCAGTGCAACCGAACTGAAGGACGATGGAGGAACCCAACCTCTGGTCCTGCCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200387.2 |
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| 3UTR-3UTR GCA 90 bp | TCCTTGTCCCATCCTCTGTGGCAACCACAGCTGCCGCTACATCTGGTCCCAGCCTTTAGGAAGACAAAATaGTGGTCCAAAGCCAAAGCA | + |
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Preference number: 2 (lower is better) Translates to: SLSHPLWQPQLPLHLVPAFRKTK*WSKAKA Trigger: TGCTTTGGCTTTGGACCAGCATTTTGTCTTCCTAAA...GGCTGGGACCAGATGTAGCGGCAGCTGTGGTTGCCACAGAGGATGGGACAAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200387.2 |
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| 3UTR-3UTR CCA 90 bp | CACCATGGTTTTGCACGTGGAAGTCAGAGGGCAGCTTTATGGAGTAGGGCCTCTTGTTGCAACCAGAGCTaGAGGGCAAACTTGGTTCCA | + |
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Preference number: 2 (lower is better) Translates to: HHGFARGSQRAALWSRASCCNQS*RANLVP Trigger: TGGAACCAAGTTTGCCCTCCAGCTCTGGTTGCAACA...AGAGGCCCTACTCCATAAAGCTGCCCTCTGACTTCCACGTGCAAAACCATGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200387.2 |
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| 3UTR-3UTR GCA 90 bp | GGGAGGGAGTGTGGGCATTCGCACAAGCATAGCCAAGAGCAGTTGCTTTCTCTTGTTTATTACTGTGTATaGGGGCACGTGCACCATGGT | + |
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Preference number: 2 (lower is better) Translates to: GRECGHSHKHSQEQLLSLVYYCV*GHVHHG Trigger: ACCATGGTGCACGTGCCCGCATACACAGTAATAAAC...AAGAGAAAGCAACTGCTCTTGGCTATGCTTGTGCGAATGCCCACACTCCCTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200387.2 |
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| 3UTR-3UTR CCA 90 bp | GCAGGACCAGAGGTTGGGTTCCTCCATCGTCCTTCAGTTCGGTTGCACTGGATTAGGACACAAGAAAACTaGTTCTTGGGCAGCTGTAGT | + |
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Preference number: 2 (lower is better) Translates to: AGPEVGFLHRPSVRLHWIRTQEN*FLGSCS Trigger: ACTACAGCTGCCCAAGAACCAGTTTTCTTGTGTCCT...AATCCAGTGCAACCGAACTGAAGGACGATGGAGGAACCCAACCTCTGGTCCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200387.2 |
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| 3UTR-3UTR CCA 90 bp | TCTTTGTCCTCCTCTGCTGTGGTTGGGGTTGTCCGCATGAGTGTGGGCATGGGCATAACAGTTTCTGTCTaGGTTGTGCCTTGTAGCTTA | + |
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Preference number: 2 (lower is better) Translates to: SLSSSAVVGVVRMSVGMGITVSV*VVPCSL Trigger: TAAGCTACAAGGCACAACCCAGACAGAAACTGTTAT...GCCCATGCCCACACTCATGCGGACAACCCCAACCACAGCAGAGGAGGACAAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200387.2 |
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| 3UTR-3UTR TCA 90 bp | GGGAGGGAGTGTGGGCATTCGCACAAGCATAGCCAAGAGCAGTTGCTTTCTCTTATTGCAGAAGGCAAGTaGGTGTTAACCTCACTTGAC | + |
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Preference number: 2 (lower is better) Translates to: GRECGHSHKHSQEQLLSLIAEGK*VLTSLD Trigger: GTCAAGTGAGGTTAACACTCACTTGCCTTCTGCAAT...AAGAGAAAGCAACTGCTCTTGGCTATGCTTGTGCGAATGCCCACACTCCCTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200387.2 |
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| 3UTR-3UTR GCA 90 bp | GCAGGACCAGAGGTTGGGTTCCTCCATCGTCCTTCAGTTCGGTTGCACTGGATTAATCCTCCCAAGTATTaGAGAAGGCAAGTGAGTGTT | + |
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Preference number: 2 (lower is better) Translates to: AGPEVGFLHRPSVRLHWINPPKY*RRQVSV Trigger: AACACTCACTTGCCTTCTGCAATACTTGGGAGGATT...AATCCAGTGCAACCGAACTGAAGGACGATGGAGGAACCCAACCTCTGGTCCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200387.2 |
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| 3UTR-3UTR CCA 90 bp | CACCATGGTTTTGCACGTGGAAGTCAGAGGGCAGCTTTATGGAGTAGGGCCTCTAAGAAAACTGGTTCTTaGGCAGCTGTAGTCCACACT | + |
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Preference number: 2 (lower is better) Translates to: HHGFARGSQRAALWSRASKKTGS*AAVVHT Trigger: AGTGTGGACTACAGCTGCCCAAGAACCAGTTTTCTT...AGAGGCCCTACTCCATAAAGCTGCCCTCTGACTTCCACGTGCAAAACCATGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200387.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGGCTTCCTTTGCTGGTCTGTGGTCTGTGTGGACGTCACTTTTACCTGGGAGCCTAAAAACATCATCTaGTACCAAGACTATGCTACC | + |
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Preference number: 2 (lower is better) Translates to: TGFLCWSVVCVDVTFTWEPKNII*YQDYAT Trigger: GGTAGCATAGTCTTGGTACCAGATGATGTTTTTAGG...CTCCCAGGTAAAAGTGACGTCCACACAGACCACAGACCAGCAAAGGAAGCCTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000200387.2 |
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| 3UTR-3UTR CCA 90 bp | AAACCGACTATCTTTGAGACTTTGTTAAGAGGCTTTAGGAAGACAAAATGCTGGCGGGCACGTGCACCATaGTTTTGCACGTGGAAGTCA | + |
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Preference number: 2 (lower is better) Translates to: KPTIFETLLRGFRKTKCWRARAP*FCTWKS Trigger: TGACTTCCACGTGCAAAACCATGGTGCACGTGCCCG...CCAGCATTTTGTCTTCCTAAAGCCTCTTAACAAAGTCTCAAAGATAGTCGGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200387.2 |
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| 3UTR-3UTR CCA 90 bp | CGCATGCTTATGTATGTATGTCATATGCTGATAGCTAAAGGAAAAGTTCTCACCTCATTTGGGTTTACTTaGATCCTGGCCTGGGGTCAG | + |
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Preference number: 2 (lower is better) Translates to: RMLMYVCHMLIAKGKVLTSFGFT*ILAWGQ Trigger: CTGACCCCAGGCCAGGATCCAAGTAAACCCAAATGA...GGTGAGAACTTTTCCTTTAGCTATCAGCATATGACATACATACATAAGCATGCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200387.2 |
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| 3UTR CAA 90 bp | ATTCGCACAAGCATAGCCAAGAGCAGTTGCTTTCTCTTTGTTTCTTaGATGTCCCTAAAAACATCATCTGGTACCAAGACTATGCTACCC | + |
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Preference number: 2 (lower is better) Translates to: IRTSIAKSSCFLFVS*MSLKTSSGTKTMLP Trigger: GGGTAGCATAGTCTTGGTACCAGATGATGTTTTTAGGGACATCAAAGAAACAAAGAGAAAGCAACTGCTCTTGGCTATGCTTGTGCGAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200387.2 |
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| 3UTR CCA 72 bp | GCCAGATGTCCCGTCTTCCCTACCGCCAAGCCTACCTaGAGCTGCTCCTGGGACTCCTGGGAGATCACGAGT | + |
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Preference number: 3 (lower is better) Translates to: ARCPVFPTAKPT*SCSWDSWEITS Trigger: ACTCGTGATCTCCCAGGAGTCCCAGGAGCAGCTCCAGGTAGGCTTGGCGGTAGGGAAGACGGGACATCTGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200387.2 |
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| 3UTR-3UTR CAA 90 bp | TACCGCCAAGCCTACCTGGAGCTGCTCCTGGGACTCCTGGGAGATCACGAGTACATCCCAGGTCTTGGGTaGACAGGCTTCCTTTGCTGG | + |
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Preference number: 3 (lower is better) Translates to: YRQAYLELLLGLLGDHEYIPGLG*TGFLCW Trigger: CCAGCAAAGGAAGCCTGTCAACCCAAGACCTGGGAT...GTACTCGTGATCTCCCAGGAGTCCCAGGAGCAGCTCCAGGTAGGCTTGGCGGTA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200387.2 |
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| 3UTR GCA 72 bp | CTTGGTTCCAGCGCCGATCCTCTCTTTGTCCTCCTCTaGTGTGGTTGGGGTTGTCCGCATGAGTGTGGGCAT | + |
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Preference number: 3 (lower is better) Translates to: LGSSADPLFVLL*CGWGCPHECGH Trigger: ATGCCCACACTCATGCGGACAACCCCAACCACAGCAGAGGAGGACAAAGAGAGGATCGGCGCTGGAACCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200387.2 |
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| 3UTR-3UTR CAA 90 bp | TCCTTGTCCCATCCTCTGTGGCAACCACAGCTGCCGCTACATCTGGTCCCAGCCCAAGAAAACTGGTTCTaGGGCAGCTGTAGTCCACAC | + |
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Preference number: 3 (lower is better) Translates to: SLSHPLWQPQLPLHLVPAQENWF*GSCSPH Trigger: GTGTGGACTACAGCTGCCCAAGAACCAGTTTTCTTG...GGCTGGGACCAGATGTAGCGGCAGCTGTGGTTGCCACAGAGGATGGGACAAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200387.2 |
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| 3UTR TCA 72 bp | CCTGGGACTCCTGGGAGATCACGAGTACGTAGAGAATaGGGTGATGGTATTTGGGGAAGCCCCAGCTCAGCC | + |
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Preference number: 3 (lower is better) Translates to: PGTPGRSRVRRE*GDGIWGSPSSA Trigger: GGCTGAGCTGGGGCTTCCCCAAATACCATCACCTCATTCTCTACGTACTCGTGATCTCCCAGGAGTCCCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200387.2 |
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| 3UTR CCA 72 bp | GGCCTCTCCTTCCATCTCGAAGGACATCCCAGGTCTTaGGTTGACAGGCTTCCTTTGCTGGTCTGTGGTCTG | + |
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Preference number: 3 (lower is better) Translates to: GLSFHLEGHPRS*VDRLPLLVCGL Trigger: CAGACCACAGACCAGCAAAGGAAGCCTGTCAACCCAAGACCTGGGATGTCCTTCGAGATGGAAGGAGAGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171249.6 ENSMUST00000200387.2 |
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| 3UTR TCA 72 bp | CTCCTTCCATCTCGAAGGACATCCCAGGTCTTGGGTTaGCAGGCTTCCTTTGCTGGTCTGTGGTCTGTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: LLPSRRTSQVLG*QASFAGLWSVW Trigger: CCACACAGACCACAGACCAGCAAAGGAAGCCTGTCAACCCAAGACCTGGGATGTCCTTCGAGATGGAAGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171249.6 ENSMUST00000200387.2 |
||
| 3UTR GCA 72 bp | GGGTGTCCTTGTCCCATCCTCTGTGGCAACCACAGCTaGCGCTACATCTGGTCCCAGCCACATAAAAGCATT | + |
|
Preference number: 3 (lower is better) Translates to: GCPCPILCGNHS*RYIWSQPHKSI Trigger: AATGCTTTTATGTGGCTGGGACCAGATGTAGCGGCAGCTGTGGTTGCCACAGAGGATGGGACAAGGACACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200387.2 |
||
| 3UTR GCA 72 bp | AGACTATGCTACCCGCAAGTCGGTCCTTACCTCATCTaGCCAGATGTTGCAACCAGAGCTGGAGGGCAAACT | + |
|
Preference number: 3 (lower is better) Translates to: RLCYPQVGPYLI*PDVATRAGGQT Trigger: AGTTTGCCCTCCAGCTCTGGTTGCAACATCTGGGCAGATGAGGTAAGGACCGACTTGCGGGTAGCATAGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200387.2 |
||
| 3UTR CCA 72 bp | AGTGCCCAAGGCAGGCAAGGATTATTCAATGGGCTTTaGGGGTCGTTCTGTCTCACCTCCCATAACCCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: SAQGRQGLFNGL*GSFCLTSHNPR Trigger: TCTGGGGTTATGGGAGGTGAGACAGAACGACCCCCAAAGCCCATTGAATAATCCTTGCCTGCCTTGGGCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200387.2 |
||
| 3UTR GCA 72 bp | AAGGACATCCCAGGTCTTGGGTTGACAGGCTTCCTTTaGTGGTCTGTGGTCTGTGTGGACGTCACTTTTACC | + |
|
Preference number: 3 (lower is better) Translates to: KDIPGLGLTGFL*WSVVCVDVTFT Trigger: GGTAAAAGTGACGTCCACACAGACCACAGACCAGCAAAGGAAGCCTGTCAACCCAAGACCTGGGATGTCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029742.9 ENSMUST00000171249.6 ENSMUST00000200387.2 |
||
| 3UTR CCA 72 bp | CATGGTTTTGCACGTGGAAGTCAGAGGGCAGCTTTATaGAGTAGGGCCTCTCCTTCCATCTCGAAGGACATC | + |
|
Preference number: 3 (lower is better) Translates to: HGFARGSQRAAL*SRASPSISKDI Trigger: GATGTCCTTCGAGATGGAAGGAGAGGCCCTACTCCATAAAGCTGCCCTCTGACTTCCACGTGCAAAACCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171249.6 ENSMUST00000200387.2 |
||
| 3UTR CCA 72 bp | AGGAAAAGTTCTCACCAGACAGAGAGTGGTAGGTCCTaGGAGAAAAGTCCGGGTGTCCTTGTCCCATCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: RKSSHQTESGRS*EKSPGVLVPSS Trigger: AGAGGATGGGACAAGGACACCCGGACTTTTCTCCCAGGACCTACCACTCTCTGTCTGGTGAGAACTTTTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200387.2 |
||
| 3UTR-3UTR CAA 90 bp | ACTTTTTCCCAGTGCCCAAGGCAGGCAAGGATTATTCAATGGGCTTTGGGGGTCGTTGACAGGCTTCCTTaGCTGGTCTGTGGTCTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: TFSQCPRQARIIQWALGVVDRLP*LVCGLC Trigger: ACACAGACCACAGACCAGCAAAGGAAGCCTGTCAAC...GACCCCCAAAGCCCATTGAATAATCCTTGCCTGCCTTGGGCACTGGGAAAAAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000200387.2 |
||
| 3UTR GCA 72 bp | ACTTGGGGACTCCAGTCCATCCACACTTTTTCCCAGTaGCCAAGGCAGGCAAGGATTATTCAATGGGCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: TWGLQSIHTFSQ*PRQARIIQWAL Trigger: CAAAGCCCATTGAATAATCCTTGCCTGCCTTGGGCACTGGGAAAAAGTGTGGATGGACTGGAGTCCCCAAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000200387.2 |
||
| 3UTR CCA 72 bp | TCTTCCCAGAGCTCTCGAAATCCACACTCCAGTATCTaGAAGTCAAAGGGAGCCGGTCAGAGTATCCAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: SSQSSRNPHSSI*KSKGAGQSIQS Trigger: GCTTTGGATACTCTGACCGGCTCCCTTTGACTTCCAGATACTGGAGTGTGGATTTCGAGAGCTCTGGGAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200387.2 |
||
| 3UTR-3UTR CAA 90 bp | CGCATGCTTATGTATGTATGTCATATGCTGATAGCTAAAGGAAAAGTTCTCACCGCAGGGCAGGGCAGCTaGGTGCTTGATTCCCTCCCC | + |
|
Preference number: 3 (lower is better) Translates to: RMLMYVCHMLIAKGKVLTAGQGS*VLDSLP Trigger: GGGGAGGGAATCAAGCACCAAGCTGCCCTGCCCTGC...GGTGAGAACTTTTCCTTTAGCTATCAGCATATGACATACATACATAAGCATGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200387.2 |
||
| 3UTR CCA 72 bp | ATCTGGTCCCAGCCACATAAAAGCATTCACCTCATTTaGGTTTACTTGGATCCTGGCCTGGGGTCAGACATG | + |
|
Preference number: 3 (lower is better) Translates to: IWSQPHKSIHLI*VYLDPGLGSDM Trigger: CATGTCTGACCCCAGGCCAGGATCCAAGTAAACCCAAATGAGGTGAATGCTTTTATGTGGCTGGGACCAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200387.2 |
||
| 3UTR CCA 72 bp | AAGTGTTTATTACTGTGTATGCGGGCACGTGCACCATaGTTTTGCACGTGGAAGTCAGAGGGCAGCTTTATG | + |
|
Preference number: 3 (lower is better) Translates to: KCLLLCMRARAP*FCTWKSEGSFM Trigger: CATAAAGCTGCCCTCTGACTTCCACGTGCAAAACCATGGTGCACGTGCCCGCATACACAGTAATAAACACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171249.6 ENSMUST00000200387.2 |
||
| 3UTR CCA 72 bp | GTTGGGTTCCTCCATCGTCCTTCAGTTCGGTTGCACTaGATTATAACAGTTTCTGTCTGGGTTGTGCCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: VGFLHRPSVRLH*IITVSVWVVPC Trigger: ACAAGGCACAACCCAGACAGAAACTGTTATAATCCAGTGCAACCGAACTGAAGGACGATGGAGGAACCCAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200387.2 |
||
| 3UTR GCA 72 bp | ACATTTAAAGTGTTTATTACTGTGTATGCGGGCACGTaGACCATGGTTTTGCACGTGGAAGTCAGAGGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: TFKVFITVYAGT*TMVLHVEVRGQ Trigger: CTGCCCTCTGACTTCCACGTGCAAAACCATGGTGCACGTGCCCGCATACACAGTAATAAACACTTTAAATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171249.6 ENSMUST00000200387.2 |
||
| 3UTR CCA 72 bp | TCTCTTTGTTTCTTTGATGTCCCTAAAAACATCATCTaGTACCAAGACTATGCTACCCGCAAGTCGGTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: SLCFFDVPKNII*YQDYATRKSVL Trigger: AAGGACCGACTTGCGGGTAGCATAGTCTTGGTACCAGATGATGTTTTTAGGGACATCAAAGAAACAAAGAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200387.2 |
||
| 3UTR CCA 72 bp | TCAGTTCGGTTGCACTGGATTATAACAGTTTCTGTCTaGGTTGTGCCTTGTAGCTTACAACGAACTTTAGTA | + |
|
Preference number: 3 (lower is better) Translates to: SVRLHWIITVSV*VVPCSLQRTLV Trigger: TACTAAAGTTCGTTGTAAGCTACAAGGCACAACCCAGACAGAAACTGTTATAATCCAGTGCAACCGAACTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200387.2 |
||
| CDS-3UTR CCA 90 bp | GGACATCCCAGGTCTTGGGTTGACAGGCTTCCTTTGCTGGTCTGTGGTCTGTGTGCCTGGAGCTGCTCCTaGGACTCCTGGGAGATCACG | + |
|
Preference number: 4 (lower is better) Translates to: GHPRSWVDRLPLLVCGLCAWSCS*DSWEIT Trigger: CGTGATCTCCCAGGAGTCCCAGGAGCAGCTCCAGGC...ACACAGACCACAGACCAGCAAAGGAAGCCTGTCAACCCAAGACCTGGGATGTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029742.9 ENSMUST00000171249.6 |
||
| CDS-3UTR TCA 90 bp | GCACGTGGAAGTCAGAGGGCAGCTTTATGGAGTAGGGCCTCTCCTTCCATCTCGGTCTGGTCACTGGACTaGAGAATGACCGCCACACCC | + |
|
Preference number: 4 (lower is better) Translates to: ARGSQRAALWSRASPSISVWSLD*RMTATP Trigger: GGGTGTGGCGGTCATTCTTCAGTCCAGTGACCAGAC...CGAGATGGAAGGAGAGGCCCTACTCCATAAAGCTGCCCTCTGACTTCCACGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171249.6 ENSMUST00000200387.2 |
||
| CDS-3UTR TCA 90 bp | AGGTCTTGGGTTGACAGGCTTCCTTTGCTGGTCTGTGGTCTGTGTGGACGTCACTTGGGGTTGTCCGCATaGGTGTGGGCATGGGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RSWVDRLPLLVCGLCGRHLGLSA*VWAWAG Trigger: TCCTGCCCATGCCCACACTCATGCGGACAACCCCAA...GTGACGTCCACACAGACCACAGACCAGCAAAGGAAGCCTGTCAACCCAAGACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029742.9 ENSMUST00000171249.6 |
||
| CDS-3UTR CCA 90 bp | CCCAGGTCTTGGGTTGACAGGCTTCCTTTGCTGGTCTGTGGTCTGTGTGGACGTGACCCCATTCTCCAGTaGGCAGAGGAAGTCTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PRSWVDRLPLLVCGLCGRDPILQ*AEEVWR Trigger: CCTCCAGACTTCCTCTGCCCACTGGAGAATGGGGTC...ACGTCCACACAGACCACAGACCAGCAAAGGAAGCCTGTCAACCCAAGACCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029742.9 |
||
| CDS-3UTR CCA 90 bp | GGCACGTGCACCATGGTTTTGCACGTGGAAGTCAGAGGGCAGCTTTATGGAGTAGCCTGGAGCTGCTCCTaGGACTCCTGGGAGATCACG | + |
|
Preference number: 4 (lower is better) Translates to: GTCTMVLHVEVRGQLYGVAWSCS*DSWEIT Trigger: CGTGATCTCCCAGGAGTCCCAGGAGCAGCTCCAGGC...TACTCCATAAAGCTGCCCTCTGACTTCCACGTGCAAAACCATGGTGCACGTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171249.6 |
||
| CDS-3UTR CCA 90 bp | CATCCCAGGTCTTGGGTTGACAGGCTTCCTTTGCTGGTCTGTGGTCTGTGTGGAACTTGGATCCTGGCCTaGAGCTGCTCCTGGGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: HPRSWVDRLPLLVCGLCGTWILA*SCSWDS Trigger: GGAGTCCCAGGAGCAGCTCCAGGCCAGGATCCAAGT...TCCACACAGACCACAGACCAGCAAAGGAAGCCTGTCAACCCAAGACCTGGGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029742.9 ENSMUST00000171249.6 |
||
| CDS-3UTR CCA 90 bp | CTCGAAGGACATCCCAGGTCTTGGGTTGACAGGCTTCCTTTGCTGGTCTGTGGTACTTGGATCCTGGCCTaGAGCTGCTCCTGGGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: LEGHPRSWVDRLPLLVCGTWILA*SCSWDS Trigger: GGAGTCCCAGGAGCAGCTCCAGGCCAGGATCCAAGT...ACCACAGACCAGCAAAGGAAGCCTGTCAACCCAAGACCTGGGATGTCCTTCGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029742.9 ENSMUST00000171249.6 |
||
| CDS-3UTR CCA 90 bp | CCCAGGTCTTGGGTTGACAGGCTTCCTTTGCTGGTCTGTGGTCTGTGTGGACGTGGTTTACTTGGATCCTaGCCTGGAGCTGCTCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PRSWVDRLPLLVCGLCGRGLLGS*PGAAPG Trigger: CCCAGGAGCAGCTCCAGGCCAGGATCCAAGTAAACC...ACGTCCACACAGACCACAGACCAGCAAAGGAAGCCTGTCAACCCAAGACCTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029742.9 ENSMUST00000171249.6 |
||
| 3UTR CAA 72 bp | TGGAGGGCAAACTTGGTTCCAGCGCCGATCCTCTCTTaGTCCTCCTCTGCTGTGGTTGGGGTTGTCCGCATG | + |
|
Preference number: 4 (lower is better) Translates to: WRANLVPAPILS*SSSAVVGVVRM Trigger: CATGCGGACAACCCCAACCACAGCAGAGGAGGACAAAGAGAGGATCGGCGCTGGAACCAAGTTTGCCCTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200387.2 |
||
| CDS-3UTR TCA 90 bp | GACATCCCAGGTCTTGGGTTGACAGGCTTCCTTTGCTGGTCTGTGGTCTGTGTGGTCTGGTCACTGGACTaGAGAATGACCGCCACACCC | + |
|
Preference number: 4 (lower is better) Translates to: DIPGLGLTGFLCWSVVCVVWSLD*RMTATP Trigger: GGGTGTGGCGGTCATTCTTCAGTCCAGTGACCAGAC...CACACAGACCACAGACCAGCAAAGGAAGCCTGTCAACCCAAGACCTGGGATGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029742.9 ENSMUST00000171249.6 ENSMUST00000200387.2 |
||
| CDS-3UTR TCA 90 bp | CTCTCCTTCCATCTCGAAGGACATCCCAGGTCTTGGGTTGACAGGCTTCCTTTGTTGGGGTTGTCCGCATaGGTGTGGGCATGGGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LSFHLEGHPRSWVDRLPLLGLSA*VWAWAG Trigger: TCCTGCCCATGCCCACACTCATGCGGACAACCCCAA...CAAAGGAAGCCTGTCAACCCAAGACCTGGGATGTCCTTCGAGATGGAAGGAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171249.6 |
||
| CDS-3UTR GCA 90 bp | GGTCTTGGGTTGACAGGCTTCCTTTGCTGGTCTGTGGTCTGTGTGGACGTCACTTCATCAGGTTCCATGTaGCCACCTGGAGGGACCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GLGLTGFLCWSVVCVDVTSSGSM*PPGGTH Trigger: GTGGGTCCCTCCAGGTGGGCACATGGAACCTGATGA...AGTGACGTCCACACAGACCACAGACCAGCAAAGGAAGCCTGTCAACCCAAGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171249.6 ENSMUST00000200387.2 |
||
| CDS-3UTR GCA 90 bp | GACATCCCAGGTCTTGGGTTGACAGGCTTCCTTTGCTGGTCTGTGGTCTGTGTGTCATCAGGTTCCATGTaGCCACCTGGAGGGACCCAC | + |
|
Preference number: 4 (lower is better) Translates to: DIPGLGLTGFLCWSVVCVSSGSM*PPGGTH Trigger: GTGGGTCCCTCCAGGTGGGCACATGGAACCTGATGA...CACACAGACCACAGACCAGCAAAGGAAGCCTGTCAACCCAAGACCTGGGATGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171249.6 ENSMUST00000200387.2 |
||
| CDS-3UTR CCA 90 bp | GGTCTTGGGTTGACAGGCTTCCTTTGCTGGTCTGTGGTCTGTGTGGACGTCACTGAGGGACCCACAGATTaGGGGAAATGCGGAGAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: GLGLTGFLCWSVVCVDVTEGPTD*GKCGEC Trigger: GCACTCTCCGCATTTCCCCCAATCTGTGGGTCCCTC...AGTGACGTCCACACAGACCACAGACCAGCAAAGGAAGCCTGTCAACCCAAGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029742.9 ENSMUST00000171249.6 ENSMUST00000200387.2 |
||
| CDS-3UTR CCA 90 bp | CCCAGGTCTTGGGTTGACAGGCTTCCTTTGCTGGTCTGTGGTCTGTGTGGACGTGAGAGTGGTAGGTCCTaGGAGAAAAGTCCGGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: PRSWVDRLPLLVCGLCGRESGRS*EKSPGV Trigger: GACACCCGGACTTTTCTCCCAGGACCTACCACTCTC...ACGTCCACACAGACCACAGACCAGCAAAGGAAGCCTGTCAACCCAAGACCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029742.9 ENSMUST00000171249.6 |
||
| CDS-3UTR CCA 90 bp | ATCCCAGGTCTTGGGTTGACAGGCTTCCTTTGCTGGTCTGTGGTCTGTGTGGACGGCAGGACCAGAGGTTaGGTTCCTCCATCGTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: IPGLGLTGFLCWSVVCVDGRTRG*VPPSSF Trigger: GAAGGACGATGGAGGAACCCAACCTCTGGTCCTGCC...GTCCACACAGACCACAGACCAGCAAAGGAAGCCTGTCAACCCAAGACCTGGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029742.9 ENSMUST00000171249.6 |
||
| CDS-3UTR CCA 90 bp | GGTCTTGGGTTGACAGGCTTCCTTTGCTGGTCTGTGGTCTGTGTGGACGTCACTGGCAGGACCAGAGGTTaGGTTCCTCCATCGTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GLGLTGFLCWSVVCVDVTGRTRG*VPPSSF Trigger: GAAGGACGATGGAGGAACCCAACCTCTGGTCCTGCC...AGTGACGTCCACACAGACCACAGACCAGCAAAGGAAGCCTGTCAACCCAAGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029742.9 ENSMUST00000171249.6 |
||
| CDS-3UTR CCA 90 bp | ATCCCAGGTCTTGGGTTGACAGGCTTCCTTTGCTGGTCTGTGGTCTGTGTGGACGCTGGAGGGCAAACTTaGTTCCAGCGCCGATCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: IPGLGLTGFLCWSVVCVDAGGQT*FQRRSS Trigger: AGAGGATCGGCGCTGGAACCAAGTTTGCCCTCCAGC...GTCCACACAGACCACAGACCAGCAAAGGAAGCCTGTCAACCCAAGACCTGGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029742.9 ENSMUST00000171249.6 |
||
| CDS-3UTR TCA 90 bp | TCGAAGGACATCCCAGGTCTTGGGTTGACAGGCTTCCTTTGCTGGTCTGTGGTCCACTGGACTGAAGAATaGCCGCCACACCCAGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: SKDIPGLGLTGFLCWSVVHWTEE*PPHPDP Trigger: TGGATCTGGGTGTGGCGGTCATTCTTCAGTCCAGTG...GACCACAGACCAGCAAAGGAAGCCTGTCAACCCAAGACCTGGGATGTCCTTCGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029742.9 ENSMUST00000171249.6 ENSMUST00000200387.2 |
||
| CDS-3UTR TCA 90 bp | CAGGCTTCCTTTGCTGGTCTGTGGTCTGTGTGGACGTCACTTTTACCTGGGAGGCACTGGACTGAAGAATaGCCGCCACACCCAGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: QASFAGLWSVWTSLLPGRHWTEE*PPHPDP Trigger: TGGATCTGGGTGTGGCGGTCATTCTTCAGTCCAGTG...CCTCCCAGGTAAAAGTGACGTCCACACAGACCACAGACCAGCAAAGGAAGCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200387.2 |
||
| CDS-3UTR CCA 90 bp | GACATCCCAGGTCTTGGGTTGACAGGCTTCCTTTGCTGGTCTGTGGTCTGTGTGCGAAGCGCCGGGGAATaGATTGCTAGAGAGGACAAG | + |
|
Preference number: 4 (lower is better) Translates to: DIPGLGLTGFLCWSVVCVRSAGE*IAREDK Trigger: CTTGTCCTCTCTAGCAATCCATTCCCCGGCGCTTCG...CACACAGACCACAGACCAGCAAAGGAAGCCTGTCAACCCAAGACCTGGGATGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029742.9 ENSMUST00000171249.6 ENSMUST00000200387.2 |
||
| CDS-3UTR CCA 90 bp | GGTTTTGCACGTGGAAGTCAGAGGGCAGCTTTATGGAGTAGGGCCTCTCCTTCCCGAAGCGCCGGGGAATaGATTGCTAGAGAGGACAAG | + |
|
Preference number: 4 (lower is better) Translates to: GFARGSQRAALWSRASPSRSAGE*IAREDK Trigger: CTTGTCCTCTCTAGCAATCCATTCCCCGGCGCTTCG...GGAAGGAGAGGCCCTACTCCATAAAGCTGCCCTCTGACTTCCACGTGCAAAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000171249.6 ENSMUST00000200387.2 |
||
| CDS-3UTR CCA 90 bp | ACCATGGTTTTGCACGTGGAAGTCAGAGGGCAGCTTTATGGAGTAGGGCCTCTCGAGGGACCCACAGATTaGGGGAAATGCGGAGAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: TMVLHVEVRGQLYGVGPLEGPTD*GKCGEC Trigger: GCACTCTCCGCATTTCCCCCAATCTGTGGGTCCCTC...GAGAGGCCCTACTCCATAAAGCTGCCCTCTGACTTCCACGTGCAAAACCATGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000171249.6 ENSMUST00000200387.2 |
||
| CDS-3UTR CCA 90 bp | AGGTCTTGGGTTGACAGGCTTCCTTTGCTGGTCTGTGGTCTGTGTGGACGTCACTTGTCCCATCCTCTGTaGCAACCACAGCTGCCGCTA | + |
|
Preference number: 4 (lower is better) Translates to: RSWVDRLPLLVCGLCGRHLSHPL*QPQLPL Trigger: TAGCGGCAGCTGTGGTTGCCACAGAGGATGGGACAA...GTGACGTCCACACAGACCACAGACCAGCAAAGGAAGCCTGTCAACCCAAGACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029742.9 ENSMUST00000171249.6 |
||
| CDS-3UTR CCA 90 bp | CATCCCAGGTCTTGGGTTGACAGGCTTCCTTTGCTGGTCTGTGGTCTGTGTGGATTGTCCCATCCTCTGTaGCAACCACAGCTGCCGCTA | + |
|
Preference number: 4 (lower is better) Translates to: HPRSWVDRLPLLVCGLCGLSHPL*QPQLPL Trigger: TAGCGGCAGCTGTGGTTGCCACAGAGGATGGGACAA...TCCACACAGACCACAGACCAGCAAAGGAAGCCTGTCAACCCAAGACCTGGGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029742.9 ENSMUST00000171249.6 |
||
| CDS-3UTR CCA 90 bp | CACCATGGTTTTGCACGTGGAAGTCAGAGGGCAGCTTTATGGAGTAGGGCCTCTGCTGGAGGGCAAACTTaGTTCCAGCGCCGATCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: HHGFARGSQRAALWSRASAGGQT*FQRRSS Trigger: AGAGGATCGGCGCTGGAACCAAGTTTGCCCTCCAGC...AGAGGCCCTACTCCATAAAGCTGCCCTCTGACTTCCACGTGCAAAACCATGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171249.6 |
||
| CDS-3UTR CCA 90 bp | CTGTGTATGCGGGCACGTGCACCATGGTTTTGCACGTGGAAGTCAGAGGGCAGCCAGAAAAGAGGTCTCTaGATTGGAAGCCTCTCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: LCMRARAPWFCTWKSEGSQKRGL*IGSLSE Trigger: TTCGGAGAGGCTTCCAATCCAGAGACCTCTTTTCTG...GCTGCCCTCTGACTTCCACGTGCAAAACCATGGTGCACGTGCCCGCATACACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171249.6 |
||
| CDS-3UTR CCA 90 bp | ATGGTTTTGCACGTGGAAGTCAGAGGGCAGCTTTATGGAGTAGGGCCTCTCCTTGAGGGACCCACAGATTaGGGGAAATGCGGAGAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: MVLHVEVRGQLYGVGPLLEGPTD*GKCGEC Trigger: GCACTCTCCGCATTTCCCCCAATCTGTGGGTCCCTC...AAGGAGAGGCCCTACTCCATAAAGCTGCCCTCTGACTTCCACGTGCAAAACCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000171249.6 ENSMUST00000200387.2 |
||
| CDS-3UTR CCA 90 bp | CTTGGGTTGACAGGCTTCCTTTGCTGGTCTGTGGTCTGTGTGGACGTCACTTTTGGTTTACTTGGATCCTaGCCTGGAGCTGCTCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LGLTGFLCWSVVCVDVTFGLLGS*PGAAPG Trigger: CCCAGGAGCAGCTCCAGGCCAGGATCCAAGTAAACC...AAAAGTGACGTCCACACAGACCACAGACCAGCAAAGGAAGCCTGTCAACCCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029742.9 ENSMUST00000171249.6 |
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| CDS-3UTR CCA 90 bp | GCAGCTTTATGGAGTAGGGCCTCTCCTTCCATCTCGAAGGACATCCCAGGTCTTGAGAGTGGTAGGTCCTaGGAGAAAAGTCCGGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: AALWSRASPSISKDIPGLESGRS*EKSPGV Trigger: GACACCCGGACTTTTCTCCCAGGACCTACCACTCTC...AAGACCTGGGATGTCCTTCGAGATGGAAGGAGAGGCCCTACTCCATAAAGCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171249.6 |
||
| 3UTR CAA 72 bp | TCTCCTTCCATCTCGAAGGACATCCCAGGTCTTGGGTaGACAGGCTTCCTTTGCTGGTCTGTGGTCTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SPSISKDIPGLG*TGFLCWSVVCV Trigger: CACACAGACCACAGACCAGCAAAGGAAGCCTGTCAACCCAAGACCTGGGATGTCCTTCGAGATGGAAGGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171249.6 ENSMUST00000200387.2 |
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| 3UTR CAA 72 bp | TGGGTTTACTTGGATCCTGGCCTGGGGTCAGACATGTaGATTCTTCACTTAAGGGAGAGGCCACAGGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: WVYLDPGLGSDM*ILHLRERPQVG Trigger: CCCCACCTGTGGCCTCTCCCTTAAGTGAAGAATCAACATGTCTGACCCCAGGCCAGGATCCAAGTAAACCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200387.2 |
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| CDS-3UTR TCA 90 bp | ATGGTTTTGCACGTGGAAGTCAGAGGGCAGCTTTATGGAGTAGGGCCTCTCCTTCACTGGACTGAAGAATaGCCGCCACACCCAGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: MVLHVEVRGQLYGVGPLLHWTEE*PPHPDP Trigger: TGGATCTGGGTGTGGCGGTCATTCTTCAGTCCAGTG...AAGGAGAGGCCCTACTCCATAAAGCTGCCCTCTGACTTCCACGTGCAAAACCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171249.6 ENSMUST00000200387.2 |
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| CDS-3UTR GCA 90 bp | AGGGCAGCTTTATGGAGTAGGGCCTCTCCTTCCATCTCGAAGGACATCCCAGGTACAGATTGGGGGAAATaGGGAGAGTGCATGTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RAALWSRASPSISKDIPGTDWGK*GECMSF Trigger: GAAGGACATGCACTCTCCGCATTTCCCCCAATCTGT...ACCTGGGATGTCCTTCGAGATGGAAGGAGAGGCCCTACTCCATAAAGCTGCCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000171249.6 ENSMUST00000200387.2 |
||
| CDS-3UTR GCA 90 bp | GGTCTTGGGTTGACAGGCTTCCTTTGCTGGTCTGTGGTCTGTGTGGACGTCACTACAGATTGGGGGAAATaGGGAGAGTGCATGTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GLGLTGFLCWSVVCVDVTTDWGK*GECMSF Trigger: GAAGGACATGCACTCTCCGCATTTCCCCCAATCTGT...AGTGACGTCCACACAGACCACAGACCAGCAAAGGAAGCCTGTCAACCCAAGACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029742.9 ENSMUST00000171249.6 ENSMUST00000200387.2 |
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| CDS-3UTR CCA 90 bp | AGGTCTTGGGTTGACAGGCTTCCTTTGCTGGTCTGTGGTCTGTGTGGACGTCACTCATTTGGGTTTACTTaGATCCTGGCCTGGAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RSWVDRLPLLVCGLCGRHSFGFT*ILAWSC Trigger: GCAGCTCCAGGCCAGGATCCAAGTAAACCCAAATGA...GTGACGTCCACACAGACCACAGACCAGCAAAGGAAGCCTGTCAACCCAAGACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029742.9 ENSMUST00000171249.6 |
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| CDS-3UTR CCA 90 bp | GGTTTTGCACGTGGAAGTCAGAGGGCAGCTTTATGGAGTAGGGCCTCTCCTTCCTCATTTGGGTTTACTTaGATCCTGGCCTGGAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GFARGSQRAALWSRASPSSFGFT*ILAWSC Trigger: GCAGCTCCAGGCCAGGATCCAAGTAAACCCAAATGA...GGAAGGAGAGGCCCTACTCCATAAAGCTGCCCTCTGACTTCCACGTGCAAAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171249.6 |
||
| CDS-3UTR CCA 90 bp | AGGTCTTGGGTTGACAGGCTTCCTTTGCTGGTCTGTGGTCTGTGTGGACGTCACTGTTGCAACCAGAGCTaGAGGGCAAACTTGGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RSWVDRLPLLVCGLCGRHCCNQS*RANLVP Trigger: TGGAACCAAGTTTGCCCTCCAGCTCTGGTTGCAACA...GTGACGTCCACACAGACCACAGACCAGCAAAGGAAGCCTGTCAACCCAAGACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029742.9 ENSMUST00000171249.6 |
||
| CDS-3UTR TCA 90 bp | GACATCCCAGGTCTTGGGTTGACAGGCTTCCTTTGCTGGTCTGTGGTCTGTGTGCGAGTACGTAGAGAATaGGGTGATGGTATTTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: DIPGLGLTGFLCWSVVCVRVRRE*GDGIWG Trigger: TCCCCAAATACCATCACCTCATTCTCTACGTACTCG...CACACAGACCACAGACCAGCAAAGGAAGCCTGTCAACCCAAGACCTGGGATGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029742.9 ENSMUST00000171249.6 |
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| CDS-3UTR TCA 90 bp | TCGAAGGACATCCCAGGTCTTGGGTTGACAGGCTTCCTTTGCTGGTCTGTGGTCCGAGTACGTAGAGAATaGGGTGATGGTATTTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SKDIPGLGLTGFLCWSVVRVRRE*GDGIWG Trigger: TCCCCAAATACCATCACCTCATTCTCTACGTACTCG...GACCACAGACCAGCAAAGGAAGCCTGTCAACCCAAGACCTGGGATGTCCTTCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029742.9 ENSMUST00000171249.6 |
||
| CDS-3UTR CCA 90 bp | AGGTCTTGGGTTGACAGGCTTCCTTTGCTGGTCTGTGGTCTGTGTGGACGTCACCAGAAAAGAGGTCTCTaGATTGGAAGCCTCTCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: RSWVDRLPLLVCGLCGRHQKRGL*IGSLSE Trigger: TTCGGAGAGGCTTCCAATCCAGAGACCTCTTTTCTG...GTGACGTCCACACAGACCACAGACCAGCAAAGGAAGCCTGTCAACCCAAGACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029742.9 ENSMUST00000171249.6 |
||
| CDS-3UTR CCA 90 bp | CCAGGTCTTGGGTTGACAGGCTTCCTTTGCTGGTCTGTGGTCTGTGTGGACGTCAAGAAAACTGGTTCTTaGGCAGCTGTAGTCCACACT | + |
|
Preference number: 4 (lower is better) Translates to: PGLGLTGFLCWSVVCVDVKKTGS*AAVVHT Trigger: AGTGTGGACTACAGCTGCCCAAGAACCAGTTTTCTT...GACGTCCACACAGACCACAGACCAGCAAAGGAAGCCTGTCAACCCAAGACCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029742.9 ENSMUST00000171249.6 |
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| CDS-3UTR CCA 90 bp | CCAGGTCTTGGGTTGACAGGCTTCCTTTGCTGGTCTGTGGTCTGTGTGGACGTCAGGACACAAGAAAACTaGTTCTTGGGCAGCTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: PGLGLTGFLCWSVVCVDVRTQEN*FLGSCS Trigger: ACTACAGCTGCCCAAGAACCAGTTTTCTTGTGTCCT...GACGTCCACACAGACCACAGACCAGCAAAGGAAGCCTGTCAACCCAAGACCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029742.9 ENSMUST00000171249.6 |
||
| CDS-3UTR CCA 90 bp | CTTTATGGAGTAGGGCCTCTCCTTCCATCTCGAAGGACATCCCAGGTCTTGGGTTGTTGCAACCAGAGCTaGAGGGCAAACTTGGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LYGVGPLLPSRRTSQVLGCCNQS*RANLVP Trigger: TGGAACCAAGTTTGCCCTCCAGCTCTGGTTGCAACA...ACCCAAGACCTGGGATGTCCTTCGAGATGGAAGGAGAGGCCCTACTCCATAAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171249.6 |
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| CDS-3UTR GCA 90 bp | TGGGTTGACAGGCTTCCTTTGCTGGTCTGTGGTCTGTGTGGACGTCACTTTTACACAGATTGGGGGAAATaGGGAGAGTGCATGTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: WVDRLPLLVCGLCGRHFYTDWGK*GECMSF Trigger: GAAGGACATGCACTCTCCGCATTTCCCCCAATCTGT...GTAAAAGTGACGTCCACACAGACCACAGACCAGCAAAGGAAGCCTGTCAACCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029742.9 ENSMUST00000171249.6 ENSMUST00000200387.2 |
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| CDS-3UTR CCA 90 bp | TCGAAGGACATCCCAGGTCTTGGGTTGACAGGCTTCCTTTGCTGGTCTGTGGTCAAGAAAACTGGTTCTTaGGCAGCTGTAGTCCACACT | + |
|
Preference number: 4 (lower is better) Translates to: SKDIPGLGLTGFLCWSVVKKTGS*AAVVHT Trigger: AGTGTGGACTACAGCTGCCCAAGAACCAGTTTTCTT...GACCACAGACCAGCAAAGGAAGCCTGTCAACCCAAGACCTGGGATGTCCTTCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029742.9 ENSMUST00000171249.6 |
||
| CDS-3UTR CCA 90 bp | ATCCCAGGTCTTGGGTTGACAGGCTTCCTTTGCTGGTCTGTGGTCTGTGTGGACAGGACACAAGAAAACTaGTTCTTGGGCAGCTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: IPGLGLTGFLCWSVVCVDRTQEN*FLGSCS Trigger: ACTACAGCTGCCCAAGAACCAGTTTTCTTGTGTCCT...GTCCACACAGACCACAGACCAGCAAAGGAAGCCTGTCAACCCAAGACCTGGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029742.9 ENSMUST00000171249.6 |
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| CDS-3UTR CCA 90 bp | CTCGAAGGACATCCCAGGTCTTGGGTTGACAGGCTTCCTTTGCTGGTCTGTGGTAGCATTCACCTCATTTaGGTTTACTTGGATCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LEGHPRSWVDRLPLLVCGSIHLI*VYLDPG Trigger: GCCAGGATCCAAGTAAACCCAAATGAGGTGAATGCT...ACCACAGACCAGCAAAGGAAGCCTGTCAACCCAAGACCTGGGATGTCCTTCGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029742.9 ENSMUST00000171249.6 |
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| CDS-3UTR CCA 90 bp | TCTTGGGTTGACAGGCTTCCTTTGCTGGTCTGTGGTCTGTGTGGACGTCACTTTAGCATTCACCTCATTTaGGTTTACTTGGATCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SWVDRLPLLVCGLCGRHFSIHLI*VYLDPG Trigger: GCCAGGATCCAAGTAAACCCAAATGAGGTGAATGCT...AAAGTGACGTCCACACAGACCACAGACCAGCAAAGGAAGCCTGTCAACCCAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029742.9 ENSMUST00000171249.6 |
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| 3UTR CAA 72 bp | TTTATTACTGTGTATGCGGGCACGTGCACCATGGTTTaGCACGTGGAAGTCAGAGGGCAGCTTTATGGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: FITVYAGTCTMV*HVEVRGQLYGV Trigger: TACTCCATAAAGCTGCCCTCTGACTTCCACGTGCAAAACCATGGTGCACGTGCCCGCATACACAGTAATAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171249.6 ENSMUST00000200387.2 |
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| CDS-3UTR CCA 90 bp | AAACCGACTATCTTTGAGACTTTGTTAAGAGGCTTTAGGAAGACAAAATGCTGGCGAAGCGCCGGGGAATaGATTGCTAGAGAGGACAAG | + |
|
Preference number: 4 (lower is better) Translates to: KPTIFETLLRGFRKTKCWRSAGE*IAREDK Trigger: CTTGTCCTCTCTAGCAATCCATTCCCCGGCGCTTCG...CCAGCATTTTGTCTTCCTAAAGCCTCTTAACAAAGTCTCAAAGATAGTCGGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200387.2 |
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| CDS TCA 90 bp | CTGCCCCGCACCCAGGAGTCCACACACGCTCTGTGTGAAGCTCACTaGCTCCAGGCGCCCGGCGAGGCGCAACAGCAACCGTGCGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LPRTQESTHALCEAH*LQAPGEAQQQPCGS Trigger: GCTGCCGCACGGTTGCTGTTGCGCCTCGCCGGGCGCCTGGAGTCAGTGAGCTTCACACAGAGCGTGTGTGGACTCCTGGGTGCGGGGCAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029742.9 ENSMUST00000171249.6 ENSMUST00000200387.2 |
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| CDS GCA 90 bp | TTGCTAGAGAGGACAAGCTGTCCTCGCTCCAAGCTGCAATGCGTGTaGCACGGCCCGGGTCTCTGCCCCGCACCCAGGAGTCCACACACG | + |
|
Preference number: 5 (lower is better) Translates to: LLERTSCPRSKLQCV*HGPGLCPAPRSPHT Trigger: CGTGTGTGGACTCCTGGGTGCGGGGCAGAGACCCGGGCCGTGGCACACGCATTGCAGCTTGGAGCGAGGACAGCTTGTCCTCTCTAGCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029742.9 ENSMUST00000171249.6 ENSMUST00000200387.2 |
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| CDS GCA 90 bp | AATGGATTGCTAGAGAGGACAAGCTGTCCTCGCTCCAAGCTGCAATaGGTGTGCCACGGCCCGGGTCTCTGCCCCGCACCCAGGAGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: NGLLERTSCPRSKLQ*VCHGPGLCPAPRSP Trigger: TGGACTCCTGGGTGCGGGGCAGAGACCCGGGCCGTGGCACACGCATTGCAGCTTGGAGCGAGGACAGCTTGTCCTCTCTAGCAATCCATT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029742.9 ENSMUST00000171249.6 ENSMUST00000200387.2 |
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| CDS GCA 90 bp | TCTTGGTTGGGTCGGCAGGCCGGTACCTCCTCATCAGGTTCCATGTaGCCACCTGGAGGGACCCACAGATTGGGGGAAATGCGGAGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: SWLGRQAGTSSSGSM*PPGGTHRLGEMRRV Trigger: CACTCTCCGCATTTCCCCCAATCTGTGGGTCCCTCCAGGTGGGCACATGGAACCTGATGAGGAGGTACCGGCCTGCCGACCCAACCAAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200387.2 |
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| CDS CCA 90 bp | GGAGACCTCAGGCTGGATTGGAAGCCTCTCCGAAGCGCCGGGGAATaGATTGCTAGAGAGGACAAGCTGTCCTCGCTCCAAGCTGCAATG | + |
|
Preference number: 5 (lower is better) Translates to: GDLRLDWKPLRSAGE*IAREDKLSSLQAAM Trigger: CATTGCAGCTTGGAGCGAGGACAGCTTGTCCTCTCTAGCAATCCATTCCCCGGCGCTTCGGAGAGGCTTCCAATCCAGCCTGAGGTCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200387.2 |
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| CDS-3UTR CAA 90 bp | TTACTGTGTATGCGGGCACGTGCACCATGGTTTTGCACGTGGAAGTCAGAGGGCGTGAGCGGCTCTGTCTaGGAGACCTCAGGCTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LLCMRARAPWFCTWKSEGVSGSV*ETSGCW Trigger: CCAGCAGCCTGAGGTCTCCAAGACAGAGCCGCTCAC...GCCCTCTGACTTCCACGTGCAAAACCATGGTGCACGTGCCCGCATACACAGTAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171249.6 |
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| CDS GCA 90 bp | CCAGTGGGCAGAGGAAGTCTGGAGGGACCCACAGATTGGGGGAAATaGGGAGAGTGCATGTCCTTCGGGTCAACAGTACAGTCTGGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: PVGRGSLEGPTDWGK*GECMSFGSTVQSGH Trigger: GTGACCAGACTGTACTGTTGACCCGAAGGACATGCACTCTCCGCATTTCCCCCAATCTGTGGGTCCCTCCAGACTTCCTCTGCCCACTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029742.9 |
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| CDS CCA 90 bp | CCCCATTCTCCAGTGGGCAGAGGAAGTCTGGAGGGACCCACAGATTaGGGGAAATGCGGAGAGTGCATGTCCTTCGGGTCAACAGTACAG | + |
|
Preference number: 5 (lower is better) Translates to: PHSPVGRGSLEGPTD*GKCGECMSFGSTVQ Trigger: CTGTACTGTTGACCCGAAGGACATGCACTCTCCGCATTTCCCCCAATCTGTGGGTCCCTCCAGACTTCCTCTGCCCACTGGAGAATGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029742.9 |
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| CDS CCA 90 bp | TTGTCTTCCACCAGGGACCCCATTCTCCAGTGGGCAGAGGAAGTCTaGAGGGACCCACAGATTGGGGGAAATGCGGAGAGTGCATGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LSSTRDPILQWAEEV*RDPQIGGNAESACP Trigger: AGGACATGCACTCTCCGCATTTCCCCCAATCTGTGGGTCCCTCCAGACTTCCTCTGCCCACTGGAGAATGGGGTCCCTGGTGGAAGACAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029742.9 |
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| CDS CCA 90 bp | GTTGGGGTTGTCCGCATGAGTGTGGGCATGGGCAGGACCAGAGGTTaGGTTCCTCCATCGTCCTTCAGTTCGGTTGCACAGACAGAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: VGVVRMSVGMGRTRG*VPPSSFSSVAQTES Trigger: ACTCTCTGTCTGTGCAACCGAACTGAAGGACGATGGAGGAACCCAACCTCTGGTCCTGCCCATGCCCACACTCATGCGGACAACCCCAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029742.9 ENSMUST00000171249.6 |
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| CDS CCA 90 bp | CCTCCTCATCAGGTTCCATGTGCCCACCTGGAGGGACCCACAGATTaGGGGAAATGCGGAGAGTGCATGTCCTTCGGGTCAACAGTACAG | + |
|
Preference number: 5 (lower is better) Translates to: PPHQVPCAHLEGPTD*GKCGECMSFGSTVQ Trigger: CTGTACTGTTGACCCGAAGGACATGCACTCTCCGCATTTCCCCCAATCTGTGGGTCCCTCCAGGTGGGCACATGGAACCTGATGAGGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200387.2 |
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| CDS-3UTR CAA 90 bp | AAGGACATCCCAGGTCTTGGGTTGACAGGCTTCCTTTGCTGGTCTGTGGTCTGTGTGAGCGGCTCTGTCTaGGAGACCTCAGGCTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: KDIPGLGLTGFLCWSVVCVSGSV*ETSGCW Trigger: CCAGCAGCCTGAGGTCTCCAAGACAGAGCCGCTCAC...ACAGACCACAGACCAGCAAAGGAAGCCTGTCAACCCAAGACCTGGGATGTCCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029742.9 ENSMUST00000171249.6 |
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| CDS-3UTR CAA 90 bp | CTCGAAGGACATCCCAGGTCTTGGGTTGACAGGCTTCCTTTGCTGGTCTGTGGTGGGCAGGACCAGAGGTaGGGTTCCTCCATCGTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: LEGHPRSWVDRLPLLVCGGQDQR*GSSIVL Trigger: AAGGACGATGGAGGAACCCAACCTCTGGTCCTGCCC...ACCACAGACCAGCAAAGGAAGCCTGTCAACCCAAGACCTGGGATGTCCTTCGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029742.9 ENSMUST00000171249.6 |
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| CDS-3UTR CAA 90 bp | GGACATCCCAGGTCTTGGGTTGACAGGCTTCCTTTGCTGGTCTGTGGTCTGTGTAGCTGGAGGGCAAACTaGGTTCCAGCGCCGATCCTC | + |
|
Preference number: 5 (lower is better) Translates to: GHPRSWVDRLPLLVCGLCSWRAN*VPAPIL Trigger: GAGGATCGGCGCTGGAACCAAGTTTGCCCTCCAGCT...ACACAGACCACAGACCAGCAAAGGAAGCCTGTCAACCCAAGACCTGGGATGTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029742.9 ENSMUST00000171249.6 |
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| CDS GCA 90 bp | TGTGCCCACCTGGAGGGACCCACAGATTGGGGGAAATGCGGAGAGTaGATGTCCTTCGGGTCAACAGTACAGTCTGGTCACTGGACTGAA | + |
|
Preference number: 5 (lower is better) Translates to: CAHLEGPTDWGKCGE*MSFGSTVQSGHWTE Trigger: TTCAGTCCAGTGACCAGACTGTACTGTTGACCCGAAGGACATGCACTCTCCGCATTTCCCCCAATCTGTGGGTCCCTCCAGGTGGGCACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000171249.6 ENSMUST00000200387.2 |
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| CDS CCA 90 bp | CCATCGTCCTTCAGTTCGGTTGCACAGACAGAGAGTGGTAGGTCCTaGGAGAAAAGTCCGGGTGTCCTTGTCCCATCCTCTGTGGCAACC | + |
|
Preference number: 5 (lower is better) Translates to: PSSFSSVAQTESGRS*EKSPGVLVPSSVAT Trigger: GGTTGCCACAGAGGATGGGACAAGGACACCCGGACTTTTCTCCCAGGACCTACCACTCTCTGTCTGTGCAACCGAACTGAAGGACGATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029742.9 ENSMUST00000171249.6 |
||
| CDS CCA 90 bp | TCTCCTCATCAGGTTCCATGTGCCCACCTGGAGGGACCCACAGATTaGGGGAAATGCGGAGAGTGCATGTCCTTCGGGTCAACAGTACAG | + |
|
Preference number: 5 (lower is better) Translates to: SPHQVPCAHLEGPTD*GKCGECMSFGSTVQ Trigger: CTGTACTGTTGACCCGAAGGACATGCACTCTCCGCATTTCCCCCAATCTGTGGGTCCCTCCAGGTGGGCACATGGAACCTGATGAGGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171249.6 |
||
| CDS-3UTR CAA 90 bp | AGGTCTTGGGTTGACAGGCTTCCTTTGCTGGTCTGTGGTCTGTGTGGACGTCACGCGCCGGGGAATGGATaGCTAGAGAGGACAAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: RSWVDRLPLLVCGLCGRHAPGNG*LERTSC Trigger: ACAGCTTGTCCTCTCTAGCAATCCATTCCCCGGCGC...GTGACGTCCACACAGACCACAGACCAGCAAAGGAAGCCTGTCAACCCAAGACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029742.9 ENSMUST00000171249.6 ENSMUST00000200387.2 |
||
| CDS-3UTR CAA 90 bp | TACTGTGTATGCGGGCACGTGCACCATGGTTTTGCACGTGGAAGTCAGAGGGCAGCGCCGGGGAATGGATaGCTAGAGAGGACAAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: YCVCGHVHHGFARGSQRAAPGNG*LERTSC Trigger: ACAGCTTGTCCTCTCTAGCAATCCATTCCCCGGCGC...TGCCCTCTGACTTCCACGTGCAAAACCATGGTGCACGTGCCCGCATACACAGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000171249.6 ENSMUST00000200387.2 |
||
| CDS-3UTR CAA 90 bp | CTCGAAGGACATCCCAGGTCTTGGGTTGACAGGCTTCCTTTGCTGGTCTGTGGTTCATCTGCCCAGATGTaGCAACCAGAGCTGGAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: LEGHPRSWVDRLPLLVCGSSAQM*QPELEG Trigger: GCCCTCCAGCTCTGGTTGCAACATCTGGGCAGATGA...ACCACAGACCAGCAAAGGAAGCCTGTCAACCCAAGACCTGGGATGTCCTTCGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029742.9 ENSMUST00000171249.6 |
||
| CDS TCA 90 bp | CTCGAAATCCACACTCCAGTATCTGCAAGAGGAGTGGGCCCAATGTaGACGGTTGTTGTCTTCCACCAGGGACCCCATTCTCCAGTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: LEIHTPVSARGVGPM*TVVVFHQGPHSPVG Trigger: GCCCACTGGAGAATGGGGTCCCTGGTGGAAGACAACAACCGTTCACATTGGGCCCACTCCTCTTGCAGATACTGGAGTGTGGATTTCGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029742.9 |
||
| CDS GCA 90 bp | AGCTCTCGAAATCCACACTCCAGTATCTCCTCATCAGGTTCCATGTaGCCACCTGGAGGGACCCACAGATTGGGGGAAATGCGGAGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: SSRNPHSSISSSGSM*PPGGTHRLGEMRRV Trigger: CACTCTCCGCATTTCCCCCAATCTGTGGGTCCCTCCAGGTGGGCACATGGAACCTGATGAGGAGATACTGGAGTGTGGATTTCGAGAGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171249.6 |
||
| CDS CCA 90 bp | GAAAAGAGGTCTCTGGATTGGAAGCCTCTCCGAAGCGCCGGGGAATaGATTGCTAGAGAGGACAAGCTGTCCTCGCTCCAAGCTGCAATG | + |
|
Preference number: 5 (lower is better) Translates to: EKRSLDWKPLRSAGE*IAREDKLSSLQAAM Trigger: CATTGCAGCTTGGAGCGAGGACAGCTTGTCCTCTCTAGCAATCCATTCCCCGGCGCTTCGGAGAGGCTTCCAATCCAGAGACCTCTTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029742.9 ENSMUST00000171249.6 |
||
| CDS-3UTR CAA 90 bp | AGGTCTTGGGTTGACAGGCTTCCTTTGCTGGTCTGTGGTCTGTGTGGACGTCACAAAGTCCGGGTGTCCTaGTCCCATCCTCTGTGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: RSWVDRLPLLVCGLCGRHKVRVS*SHPLWQ Trigger: TTGCCACAGAGGATGGGACAAGGACACCCGGACTTT...GTGACGTCCACACAGACCACAGACCAGCAAAGGAAGCCTGTCAACCCAAGACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029742.9 ENSMUST00000171249.6 |
||
| CDS-3UTR CAA 90 bp | GAAGGACATCCCAGGTCTTGGGTTGACAGGCTTCCTTTGCTGGTCTGTGGTCTGAAAGTCCGGGTGTCCTaGTCCCATCCTCTGTGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: EGHPRSWVDRLPLLVCGLKVRVS*SHPLWQ Trigger: TTGCCACAGAGGATGGGACAAGGACACCCGGACTTT...CAGACCACAGACCAGCAAAGGAAGCCTGTCAACCCAAGACCTGGGATGTCCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029742.9 ENSMUST00000171249.6 |
||
| CDS-3UTR CAA 90 bp | CTTGGGTTGACAGGCTTCCTTTGCTGGTCTGTGGTCTGTGTGGACGTCACTTTTGGGCAGGACCAGAGGTaGGGTTCCTCCATCGTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: LGLTGFLCWSVVCVDVTFGQDQR*GSSIVL Trigger: AAGGACGATGGAGGAACCCAACCTCTGGTCCTGCCC...AAAAGTGACGTCCACACAGACCACAGACCAGCAAAGGAAGCCTGTCAACCCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029742.9 ENSMUST00000171249.6 |
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| CDS-3UTR CAA 90 bp | TGGGTTGACAGGCTTCCTTTGCTGGTCTGTGGTCTGTGTGGACGTCACTTTTACAGCTGGAGGGCAAACTaGGTTCCAGCGCCGATCCTC | + |
|
Preference number: 5 (lower is better) Translates to: WVDRLPLLVCGLCGRHFYSWRAN*VPAPIL Trigger: GAGGATCGGCGCTGGAACCAAGTTTGCCCTCCAGCT...GTAAAAGTGACGTCCACACAGACCACAGACCAGCAAAGGAAGCCTGTCAACCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029742.9 ENSMUST00000171249.6 |
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| CDS-3UTR CAA 90 bp | ACGTGCACCATGGTTTTGCACGTGGAAGTCAGAGGGCAGCTTTATGGAGTAGGGTCATCTGCCCAGATGTaGCAACCAGAGCTGGAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: TCTMVLHVEVRGQLYGVGSSAQM*QPELEG Trigger: GCCCTCCAGCTCTGGTTGCAACATCTGGGCAGATGA...CCCTACTCCATAAAGCTGCCCTCTGACTTCCACGTGCAAAACCATGGTGCACGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171249.6 |
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| CDS GCA 90 bp | TCCACACCTCTATTTGTGAGCGGCTCTGTCTTGGAGACCTCAGGCTaGTGGTCCAGAGCCGCAAAAGGGCAGAAAAGAGGTCTCTGGATT | + |
|
Preference number: 5 (lower is better) Translates to: STPLFVSGSVLETSG*WSRAAKGQKRGLWI Trigger: AATCCAGAGACCTCTTTTCTGCCCTTTTGCGGCTCTGGACCAGCAGCCTGAGGTCTCCAAGACAGAGCCGCTCACAAATAGAGGTGTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029742.9 ENSMUST00000171249.6 |
||
| CDS GCA 90 bp | AGAGGAAGTCTGGAGGGACCCACAGATTGGGGGAAATGCGGAGAGTaGATGTCCTTCGGGTCAACAGTACAGTCTGGTCACTGGACTGAA | + |
|
Preference number: 5 (lower is better) Translates to: RGSLEGPTDWGKCGE*MSFGSTVQSGHWTE Trigger: TTCAGTCCAGTGACCAGACTGTACTGTTGACCCGAAGGACATGCACTCTCCGCATTTCCCCCAATCTGTGGGTCCCTCCAGACTTCCTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029742.9 |
||
| CDS CCA 90 bp | ACACCTCTATTTGTGAGCGGCTCTGTCTTGGAGACCTCAGGCTGCTaGTCCAGAGCCGCAAAAGGGCAGAAAAGAGGTCTCTGGATTGGA | + |
|
Preference number: 5 (lower is better) Translates to: TPLFVSGSVLETSGC*SRAAKGQKRGLWIG Trigger: TCCAATCCAGAGACCTCTTTTCTGCCCTTTTGCGGCTCTGGACCAGCAGCCTGAGGTCTCCAAGACAGAGCCGCTCACAAATAGAGGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029742.9 ENSMUST00000171249.6 |
||
| CDS-3UTR CAA 90 bp | ACTTTTTCCCAGTGCCCAAGGCAGGCAAGGATTATTCAATGGGCTTTGGGGGTCGCGCCGGGGAATGGATaGCTAGAGAGGACAAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: TFSQCPRQARIIQWALGVAPGNG*LERTSC Trigger: ACAGCTTGTCCTCTCTAGCAATCCATTCCCCGGCGC...GACCCCCAAAGCCCATTGAATAATCCTTGCCTGCCTTGGGCACTGGGAAAAAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000200387.2 |
||
| CDS-3UTR CAA 90 bp | GGACATCCCAGGTCTTGGGTTGACAGGCTTCCTTTGCTGGTCTGTGGTCTGTGTCTCATTTGGGTTTACTaGGATCCTGGCCTGGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GHPRSWVDRLPLLVCGLCLIWVY*DPGLEL Trigger: CAGCTCCAGGCCAGGATCCAAGTAAACCCAAATGAG...ACACAGACCACAGACCAGCAAAGGAAGCCTGTCAACCCAAGACCTGGGATGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029742.9 ENSMUST00000171249.6 |
||
| CDS-3UTR CAA 90 bp | TTACTGTGTATGCGGGCACGTGCACCATGGTTTTGCACGTGGAAGTCAGAGGGCCAAGAAAACTGGTTCTaGGGCAGCTGTAGTCCACAC | + |
|
Preference number: 5 (lower is better) Translates to: LLCMRARAPWFCTWKSEGQENWF*GSCSPH Trigger: GTGTGGACTACAGCTGCCCAAGAACCAGTTTTCTTG...GCCCTCTGACTTCCACGTGCAAAACCATGGTGCACGTGCCCGCATACACAGTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171249.6 |
||
| CDS-3UTR CAA 90 bp | ACCATGGTTTTGCACGTGGAAGTCAGAGGGCAGCTTTATGGAGTAGGGCCTCTCCTCATTTGGGTTTACTaGGATCCTGGCCTGGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: TMVLHVEVRGQLYGVGPLLIWVY*DPGLEL Trigger: CAGCTCCAGGCCAGGATCCAAGTAAACCCAAATGAG...GAGAGGCCCTACTCCATAAAGCTGCCCTCTGACTTCCACGTGCAAAACCATGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171249.6 |
||
| CDS TCA 90 bp | AGAGTGCATGTCCTTCGGGTCAACAGTACAGTCTGGTCACTGGACTaGAGAATGACCGCCACACCCAGATCCACACCTCTATTTGTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: RVHVLRVNSTVWSLD*RMTATPRSTPLFVS Trigger: GCTCACAAATAGAGGTGTGGATCTGGGTGTGGCGGTCATTCTTCAGTCCAGTGACCAGACTGTACTGTTGACCCGAAGGACATGCACTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029742.9 ENSMUST00000171249.6 ENSMUST00000200387.2 |
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| CDS GCA 90 bp | AGTCCACACTCTTCCCAGAGCTCTCGAAATCCACACTCCAGTATCTaGAAGAGGAGTGGGCCCAATGTGAACGGTTGTTGTCTTCCACCA | + |
|
Preference number: 5 (lower is better) Translates to: SPHSSQSSRNPHSSI*KRSGPNVNGCCLPP Trigger: TGGTGGAAGACAACAACCGTTCACATTGGGCCCACTCCTCTTGCAGATACTGGAGTGTGGATTTCGAGAGCTCTGGGAAGAGTGTGGACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029742.9 |
||
| CDS-3UTR CAA 90 bp | AAGGACATCCCAGGTCTTGGGTTGACAGGCTTCCTTTGCTGGTCTGTGGTCTGTCAAGAAAACTGGTTCTaGGGCAGCTGTAGTCCACAC | + |
|
Preference number: 5 (lower is better) Translates to: KDIPGLGLTGFLCWSVVCQENWF*GSCSPH Trigger: GTGTGGACTACAGCTGCCCAAGAACCAGTTTTCTTG...ACAGACCACAGACCAGCAAAGGAAGCCTGTCAACCCAAGACCTGGGATGTCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029742.9 ENSMUST00000171249.6 |
||
| CDS-3UTR CAA 90 bp | CGGGCACGTGCACCATGGTTTTGCACGTGGAAGTCAGAGGGCAGCTTTATGGAGAAGCATTCACCTCATTaGGGTTTACTTGGATCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RARAPWFCTWKSEGSFMEKHSPH*GLLGSW Trigger: CCAGGATCCAAGTAAACCCAAATGAGGTGAATGCTT...CTCCATAAAGCTGCCCTCTGACTTCCACGTGCAAAACCATGGTGCACGTGCCCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171249.6 |
||
| CDS-3UTR CAA 90 bp | ATCCCAGGTCTTGGGTTGACAGGCTTCCTTTGCTGGTCTGTGGTCTGTGTGGACAAGCATTCACCTCATTaGGGTTTACTTGGATCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: IPGLGLTGFLCWSVVCVDKHSPH*GLLGSW Trigger: CCAGGATCCAAGTAAACCCAAATGAGGTGAATGCTT...GTCCACACAGACCACAGACCAGCAAAGGAAGCCTGTCAACCCAAGACCTGGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029742.9 ENSMUST00000171249.6 |
||
| CDS TCA 72 bp | TCTGCCCCGCACCCAGGAGTCCACACACGCTCTGTGTaGAGCTCACTGACTCCAGGCGCCCGGCGAGGCGCA | + |
|
Preference number: 6 (lower is better) Translates to: SAPHPGVHTRSV*SSLTPGARRGA Trigger: TGCGCCTCGCCGGGCGCCTGGAGTCAGTGAGCTTCACACAGAGCGTGTGTGGACTCCTGGGTGCGGGGCAGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029742.9 ENSMUST00000171249.6 ENSMUST00000200387.2 |
||
| CDS GCA 72 bp | CTAGAGAGGACAAGCTGTCCTCGCTCCAAGCTGCAATaGGTGTGCCACGGCCCGGGTCTCTGCCCCGCACCC | + |
|
Preference number: 6 (lower is better) Translates to: LERTSCPRSKLQ*VCHGPGLCPAP Trigger: GGGTGCGGGGCAGAGACCCGGGCCGTGGCACACGCATTGCAGCTTGGAGCGAGGACAGCTTGTCCTCTCTAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029742.9 ENSMUST00000171249.6 ENSMUST00000200387.2 |
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| CDS TCA 72 bp | ACCCAGGAGTCCACACACGCTCTGTGTGAAGCTCACTaGCTCCAGGCGCCCGGCGAGGCGCAACAGCAACCG | + |
|
Preference number: 6 (lower is better) Translates to: TQESTHALCEAH*LQAPGEAQQQP Trigger: CGGTTGCTGTTGCGCCTCGCCGGGCGCCTGGAGTCAGTGAGCTTCACACAGAGCGTGTGTGGACTCCTGGGT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029742.9 ENSMUST00000171249.6 ENSMUST00000200387.2 |
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| CDS GCA 72 bp | GGTCGGCAGGCCGGTACCTCCTCATCAGGTTCCATGTaGCCACCTGGAGGGACCCACAGATTGGGGGAAATG | + |
|
Preference number: 6 (lower is better) Translates to: GRQAGTSSSGSM*PPGGTHRLGEM Trigger: CATTTCCCCCAATCTGTGGGTCCCTCCAGGTGGGCACATGGAACCTGATGAGGAGGTACCGGCCTGCCGACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200387.2 |
||
| CDS CAA 90 bp | ACCGCCACACCCAGATCCACACCTCTATTTGTGAGCGGCTCTGTCTaGGAGACCTCAGGCTGGATTGGAAGCCTCTCCGAAGCGCCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: TATPRSTPLFVSGSV*ETSGWIGSLSEAPG Trigger: CCCCGGCGCTTCGGAGAGGCTTCCAATCCAGCCTGAGGTCTCCAAGACAGAGCCGCTCACAAATAGAGGTGTGGATCTGGGTGTGGCGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200387.2 |
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| CDS CCA 72 bp | GGCCGGTACCTCCTCATCAGGTTCCATGTGCCCACCTaGAGGGACCCACAGATTGGGGGAAATGCGGAGAGT | + |
|
Preference number: 6 (lower is better) Translates to: GRYLLIRFHVPT*RDPQIGGNAES Trigger: ACTCTCCGCATTTCCCCCAATCTGTGGGTCCCTCCAGGTGGGCACATGGAACCTGATGAGGAGGTACCGGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200387.2 |
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| CDS CCA 72 bp | CCAGTGGGCAGAGGAAGTCTGGAGGGACCCACAGATTaGGGGAAATGCGGAGAGTGCATGTCCTTCGGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: PVGRGSLEGPTD*GKCGECMSFGS Trigger: TGACCCGAAGGACATGCACTCTCCGCATTTCCCCCAATCTGTGGGTCCCTCCAGACTTCCTCTGCCCACTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029742.9 |
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| CDS CCA 72 bp | CGGTTGTTGTCTTCCACCAGGGACCCCATTCTCCAGTaGGCAGAGGAAGTCTGGAGGGACCCACAGATTGGG | + |
|
Preference number: 6 (lower is better) Translates to: RLLSSTRDPILQ*AEEVWRDPQIG Trigger: CCCAATCTGTGGGTCCCTCCAGACTTCCTCTGCCCACTGGAGAATGGGGTCCCTGGTGGAAGACAACAACCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029742.9 |
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| CDS CAA 72 bp | TCCAGTGGGCAGAGGAAGTCTGGAGGGACCCACAGATaGGGGGAAATGCGGAGAGTGCATGTCCTTCGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: SSGQRKSGGTHR*GEMRRVHVLRV Trigger: GACCCGAAGGACATGCACTCTCCGCATTTCCCCCAATCTGTGGGTCCCTCCAGACTTCCTCTGCCCACTGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029742.9 |
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| CDS CAA 72 bp | TCAGGTTCCATGTGCCCACCTGGAGGGACCCACAGATaGGGGGAAATGCGGAGAGTGCATGTCCTTCGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: SGSMCPPGGTHR*GEMRRVHVLRV Trigger: GACCCGAAGGACATGCACTCTCCGCATTTCCCCCAATCTGTGGGTCCCTCCAGGTGGGCACATGGAACCTGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000171249.6 ENSMUST00000200387.2 |
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| CDS CAA 90 bp | GGTTGGGGTTGTCCGCATGAGTGTGGGCATGGGCAGGACCAGAGGTaGGGTTCCTCCATCGTCCTTCAGTTCGGTTGCACAGACAGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: GWGCPHECGHGQDQR*GSSIVLQFGCTDRE Trigger: CTCTCTGTCTGTGCAACCGAACTGAAGGACGATGGAGGAACCCAACCTCTGGTCCTGCCCATGCCCACACTCATGCGGACAACCCCAACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029742.9 ENSMUST00000171249.6 |
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| CDS CAA 90 bp | ACCTCAGGCTGGATTGGAAGCCTCTCCGAAGCGCCGGGGAATGGATaGCTAGAGAGGACAAGCTGTCCTCGCTCCAAGCTGCAATGCGTG | + |
|
Preference number: 6 (lower is better) Translates to: TSGWIGSLSEAPGNG*LERTSCPRSKLQCV Trigger: CACGCATTGCAGCTTGGAGCGAGGACAGCTTGTCCTCTCTAGCAATCCATTCCCCGGCGCTTCGGAGAGGCTTCCAATCCAGCCTGAGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200387.2 |
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| CDS CAA 90 bp | AGAGGTCTCTGGATTGGAAGCCTCTCCGAAGCGCCGGGGAATGGATaGCTAGAGAGGACAAGCTGTCCTCGCTCCAAGCTGCAATGCGTG | + |
|
Preference number: 6 (lower is better) Translates to: RGLWIGSLSEAPGNG*LERTSCPRSKLQCV Trigger: CACGCATTGCAGCTTGGAGCGAGGACAGCTTGTCCTCTCTAGCAATCCATTCCCCGGCGCTTCGGAGAGGCTTCCAATCCAGAGACCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029742.9 ENSMUST00000171249.6 |
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| CDS CAA 90 bp | ACCGCCACACCCAGATCCACACCTCTATTTGTGAGCGGCTCTGTCTaGGAGACCTCAGGCTGCTGGTCCAGAGCCGCAAAAGGGCAGAAA | + |
|
Preference number: 6 (lower is better) Translates to: TATPRSTPLFVSGSV*ETSGCWSRAAKGQK Trigger: TTTCTGCCCTTTTGCGGCTCTGGACCAGCAGCCTGAGGTCTCCAAGACAGAGCCGCTCACAAATAGAGGTGTGGATCTGGGTGTGGCGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029742.9 ENSMUST00000171249.6 |
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| CDS CAA 90 bp | CACAGACAGAGAGTGGTAGGTCCTGGGAGAAAAGTCCGGGTGTCCTaGTCCCATCCTCTGTGGCAACCACAGCTGCCGCTACATCTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: HRQRVVGPGRKVRVS*SHPLWQPQLPLHLV Trigger: GACCAGATGTAGCGGCAGCTGTGGTTGCCACAGAGGATGGGACAAGGACACCCGGACTTTTCTCCCAGGACCTACCACTCTCTGTCTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029742.9 ENSMUST00000171249.6 |
||
| CDS GCA 72 bp | TGTGCCCACCTGGAGGGACCCACAGATTGGGGGAAATaGGGAGAGTGCATGTCCTTCGGGTCAACAGTACAG | + |
|
Preference number: 6 (lower is better) Translates to: CAHLEGPTDWGK*GECMSFGSTVQ Trigger: CTGTACTGTTGACCCGAAGGACATGCACTCTCCGCATTTCCCCCAATCTGTGGGTCCCTCCAGGTGGGCACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000171249.6 ENSMUST00000200387.2 |
||
| CDS CCA 72 bp | AGGCTGGATTGGAAGCCTCTCCGAAGCGCCGGGGAATaGATTGCTAGAGAGGACAAGCTGTCCTCGCTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: RLDWKPLRSAGE*IAREDKLSSLQ Trigger: TTGGAGCGAGGACAGCTTGTCCTCTCTAGCAATCCATTCCCCGGCGCTTCGGAGAGGCTTCCAATCCAGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200387.2 |
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| CDS CAA 72 bp | TGGATTGGAAGCCTCTCCGAAGCGCCGGGGAATGGATaGCTAGAGAGGACAAGCTGTCCTCGCTCCAAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: WIGSLSEAPGNG*LERTSCPRSKL Trigger: CAGCTTGGAGCGAGGACAGCTTGTCCTCTCTAGCAATCCATTCCCCGGCGCTTCGGAGAGGCTTCCAATCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029742.9 ENSMUST00000171249.6 ENSMUST00000200387.2 |
||
| CDS GCA 72 bp | CTGGAGGGACCCACAGATTGGGGGAAATGCGGAGAGTaGATGTCCTTCGGGTCAACAGTACAGTCTGGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: LEGPTDWGKCGE*MSFGSTVQSGH Trigger: GTGACCAGACTGTACTGTTGACCCGAAGGACATGCACTCTCCGCATTTCCCCCAATCTGTGGGTCCCTCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029742.9 ENSMUST00000171249.6 ENSMUST00000200387.2 |
||
| CDS CCA 72 bp | TCTCTGGATTGGAAGCCTCTCCGAAGCGCCGGGGAATaGATTGCTAGAGAGGACAAGCTGTCCTCGCTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: SLDWKPLRSAGE*IAREDKLSSLQ Trigger: TTGGAGCGAGGACAGCTTGTCCTCTCTAGCAATCCATTCCCCGGCGCTTCGGAGAGGCTTCCAATCCAGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029742.9 ENSMUST00000171249.6 |
||
| CDS CCA 72 bp | TTTGTGAGCGGCTCTGTCTTGGAGACCTCAGGCTGCTaGTCCAGAGCCGCAAAAGGGCAGAAAAGAGGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: FVSGSVLETSGC*SRAAKGQKRGL Trigger: GAGACCTCTTTTCTGCCCTTTTGCGGCTCTGGACCAGCAGCCTGAGGTCTCCAAGACAGAGCCGCTCACAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029742.9 ENSMUST00000171249.6 |
||
| CDS CAA 90 bp | ACACTCCAGTATCTGCAAGAGGAGTGGGCCCAATGTGAACGGTTGTaGTCTTCCACCAGGGACCCCATTCTCCAGTGGGCAGAGGAAGTC | + |
|
Preference number: 6 (lower is better) Translates to: TLQYLQEEWAQCERL*SSTRDPILQWAEEV Trigger: GACTTCCTCTGCCCACTGGAGAATGGGGTCCCTGGTGGAAGACAACAACCGTTCACATTGGGCCCACTCCTCTTGCAGATACTGGAGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029742.9 |
||
| CDS GCA 72 bp | AGAGGAAGTCTGGAGGGACCCACAGATTGGGGGAAATaGGGAGAGTGCATGTCCTTCGGGTCAACAGTACAG | + |
|
Preference number: 6 (lower is better) Translates to: RGSLEGPTDWGK*GECMSFGSTVQ Trigger: CTGTACTGTTGACCCGAAGGACATGCACTCTCCGCATTTCCCCCAATCTGTGGGTCCCTCCAGACTTCCTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029742.9 |
||
| CDS CAA 72 bp | TATCTGCAAGAGGAGTGGGCCCAATGTGAACGGTTGTaGTCTTCCACCAGGGACCCCATTCTCCAGTGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: YLQEEWAQCERL*SSTRDPILQWA Trigger: TGCCCACTGGAGAATGGGGTCCCTGGTGGAAGACAACAACCGTTCACATTGGGCCCACTCCTCTTGCAGATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029742.9 |
||
| CDS CAA 72 bp | CAGTATCTGCAAGAGGAGTGGGCCCAATGTGAACGGTaGTTGTCTTCCACCAGGGACCCCATTCTCCAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: QYLQEEWAQCER*LSSTRDPILQW Trigger: CCACTGGAGAATGGGGTCCCTGGTGGAAGACAACAACCGTTCACATTGGGCCCACTCCTCTTGCAGATACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029742.9 |
||
| CDS GCA 72 bp | AATCCACACTCCAGTATCTCCTCATCAGGTTCCATGTaGCCACCTGGAGGGACCCACAGATTGGGGGAAATG | + |
|
Preference number: 6 (lower is better) Translates to: NPHSSISSSGSM*PPGGTHRLGEM Trigger: CATTTCCCCCAATCTGTGGGTCCCTCCAGGTGGGCACATGGAACCTGATGAGGAGATACTGGAGTGTGGATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171249.6 |
||
| CDS CCA 72 bp | TTCAGTTCGGTTGCACAGACAGAGAGTGGTAGGTCCTaGGAGAAAAGTCCGGGTGTCCTTGTCCCATCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: FSSVAQTESGRS*EKSPGVLVPSS Trigger: AGAGGATGGGACAAGGACACCCGGACTTTTCTCCCAGGACCTACCACTCTCTGTCTGTGCAACCGAACTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029742.9 ENSMUST00000171249.6 |
||
| CDS CAA 72 bp | CCAGAGGTTGGGTTCCTCCATCGTCCTTCAGTTCGGTaGCACAGACAGAGAGTGGTAGGTCCTGGGAGAAAA | + |
|
Preference number: 6 (lower is better) Translates to: PEVGFLHRPSVR*HRQRVVGPGRK Trigger: TTTTCTCCCAGGACCTACCACTCTCTGTCTGTGCAACCGAACTGAAGGACGATGGAGGAACCCAACCTCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029742.9 ENSMUST00000171249.6 |
||
| CDS CCA 72 bp | CTCTCGAAATCCACACTCCAGTATCTGCAAGAGGAGTaGGCCCAATGTGAACGGTTGTTGTCTTCCACCAGG | + |
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Preference number: 6 (lower is better) Translates to: LSKSTLQYLQEE*AQCERLLSSTR Trigger: CCTGGTGGAAGACAACAACCGTTCACATTGGGCCCACTCCTCTTGCAGATACTGGAGTGTGGATTTCGAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029742.9 |
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| CDS CCA 72 bp | GCAGACTCCCATAACCCCAGAAGGACACAAGAAAACTaGTTCTTGGGCAGCTGTAGTCCACACTCTTCCCAG | + |
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Preference number: 6 (lower is better) Translates to: ADSHNPRRTQEN*FLGSCSPHSSQ Trigger: CTGGGAAGAGTGTGGACTACAGCTGCCCAAGAACCAGTTTTCTTGTGTCCTTCTGGGGTTATGGGAGTCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029742.9 ENSMUST00000171249.6 |
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| CDS GCA 72 bp | TCTTCCCAGAGCTCTCGAAATCCACACTCCAGTATCTaGAAGAGGAGTGGGCCCAATGTGAACGGTTGTTGT | + |
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Preference number: 6 (lower is better) Translates to: SSQSSRNPHSSI*KRSGPNVNGCC Trigger: ACAACAACCGTTCACATTGGGCCCACTCCTCTTGCAGATACTGGAGTGTGGATTTCGAGAGCTCTGGGAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029742.9 |
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| CDS CCA 72 bp | ATCTGGTCCCAGCCACATAAAAGCATTCACCTCATTTaGGTTTACTTGGATCCTGGCCTGGAGCTGCTCCTG | + |
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Preference number: 6 (lower is better) Translates to: IWSQPHKSIHLI*VYLDPGLELLL Trigger: CAGGAGCAGCTCCAGGCCAGGATCCAAGTAAACCCAAATGAGGTGAATGCTTTTATGTGGCTGGGACCAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029742.9 ENSMUST00000171249.6 |
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